>input_sequence_53217
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------------------------------------------------------------------------ATGAGTAC
ACCGGGCCACCCGCCCGGCCGCTTGTCACACTCGCGCTCCACAGGACACTCCCTCGGCCTCCTCCTCCGCAGCTCTTTCA
CACCACCCCATCC------CACGGTCGACCGAGGTGCGTGCAGAGGCATGAGGGGCTCGCGGTGGTGCTGCTGCTGCTTC
GGCCGGGGCGGCGGCGGCGGGGCCGGGCGGTCGGGGAGCGTGGGCGACGACGGGCTGGTGTGGGACGTGGGCCTCAAGGC
GCACGCCTCCGGCGAGTACTCCGTCGCCGTGGCCCAGGCCAACGAGGCGCTCGAGGACCAGGCGCAGGTGCTCGTCTCCC
CCGCCGCCACGCTCGTCGGCGTCTACGACGGCCACGGCGGCCCCGACGCCGCCCGCTTCGTCAACGCGCGCCTCTTCTCC
CTCATCCAAGGTTCGCCTGCCTCCTACACTCGTTCAACGCGCGCGCGTGTTCGTCATGCACGACTT--------------
--------------------------------GTTTGTTGACTCGTGGGTTCGAAATTGGTTGCAGAGTTCGCGTCCCAG
AGCGGGGGCATCTCGGCGCAGGTGATCAAGAGGGCCTTCGGCGCCACGGAGGAGGAGTTCATGGGCATGGTGGAGAGGTC
GTGGCCGTCGCAGCCGCGGCTCCTGTCCGTCGGCTCCTGCTGCCTGGTGGGCGCCATCGAGGGCGGCACGCTCCACGTCG
CCAACCTCGGCGACTCGCGCGCCGTGCTGGGCCGCCTCGCCAGCGCGGGCGGGAAGAAGCGGAGGGCGGTGGTGGCGGAG
CGGCTGTCGCGGGACCACAACGTGGCCGACGAGGAGGTGCGGCGGGAGGTGGCGGAGGCACACCCGGACGACCCGCACAT
CGTGATGAGCAGCCACGGCGTGTGGCGGATCAAGGGGATCATCCAGGTGTCCCGCTCCATCGGGGACGCCTACCTGAAGC
GGCCCGACCTGTGCACCCCGGCGGTGATGCAGTCGCTCTGCCCGTTCCCGCTGCGCCGCCCGGTGATGAGCGCCGTGCCG
TCGGTCACGTCCCGCAGGCTGCGCCCGGGCGACCAGTTCATCATCTTCGCGTCCGACGGGCTGTGGGAGCAGCTTAGCGA
CGAGGCCGCCGTGGGCATCGTGTCACGCAGCCCGAGGAAGGGCGTGGCGATGCGGCTGGTGCGCGCCGCGCAGCTGGAGG
CGGCCAGGAAGAAGGACATCAAGTACGAGAGCATCGCGGCCATCGAGAAGGGCCGGAGAAGGCGCTTCCACGACGACATC
ACCGTCGTCGTGCTCTTCCTCGA---------------CACGCCGCAGCCGACAGCCGGCGCCGGCGGGATCGACGGCAC
GCGCGCGCCCGTCGACGTGTTCTCGCTCGGCCCCGACGACCACGGGGACGACCCGACCAGGCCCGTGCTGCGCTGA----
--------------------------------------------------------------------------------
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-----------------
>chr4A_1_TraesCS4A01G050000
TGCTTTGGTTGGAGGTTGGAGTTCCCCCTCTGGCCGGCGACGATGGTGCATGTCAGGCACGTGTGCAGCGGTTTCGGCTA
AGTGGCATCCCCTCGAGCCATTTATTTACGCGTGGCAACTCCTTTAGGCGGTTTTAGACACACGTCATTTAAAGGCGGTT
TTTTTTCCTTTTATTATTATATATTATATATGTCATCTTGTATATGAATATCTATGGGATATAATCTTCCGTGGGCTATT
TTAGCCCCACCGGATGTGAACGGAAGCAGGGTTTTATTAGTTTGGCAAAAAAAAAAAGGAAGGTTGCATATATAGCGGCA
AAGGGAGCGTCGTGTCATCGCAAAGTGGTCGTTTTGAGTTTGACAACTCGATTGAGGAAATAGAGACGAACATAGACAAG
ATTACAAGTGTTGGCACACGTCCGATCCGATGGCATTGAAACCCAATTTCCATTCTCAAGGAACGGGAACAAACTGTGCC
TGCCAGACCAGACCACATTCCAGTGCAAGGATAT--CTTGAGAGATTCCAGAGAC---TAGAGCTCCACTGCCGCATTCC
ACACAACGTCTCTCGGAGTAAACGATGACACGACAGAACTAAAGCCGTGGTATATCGGCGCCCTCCCTTTTCCTCGAAAG
TCTATCAGATATGTGACCGATCCTCCCTCCTACGACCGGACGTGGCAGCGGCATTTAGCAATCATGCGTCCTTTTCCCAT
CAGC--------------------CATATCAATTTCTCCAGATG-GAATTGAGCTAGAGCTAGA------ATTCCTGCGC
GAGGCCGAGGAAACGAACGCGTTCGGGTTCAGACGGTCGGTCGGTCGGCCACCGATCGGTCGCCGGCGCGTCGTTGAGAT
GTCTGCCATCCGGTTCGCATGAGCGAGACTGGAAAGAGAGTTTGAACAGCCAAACTTAACGAACGCGTCTTCCACGCACG
CACCCCCCGTTTCTCGTCGCCGTGCCGTGCCCCCGCCATCCACCGCTGCCATCCCACGCGCTTACCCCGCCTATGAGTAC
ACCGGGCCACCCGCCCGGCCGCTTGTCACACTCGCGCTCCACAGGACACTCCCTCGGCCTCCTCCTCCGCAGCTCTTTCA
CACCACCCCATCC------CACGGTCGACCGAGGTGCGTGCAGAGGCATGAGGGGCTCGCGGTGGTGCTGCTGCTGCTTC
GGCCGGGGCGGCGGCGGCGGGGCCGGGCGGTCGGGGAGCGTGGGCGACGACGGGCTGGTGTGGGACGTGGGCCTCAAGGC
GCACGCCTCCGGCGAGTACTCCGTCGCCGTGGCCCAGGCCAACGAGGCGCTCGAGGACCAGGCGCAGGTGCTCGTCTCCC
CCGCCGCCACGCTCGTCGGCGTCTACGACGGCCACGGCGGCCCCGACGCCGCCCGCTTCGTCAACGCGCGCCTCTTCTCC
CTCATCCAAGGTTCGCCTGCCTCCTACACTCGTTCAACGCGCGCGCGTGTTCGTCATGCACGACTT--------------
--------------------------------GTTTGTTGACTCGTGGGTTCGAAATTGGTTGCAGAGTTCGCGTCCCAG
AGCGGGGGCATCTCGGCGCAGGTGATCAAGAGGGCCTTCGGCGCCACGGAGGAGGAGTTCATGGGCATGGTGGAGAGGTC
GTGGCCGTCGCAGCCGCGGCTCCTGTCCGTCGGCTCCTGCTGCCTGGTGGGCGCCATCGAGGGCGGCACGCTCCACGTCG
CCAACCTCGGCGACTCGCGCGCCGTGCTGGGCCGCCTCGCCAGCGCGGGCGGGAAGAAGCGGAGGGCGGTGGTGGCGGAG
CGGCTGTCGCGGGACCACAACGTGGCCGACGAGGAGGTGCGGCGGGAGGTGGCGGAGGCACACCCGGACGACCCGCACAT
CGTGATGAGCAGCCACGGCGTGTGGCGGATCAAGGGGATCATCCAGGTGTCCCGCTCCATCGGGGACGCCTACCTGAAGC
GGCCCGACCTGTGCACCCCGGCGGTGATGCAGTCGCTCTGCCCGTTCCCGCTGCGCCGCCCGGTGATGAGCGCCGTGCCG
TCGGTCACGTCCCGCAGGCTGCGCCCGGGCGACCAGTTCATCATCTTCGCGTCCGACGGGCTGTGGGAGCAGCTTAGCGA
CGAGGCCGCCGTGGGCATCGTGTCACGCAGCCCGAGGAAGGGCGTGGCGATGCGGCTGGTGCGCGCCGCGCAGCTGGAGG
CGGCCAGGAAGAAGGACATCAAGTACGAGAGCATCGCGGCCATCGAGAAGGGCCGGAGAAGGCGCTTCCACGACGACATC
ACCGTCGTCGTGCTCTTCCTCGA---------------CACGCCGCAGCCGACAGCCGGCGCCGGCGGGATCGACGGCAC
GCGCGCGCCCGTCGACGTGTTCTCGCTCGGCCCCGACGACCACGGGGACGACCCGACCAGGCCCGTGCTGCGCTGAATCA
GCCCGCCAGCCGGTCAGTCGGTCAGCGACGTGGATGCTCACCGAACGTGGCACCGTAAACGTGCTAGCGGCGTTAATTTT
CGGCGACTTTTGCTCTCTGGAACGGAAGATACGGGAGCATGCGTTCTTTGCTTTCCGCGTCGAATTAAGAGGAGGATTAT
TT-ATGTTTAATTAGTTGTGTAGATAAGTAG--------TGCCGTGTCGTGTTGGTGTGAAGAGAATTTAAGTGGTACTC
TGTGCTTGAGCTTCTTCTGTGATCAATTCAGAGGTTGCTTTGCCCCCTCCAATTTCCTGTCTGTTCT-------------
------------GTTCTGCCTATTTCCGTGTTTCATTTTACTCAAAATAATAATGGTCTTGTTTTTAGGGAAATCTTAGC
TGGCGAACGTTAGCCACGGACGTTTTGCCAGCGAACCCTCCCTAAACCGCACGATCTCCATCCGATGGATGGCAGTTTCA
TAAAAGAAACATGAAAGGAAGGAACTGCCATGACAGTTTCTAATAACCGCCACCCTGCTATCCCCTTAAACGCATTAAAA
ACCGCCGTCTCCCCCATTCTTGC-----------------GAACGGACCCTAGTTACGCTCGTCCTGTTTTTAAGGCAAG
AGCGGGAAAGTAGTTGTCAACGGACGAAGGGATATAATGTAAAGAAACAAATATGCTATTTACTAGGCGCCTGAAAATTT
TCCAAGCGCCAAACGAGTTAGAATGAGTAGGTTCGAGCTAGAGACGGTGAGGCCGTGGCATCGACGGCGGAGGACGGGAA
GGAGGTTCTTGCCGTGGGTGCGGTGTGACGGCTGGTCGATGACGCTATAGGAGGACGGGGCTTAGAGAGATGATCGGGGC
AGCGCTAAACTGGTAGAGAACAACGTGTGGA------GGCGTGCGTGAGAGAGAGGGGGCGGTG---GTTTGGCCAGCGG
TACATGGAGCAA-GGGGTGTTGGGAGGATAAATACAAATGAAGAAAATGAATCCAACGGTTAGAAAAAACAACTGCCATT
GATTATTATTTTTATCG
>chr4B_292
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------AAAAAAGGAAGATTGCATATAC--CGGCA
AAGTGAGCGCCGTGTCATCACAAAGTGGCCGTTTTGAGTTTGGCAGCTCGAGTGAGGAAACAGAGACGAGCAGAGACAAG
ATTACAAGTGTTGTCACACGTCCGATCCAATGGCATTGAAATCAAATTTCCATTCTCAAGGAACGAGGACGAGGCGTGCC
TGCCAGACCACACCACCTTTGAGAGCAAGGATATATCTTGAGAAATTTCAGAGACT----GAGTTCCACTGCCGCATTCC
ACACAACATCTCTCGGAGTAAACGATGACACGACAAAACTAAGCCGTG---ATATCGGTG----CCCTTTTCCTCGAAAG
TCTATAAGATATGTGACCGATCCTCCCTCCTACGGCCGGGCGTGGCAACAGCATTTAGCGATCATGCGTCCCTTTCCCAT
CAGCCATAGTGAATTCGAGATGCACATATCAATTTCTCCAGATG-GAATTGAGCTAGAGCTAGAGCTAGAATTCCTGCGC
GAGGCAGAGGAAACGAACACGTTCGGGTTCAGACGGTCGGTCGGTCGG-------TCGGTCGCGGGTGCGTCGTTGAGAT
GTCTCTCATCCGGTTCGCATGAG----ACTGGAAAAAGAGTTTGAATAGCCAAACTTAACGAACGCGTCTTCCACGCACG
CACCCCTCGTTTCTCGTCGTCGTGCCGTGCCCCCGCGATCCACCGCTGCCATCCCACGCGCTTACCCCGCCTATGAGTAC
ACCAAGCCACCCGCCCGAACGCTTGTCACACTCGCACCCCACAAGGCACTCCCTCCC---------CCGCAGCTCTTTCA
CATCAC-----CC------CACGGTCGACCGAGGTGC----AGAGGCATGAGGGGCTCGCGGTGGTGCTGCTGCTGCTTC
GGCGGA---GGCGGCGGCGGGGCCGGGCGCTCGGGGAGCGTGGCCGACGACGGGCTGGTGTGGGACGTGGGCCTCAAGGC
GCACGCCTCCGGCGAGTACTCCGTCGCCGTCGCGCAGGCCAACGAGGCGCTCGAGGACCAGGCGCAGGTGCTCGTCTCCC
CCGCCGCCACGCTCGTCGGCGTCTACGACGGCCACGGCGGCCCCGACGCCGCCCGCTTCGTCAACGCGCGCCTCTTCTCC
CTCATCCAAGGTTTGCCTG----CTGCTCTCGTTCAA----CGCGCGTGTTCGTCATGCACAACTTTTACTCTACCATTA
TTGTAGTAATAATCAAATCGATCGGCGACCTTGTTTGTTGACTCGTGGATTCG---TTGGTCGCAGAGTTCGCGTCCCAG
AGCGGGGGCCTCTCGGCGCAGGTGATCAAGAGGGCCTTCGGCGCCACGGAGGAGGCGTTCATGGGCATGGTGGAGAAGTC
GTGGCCGTCGCAGCCGCGGCTCCTGTCCGTCGGCTCCTGCTGCCTGGTGGGCGCCATCGAGGACGGCACGCTCCACGTCG
CCAACCTCGGCGACTCGCGCGCCGTGCTCGGCCGCCTCGCCAGCACGGGCGGGAAGAAGCGGAGGGCGGTGGTGGCGGAG
CGGCTGTCACGGGACCACAACGTGGCCGACGAGGAGGTGCGGCGGGAGGTGGCGGAGGCGCACCCGGACGACCCGCACAT
CGTGATGAGCAGCCACGGCGTGTGGCGGATCAAGGGGATCATCCAGGTGTCCCGCTCCATCGGGGACGCGTACCTGAAGC
GGCCCGACCTGTGCAGCCCGGCGGTGATGCAGTCGCTCTGCCCGTTCCCGCTGCGCCGCCCGGTGATGAGCGCCGTGCCG
TCGGTCACGTCCCGCAGGCTGCGCCCCGGCGACCAGTTCATCATCTTCGCGTCGGACGGGCTGTGGGAGCAGCTCAGCGA
CGAGGCCGCCGTGGGCATCGTGTCCCGGAGCCCGAGGAAGGGCGTGGCGATGAGGCTGGTGCGGGCCGCGCAGCTGGAGG
CGGCGAGGAAGAAGGACATCAAGTACGAGAGCATCGCGGCCATCGAGAAGGGCCGCCGGCGGCGCTTCCACGACGACATC
ACCGTCGTCGTGCTCTTCCTCGACAACAGGTGCGAGGGCACGCCGCAGCCGACGGCCAGCGCCGGCGGGATCGACGGCAC
GCGCGCGCCCGTCGACGTGTTCTCGCTCGGCCCCGACGACCACGGGGACGACCCGACCAGGCCCGTGCTGCGCTGAATCA
ATCCGCCAGCCGGTCAGTCGGTCAGCGACGTGGACGCTCACCGAACGTGGTACCGTAAACGTGGTAGCGGCGTTAATTTT
CGGCGACTTTTGCTCTCTGGAACGGAAGATACAGGAGCATGCGTTCTTTGCTTTCCGCGTCGAATTAAGAGGATTA----
TT-ATGTTTAATTAGTTGTGTAGATAAGTAGATAAGCAGTGCCGTGCCGTGTTGGTGTGAAGAGAATT-AAATGGTACTC
TGTGCTTAAGCTTCCTCTGTGATCAATTTAGAGGTTGCTTTGCCCCCTCCAATTCCTTGTCTGTTCTC------------
--------TTCTGTTCTGCCAATTTTCGTGTTTTATTTTACTCAAAATAATAATGGTCTTGTTTTCGGGGAAATCTTAGC
CGGCGAACGTAAGCCACAGACGTTTTGCCAGCGAACCCTTCCTAAACCGCACGATCTCCATCCGATGGATGGCAGTTTTC
ATGAAAAAAAATGAAAGGAAGGAACTGCCATGGCAGTTTCTAAAAACCGCCACCCTACCA-CCCCTTAAACGCACTAAAA
ACCGCCGTCTCCCTCGTTCATTTGCCATGCAGGCTTTAGTGAACGGACGCCAGTTATGCGCGTCCTATTTTTAAGTCAAG
AGCAGAAAAGGAGTTGTCAACGGACGGAGGGATATAGTATAAAGAAACACATATACTATTTACCAGGCACCTGGAATTTT
CCCAAGCGTAAAACGATTTAGAATGAGTAGCTCTGAGCTAGAGACGGTGAGGCCGCGACATCGACGGCGGAGGACGGGAA
GGAGGTTGTTGCCGTGGGTGCGGTGGGACGGCCGGTCGATGACGCTAGAGGAGGACGGGGCTTAGAGGGATGATCGGGGC
AGCGTTAAACCGGTAGAAAACAGCGCG-GGA------GGCGTGCGTGAGAGAGAGGAGGCGGCG---G-TTGGCCAGCGG
TACATGGGGT-GGGGGGTGTCGGGAGGATAAATACAAATGAAGAAAAAGAATCCAGTGGTTAGAAAAATCAACTGGCATT
GATTTTTTT--------
>chr4D_345
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------GTGGCCGTTTTGAGTTTGGCAGCTCGAGTGAGGAAACAGAGACGAACAGAGACAAG
ATTACAAGTGTTGGCACACGTCCGATCCGATGGCATTGAAATCCAATTTCCATTCTCGAGGAACGCGAACGAC-CGTGCC
TGCCAGACCATACCACATTTCAGAGCAAGGATATATCTTCAGGAATTTCAGAGACTACTAGAGTTCCACTACCCCATTCC
ACACAACTTCTCTCGGAGTAAACGATGACAGGACAAAACTAAAGCCGTGATATATCGGTG----CACTTTTCCCCGAAAG
TCTATGAGATATGTGACCGATCCTCCGTCCTACGGCCGGACGTGGCAGCAGCATTTAGCAACCATGCGTCCCTTTCCCAT
CAGCCGTAGCGATGATGCACGTATCA-ATCAATTTCTCCGGATGGGAATTGAGCTAGAGCTAGA------ATTCCTGCGC
GGGGTCGAGGAAACTAACACGTTCGGGTTCAGACGGTCGGTCGG----CCACCGATCGGTCGCCGGTGCGTCGTTGAGAT
GTCTGTCATCCGGTTCGCATGAG----ACTGGAAAAAGAGTTTGAACAGCCAAACTTAACGAACGCGTCTTCCACGCACG
CACCCCTCGTTTCTCGTCGCCGTGCCGTGCCCCCGCCATCCACCGCTGCCATCCCACGCGCTTACCCCGCCTATGAGTAC
ACCAGGCCACCCGCCCGGCCGCTTGTCACACTCGCGCTCCACAACACACTCCCTTGGCCTCCTCCTCCGCACCTCATTCA
CACCAC-----CCCCAACTCACGATCGATCGCTAGCCTCGCCGGAGCATGAGGGGTTCACGGTGGTGCTGCTGCTGCTTC
GGCCGG---GGCGGCGGCGGGGCCGGGCGGTCGGGGAGCGTGGGCGACGACGGGCTGGTGTGGGACGTGGGCCTCAAGGC
GCACGCCTCCGGCGAGTACTCCGTCGCCGTGGCCCAGGCCAACGAGGCGCTCGAGGACCAGGCGCAGGTGCTCGTCTCCC
CCGCCGCCACGCTCGTCGGCGTCTACGACGGCCACGGCGGCCCCGACGCCGCCCGCTTCGTCAACGCGCGTCTCTTCTCC
CTCATCCAAGGTTTGCCTCCT------ACTCGTTCAA----CGCGCGTGTTCGTCATGCACAACTT--------------
--------------------------------GTTTGTTGACTCGTGGGTTCG---TTGGTTGCAGAGTTCGCGTCCCAG
AGCGGAGGCATCTCGGCGCAGGTGATCAAGAGGGCCTTCGGCGCCACGGAGGAGGCGTTCATGGGCATGGTGGAGAAGTC
GTGGCCGTCGCAGCCGCGTCTCATGTCCGTCGGCTCCTGCTGCCTGGTGGGCGCCATCGAGGGCGGCACGCTCCACGTCG
CCAACCTGGGCGACTCGCGCGCCGTGCTGGGCCGCCTCGCCAGCACGGGCGGGAAGAAGCGGAGGGCGGTGGTGGCGGAG
CGGCTGTCGCGGGACCACAACGTGGCCGACGAGGAGGTGCGGCGGGAGGTGGCGGAGGCGCACCCGGACGACCCGCACAT
CGTGATGAGCAGCCACGGCGTGTGGCGGATCAAGGGGATCATCCAGGTGTCCCGCTCCATCGGGGACGCCTACCTGAAGC
GGCCCGACCTGTGCAGCCCGGCGGTGATGCAGTCGCTCTGCCCGTTCCCGCTGCGCCGCCCGGTGATGAGCGCCGTGCCG
TCGGTCACGTCCCGCAGGCTGCGCCCCGGCGACCAGTTCATCATCTTCGCGTCGGACGGGCTGTGGGAGCAGCTCAGCGA
CGAGGCCGCCGTGGGCATCGTGTCCCGGAGCCCGAGGAAGGGCGTGGCGATGAGGCTCGTGCGCGCCGCGCAGCTGGAGG
CGGCCAGGAAGAAGGACATCAAGTACGAGAGCATCGCGGCCATCGAGAAGGGCCGCCGGCGGCGCTTCCACGACGACATC
ACCGTCGTCGTGCTCTTCCTCGACAGCAGGTGCGAGGGCACGCCGCAGCCGACGGCCGGCGCCGGCGGGATCGACGGCAC
GCGCGCCCCCGTCGACGTGTTCTCGCTCGGCCCCGACGACCACGGGGACGACCCGACCAGGCCCGTGCTGCGCTGATCG-
ATCCGCCAGCCGGTCAGTCGGTCAGCGACGTGGATGT---------GTGGTTCCGTAAACGTGCTAGCGGTGTTAATTTT
CGGCGACTTTTGCTCTCTGGAACGGAAGATACGGGAGCATGCGTTCTTTGCTTTCCGCGTCGAATTAAGAGGATTA----
TTTATGTTTAATTAGTTGTGTAGATAAGTAGATAAGCAGTGCCGTGTCGTGTTGGTGTGAAGAGAATT-AAGTGGTACTC
TGTGCTCAAGCTTCTTCTGTGATCAATTCAGAGGTTGCTTTGCCCCCTCCAATTTTTTTTTTTTTTTTTGAGGATTTGCC
CCCTCCAATTCTGTTATGCCAATGTTCGTGTTTTATTTTACTCAAAATAATAATGGTCTTGTTTTTAGGGAAATCTTAGG
TGGGGAACGTCGGCCACGGACGTTTTGCCAGCAAACCCTTCCTAAACCGCACGATCTCCATCCGATGGATGGCAGTTTCA
TAAAAGAAACATGAAAGGAAGGAACTGCCATGGCAGTTCCTAAAAACCGCCACCCTGCCACCCCCTTAAACGCATTAAAA
ACCGCCATCTCCCCCGTTCTC-----------------GTGAACGGACCCTAGTTACGCTCGTCTTGTTTTTAAGGCAA-
AGCGGGAAAGTAGTTGTCAACGGACGAAGGAAGATAGTGTAAAGAAACAGATATGCTATTTACTAGGTGCCTGAAATTTT
TTCAAGCGCCAAACGAGTTAGAATGAGTAGGTCCGAGCTAGAGACGGTGAGGCCGCGACATCGACGGCGGAGGACGGGAA
GGAGGTTCTTGCCGTGGGTGCAGTGTGACGGCTGGTCGATGACGCTAGAGGAGGACGGGGCTTAGAGAGATGATCAGGGC
GGCGCTAAACTGCTAGAGAACAGCGTG-GGGAGGCTTGGCGTGCGTGAGAGAGGGGGGGGGGCGACGGTTTGGCCAGCGG
TACGTGAGGTAGGGGGGTGTCGGGAGGATAAATACAAATGAAGAAAAGGAATCCAACGGTTAGAAAAATCAACTGACATT
GATATATTTTTTTA---
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S---------SSS-----
---S-----S---------S--------S-------------S--S-----S--------S-----------S-------
-----------------------------------------S-----------------------S----S-SSS-----
----------S--------S---S-------------------S---S---------------S----------------
-------S---------------------------S-------------S--------S-SSSS----------------
-----S----------------------------S--------------S---------------------S--------
--------------------------------------------------------------------------------
------------------S-----------------------------------------------S-------------
-----S-----------------SSSS--------S--------------------------------------------
------S-------------------------------------------------------------------------
---S---------------------------------------S------------------------------------
------SSSSS--------------------------SS-----------------------------------------
------SSS-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------SSS--S-----------SSSS--------------------S------------------
-----------------------------------------------------SSS------------------------
-------------------------------------------------------S--------------------S---
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------S--------------------------S--------------------S-----
------------------------S--S------------------------S---------------------------
-------------------------------------------------------SS-SS--------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
SS------------------------------------------------S-----------------------------
-------------------------------------------------------------------------SS-SSSS
--------------------------------------------------------------------S-----------
-------S------------------------------------------------S-----------------------
--------------------S----S-------S----------------------------------------------
----------S----------------------------S----------------------------------------
--------------------------------S----------S--------------S-S-------------------
---------------S-----SS---------------------------------------------------------
------------------------------------S------------S--------------------------S---
--------------------------------S----------------------S-S----------------------
-----------------------------------------------S--------------------------------
----------------------S----S----------------------------------S-----------------
-------S-S-S--------S--------------------------S--------------------S------S----
----S--S------SSS
>forward_500
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TGCCAGACCAGACCACATTC------------------------------------------------------------
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-----------------
>reverse_1656
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------AGTTCATGGGCATGGTGGAG-----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
>forward_1131
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------GCTCTTTCA
CACCACCCCAT---------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------
>reverse_2107
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------GGGCGACCAGTTCATCATCT----------------------------------
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-----------------
>forward_1677
--------------------------------------------------------------------------------
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---------------------------------------------------------TTCATGGGCATGGTGGAGAG---
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-----------------
>reverse_3328
--------------------------------------------------------------------------------
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-----------------------------------------------TAGGAGGACGGGGCTTAGAG-------------
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-----------------
