>input_sequence_53187
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-------------------------------------------------------------------------------A
CTTTCCTGCCTTCCTCCATTGCTCGCC-----GCCCTTAAGCCAGCTCAGGT---AGCAACTAGAGCCGACATGATGGCG
GAGGCGTGGGTGGACGTGCTGCC---GCCGCCGGCGCCCTACTTCGCCGGGCAGCCGTGCTGGGCCGTA---------CA
GCAAGAGCGTCGTGGAGGCGGCGCCTGGACACTGGAGGAGAACAAGGTGTTCGAGGAGGCGCTCGCGGCGATCGACCTGG
ACGCGCCGGACCGGTGGGAGATGGTCGCGCTGATGCTGCCCAGGAAGACGGTCGCCGACGTGGTGAACCACTACCGGGCC
CTCGAGAACGACGTCGGGTTCATCGAGGCCGGGCTGGTCCCGTTTCCTCACTACGACAGCTCG---------------TC
CCCTTCGTCCGGGTTCACTCTGGACTGGGACGGCGGCGCCGCCGGCGCCGGCGGGTTCAGGCGCGGCTACTGCCT-----
----------CAAGCGCGGGCGCGCC---GACCAGGAGCGGAAGAAGGGCGTCCCGTGGACGGAGGAGGAGCACCGGTAA
GCCGCCATCTTCATGATCTTCTTCTTGTGCTTGGATTGTTGCTTGTTGTTGGTGGAAATCTGATCGTGTTCGTGCGCTGC
GTGC-----AGGCTGTTCTTGAAGGGGCTGAAGAAGTACGGGAGAGGCGACTGGAGGAACATCTCGCGGAACTACGTGAC
GAGCCGCACGCCGACGCAGGTGGCCAGCCACGCCCAGAAGTACTTCATCCGGCTCACCTCCGGCGGCAAGGACAACAAGC
GCCGCTCCAGCATCCACGACATCACCACCGTCAACGTGCCCGACGACGACGACCGCGGCAG---------CCCCTCGGGG
TCCCCGCCGTCCGCGCTCACCACCGTCGACACGAAGCCCTCGCCGTCGTACGGCGGGCAACGGCACGCCTTCATGCCGCC
GACGCTGCCAGCGGGGACGCTCGGCGGCGGCCACCCCTATGGCAACGTGAAGCTCGAGCACCAGAGCTCGTTCATGGACG
GCGCGGGCCTCGACCTCGACGACTCGCTCCTCCTGCAGATTCAATGCGGCCAGCTGTGACGGAGCTTTCTCGCCGCGGCG
AAGCCCGCACGGAGGACAAAACAGCGGCGGCCACCTATCACCATCATCGCGTCCACGGGCGCGGCCGCACCAGGGACGAG
GCAGGCGGACGTGCTCTGCTTGCCTCGAGAGCAGTTTGGTTGCAGAGTCGCTGTGCTTGTGTCTCTCTCGACCGACACTC
GGATGATGGAACGCAAGCGAAAACATCTGAGAGCGACACGGCGGTGTTGAGCGTACGTGCAGGTCTGCGTCCATGGAGAA
G-CTCAAGAACCCATCGATCGTGCCGTCCAGTGTACATAACCCCGCCACAAGTATACGG--CCACTGTACCGAA-----A
AT-CTGAAATAAG-------------------------------------------------------------------
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>chr3B_1_TraesCS3B01G399300
CTGGACAGAATATCCACCGCTGCTACTACACAACCATGCCCTCTACATTAAACCACCATTCATAGATTGCATCTCATCAT
TGAGGGCTACCAGACGAAAGCCCTCCCTACCGCCACCTTCATTGACCAGTGTCAGGGTTTAGGGCGACCACTAGTCTCAA
GCAGCGGCAAGGGGAAGCGGGGATGGAGAGGCAGGAGATGGTGGCTTATGTTTCGGTACCTACGA----------CTATC
AAAAGGGAGGCACATATTCTATGTGGTGCAAGATTTTCTTGTACTTTGCATTATGTCTGCCACAATAA------------
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----------ACATGTTCATTTAATGCCCCGCAGCCATCCAGACCTAGGATGCCCTACTCCTCCCGGTATCGCCCTCCAT
CGAGCTCATTTGGGATGTCCCCACGCTGCTGGACCTCCATGGTGATATTTGGTCGTCGGTTGTTCTCTCCTTGCTATGGA
ATATTTGGGATTCCAGAAACAAT-TTGTCTTTCGCAACGAACTCCACTCCGTAAGGACTAGCGCTAGAAATTTAGCTAGT
GACTTCACTCTTTGAACTTTCAGATACGAAAACGTCTCTAAGAAGGATGCCTCCATATCATAGCGTCAATACCTCTCCTC
ACA--CTAGCACACAATTGCAAAGCTTGCCATTTGGTCGCCTTTGAATAATGCATTCGA-TAGGGATCATCTCCCCCTAG
TGATTGGTCACAAAAATCAATTCCTTCGGTTAAAATAATTCACACATGTCTGAAAAAGCAAGACATATAT--TCAACAAA
ACTGAATCTTGTTACCATTAGTTAGCACTCTCCTC-TTTACCTCTTGTGCTTGGTTGAGAGGCCACAAACTCCACCAAGG
CCCAATCACAAGCACCCACTTTCTTTTTGCTCATCTTCTCAAGGCCTCCAACGGTGGAGGCGGAATAAACTCCGGCCACT
TTTTGTAGCCGCCCGGAATTTGATACTCCCCCGGTCCTCCCCTATATAGGCATGCCTCCTTCCACCTCTCCCCTTCGCCA
CTTTCCTGCCTTCCTCCATTGCTCGCC-----GCCCTTAAGCCAGCTCAGGT---AGCAACTAGAGCCGACATGATGGCG
GAGGCGTGGGTGGACGTGCTGCC---GCCGCCGGCGCCCTACTTCGCCGGGCAGCCGTGCTGGGCCGTA---------CA
GCAAGAGCGTCGTGGAGGCGGCGCCTGGACACTGGAGGAGAACAAGGTGTTCGAGGAGGCGCTCGCGGCGATCGACCTGG
ACGCGCCGGACCGGTGGGAGATGGTCGCGCTGATGCTGCCCAGGAAGACGGTCGCCGACGTGGTGAACCACTACCGGGCC
CTCGAGAACGACGTCGGGTTCATCGAGGCCGGGCTGGTCCCGTTTCCTCACTACGACAGCTCG---------------TC
CCCTTCGTCCGGGTTCACTCTGGACTGGGACGGCGGCGCCGCCGGCGCCGGCGGGTTCAGGCGCGGCTACTGCCT-----
----------CAAGCGCGGGCGCGCC---GACCAGGAGCGGAAGAAGGGCGTCCCGTGGACGGAGGAGGAGCACCGGTAA
GCCGCCATCTTCATGATCTTCTTCTTGTGCTTGGATTGTTGCTTGTTGTTGGTGGAAATCTGATCGTGTTCGTGCGCTGC
GTGC-----AGGCTGTTCTTGAAGGGGCTGAAGAAGTACGGGAGAGGCGACTGGAGGAACATCTCGCGGAACTACGTGAC
GAGCCGCACGCCGACGCAGGTGGCCAGCCACGCCCAGAAGTACTTCATCCGGCTCACCTCCGGCGGCAAGGACAACAAGC
GCCGCTCCAGCATCCACGACATCACCACCGTCAACGTGCCCGACGACGACGACCGCGGCAG---------CCCCTCGGGG
TCCCCGCCGTCCGCGCTCACCACCGTCGACACGAAGCCCTCGCCGTCGTACGGCGGGCAACGGCACGCCTTCATGCCGCC
GACGCTGCCAGCGGGGACGCTCGGCGGCGGCCACCCCTATGGCAACGTGAAGCTCGAGCACCAGAGCTCGTTCATGGACG
GCGCGGGCCTCGACCTCGACGACTCGCTCCTCCTGCAGATTCAATGCGGCCAGCTGTGACGGAGCTTTCTCGCCGCGGCG
AAGCCCGCACGGAGGACAAAACAGCGGCGGCCACCTATCACCATCATCGCGTCCACGGGCGCGGCCGCACCAGGGACGAG
GCAGGCGGACGTGCTCTGCTTGCCTCGAGAGCAGTTTGGTTGCAGAGTCGCTGTGCTTGTGTCTCTCTCGACCGACACTC
GGATGATGGAACGCAAGCGAAAACATCTGAGAGCGACACGGCGGTGTTGAGCGTACGTGCAGGTCTGCGTCCATGGAGAA
G-CTCAAGAACCCATCGATCGTGCCGTCCAGTGTACATAACCCCGCCACAAGTATACGG--CCACTGTACCGAA-----A
AT-CTGAAATAAGCAGTTCATGAAGCTTGTACTCGTTCGCCGTTGTCGCCGGCCGGCGGCTCCGATCAGGAGCTCGCACC
GGTGTGAAATTTGGTTAGAGCG---------------CTTCTTTCAGTTTATCGTTGCTAGTTATGCGTGTGAGAAGCTT
TCGCGAGATCCGTCGCCATTGCTGCACCGCCTCC----GCCTCCCCGTGAGAAGTTTCGATTTGGCTTCGCTCTCTCGCT
C-------GCTCACCTCACCTGAAATCCTCCATGCCATGCCATGTGCTGCCGGCCTAGCCTGGCGA----CCGGGCTTCT
CATTAATGCCGATCGATCTCGTTCCGTCCGTAGTCTCCGCCACAAATATTGAATTCTCATCTTCGCAGGCCCGGGCATAA
ACTAGTCCGCCTCGTGCTCCTTGCTCCTGCTGCCC-----GCCCATGCGCAGGTGCCGGGCTCCGTCCGCCCTGGCGATT
CCCTCCGCGCCACCT----CTGGCTGACTCCCAGTTGGCCAGTTGCT----GGGAGAAAGAAAGAAAGGAGAGTATCAAT
TTGATTCGTCAATCAGGTCGACGAGAAGTGCCTTGCCTTGCCTGATAGTGGCTGGCACGCTGCACGCAGCATCAATATA-
---CTGTAGGAGTAATAGGGAGGGGGTGAGTTGGAGGTCCACCCAGCCCGGCCAGCGCGCGAGCA----AGCCAAAAGAA
AAGCATCACATGCCCCAACAGCAGCGAATCCCATGTCCTTCTCGCTGTCGTCTCCCTTTTCGTCCCCTTCCTT----CCC
AAAGCAAAAGGAAAGCAAAGCCTCGGCGC--CGGCCACGGCCGGCCCTGTACGCTCGCACCATTCTTCATCAGTGGCGGT
GGGCGCACGCTGTCGAGGGCACGGGCACGGGCACGGGCACGGCCGCAGCAGTGAGCCT-----CACTCATTCGTCCACTC
ATCACCCAGCTTGCGCGCACACAC------GCCTGGCCCTCACCGTCTCCGGACGTACGTGCAGCATGCAGGTGCCGGCC
GGT-----CCCAGAGCTCCAGTGGCGCACAGTGATTGTCTGTCACA
>chr3D_3
GGACAA--AATATGCACCGCTGCTGCTTCACAACCATGCCCTCTACCTCAAACCACCATTCATAGATTGCATCTCATCAT
TGAGGGATACCAGACGAAAGACCTCCCTACCGCCGCCTTCATTGACCAGTGTCAGGGCTTAGGTCGACCACTAGTCTCAA
GCAGCGGCAAGGGGAAGGGAAGATGGAGAGGTAGGAGATGGTGGCTTATATTTCGGTGTCTACGGCTATCAAAAGCTATC
AAAAGGGAGGCACATATGCTATGTGTTGCAAG--TTTTTTTTACTTTGCATTATGTCTGCGACAATAATGTTGTACTTTG
TACAATGTCTCATAAATACATGTTTGAAAAAAAATCTGAATAAGTTCTTACATGTGTAACAAAAATTTATACACCTACAT
ATCCTAGTTATGAAAGACGATCAATTCCTTCGATTTCGTCTCTTCAAGGATCGACTCAACTCCAAGAGCAACCTCTTCAA
GAAGACCATCAC-------------------------CCCCAACGGCCACTGCCCCAT---ATGCAACGCTCCAGTTGAT
GACGACCTTCACATGTTCATTCAGTACCCCATAGGCATCCAAATTTGGGATGCCCTATTCCTCTTGGTGCCGCCCTCCAT
CGAGCTCATTTGGGATACCCCCATGTTGTCGAACCTCCACGGTGACATTAGGTCGTCGATTGCTCTCTCCTTGCTATGGA
AAATTTGGGATTCCAGAAACATTCTTGTCTTTTGCAACGAACTCCACTCCGCAAGGACCAATGTTAGAAATTTAGCTAGT
GACTTCACTCTTTGAACTTTCAGATACGAAAATGTCTCTAA-AAGGATGCCTTCATGTCATGGCGTCAATACCTCTCCTC
ACGCTCTAGCGCACAATTGCAAAGCTCGCCTTGTAGTCGTTTTTGAGTAATGCATTCGCGTAGGGATTCTCTCCCC-TAG
TGATTGGTCA-AAAAATCAATTCCTTTGGTTAAAATAATTCATACATGTCTGAAAAAGCAAGACATATATATTCACCAAA
ACTGAATCTTGTTACCATTAGTTAGCACCCTCCTC-TTTACCTCTTGTGCTTGGTTGAGAGGCCACAAACTCCACCAAGG
CCCAATCACAAGCATCCACTTTCTTTTTGCTCATCTTCTCAAGGCCTCCAACGGTGGAGGCGGAATAAACTCCGGCCGCT
TTTTGTAGCCGCCCGGAATTTGATACTCCCCCGGTCCTCCCCTATATAGGCACGCCTCCTTCCACCTCCCCCCTTCGCCA
CTTTCCTGCCTTCCTCCATTGCTCGCCAGGCCGTCCTTAAGCCAACTCAGGTAGCAGCAACTAGAGCCGACATGATGGCG
GAGGCGTGGATGGACGTGCTGCC---GCCGCCGGCGCCCTACTTCGCCGGGCAGCCGTGTTGGGCCGTG---------CA
GCAGGAGCGTCGCGGAGGCGGCGCCTGGACGCTGGAGGAGAACAAGGTGTTCGAGGAGGCGCTCGCGGCGATCGACCTGG
ACGCGCCGGACCGGTGGGAGATGGTCGCGCTGATGTTGCCCAGGAAGACGGTCGCCGACGTGGTGAACCACTACCGGGCC
CTCGAGAACGACGTCGGGTTCATCGAGGCCGGGCTGGTCCCGTTCCCTCACTACGACAGCTCG---------------TC
CCCTTCGTCCGGGTTCACTCTGGACTGGGACGGGGGCGCCGCCGGCGCCGGCGGGTTCCGGCGCGGCTACTGCCT-----
----------CAAGCGCGGGCGCGCC---GACCAGGAGCGGAAGAAGGGCGTCCCGTGGACGGAGGAGGAGCACCGGTAA
GCCGCCGTCTTGGTGATCTTCTTCTTGTGCTTGGATGGTTGGTTGC-------GGAAATCTGATCGCGTTCTTGCGCTGC
GTGC-----AGGCTCTTCTTGAAGGGGCTGAAGAAGTACGGGCGAGGGGACTGGAGGAACATCTCCCGCAACTACGTGAC
GAGCCGCACGCCGACGCAGGTGGCCAGCCACGCGCAGAAGTACTTCATCCGGCTCACCTCCGGCGGCAAGGACAACAAGC
GCCGCTCCAGCATCCACGACATCACCACCGTCAACGTGCCCGACGACGACGACCGCGACAG---------CCCCTCAGGG
TCACCGCCGTCCGTGGTCACCACCGTCGACACGAAGCCCTCGCCGTCCTACGGGGGGCAACGGCATGCCTTCGTGCCGTC
GACGCTGCCAGCGGGGACGCTCGGCGGCGGCCACCCGTACGGCAACGTGAAGCTCGAGCACCAGAGCTCGTTCATGTCCG
GCGCGGGCCTCGACCTCGACGACTCGCTCCTCCTGCAGATGCAATGCGGCCAGCTGTGACGGAGCTTTCTCGCCGCGGCG
AAGCCCGCACGGAGGACAAAACAGCGGCGGCCACCTCTCACCATCATCGCATCCACGGGCGCTACCACACCAGGGACGAG
GCAGGCAGGCGGGCGC-GCTTGCCTCGAGAGCAGTTTGGTTGCAGAGTCGCTGTGCTTGTGTCTCTCTCGACCGACACTC
AGATGATGGAACGCAAGCGAAAATATCTGAGAGCGACACGGCGGTGTTGAGCGTACGTGCAGGTCTGCGTCCATGGAGAA
ACCTCAAGAACCCATCGG-CGTGCCGTCCAGTGTACATAATTCCGCCACACCCAAGAACCTCCACTGTACTGAAAAAAGA
AT-CTGTAATAAGCCTTCGATGAAGCTTGTGCTCCGGTGTGCTCCGGTCAGGAGCT--------------AGCTAGCGCC
GGCCTGAAAATTGGTTCGAACG---------------TTTCTCTGTCTATTGTACTCCAAATGA----------------
-------ATCCGTCGCCATTGTTAAACTTGCGCCGCCTGCCTCCCCGTGAGAGGTTTCGATTTGGCTTTGCTCTCTCGCT
CGCTCACGGCTCACCTCACCTGAAACCCT-----CCATGCCATGTGCTGCCGGCCTAGCCTGGCGAGCGACCGGGCTTCT
CATTAATGCCGATC----TCGTCCCGTCCGTCGTCTCCGCCACAAATATTGAATTCTCGTCTTCGCAGGCCCGGGC--AA
ACTAGTCCGCCTCGTGCTCCTTGCTCAGGCTGCCCTGCCCGCCCATGCGCAGGTGCCGGGCTCCGTCCGCCCTGGCGATT
CCGTCCGCGCCACCT----CTGGCTGACTCCCAGTTGGCCAGTTGCTTGCCGGGAGAAAGAAAGAA-GGAGAGTATCAAT
TTGATTCGTCAATCAGGTCGACGGGAAGTGCCTCGCCTTGCCTGATAGTGGCTGCCACGCTGCACGCAGCATCAATATA-
---CTGTAGGAGTAGTAGGGAGGGGATGAGTTGGAGGTCCACCCAGCCCGGCCAGCGAGCGAGCA----AGCCAAAAGAA
AAGCATCACATGCCCCAACAGCAGCGAATCCCGTGTCCTTCTCGCTGTCGTCTCCCTTTTCGTCCCCTTCCTTCCTCCCC
AGAGGAAAAGAAAAGCAAACTAGCAAAGCCTCGGCGCCGGCCGGCCCTGTACGCTCGCACCATTCTCCATCGGTGGCGGT
GGGCGCACGCTGTCGAGGGCACGGGCACGG--------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr3A_5
----ACACAAAATCCACCATTGCTGCTGCACAACCATGCTCTATGCCTCAAGCCATCGCTCATAGGTTGCATCTCATCAT
TGAGGGCTACCAGACGAAAGACCTCCCTACCGCAGCCTTCATTGACCAGTGTCGGGGCTTAGGCCAACCACTAGTACCAA
GCAATGGCAAGGGGAAGGGAGGATGGAGAGGTGGGAGATGGCGGCTTAGGTTTCGATGCCTACG----------GCTATC
AAAAGGGAGGCACATATGCTATGTGGTGCAAG--TTTTTTTTACTTTGCATTATATCTGCCACAATAATGTTGTACTTTG
TACAATGTCTCATAAAAACATGTTTCAAAAACAATCTGAATAACTTCTTACATGTGTAACAAAAAATTGTACACCTACAT
ATCCTAGTTATGGAACATGATCAATTCCTTCGATTTCGTCTCTTCAAGGATCGACTCAATTCCAAGAGCAACCTCTTCAA
GAAAACCATCACCCCTTTTGCAAAAAAAAAAAATTCACCCCAACGGCCACTGCTGCCCTAGATGCGAGGCTCCAGTTGAT
GACGACCTTCACATGTTCA----GTACCCAGTAGCCATCCAGATGTGGGATGGCCTACTTCACCCGGTGCCACCCTCCAT
CGAGCTCATTTGGGTTGTCCCCACGCTGTCGGATCTCCATGACGATATTTCGCCATCGATTGCTCTTTCCTTGTTATGGA
AGATTTGGGATTCCAGAAACATGCTTGTCTTTGGCAACGAACTCCACTTTGCAAGGACCAATGTTAGAAATTTAGCTAGC
GACTTCACTCTTTGAACTTT---ATACGAAAGTGTCTCTAAGAAGGATGCCTTCATGCCATGGCGTCAATACCTCTCTTC
ACGCTCTAGCGCACAATTGGAAAGCTCGCCTTTTACTCGTCTTTGAGTAATGCATTCGGGTATGTATCCTCTCCCCTTAG
TGATTTGTCA-AAAATTCAATTCCTCCGGTTAAAATAATTCATACATGTCTGAAAAAGCAAGACATATAT--TCAACAAA
ACTGAATCTTGTTACTATTAGCTAGCACTCTCCTCTTTTACCTCTTGTGCTTGGTTGAGAGGCCACAAACTCCACCAAGG
CCCAATCACAAGCATCCACTTTCTTTTTGCTCATCTCCTCAAGGCCTCCAACGGTGGAGGCGGAATAAACTCCGGCCACT
TTTTGTAGCCGCCCGGAATTTGATACTCCCCCGGTCCTCCCCTATATAGGCGCGCCTCCTTCCACCTCCCCCCTTCGCCA
CTTTCCTGCCTTCCTCCATTGCTCGCC-----GTCCCTAAGCCAGCTCAGGTAGCAGCAACTAGAGCCGACATGATGGCG
GAGGCGTGGGCGGACGTGCTGCC---GCCGCCGGCGCCCTACTTCGCCGGGCAGCCGTGCTGGGCCGTG---------CA
GCCGGAGCGTCGCGGAGGGGGCGCGTGGACGCTGGAGGAGAACAAGGTGTTCGAGGAGGCGCTCGCGGCGATCGACCTGG
ACGCGCCGGACCGGTGGGAGATGGTCGCGCTGATGCTGCCCCGGAAGACGGTCGCCGACGTGGTGAACCACTACCGGGCC
CTCGAGAACGACGTGGGGTTCATCGAGGCCGGGCTGGTCCCGTTCCCTCACTACGACAGCTCG---------------TC
CCCTTCGTCCGGGTTCACCCTGGACTGGGACGGCGGCGCCGCCGGCGCCGGCGGGTTCAGGCGCGGCTACTGCCT-----
----------CAAGCGCGGGCGCGCC---GACCAGGAGCGGAAGAAGGGCGTCCCGTGGACGGAGGAGGAGCACCGGTAA
GCCGCCATCTTCGTGATCTTCTTCTTGTGCTTGGATTCTTGGTGGC-------GGAAATCTGATCGCGTTCGTGCTCCGC
GTGC-----AGGCTGTTCTTGAAGGGGCTGAAGAAGTACGGGCGAGGGGACTGGAGGAACATCTCCCGCAACTACGTGAC
GAGCCGCACGCCGACGCAGGTGGCCAGCCACGCGCAGAAGTACTTCATCCGGCTCACCTCCGGCGGCAAGGACAACAAGC
GCCGCTCCAGCATCCACGACATCACCACCGTCAACGTGCCCGACGACGACGACCGCGGCAG---------CCCCTCGGGG
TCCCCGCCGTCCGCGCTCACCACCGTCGACACGAAGCCCTCGCCGCCGTACGGCGGGCAACGGCACGCCTTCGTGCCGTC
GACGCTGCAGCCGGGGACGCTCGGCGGCGGCCACCCCTACGGCAGCGTGAAGCTCGAGCACCAGGGCTCGTTCATGGACG
GCATGGTCGTCGACCTCGACGAGTCGCTCCTCCTGCAGATGCAATGCGGCCAGCTGTGACGGAGCTTTCTCGCCGCGGCA
AAGCCCGCACGGAGGACAAAACAGCGGCGGGCACCTATCACCATCATCGCATCCACGGGCG-------------------
----------------TGCTTGCCTCGAGAGCAGTTTGGTTGCAGAGTCGCTGTGCTCGTGTCTCTCTCGACCGACACCC
AGATGATGGAACGCAAGCCAAAACATCTGAGAGCGACGCGGCGGTGCTGAGCGTACGTGCAGGTCTGCGTCCATGGAGGA
ACCTCAAGAGCCCATCGA-CGTGCCGTCCCGTGTACATAATTCCGCCACACCCAAGAACCTCCACTGTACCGAAAAATAT
ATCCTGAAATAAGGCTTCGATGAAGCTTGTGCTCCGG----------TCAGGAGCT--------------AGCCAGCGCC
GGCCTGAAAATTGGTTCGAACTTCGAAGTTCGAGCGTTTTCTCTGTCTATTGTACTAGTCCAAAT---------------
----GAGATCCGTCGCCATTGTTGCTCCCT--CCGCCTGCCTCCCCGTGACAAGTTTCGATTTGGCTTCGCCCTCTCCGT
GCG-----------CTCACCTGAAATCCT-----CCATGCCATGTGCTGCCGGCCTGGCCTG----GCGACCGGGCTTCT
CATTAATGCCGATC----TGGCTCCGTCCGTCGTCTCCGCCACAAATATTGAATTCTCGTCTTCGCAGGCCCGGGCATAA
ACTAGTCCGCCTCGTGCTCCTTGCTCCGGCTGCCCTGCCCGCCCATGCGCAGGTGCCGGGCTCCGTCCGCCCTGGCGATC
CCGTCCGCGCCACCTCTGGCTGGCTGACTCCCAGTTGGCCAGTGGCC----GGGAGAAAGAAAGGA-GGGGAGTATCATT
TTGATTCGTCAATCAGGTCGACGGCAAGTGCCGTGCCTTGCCTGATAGTGGCTGGCACGCTGCACGCAGCAGCAATATAC
GTACTGTAGGAGTATACGGT--GGTATGAGTTGGAGGCCCACCGAGACGGACCAGCGAGCGGGCGAGCGAGCCAAAAGAA
AAGCATCACATGCCCCAACAGCAGCGAATCCCGTGTCCTTCTCGCTGTCGTCTCCCTTTTCGTCCCCTTCCTCGGCG---
-------------------------------CGGCAACGGCCGGCCCTGTGCGCTCGCACCATTCC---TCAGTGGCGGT
GGGCGCACGCTGTCGAGGGCACGGGCACGGCG------------GCAGTAGTGAGCCTCACTGCACTCATTCGTCCACTC
ATCACCCAGCTTGCCCGCACAGACGCCTGGGCCTGGCCCTCGCCATCTCCGGACGTACTGC----------GTGCCGGCC
GGCCGGTCCCCAGAGCTCCAGTGGCGCACAGTGATTGTCTGTTAC-
>chr1B_1062
GAGATGATGAA---------------------------------------------------------------------
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----------------------------------------------------------------------------GCAG
GAGTCGTGGATGGAGGTGCTGCCGGTGCCGCCGGCGCCCTACTTCGCCGGCCAGGCAGGCGGCTGGTTTTTGCAGGACCA
GCGGGGCGGCGGCGGCGGCGGGGCGTGGTCGCCGGCAGAGAACAAGCTGTTTGAGGAGGCGCTCGCGCGTGTCGACGGGG
ACGCGCCGGACCGGTGGGAGCGGGTGGCGGCGCTGCTTCCCGGCAAGACGGTGGCCGACGTCATGAGGCAGTACGACGAC
CTCGAGAACGACGTCTGCTTCATCGAGGCGGGCCTCGTCCCCTTCCCCCACTACAACGCCAACGCCGGCGGCGCCGGCTC
CCCGGCCTCCGAGTTCACCCTGGACTGGGACGGCGGCG------GCGACCTGGCGTTCAAGCGCTCCTGCTACATGGCGG
CCGGCAACGGCAAGCGCGGGCGCGGCTCGGACCAGGAGCGCAAGAAGGGCGTGCCCTGGACAGAGGAGGAGCACAAGTAA
GCCCCTCCCGATTACTTAACCCACACATGTACGGCTTCAAATCTCGTTGCGCGTGTCGTTGATCGGTGGGACGAACTCCT
GTTTGCCGTAGGCTGTTCTTGATGGGCCTGAAGAAGTACGGGCGAGGGGACTGGCGGAACATCTCGCGCAACTACGTGAC
CAGCCGGACGCCGACGCAGGTGGCCAGCCACGCGCAGAAGTACTTCATCCGGCTCAACTCCGGCGGCAAGGA---CAAGC
GCCGCTCCAGCATCCACGACATCACCACCGTCAACATTCC---CGACGACGACCACGCCAGCAACACCAACCCCTCGCCG
TCGCCGCCCTCCGCGCTCACC-----------------------------------------------------------
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----------------------------------------------
>SNPs
SS-S---S----------------S--S------------------S-S-------------------------------
--------------------S-------------S----------------------S-----S----------------
-----------------S-S-----------S-------------------------S------S---------------
-----------------S--------------SS---S--S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S-S-S-----S-----------SS-S---------------------SS----------
----------------------------SS----------------------------S---S-----------------
-S-------------------S----------S------------------S------S-SS-S----------------
--------------------------------S-------------------S---S----S------------------
--S-------S---------------S---S---S----S------S-----------S---------S-------S---
----------S-------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
----------------------------------------------------S---------------S-----------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------S-----------
---S--------S-----------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S----------------------------S---S-SSS-SS---------------------------
------------------------------------------S----S--------------------S-----------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-----S-
---------------------------------------S----------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------S-----------SS--S-------------
------S-S--S--S-----------------------------------------------------------------
S-------------------------------------------------------------------------------
S-----------------S---------------------SS--------SSS-SSSSS---------------------
--------------SS-SS-----------S---SSSS-SSS-SSSSS-S--SSSSSSSSSSSSSSSSSS----S--S--
--SS-----S------S--S-----------------S----S-SSS-S-SSSSS-S---S-S--SSSSSSSSSSSSSSS
SSSS-----------------S------SS-S------------------------------------------------
-----------------------------SSSSS----------------------------------------------
--------------SSSS-------------S--------------------------S---------------------
---------------------------S----------------------------------------------------
--S---------------------------------------------------------------S-------------
-----------------------S--------------------------------------------------------
--------------S----------S-------------------------------S----------------------
--------------------------------S-----------------------------------------------
-S--S-----S--------SSSS-SSS--------S------------------------------S-------------
------------------------------SSSSSSSSSSSSSS----S-------------------------------
--------------S------S-------------------S--S-------------SSSSSSSSSSSSS---------
--S---------------------------------------S--S
>forward_1135
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---------------------------------------------------------------------------CAAGG
CCCAATCACAAGCAC-----------------------------------------------------------------
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>reverse_2795
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------CGCACC
GGTGTGAAATTTGG------------------------------------------------------------------
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