>input_sequence_53186
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-------------ATGGGGACGAGGAGCGGCTCTCTCTATACCTGCGGAGGAACCGGCGAGCCGGCGGCTCCGGTGGCCG
GGCAGAAGAGGAAGAGGTCTCCCGCCGCCGCCGGCGAGGCATCCGGCGTGCGCCGGAAGAGGCAGGCTACCGGGCCGGAC
TACTTGGACGGCATCCCTGACGACCTCGTGCTGTCCATCTTCTCCAAACTCGCCGCATCTGCGAACTCCCCCTCCGACCT
GCTGTCCGTCCACCTAACGTACGCCCGCGCCCCGCCCCGCCCTTCGTGTTTGGTTCAACTGCTTCTTGCAAAGGAACTCC
TGCTGCTTTGTCTGTATGGTTGCCTGAACGTGTTTGTGCCTTTGACGTTTCAGGTGCAAGAGGCTCAACGGCCTGGGGCA
GCAGGACATGGTGTTCGCCAAGGCCTCGCCGGCGTCGCTCGCCGTCAAGGCGGCGGCCTGGTCCGAGCTCGTGCAGCGGT
TTCTCAAGCGCTGCGCCGACGCCGGCAATCTTGAGGCTTGCTACATTCTCGGCATGGTACGTGTTGATGACCT----AAT
CTAGTTGACTTGATCGTTCGGTTTGACATCCGTGCATGCATGGCCGGAGTTTCAGGGGTGGAGTGCTGACGAGTTCCTTA
CGTTTTTGCAGATCCGGTTCTACTGCCTTGGCAGCCGCAGCGGCGGCGCGGCTCTGCTCGCGAAGGCGGCCGTCGGCGGG
CACCCGGCGGCGCTGTACTCGCTGGCCGTCATCCAGTTCAACGGGAGCGGGGGCGCCAAGTCGGACCGCGACCTGCGCGC
CGGGGCGGCGCTCTGCGCGCGCTCCGCCGCGCTGGGCCACGTCGACGCGCTCCGGGAGCTCGGGCACTGCCTCCAGGACG
GCTACGGCGTGCGCCGCGACCCGGCCGAGGGCCGCCGCCTCCTCGTCGCCGCCAACGCCCGCGAGCTCTCCCTCGCGCTC
GCCGCCGCGGCGGCAAGCGCAACCTACCCCTTCGCCTCCCTCCCCATCGGCGCCGTTGCAGGCGGCGCCGGCGGCGTCAC
CAGCAGCCCCCTC---CTCTCCGACTTCGGGTGGAGCCTGCCGGAGGCAGAGCCGCACACGGCGAACCAGTTCATGTCAG
ACTGGTGGGCGTCGCGCGGCGTGCAGGCGTGCGCCAAGAAGACCGACGCGGCGGCCACCGGCGGAGACGGCGAGGGCGAG
CTGCGGCTGTGCTCCCACATGCGGTGCGGGCGCAAGGAGACGCGGCGGCACGAGTTCCGGCGCTGCTCCGTGTGCGGCGC
GGCCAACTACTGCTCCCGCGCGTGCCAGGCCCTGGACTGGAAGCGCGCCCACAAGGCCCAGTGCGTGCCCATGGACCGCT
GGCTCGTGGGCGGCGCCGC------CGCCGCGCCGCAGCAGTGA------------------------------------
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>chr3A_1_TraesCS3A01G429900
AACTGGTTTTCGTGGATGGACCGATCGATCGGCCTTTGCCACAACCTTGTCGTACTCGTACTAGAACAAGAAGAGGAAGG
----GTTGCGTCCACAAGGAAAGCAA----------AGAGATCCGCTCGAGGTTGGAACC---GATGCTGCATCAGCAAA
GGAGACAACGAGTAGCGTCCAAACCGCCCCCGTCGCATCAAGCCGAGCACACACGAGACTGCTAGTACTCGTTAATCGCT
AGCATACTCTACTGCCACTAGCATAGCATCGACCTTCACAGT--------------------------------------
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-------------------------CCAAGCCTGGGCCGAAAGCGTTTATGTCGTGAGCTCAGAAACGCCGCCGCATGCA
CAGCCCAG------CCCCGAGTGCCTTCACGTTTCCGTTCATCTTCGACCCGAT-----GCAATAAACGCAACGCACGCC
CCGTCCAGCACTCCACCCATTCCCCGTACTCTACCCCCCTCCTACTCGAAGTATAACGCGTACGGTACTGGTATTATGGA
CTCCCGGTAACGCCACCGTTTGACCACCGAAGCAAGTAAAAATTTACCGG----AAAGCGCACGCAATGAAGAAAGGAGC
CCTACGTATGGCCATGGAAACTGCCTGGCGTCGTGAATGAATGAATGAG----CGAGCAATAATGCCCGTTTTTTTCGCA
GCAAAGCTGGCTTTTTT----------GCATTCATTTTCCTCCAAAGATAAAGCCCGGCCAAGCCAGCATTGATGCCTCT
ACGCCTGCGCCCTGCTGCTCGCACGCC-----------ACTCCACCAGTGGCATGGCACGCACTGGCAGGGCAGTAGATA
GAAAGTTTAAAAAGCGGGACGGATAAAACCAGGACCCGCCTGACATCCGGGCCCCGCA----------CGCCTC------
---------------ACGCAGCGAGGCACGGTACGGACCGGGGAGCGCCGCGCTGCCGTGTATAAAACCAGGCGCCTCCC
GCTATCCCTTTTCCCAAACAT------------CAATCTCCTCTCCACTCCACCACCGCTTCTCCTTCTCC---------
--------------CCCTCCCGC-------------------------CGGAGACCTGCCCGCCACCACG--GCTCGTGC
CGCCAGAGATAAGATGGGGACGAGGAGCGGCTCTCTCTATACCTGCGGAGGAACCGGCGAGCCGGCGGCTCCGGTGGCCG
GGCAGAAGAGGAAGAGGTCTCCCGCCGCCGCCGGCGAGGCATCCGGCGTGCGCCGGAAGAGGCAGGCTACCGGGCCGGAC
TACTTGGACGGCATCCCTGACGACCTCGTGCTGTCCATCTTCTCCAAACTCGCCGCATCTGCGAACTCCCCCTCCGACCT
GCTGTCCGTCCACCTAACGTACGCCCGCGCCCCGCCCCGCCCTTCGTGTTTGGTTCAACTGCTTCTTGCAAAGGAACTCC
TGCTGCTTTGTCTGTATGGTTGCCTGAACGTGTTTGTGCCTTTGACGTTTCAGGTGCAAGAGGCTCAACGGCCTGGGGCA
GCAGGACATGGTGTTCGCCAAGGCCTCGCCGGCGTCGCTCGCCGTCAAGGCGGCGGCCTGGTCCGAGCTCGTGCAGCGGT
TTCTCAAGCGCTGCGCCGACGCCGGCAATCTTGAGGCTTGCTACATTCTCGGCATGGTACGTGTTGATGACCT----AAT
CTAGTTGACTTGATCGTTCGGTTTGACATCCGTGCATGCATGGCCGGAGTTTCAGGGGTGGAGTGCTGACGAGTTCCTTA
CGTTTTTGCAGATCCGGTTCTACTGCCTTGGCAGCCGCAGCGGCGGCGCGGCTCTGCTCGCGAAGGCGGCCGTCGGCGGG
CACCCGGCGGCGCTGTACTCGCTGGCCGTCATCCAGTTCAACGGGAGCGGGGGCGCCAAGTCGGACCGCGACCTGCGCGC
CGGGGCGGCGCTCTGCGCGCGCTCCGCCGCGCTGGGCCACGTCGACGCGCTCCGGGAGCTCGGGCACTGCCTCCAGGACG
GCTACGGCGTGCGCCGCGACCCGGCCGAGGGCCGCCGCCTCCTCGTCGCCGCCAACGCCCGCGAGCTCTCCCTCGCGCTC
GCCGCCGCGGCGGCAAGCGCAACCTACCCCTTCGCCTCCCTCCCCATCGGCGCCGTTGCAGGCGGCGCCGGCGGCGTCAC
CAGCAGCCCCCTC---CTCTCCGACTTCGGGTGGAGCCTGCCGGAGGCAGAGCCGCACACGGCGAACCAGTTCATGTCAG
ACTGGTGGGCGTCGCGCGGCGTGCAGGCGTGCGCCAAGAAGACCGACGCGGCGGCCACCGGCGGAGACGGCGAGGGCGAG
CTGCGGCTGTGCTCCCACATGCGGTGCGGGCGCAAGGAGACGCGGCGGCACGAGTTCCGGCGCTGCTCCGTGTGCGGCGC
GGCCAACTACTGCTCCCGCGCGTGCCAGGCCCTGGACTGGAAGCGCGCCCACAAGGCCCAGTGCGTGCCCATGGACCGCT
GGCTCGTGGGCGGCGCCGC------CGCCGCGCCGCAGCAGTGACCCGCCCCAACGGGCAACC---------ACC----G
CTGCAACTAGCAGCACCGGAGAGTCCACCGCCCGACCGGTGGACCGGGCGTAGCGGAGCGAACGAACGATGATGAATGAG
GAAGCGTTTTTCTGGCGTTTTGCTTTCTTTTTTGCGGCCGTTTGGGTGTCGTCTTGTCAGATGTACGTACTCTACTCTAC
TCGGGAAGAAGAGCAGACGAGAGATTCTACCGCGGCCACCCACCAGAACTCTAGCCTTTGTTTTCCTAATCTTTCTCTCT
CTTTTCCGTACTCAATTAGTTAGCCCCTCTTAAATCAATCAAATTACTCCCCTGGTAAGATGGTAAAAAAAACCTGGATC
CCGCTTCGAACTCATTTTCTAGAGCTCG-------AGCGCGGAAGCTGCTTCTGTCGCTTTGTG-TTTTGGAGTTTTGGA
TGGATGCTGTGGGGGGTGGAGTACAAGAGCAGTGCTCCATGTACACTAC------GTACAGCACGGGCTCCTACGCTACG
TGCCTCTCGTCCGTAGCTTATCGGATGGGAGCACTGCTACACACACGATAAATTCATGCACGATCTGCGCACGACAACAC
ATCTACACCCTTGGGTTGCCTCGTTTCGTAAATCTCTGTGGCCCAAATCATGTCGTGTGTGGATCGTGCATGCACGGATC
GTGTGCACAGCACTTCCGATCGGATGATGAGTAGG-GGGAATCGGTGGCCGCGCCGTGCAGCGCTGCTGCGGCCTGCGGC
ATAGTGTAGGCTTTGGTCTTGCTCTCGAGGCACGGGACAAGTTGGAGCCTTCCCTCTGGCCGCTGGTGCGCTGGGCTTCG
GGAGGTGGAATCCATGTAGGCCACCATAGACATAGCCAAAGTGACACCACCCGGCCGGCTTTTGTTCTCATTTCCTTTA-
--CTTTTCTGTTACCTAGGG----------AGGA-----------CATGGATGGAAACAACACACAAGATGATGACGATG
CTACG---TACTACCACGACTAGCCAAGCCCGCTCCG-TTCTTATATGGCTTGAGCGGAC
>chr3B_38
-------------------------------------GCCATAACCTTGTCGTACTCGAACTAGAACAA------GAAGG
----GTTGCGTCCAGAAGGAAAGCAGAGCAA---AGAGAGATCCGTTCGAAGTTGGAACC---GATGCTGCATCAGCAAA
GGAGACAAAGAGTAGCGTCCAAACCGCCCCCGTCGCATCAAGCCGAGCACACACGAGACT------ACTCGTTGATCGTT
AGCATACTCTACTACCACTAGCACAGAAG-----TTAACAGTCTAAGAGCATCTCCAACAGCCGCGCTAAAGCGCCGCGC
GCAAAAAATCTGTTAGCGCGCGCGCTGCGGCTGGTTTTGCGCGCCCGCCTGCGCTGGCTCCAGCAGCGGCGCTATAATGC
AGCGCGCGCGCTGCTCCAGCAGGGCGCAAAAATACAGCGCGCGTGCCGCACAAACCACATGTACATTTCAAAGAAGATGA
GCAAAAATGATCAAACAAACAAAATAAAAATCAATAATAAATAGTTCAAAATAAATCATTACAACTCAAACAAATAGTTT
ATCGTTTAGTACAACAACAAATAGTTCAAAATAAATTATTACAACACAACAAATAGTTCATGAACAATACAATGTCGAGT
GCAGATATCATCATGCTCTTTGCCGTCCATGCCATGTCCACCACTCTTCAATTAGATCATTCTGAAGTTCCTTGTGCGTT
GCGGGACGCCGAATGGCATGATAGGAGGCAACAAAACGGGCTACCCTTTCAGCCCTCCGCCGCACTCGCACGGGATGTCC
CAAGAGCTCATACTGTGAGTAGTCTAAATCGTGTCCACGCTCATTCTTGATGATCATGTTGTGCATGATCACACAAGCGT
GCATGATGTACCAAAGCATTTTTTGATCCCAAAATCTTGCCGGTCCTCTCACAATAGCAAATTGGGCTTGCAAAATCCCA
AATGCTCTCTCCACATCTTTTCTAGCCGCCGCCTGAGCATTGTGGAAATCAAGATTTTTCTTACCTTCCGGTTTTTTCAA
CGGCTTCACGAAGGTTTGCCACTTTGGATAGATGCCATCCGCTAGATAATAGCCATAGTTGTACGTACGGCCATTTGCTA
CAAACTGCACAGGTGGCAACTCACCGTTTGCAATCTTATTCATCAGTGGTGACCGGTTGACAACATTAATATCATTCAAA
GATTCAGGCATTCCAAAGAATGCATGCCAAAGCCAAGTCTCCTGATCGGCCACCGCTTCAAGAATTATAGTGGAACCCTT
TTTTTGGCCGTGGAATTGCCCATGCCATGCCTTTGGACAATTCTTTCAACTCCAATGCATGCAATCTATTGAGCCAAGCA
TGCCAGGAAAGCCGCGCGCTTTGTTCATCGCCAATAGCCTTGCGACGTCTTCAGCAGTGGGAGATCTCAAATACTCCTCG
CCAAACACTTGCATAATTCCCACTGCAAAGCGCTTGACACACATGATGGCTTGGATCTCACCCATAGCCAAATGATCATC
AACTAGATCAGCCGGGATACCGTATGCCAACATACGCAAAGCGGCTGTCACCTTCAAAAAAGTGCTATGCCCGAGCTCTT
CGGCGGCATTCCTCCTTTGCTGGGAAAACCGGTCATGGCTCGCTAGTTTCTCTGCAATGCGCCTGAACAAGTCGGTGCTC
ACCCTAAACCGGCGACGAAAATACGACTCCGGGTATGTGGGATTCTCCACGAAATAGTTCTTCATCAATCTGTTATGTGC
ATCAATCATATCTCTCCAAATTTTCTCCCGACCCATAACCGAACCACCGTGCTTCGGTTTTTTATTGATATGCATAGCTA
CGATCATTGCAAGATCCTCCTCCTCTTCCATATCAAATTCTTCTTCGGAAGAATCATACGACGAACTCATCTACAATGTT
CAATACTATACTATAAAAACTACAATTCAAAACATGCACCAAAATCAATGAAGTTTGAGCAATACATACCTTGTAGGCGT
TTTGTCAAACACCTTGCGGGCGCGGCGTGGCAGCGAGCGCTCGGGCGCTGTTCCTCGGACGACGGAGGCGCGCGGGCTCC
GGCGGTACTAGGAGGGGATGGGCGGAAGCGCGGGCGCGCGGGGATAGGCCGGGGAAGCCTGGGACGGTGGCCGGGGTGCG
CGGACGGCGGCGGCGGCGCGGCCGGTCGGGGGTGGAAGCGCGAGAGGAAGAGCGGGCGCGAGCGCTCGAGTGTGCCGCTC
GCTGTAGTGGGCGTCCGTAATACGCCACGCGGGTAAGTGTTTTTCACCGCGCGTCCAACCCGTTTTAGCGCGCGCGCTGT
TTTTGCGCGCCCACTGGAGCGCCCTGACGCGTTGCGCGCGTGCTAAAACGACCTATTTTGCGACGCGGCACTAGTTTAAT
GCGGCTGTTGGAAATGCTCTTAAGCCTAAGCCTGGACCGAAAGCGTTTATGTCGTGAGCTCAGAAACGCCGCCGCATGCA
CAGCCCAG------CCC-GAGTGCCTTCACGTTTCCGTTCAACTTCGACCCGAT-----GCAATA-----AACGCACGCC
CCGTCCAACACTCCACCCATTGCCCGTACTCTACCCTCCTCCTCC---AAGTAGAACACGTACGGTACTGGTGTTATGGA
CTCCCGGTAACGCCACCGTTTGACCACCGAAGCAAGTAAAAATTTACCAACTGAAAAGCACACGCAATGAAG----GAGC
ACTACGTATAGCGATCGAAACTGCCTGGCGTCGTGAATGAATGAATGAATGAACGAACAATAATGCCCTTGTTTCTCGCA
GCAAAGATGGCTCTTTTTGAAAGCCCGGCATTCATTTTCCTCCAAAGATAAAGCCCAGCCCAGCCAGCATCGATGCCTCT
ACGCCTGCAGCCTGCTCCTCACACGCCATCAAGACTATACTCTACCACTGGCAGGGCATGCACT-----GGCAGGGCATG
CAAAGTT--AAAAGCGGGACGGATAAAACCAGGACCCGGCTGACAGCCGGGCCCCGCA----------CGCCTCGCCCCC
GGCTCACGCAGGGTCACGCACCAAGGCACGGTACGGACCGGA---------GCTCCCGTGTATAAAACGAGGCGCCTCCC
GCTATCCCTTTTCCGAAACAT------------CTATCTCCTCTCCACTCCACCACCGCTTCTCCCCGTCCCGCGGCCGC
TCCCTCTCCTCCCTCCCTCCCTC-------------------------CGGAGACCGGCCCGCCACCACG--GCTCGCGC
AGCCAGAGATAAGATGAGGACGAGGAGCGGCTCTCTCTATACCTGCGGAGGTGTTGTCGAGCCAGCGGCTCCCGTGGCCG
GCCAGAAGAGGAAGCGCTCGCCCGCCGCCGCCGGCGAAGTGTCTGGTGGGCGCCGGAAGCGCCAGGCTTCGGGGCCGGAC
TATTTGGATGGCATCCCTGACGACCTCGTGCTCTCCATCTTCTCCAAACTCGCCGCATCTGCGAACTCACCGTCCGACCT
GCTGTCCGTCCACCTAACGTACGCCCGCGCCCCGCCCCGCCCTTCGTGTTTGGTTCAACTGCTTCTTGCCAAGCAACTCC
TGCTGCTTCATGTGTTTGGTTGCCTGAACGTGTTTGTGCCTTTGACGTTTCAGGTGCAAGAGGCTGAACGGCCTGGGACA
GCAGGACATGGTGTTCGCCAAGGCCTCGCCGGCGTCGCTCGCCGTCAAGGCGGCGGCGTGGTCGGAGCCCGTGCAGCGGT
TTCTCAAGCGCTGCGCCGACGCCGGCAACCTCGAGGCTTGCTACATTCTAGGCATGGTAAGAGTCGACGAACA----AAT
CTTGTTGACTTATCGTTCGGGTTTGACATCCATGCATGCATGGCCGGAGTGTCAGGGATCAAGCGCTGACGAGTTTCTTA
CGTTTTTGCAGATCCGGTTCTACTGCCTTGGCAGCCGGAGCGGTGGAGCGGCTCTGCTCGCGAAGGCGGCGGTCGGCGGG
CACCCGGCGGCGCTCTACTCGCTGGCCGTCATCCAATTCAACGGGAGCGGTGGTGCCAAGTCGGACCGCGACCTCCGCGC
CGGGGCGGCGCTCTGTGCGCGCTCCGCCGCGCTGGGCCACGTCGACGCGCTCCGCGAGCTCGGGCACTGCCTCCAGGACG
GCTACGGCGTGCGCCGCGACCCGGCCGAGGGACGCCGCCTCCTCGTCGCCGCGAACGCCCGCGAGCTCTCCCTCGCGCTC
TCCGCCGCGGCGGCCAGCGCGACCTACTCCTTCGCCTCCCTCCCCATCGGCGCCGTCGCAGGCGGCGCCGGCGGCGTCAC
CAGCTCTCCTCTC---CTCTCCGACTTCGGGTGGAGCCTGCCGGAGGCGGAGCCCCACACGGCGAACCAGTTCATGTCAG
ACTGGTGGGCGTCGCGTGGCGTGCAGGCATGCGCCAAGAAGACCGACACGGCGGCCACCGGCGGAGACGGCGAGGGCGAG
CTCCGGCTGTGCTCTCACATGCGGTGCGGGCGCAAGGAGACGCGGCGGCACGAGTTCCGGCGCTGCTCGGTGTGCGGCGC
GGCCAACTACTGCTCCCGTGCGTGCCAGGCCCTGGACTGGAAGCGCGCCCACAAGGCCCAGTGCGTGCCCATGGACCGCT
GGCTCGTCGGCGCCGCCGC------CGCCGCCCCCCAGCAGTGACCCGCCCCAACGGGCAACCGCCGCGGCAACG----G
CAACAAGTAGCAGCACCGGCGAGTCCATGGCGCGGCCGGTGGACCGGGCGTAGCGGAGTGAACGGCGG-TGATGAATGAG
GAAGCGTTTTTCTGGCGTTTTGCTTTCTT-TTTGCGGCCG-TTGGGTGTCGTCTTGTCAGATGTACGTACTCTACTCTAC
TAGGGAAGAGGAGCAGACGAGAGATTCTACCGCGGCCACC----AAAACTCTAGCCTTGTTTTCTTAATTAGTCCCTATT
TTCTTTTTTTAGGGGGAAATTAGTCCCTCTTTCTTTAAATTAAATTAAGTTACTCCGTAATATG---AAAATCCTGGATC
CCTCTTTGAACTAATTTTCTACTAGAGTTCTACCAAGTGTAGACGTTGCTTCTGTCGCTTTGTGCTTTTGGTGTTTTGGA
TGGATGCTGTGGGGTGTGGAGTAGAAGAGCAGTGCTCCAGCACTCCATGTACGTGGTACAGCACGGGCTCCTACGCTACG
TGCCTCA----CGTAGCTTATCG---------------------------------------------------------
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-------------------------GATGAGTAGGCGGGAATCGGTGGCCGCGCCGTGCAGCGCTGC----------GGC
GTCGTGTAGGCTTTGGTTTTGCTCTCGAGGCACGGGACAAGTTGGAGGCTTCCCTCTGGCCGCTGGTGT--TGGACCTTG
GGAGGTGGAATCCATGTAGGCCACCATAG------CCAAAGTGACACCACCCAGCCGGCTTTTGTTCTTATTTCCTTTA-
--CTTTTCTGTTACCTAGGC----------AGGACAGGGCAGGGCCATGGATGGAAACAACACACAAGATGATGACGATG
CTACGTAGTACTACCACGACTAGCCAGCCCGCTCTGTTTTTTTATATGGCTCGAGC----
>chr3D_38
-------------------------------------GCCATAACCTTGTCGTACTCGTACTAGAACAA------GAAGG
AAGGGTTGCGTCCACAAGGAAAGCAAAACAGAGGAGAGAGATCCGTTCGAAGTTGGAACCGATGATGCTGCATCAGCAAA
GGAGACAAAGAGTAGCGTCCAAACCGCCCCCGTCGCATCAAGCCGAGCACACACGAGACT------GCTCGTTGATCGTT
AGCATACTCTACTGCCACTAGCACAGAAG-----TTAACAGT--------------------------------------
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-------------------------CTAAGCCTGGGCCGAAAGCGTTTATGTCGTGAGCTCAGAAACGCCGCCGCATGCA
CAGCCCTGCACAGCCCC-GAGTGCCTTCACGTTTCCGTTCAACTTCGACCCGATCGTTCGCAATA-----AACGCACGCC
CCGTCCAACACTCCACCCATTCCCCGTACTCTACCCTCCTCCCT---GAAGTAGAACGCGTACGGTACTGGTATTATGGA
CTCCCGGTAACGCCACCGTTTGACCACGGAAGCAAGTAAAAATTTACCAACTGAAAAGCACACGCAATGAAG----GAGC
GCTACGTATGGCGATGGAAACTGCCTGGCGTCGTGAATGGATGAACGA----ACGAGCAATAATGCCCTTATTTCTCGCA
GCAAAGATGGCTTTTTTTGAAAGCCCGGCATTCATTTTCCTCCAAAGATAAAGCCCAGCCCGGCCAGCATTGATGCCTCT
ACGCCTGCAGCCTGCTGCTCACACGCCATCAAGACTATACTCTACCACTGGC-GGGCATGCACT-----GGCAGTAGATA
GAAAGTT--AAAAGCGGGACGGATAAAACCAGGACCCGGCTGACAACCGGGCCCCGCA----------CGC---------
--CTCACGCAGGGTCACGCACGACGGCACGGTACGGACCCGGGAGCGCCGCGCTGCCGTGTATAAAACGAGGCGCCTCCC
GCTATCGCTTTTCCGAAACATCTATCTCCTCTCC--TCTCCTCTCCACTCCACCACCGCTTCTCCTTCTCC---------
--------------CCGTCCCGCGGCCGCCCCCCCTCCTCCCTCCCTCCGGAGACCGGCCCGCCACCACG--GCTCGTGC
GGCCAGAGATAAGATGAGGACGAGGAGCGGCTCTCTCTATACCTGCGGAGG---TGTCGAGCCAGCGGCTCCCGTGGCCG
GGCAGAAGAGGAAGAGGACGCCCGCCGCCGCCGGCGAAGTGTGCGGTGGGCGCCGGAAGCGACAGGCTTCCGGGCCGGAC
TATTTGGATGGCATCCCTGACGACCTCGTGCTCTCCATCTTCTCCAAACTCGCCGCATCTGCGAACTCCCCCTCCGACCT
GCTGTCCGTCCACCTAACGTACGCCCGCGCCCCGCCCCGCCCTTCGTGTTTGGTTCAACCGCTTCTTGCCAAGCAACTCC
TGCTGCTTCGTGTGTTTGGTTGCCTGAACGTGTTTGTACCTTTGACGTTTCAGATGCAAGAGGCTCAACGGCCTGGGCCA
GCAGGACATGGTGTTCGCCAAGGCCTCGCCGGCGTCGCTCGCCGTCAAGGCGGCGGCGTGGTCGGAGCCCGTGCAGCGGT
TTCTCAAGCGCTGCGCCGACGCCGGTAATCTTGAGGCGTGCTACATTCTAGGCATGGTAAGAGTCGACGAACACATCAAA
CTTGTTGACTTGATCGTTCGGTTTGACATCCATGCATGCATGGCCGGAGTTTCAGGGAGTAAGTGCTGACGAGCTTCGTG
CGTTTTTGCAGATCCGGTTCTACTGCCTTGGCAGCCGGAGCGGTGGCGCGGCTCTGCTCGCGAAGGCGGCTGTCGGCGGG
CACCCGGCGGCGCTCTACTCGCTGGCCGTCATCCAGTTCAACGGCAGCGGGGGCGCCAAGTCGGACCGCGACCTGCGCGC
CGGGGCGGCGCTCTGCGCGCGCTCCGCTGCGCTGGGCCATGTCGACGCGCTCCGCGAGCTCGGGCACTGCCTCCAGGACG
GCTACGGCGTGCGCCGCGACCCCGCCGAGGGACGCCGCCTCCTCGTCGCCGCGAACGCCCGCGAGCTCTCCCTCGCGCTC
GCCGCCGCGGCGGCCAGCGCGACCTACCCCTTCGCCTCCCTCCCCATCAGCGCCGTCGCAGGCGGCGCCGGCGGCGTCAG
CAGCAGCCCACTC---CTCTCCGACTTCGGGTGGAGCCTGCCGGAGGCGGAGCCCCACACGGCGAACCAGTTCATGTCAG
ACTGGTGGGCGTCGCGCGGCGTGCAGGCGTGCGCCAAGAAGACCGACGCGGCGGCCACCGGCGGAGACGGCGAGGGCGAG
CTACGGCTGTGCTCCCACATGCGGTGCGGGCGCAAGGAGACGCGGCGGCACGAGTTCCGGCGCTGCTCCGTGTGCGGCGC
GGCCAACTACTGCTCCCGCGCGTGCCAGGCCCTGGACTGGAAGCGCGCCCACAAGGCCCAGTGCGTGCCCATGGACCGCT
GGCTCGTCGGCGCCGCCGCCAACGCCGCCGCGCCCCAGCAGTGACC-GCCCCAAGGGGCAACCGCCGGCGCAACGTCCGG
CAACAAGTAGCAGCACTGGAGGGTCCACGGCGAGGCCCGTGGACCAGGCGTAGCGGAGTGAACGACGG-TGATGAATGAG
GAAGCGTTTTTCTGGCGTTTTGCTTTCTT-TTTGCGGCCGTTTGTGTGTCGTCTTGTCAGATGTACGTACTCTACTCTAC
TAGGGAAGAGGAGCAGGCGAGAGATTCTACCGCGGCCAGC----AGAACTCTAACCTTGTTTTCTCTCTTTTAAATTAAT
TATTAT----------AAATTAGCCCCTCTTAAATTAATTAAATTACTCCCCTGGTAAGATGGTAAAAAAGCCCTGGATC
CCGCTTCGAACTCATTTTCTAGAGCTCG-------AGCGTGGAAGTTGTTTCTGTCGCTTTGTG-TTTTGGTGTTTTGGA
TGGATGCTGTGGGGTGTGGAGTAGAAGAGCAGTGCTCCGGCACTC----TACGTAGTACAGCACGGGCTCCTACGCTACG
TGCCTCTCGTTCGTAGCTTATCG---------------------------------------------------------
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-------------------------GATGAGTAGG-GGGAATCGGTGGCCGCGCCGTGCAGCGCTGC----------G--
-TCGTGTAGGCTTTGGTTTAGCTCTCGAGGCACGGGACAAGTTGGAGGCTTCCCTCTGGCCTCTGGTGT--TGGACTTGG
GGAGGTGGAATCCGTGTAGGCTACCATAG------CCAAAGCGACACCACCCAGCCGGCTTTTGTTCTTGTTTCCTTTAT
TACTTTTCTGTTACCTAGGCAGGGCAGGGCAGGA-----------CATGGATGGAAACAACACACAAGATGATGATGCCA
TCGCTACGACTA------------------------------------------------
>chr3B_750
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---------------------------------------------------------------------GGCAGTAGATA
GAAAGTT---AAAGTGGGACGGATAAAACCAGGACTAGGCTGACATCCGGGCCCCGCACGCCTCGCCTCGG---------
--CTCACGCCGGGTCACGCACCAAGGCACGGTACGGACCGGA---------GCTCCCGTGTATAAAAGGAGGCGCCTCCC
GCTATCCCTTTTCCGAAACAT------------C--TCTTCTCTCCACTCCTCCGCCGCTCGCTCCG-------------
----------------CTTCTCC-------------------------CCGTGACCGGCCCGCCACCACGCGGCTCGTGC
AGCCAGAGATAAGATGAGGACGAGGAGCGGCTCTCTCTATACCTGCGACCA------------AGCGGCTCCCGTCGCCG
GGCAGAAGAGGAAGAGGTCGCCTGCCGCCGCCGGCGAGGGATGCGGCCTGCTTCGGAAGCGGCAGGCTGCGGGGCCGGAC
TTTTTGGATGCCATCCCTGATGACCTCGTGCTGTCTATCTTCTCCAGGCTCGCCGCATCTGCAAACTCCCCGTCCGACCT
GCTGTCTGTCCACCTAACGTACGCCCCCACCCT---CCGCCCTTCGTGTTTGGTTCAACTGCTTGTTGCTT---------
-----CTTCGTCTGTATGGTTGCCTAAACGTGTTTGGGTCTTTAACGTTTCAGGTGCAAGAGACTGAACGGCCTGGGACA
ACAGGACATGGTGTTCGCCAAGGCCTCGCCGGCGTCGCTGGCCGTCAAGGCGGCGGCGTGGTCGGAGCCCGTGCAGCGGT
TTTTAAAGGGCTGCGCTGACGCCGGCAACCTTGAGGCTTGCTATATTCTCGGCATGGTAAGAGTCGAACAAAACA-----
---GTTGACTTGATC-----GTTTGACATCCATGCATGCATGGCCGGAGTTTCAGGGATTAAGTGCTGACGAGCGTCGTG
CGTTTTTGCAGATCCGGTTCTATTGCCTTGGCAGCCAGAGCGGCGGCGCGGCTCTTCTCGCGAAGGCGGCGGTCGGTGGG
CACCCGGCGGCGCTCTACTCGCTGGCGGTCATCCAGTTCAACGGGAGCGGTGGCGCCAGGTCGGACCGCGACCTGCGCGC
CGGGGCGGCACTCTGCGCGCGCTCCGCCGCGCTGGGCCACGTCGACGCGCTCCGCGAGCTCGGGCACTGCCTCCAGGACG
GCTACGGCGTGCGCCGCGACCCGGCCGAGGGCCGCCGCCTCCTCGTCGCCGCCAACGCCCGCGAGCTCTCCCTCGCGCTC
GCCGCCACGGCGGCCAGTGCGGCCTACCCCTTCGCCTCCCTGCCCATCGGCGCCGTCGCGGGCGGCGCCGGCGTTGGCGT
CTGCAGCTCCCCTCTTCTCTCGGACTTCGGGTGGAGCCTGCCGGAGGCAGAGCCGCACACGGCGAACCAGTTCATGTCGG
ACTGGTGGGCGTTGAGCTGCGTGCAGGCGTGCGCCAAGAAGCCCGAGGCGGCGACCACCGGCGAGA---GCGAGGGCGAG
CTACGGCTGTGCTCCCACATGCGGTGCGGGCGCAAGGAGACGCGGCGGCACGAGTTCCGGCGCTGCTCCGTGTGCGGCGC
GGCCAACTACTGCTCCCGCGCGTGCCAGGCCCTGGACTGGAAGCGCGCCCACAAGGCCCAGTGCGTGCCCA---------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S---------------------------SSSSSS-----
---------------------------------------------S----S-----------------------------
--------S---------------------------------------------------SSSSSS-------S----S-
-----------------------S--S-SSSSSS--S-------------------------------------------
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--------------------------S-----------------------------------------------------
-----------------S-----------------------S-----------------------SSSSS----------
-------S----------------------------S------S-SS------S--------------------------
------------------------------------------------SS---------S------------SSSS----
S-----------S-----------------------------------S-------------------S-S---S-----
------S-------------------------------------------------S---S-------------------
--------SS----------S---------------------S----S-----S----S-----SSSSS-----------
-------SS-----------------------------S-----------------------------------------
--------------------S-S---------------------------------------------S-----------
--------------S-------------------S---------------------------------------------
--------------------------------------------------------S-----------------------
S---------------S----------------------------------SSSS-S------S--------S-------
-------------------S-------------------S-------------------S--------S-----------
--S-----S-----------------------------------------------------------------------
---------------------------------------------------------------------S---S------
--------S--------------------------------------------------------------------S--
---------------------------------------------------------S-----S----S-----------
-----------------------------------------------------------S-S--S--S--S-S-------
--S----------------------------S-------------------------S-SS--------------S----
-------------------------------------S--------------------------------S---------
--------------S-----------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------S-----S-----------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S----S---------------------S---------------------------------------S-----
-SS---S---------------------S--S--S-----------------------S------SS-S-----------
-----------------------------S--------------------------------------------------
-S-------S------------------------------SSSS--------------SS---SS---S-S--S--SSS-
S----SSS-SSSSSSSS-S----------------S---S-------------------------------S--------
---------------------------------------S-----S-------------------------S--------
--------------S--------S---------------SSSSSS-SSS-------------------------------
----------S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------------SSSSSSSSSS---
S-S--------------S-----------------------------S--------------------SSS---S---S-
-----------------------------SSSSSS-----------------S---------------S-----------
-------------------S------------------------------------------------------------
--------------------------SS--SSSSSSS---S----------S----SSSS
>forward_226
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GCACACACGAGACTGCTAGT--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>reverse_3900
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------GGAGTGCTGACGAGTTCCTT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>forward_3135
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CTCCC
GCTATCCCTTTTCCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>reverse_5225
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------ATGGGAGCACTGCTACACAC------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
