>input_sequence_53172
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--------------------------------------------------------------------GATCTGCGCTGC
CGGCTGGCTTGGCTGGGGCG------------GATGGAGGAAGGGCGCGAGGGATGGCCGTGCGCG------GCGGCCGC
GGCGGGGGAGGCGGTGGCGGAGGAGGGGGAGGAGG---ACCAGTTCGACCGCCTGCCCGACGCGGTGCTCCTGGACGTCT
TCAACCGCATCGGCGACGTCAAGGCGCTGGGCCGCTGCGCGCTCGTCTCGCGCCGCTTCCACGGCCTCGTCCCGCTCGTT
GACTCCGTCTTCGTCCGCGTCGACTGCGTCATTCCCGACGAGCCGGCCCCCGCCTCGGCCGGCTCCCCGCAGGCCGCCGC
GCCGTCGCGGGGCCGGGGCGCGC------------------------TCGCCCACATCGCGCGCCTCGTGCTCGGCGGCA
TCGTCAGGCCCATCCAGGCGCTCGGCCAGATCCTCTCCCCCACCCTGGCCATCGT-------------------------
-----CTCCCGCCGCTCCGTGGCCCCGCCGCCCG---CCTCGCCGCCTCCGCCCGCCGGGGACATCTCCCACCACTCGCC
CTCCGAGGTCCTCCGCTCCTTCAAGGAGCTTCGCAGCCTCCGCATCGAGCTGCCCACCGGCGAGCTCGGCATTGACGACG
GCGTGCTCCTCAAGTGGAAGGCCGACTTTGGCTCCACCCTCGGCAGCTGCGTTATCCTCGGCGCGTCCTCTGTGTCGTCC
AAGCCGCTGCTGCCAACAATGTCGTCCCCTGATGCCGCGGACAGCGAGGCTGCATCTCTCGATGACAACAGG--------
----GAGCCTGAAGAATTGGCGAGCATCCCTGAGTCGCTTCATACTAATGGGGGCCTTAAGCTCCGCGTCGTCTGGACCA
TCAGCTCGCTGATTGCTGCATCGGCTCGGCATTACTTGCTGCAGCCAATCATCGCCGATCATGAAATGCTTGATAGCTTG
AACCTAACGGATGCTGACGGGCAGGGTGTGCTCACTATGGACAAGAAGCAGTTACAGGAGCTGCGAGTGCGGCCTGTGTC
GGTTTCTGGCAACTCACACCGCACGCTCATGCCAGCGCTTATTATGAGACTTTGGTATGCTCCACATATTGAACTTCCCG
GGGGAGTACTGCTGAAGGGCGCCACGCTGGTGGCGATCAGACCAAGTGACGATGTGCTGAGGGAGGGGGGAGGGGTTGAG
GCTGCTGGTCCGGCAGGAGCTAGCTGGATCTCAGATGCCTTTGAGGAGCCATATCGAACAGCGGCAAAGGTGCTTTTCAA
GCGGCGGACATACAGCCTTGAAATGAACTCGTTCTGAGCTTCACAGATTTTAACTTTCTAGGAGGTAATTTATCACTTCA
CATGATTATTGCACATCATTACTGCCAGACTATTTAGATCAGTGCTGATGTCCTGTAGCATTGCAGTATCTGGAAGGAAT
CAATGCAGTTTCCTTAA---------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------
>chr3D_1_TraesCS3D01G306000
CACTCAAGCCCAAACTACCGCACTTGATTAGCGTATGGAATAAAATCCACTC--------CGCTTGACGCCGAAGCTTCC
ATCGATCTCCCCGTACCACCGACCAGCCACGCTAGCTAGCGGCCCAGGC---------------CACGTTGC---CCGCC
CTGCCGTGCAGCGGGGACGACGATCGG-GGCCGAAGCGGCGGCGTCAGTTCCGCGGCCAGATTCCTCGCGTGCCCGCTGC
TGCAGCCTGGCTCCCGCCACTCGCACAGCGCATCTTGTCAGTAAGCTCCTCGATCCATATATCGAGCTGTTTCCTCTGAC
AATGCCTCCGCTTCTTCGCTTTGTTTAATCGTCATTATCAGCGCAGGTCACCGCTGAGATCCCGTTCCCATCGATCGCCC
CAAAACACCTGAGAGGCTGAGAATGAGTTAGGAAGCCATTTACGTCCGCACGTACGGTCGATCTGATCCGTCCGTTTCTC
C---AGGATCGGACGGCTCCGGAGGCCCCTGCGACGGGCCATCGGTCCCGGTCTCCGTCAGCCGGCC-----GCGGGGTT
GTTCCTTGCACGGCACCGCGGGCGGCGCGG---CGCGAGGTCAACAACCATGGAAACGTCATGATCCCATCCCCC-----
--------ATTGGCATTG------------------------GGTCGCCGTCGGAATTTTGGTGCGAGAGCGACGGGTTG
AGCCACCGTCTATCTA---------TCTGCAAGGTCAGTCAGGCGTCGCTCCCCTTCCCCCGAGCGAGTCCAAACGCCCG
CACCACAAAGACACCACGGTGGG--------------------GTGGTGGGGTGATCCACACATTAGCATTACCTCCGCG
ATCAGCGGTCGAGCCCGACACGTGACGCGTCGTCGCCCGCACCCACCACCCAAGGGCCAAGGAGAGGGGGGTACCCATTA
CCCAACCCAAAACCAAGACCAAGCGCCCGACCTCGCCTCACGCGCAGCCGCCGTGCCGTGCCCCGTGCCGACTACTCGCT
CGCTCGCT----TCCACCAGAAATCCCCCAACCCGCGGCTGACTCACTCCCGTCTCTCCCCGGATCCCGATCTGCGCTGC
CGGCTGGCTTGGCTGGGGCG------------GATGGAGGAAGGGCGCGAGGGATGGCCGTGCGCG------GCGGCCGC
GGCGGGGGAGGCGGTGGCGGAGGAGGGGGAGGAGG---ACCAGTTCGACCGCCTGCCCGACGCGGTGCTCCTGGACGTCT
TCAACCGCATCGGCGACGTCAAGGCGCTGGGCCGCTGCGCGCTCGTCTCGCGCCGCTTCCACGGCCTCGTCCCGCTCGTT
GACTCCGTCTTCGTCCGCGTCGACTGCGTCATTCCCGACGAGCCGGCCCCCGCCTCGGCCGGCTCCCCGCAGGCCGCCGC
GCCGTCGCGGGGCCGGGGCGCGC------------------------TCGCCCACATCGCGCGCCTCGTGCTCGGCGGCA
TCGTCAGGCCCATCCAGGCGCTCGGCCAGATCCTCTCCCCCACCCTGGCCATCGT-------------------------
-----CTCCCGCCGCTCCGTGGCCCCGCCGCCCG---CCTCGCCGCCTCCGCCCGCCGGGGACATCTCCCACCACTCGCC
CTCCGAGGTCCTCCGCTCCTTCAAGGAGCTTCGCAGCCTCCGCATCGAGCTGCCCACCGGCGAGCTCGGCATTGACGACG
GCGTGCTCCTCAAGTGGAAGGCCGACTTTGGCTCCACCCTCGGCAGCTGCGTTATCCTCGGCGCGTCCTCTGTGTCGTCC
AAGCCGCTGCTGCCAACAATGTCGTCCCCTGATGCCGCGGACAGCGAGGCTGCATCTCTCGATGACAACAGG--------
----GAGCCTGAAGAATTGGCGAGCATCCCTGAGTCGCTTCATACTAATGGGGGCCTTAAGCTCCGCGTCGTCTGGACCA
TCAGCTCGCTGATTGCTGCATCGGCTCGGCATTACTTGCTGCAGCCAATCATCGCCGATCATGAAATGCTTGATAGCTTG
AACCTAACGGATGCTGACGGGCAGGGTGTGCTCACTATGGACAAGAAGCAGTTACAGGAGCTGCGAGTGCGGCCTGTGTC
GGTTTCTGGCAACTCACACCGCACGCTCATGCCAGCGCTTATTATGAGACTTTGGTATGCTCCACATATTGAACTTCCCG
GGGGAGTACTGCTGAAGGGCGCCACGCTGGTGGCGATCAGACCAAGTGACGATGTGCTGAGGGAGGGGGGAGGGGTTGAG
GCTGCTGGTCCGGCAGGAGCTAGCTGGATCTCAGATGCCTTTGAGGAGCCATATCGAACAGCGGCAAAGGTGCTTTTCAA
GCGGCGGACATACAGCCTTGAAATGAACTCGTTCTGAGCTTCACAGATTTTAACTTTCTAGGAGGTAATTTATCACTTCA
CATGATTATTGCACATCATTACTGCCAGACTATTTAGATCAGTGCTGATGTCCTGTAGCATTGCAGTATCTGGAAGGAAT
CAATGCAGTTTCCTTAAGTGGAACTACCTTTTTTT--TCTTGCCAAAATCGAAGTGCATAGAGTGAAACCTAGATTCGCG
CATATTTTATCATTATCTCTAAAGTTCGCCACCTATGTCCGGAAGCGTATATGCTGTTCTGGATTTATTCAATAATAAAG
GATTGGGGTGTATGTTAGCAATATTATTGATTTTTGACTCATTGACATTCTTCTCGTTCGTGAGAGTTATGAAACACGTG
GCAAGGTTTTCCATGCCTCTCCAGTTCTAATGGGTCCCAATTCTGAAGGCTTGGCAGTGAGTTATTGAATCTAACACCGG
CAAATTTTGTATCATTCTTATTGTTATTAATATTACTAATGCCCAACTTGTAGTTTTGTACTAAGTATTACAACTGGCAC
CAATGTTTTGCTTCTCCACAGTTTGGAAGGTTCTAAGAGCCTGATTGACATAACCATAACTATGGGTATTATGCAAACAT
AGCTTGCTTTATGGTGAGCATAACTTGAAATGCTTAGTTTGTTCTCCTTAATCAACAGAGAGTAATGGTAATGGGCACAG
GTCACAGACGAATGGTTTGGGTGATCAGGGTTTCCGGGTGCATTTGTTTTGCATACGTATTTTGGTTAGTGTACTGACAG
GAAAGGATTTAATGTTTATATAATATTTATTTTTACTGCCATTCTGTTGGTTTGCTGGACCATGCACTGATATGGCTCAT
GTGCCACTTTTGGCATGGTAAAGGCACAATATATGAGTTCTTTTCGAAGTCCAGGGTTGTTGAATTGGTCTTACCACAGC
TATTCGTATGT--CTGTTTTAGTTCCTTTCTGTTCCTGCTGGCATGTTTGCTGTGATGCAATTTCTCGAGTATTAGGCAG
GTGGTTACTGGGAATCAATAATCTTTTATGGTTTTTGGAGGTCGTGTTATGATTAGATAGGACAGATAATAATGCTCGCG
CGGTCTTGTCATCTTTACGGGACTTTTGGTTCCCAGCCGATGTTTGCCACTCCTAACTTTA
>chr3B_1
CACTCAAGATCAAACTAACGCACTTGATTAGCGTATGGAATAAAATCCACCCCGCTGCCTCGCTTGACGCCGAAGCTTCC
ATCGATCTCCCCGTACGACCGACCAGCCACGCTCCCGGCCAGCTAGCCCAGGCACAGTAACAGGCACGTTGC---CCGCC
CTGCCGTGCAGCGGGGACGACGATCGGGGGCCGAAGCGGCGGCGTCAGTTCCGCGGCCAGATTCCTCGCGTGCCCGCTGC
TGCAGCCTGGCTCCCACCACTCGCACAGCGCATC-TGTTAGTAAGCTCCTCGATCCATATATCGAGCTGTTTCTTCTGAC
AACACCTCCGCTTCTTCGCTTTGTTTAATCGTCATTATCATCGCAGGTCGCCGCTAAGATCCCGTTCCCATCGATCGCCC
CAAAACACCTGAGAATGAGTTATTACGG-----AGCCATTTACGTCCGCACGTACGGTCGATCTGATCCGTCCATTTATC
C---AGGATCGGACGGCTCCGGAGGCCCCTGCGACGGGCCATCGGTCCCGGTCTCCATCAGCCGGCC-----GCGGGGTT
GTTCCTTGCACGGCACCGCGGGCGGCGCGG---CGCGAGGTCAACAACCATGGAAACGTCATGATCCCATCCCCCCATTG
GCATTGGCATTGGCATTGGGTTGCCGTCA------------------------GAATTTTGGTGCGAGAGCGACGGGTTG
AGCCACCAAATCTATCTATCTCCATTCTCCAAGGTCAGTCAGGCGTCGCCCCAG---------GCGAGTCCAAACGCCCG
CACCACAAAGACACCACGGTGGGGTGGGGTGGGGTGGGGTGGGGTGGTGGGGTGATCCC--------CATTACCTCCGCG
ATCAGCGGTCGAGCCCGACACGTGACGCGTCGTCGCCCGCACCCACCACCCAAGGGCCAAGGAGAGGGCAGGGGGA--TA
CCCAACCCAAAACCAAGACCAAGTGCCCGACCTCGCCTCACGCGCAGCCGCCG-GCCGTGCCCCGTGCCGACTACTCGCT
CGCTCGCTCGCTTCCACCAGAAATCCCCCAACCCGCGGCTGACTCACTCCCGTCTCCCCCCGGATCCCGATCTGCGCTGC
CGGCTGGCTTGGCTGGG--------CGGGGGCGATGGAGGAAGGGCGCGAGGGATGGCCGAGCGCGGCGGCCGCGGCGGG
GGA---GGCGGTGGGGGTGGAGGAGGGGGAGGAGG---ACCAGTTCGACCGCCTGCCCGACGCGGTGCTCCTGGACGTAT
TCAACCGCATCGGCGACGTCAAGGCGCTCGGCCGCTGCGCGCTCGTCTCGCGCCGCTTCCACGACCTCGTCCCGCTCGTT
GACTCCGTCTTCGTCCGCGTCGACTGCGTCATTCCCGACGAGCCGGCCCCCTCCTCGGCCGGCTCCCCGCAGGCCGCCGC
CCCGTCTAGGGGCCGGGGCGCGC------------------------TCGCCCACATCGCGCGCCTCGTGCTCGGCGGCA
TCGTCAGGCCCATCCAGGCGCTCGGCCAGATCCTCTCCCCCACCCTGGCCATCGT-------------------------
-----CTCCCGCCGCTCCGTGGCCCCTCCGCCCG---CCTCGCCGCCTCCGCCCGCCGGGGACATCTCCCACCACTCGCC
CTCCGAGGTCCTCCGCTCCTTCAAGGAGCTACGCAGCCTCCGCATCGAGCTGCCCACCGGCGAGCTCGGCATTGACGACG
GCGTGCTCCTCAAGTGGAAGGCCGACTTTGGGTCCACCCTCGGCAGCTGCGTTATCCTCGGCGCATCCTCTGTGTCGTCC
AAGCCGCTGCAGCCACCAATGTCGTCCCCTGATGCCGCAGACAGCGAGGGTACTTCTCTCGATGACAACAGG--------
----GAGCCTGAAGAATTGGCGAGCATCCCCGAGTCGCTTCATACGAATGGGGGCCTTAAGCTCCGCGTCGTCTGGACCA
TCAGCTCGCTGATTGCTGCATCGGCTCGGCATTACTTGCTGCAGCCAATCATCGCCGATCATGAAATGCTTGATAGCTTG
AACCTAACGGATGCTGACGGGCAGGGTGTGCTCACTATGGACAAGAGTCAGCTACAGGAGCTGCGAGTGCGGCCTGTGTC
GGTTTCTGGCAACTCACACCGCACGCTCATGCCAGCGCTCATTATGAGACTTTGGTATGCTCCGCATATTGAACTTCCCG
GGGGAGTACTGCTGAAGGGCGCCACGCTGGTGGCGATCAGACCAAGTGACGATGTGCTGAGGGAGGGGGGAGGGGTTGAG
GCTGCTGGTCCGGCAGGAGCTAGCTGGATCTCAGATGCCTTTGAGGAGCCATATCGAACAGCGGCAAAGGTGCTTTTCAA
GCGGCGGACATACAGCCTTGAAATGAACTCGTTCTGAGCTTCACAGAGGTTAACTTTCTAGGAGGTAATTTATCACTTCA
CATGATTATTGCACATCATTACTGTCAAATATTGATA-----------------GTAGCATTGCAGTATCCGGAAGGAAT
CAATGCAGTTTCCTTAAGTGGAACTACCTTTTTTTTTTCTTGCCAAAATCGAAGTGCATAGAGTGAAACCTAGATTCGCG
CATATTTTATCATTATCTCTAAAGTTTGCCACCTATGCCCGGAAGCGTATATGCTGTTCTGGATTTATTCAATAATAAAG
GATTGGGGTGTATATAAGCAAAATTATTGATTTTTGGCTCATTGGTTTTCTTCTTGTTCGTGAGCGTTATGAAACACGTG
GCAAGGTTTTCTATGCCTCTCCAGTTCTAATGGGTCCCAATTCTGAAGGCTCGGTAGTGAGTTATTGAATCTAACACTGG
CAAATTTTGTATCATTCTTATTGTTATTAATATTACTAATGCCCAATTTGTAGTTTTGTACTAAGTATTACAACTGGCAC
CAATGTTTTGCTTCTCCACAGTTTGGAAGGTTCCAAGTGCCTGATTGACATAACCATAACTATGGGTATTATGCAAACAT
AACTTGCTTTATGGTGAGCATAACTTGATATGCTTAGTTTGTTCTCCTTAATCAACAGAGAGTAATGGTAATGGGCAC-G
GTCACAGACTCATGGTTTGGGTGATCAGGGTTTCCGGGTGCATATGTTTTGCATACGTATTTTGGTTAGTGTACTAACAG
GAAAGGATTTAATGTTTATATAATATTTATTTTTACTGCCATTCTGTTGGTTTGCTGGACCATGCACTGATATGGCTCAT
TTGCGACTTTTGGCATGGTAAAGGCACAATATATGAGTTCTTTTCTAAGT-CAAGGTTGTTGAATTGGTCTTACTACAGC
TATTCGGATGT--CTGTTTTAGTTCCTTTCTGTTCCTGCTGGCATGTTTGCTGCGATGCAATTTCTCGGGTATTAGGCAG
GTGGTTACTGGGAATCAACAATCTTTTATGGTTTTTGGAGGTCATGTTATGATTAGATAGGAGAGAAAATAATGCTCGCG
CAGTCTTGTCATCTTTACGGGACTTTTGGTTCCCAGCCGATGTTTGCCACTCCTAACTTTA
>chr3A_1
CACTCAAGCTCAAACTACCGCACTTGATTAGCGTATGGAATAAAATCCACCCCGCTGCCTCGCTTGACGCGGAAGCTTCC
GTCGATCTCCCCGTACGACCGACCAGGCACGCCAGCTAGCGACGCAGGC---------------CACGTTGCCTGCCGCC
CCGCCCTGCAGCGGGGA--------------CGAAGCGGCGGCGTCAGTTCCGCGGCCAGATTCCTCGCGTGCCCGCTGC
CGCAGCCTGGCTCCCACCACTCGCACAGCGCATC-TGTCAGCAAGCTCCTCGATCCATATATCGAGCTGTTTCTTCTGAC
AACACCCCCGCTTCTTCGCTTTGTTTAATCGT------------AGGTCGCCGCTAAGATCCCGTTCCCATCGATCGCCC
CAAAACACCTGAGAGGCTGAGAATGAGTTAGGAAGCCATTTACGTCCGCACGTACGGTCGATCTGATCCGTTGTTGGCGT
CAGGAGGATCGGACGGCTCCGGAGGCGCCTGGGACGGGCCATCGGTCCCGGTCTCCATCAGCTGGCTGCGGTGCGGGGTT
GTTCCTTGCACGGCACCGCGGGCGGCACGACGACGCGAGGTCAACAACCATGGAAACGTCATGATCCCATCCC-------
-------CATTGGCATTGGGCTGCCGTCGCCTCGGCCGGAGCGGTCGCCGTCGGAATTTTGGGCCGAGAGCGACGGGTTC
GGCCACCATCTATCTA---------TCTCCAAGGTCAGTCAGGC--------AG---------GCGAGTCCACACGCCCG
CACCACAAAGACACCACGGTGG-------------GGGGTGGGGTGGTGGGGTGATCCC--------CATTACCTCCGCG
ATCAGCGGTCGAGCCCGACACGTGACGCGTCGTCGCCCGCACCCACCACCCAAGGGCCAAGGAGAGGGGGGTACCCATTA
CCCAACCCAAAACCAAGACCAAGCGCCCGACCTCGCCTCACGCGCAGCCGCCGTGCCGTGCCCCGTGCCGACTACTCGCT
CGCTCGCTCGCTTCCACCAGAAATCCCCCAACCCGCGGCTGACTCACTCCCGTCCCTCCCCGGATCCCGATCTGCGCCGC
CGGCTGGCTCGGCCGGGCGTCTCCGCGGGGGCCATGGAGGAAGGGCGCGAGGGATGGCCGTGCGCG------GCGGCGGG
GAA---GGCGGTGGCGGCGGAGGAGGGGGAGGAGGAGGACCAGTTCGACCGGCTGCCCGACGCGGTGCTCCTGGACGTCT
TCAACCGCATCGGCGACGTCAAGGCGCTCGGCCGCTGCGCGCTCGTCTCGCGCCGCTTCCACGGCCTCGTCCCGCTCGTT
GACTCCGTCTTCGTCCGCGTCGACTGCGTCATTCCCGACGAGCCGGCCCCCTCCTCGGCCGGCTCCCCGCAGGCCGCCGC
GCCGTCGCGGGGCCGGGGCGCGC------------------------TCGCCCACATCGCGCGCCTCGTGCTCGGCGGCA
TCGTCAGGCCCATCCAGGCGCTGGGCCAGATCCTCTCCCCCACCCTGGCCATCGT-------------------------
-----CTCACGGCGCTCCGTGGCCCTGCCGCCCG---CCTCGCCGCCTCCGCCCGCCGGGGACGTCTCCCACCACTCGCC
CTCCGAGGTCCTCCGCTCCTTCAAGGAGCTCCGCAGCCTCCGCATCGAGCTGCCCACCGGAGAGCTCGGCATTGACGACG
GCGTGCTCCTCAAGTGGAAGGCCGACTTTGGGTCCACCCTCGGCAGCTGTGTTATCCTCGGCGCGTCCTCTGTATCGTCA
AAACCGCTGCAATCACCAATGTCGTCCCCTAATGCCGAGGACAGCGAGGCTACATCTCTGGATGACAACAGG--------
----GAGCCTGAAGAACTGGCGAGCATCCCTGAGTCGCTTCATACGAATGGGGGCCTTAAGCTCCGCGTCGTCTGGACCA
TCAGCTCGCTCATTGCTGCATCGGCTCGGCATTACTTGCTGCAGCCAATCATTGCCGATCATGAAATGCTTGATAGCTTG
AACCTCACGGATGCTGACGGGCAGGGTGTGCTCACTATGGACAAGAAGCAGTTACAGGAGCTGCGAGTGCGGCCTGTGTC
GGTTTCTGGCAATTCACACCGCACGCTCATGCCAGCGCTCATTATGAGGCTTTGGTATGCCCCGCATATTGAACTTCCCG
GGGGAGTACTGCTGAAGGGCGCCACGCTGGTGGCGATCAGACCAAGTGACGATGTGCTGAGGGAGGGAGGAGGGGTTGAG
GCTGCTGGTCCGGCAGGAGCTAGCTGGATCTCAGATGCCTTTGAGGAGCCATATCGAACAGCGGCAAAGGTGCTTTTCAA
GCGGCGGACATACAGCCTTGAAATGAACTCATTCTGAGCTTCA--GAGTTTAACTTTCTAGGAGGTAATTTATCACTTCA
CATGATTATTGCACATCATTACTGCCAAACTATTTAGATCATCGCTGATGTCCTGTAGCATTGCAGTATCTGGAAGGAAT
CAATGCAGTTTCCTTAAGTGGAACTACCTTT--TTTTTCTTGCCAAAATCGAAGTGCATAGAGTGAAACCTAGATTCGCG
CATATTTTATCATTATCTCTAAAGTTCGCCACCTATGTCCGGAAGCGTATATGCTGTTCTGGATTTATTCAATAATAAAG
GATTGGGGTGTATATAAGCAAAATTATTGATTTTTGGCTCATTGACTTTCTTCTCGTTCGTGAGAGTTATGAAACACGTG
GCAAGGTTTTCCATGC--CTCCAGTTCTAATGGGTCCCAATTCTGAAGGCTTGGCAGTGAGTTATTGAATCTAACACCGG
CAAATTTTGTATCATTCTTATTGTTATTAATATTACTAATGCCCAATTTGTAGTTTTGTACTAAGTATTACAACTGGCAC
CAATGTTTTGCTTCTCCACAGTTTGGAAGGTTCTAAGAGCCTGATTGACATAACCATAACTATGGGTATTATGCAAACAT
AACTTGCTTTATGGTGAGCATAACTTGATATGCTTAGTTTGTTCTCCTTAATCAACAGAGAGTAATGGTAATGGCCACAG
TTCACAGATTCATGGTTTGGGTGATAAGGGTTTTTGGGTGCATATGTTTTGCATACGTATTTAGGTTAGTGTACTAACAG
GTAAGGATTTAACATTTATATGATATTTAC-TTTACTGCCATTGTGTTTGTTTGCTGGACCATGCACTGATATGGCTCAT
GTGCCACTTTTGGCATGGTAAAGGCACACTATATGACTTCTTTTCAAAGTCCAGGGTTGTTGAATTGGTCTCACTACAGC
TATTCGGATGTGTCTGTTTTAGTTCCTTTCTGTTCCTGCTGGCATGTTAGCTGTGATGCAATTTCTTGAGTATTAGGCAG
GTGGTTACTGGGAATCAATAATCTTTTATGGTTTTTGGAGGTCGTGTTATGATTAGATAGGACAGAAAATAATTCTCGCG
CAGTCTTGTCACCTTTACGGGACTTTTGGTTCCCAGCTGATGTTTGCCACTCCTAACTTTA
>chr1D_1106
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-------------------------------GACG---ACCGCTTCGACGGCCTCCCCGACCCGCTGCTCCTCCTCATCT
TCAACCGCATCGGCGACGTCAAGGCGCTCGGCCGCTGCGCGCTCGTCTCCCGCCGCTTCCACGCCCTCGTGCCCCTCGTC
GACTCCGTGCTCGTCCGCGTCGACTGCGTCATCCCCGACGACCCCGCCTCCTCCGCCTCGGGCTCCCCGTCCTCCTCCGC
GCCCTCCTCCCCCACCGCCTCCGCCTCCGCCCGCGCGCGCGGCGTCTTCTCCCAGATCGCGCGCATGCTCATCGGCGGCA
TCGTCAAGCCCATCCAGGCGCTCGGCCAGATCCTCTCCCACGCCGGCTCCGCCTCCGACTTCCCGGCCTCCGCCTCCCTC
TCCTCCTTCCGCCGCTCCGCCGCCTCCTCGCTCTCGTCCTCGGCGTCGGCGCCCCCCGGCGACGTCTCGCACCACTCGCC
CTCCGAGGTGCTCCGCTCCTTCAAGGAGCTCCGCAGCCTGCGCATCGAGCTCCCCGCCGGCGAGCTCGGCATGGACGACG
GCGTGCTGCTCAAGTGGAAGGCCGACTTCGGCTCCACGCTCGGCAGCTGCGTCATCCTCGGCGCCGCCTCCGCCTCCGCC
TC------------------GCCCTCCTCTGCCGCCAAGGACGGCGCCACTGCCGCACCTCCTCCTGCGACCGCTGATTG
TGCCGAGTCTGACGATTCAGGGAGCATACCGGAGTCCTTCTACACCAACGGGGGGCTTAAGCTGCGGGTGCTATGGACCA
TCAGCTCGCTGATTGCGGCGTCGGCCCGGCATTACCTGCTGCAGCCCATCATTTCCGACCACGCGTTGCTGGAGAGCCTG
GATCTGACGGACGCCGATGGGCAGGGCGTGCTCACCATGGACAAGTGGCAACTGCAGGAGCTACGGGTCAGGCCAGTATC
AGCGTCTGGTGACTCGCACCGCACGCTCATGCCGGCCCTTAGCATGCGGTTGTGGTATGCGCCACACATTGAGCTGCCTG
GGGGCACGGTCTTGAATGGAGCAACACTGGTGGCCATCAAGCCGAGCGAAGAGGCAATGATGGATGCAGTTGGGAATGCA
ACTGCTGGGTCAGCAGGTGGATCCTGGGTTTCAGATGCTTTTGAGGAGCCATATCGGACGGCCGTCGGTGTGCTTCTCAA
GCGGAGGATGTATAGCCTTGAGATGAACTCATTCTAAGCT----------------------------------------
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>SNPs
---------S----------------------------------------S-----------------------------
----------------S--------------------------S------------------------------------
--------------------------------------------------------------------------------
---------------S------------------S--------------------------------------S------
--SS------------------------------------S--------S-----S------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S--------------------S--------------------S--SSSSSSSSSSS-----------------
----------------------------------------------------------SSSSSSSSS-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------SSS---------------------------------------------------------S-S
--SSSS--S--S--S-----------------------------------------------------------------
----------------------------S---------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
----------S----S----------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
---------------------------S-------------SS-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S-S-----S--------------S---------S---------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
-S--------------------------S---------------------------------------------------
---------SS--------------------------------S-------------------------------S----
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------S-----
------S-------------------------------------------------------------------------
------------------------------------------------------------------S-------------
-S-----------------------------------------------------------
>forward_97
-----------------------------------------------------------------------------TCC
ATCGATCTCCCCGTACC---------------------------------------------------------------
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>reverse_1856
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---------------ACAATGTCGTCCCCTGATGC---------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------
>forward_474
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-------------------------------------------------------GGTCGATCTGATCCGTCCG------
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>reverse_1966
--------------------------------------------------------------------------------
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---------------------------------------------TAATGGGGGCCTTAAGCTCC---------------
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-------------------------------------------------------------
>forward_859
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-----------------------------------------GGGTGGTGGGGTGATCCA---------------------
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>reverse_2522
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-----------------------------------------GTGCTGATGTCCTGTAGCAT-------------------
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-------------------------------------------------------------
>forward_1966
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--------------------------TCCCTGAGTCGCTTCATACT----------------------------------
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>reverse_3131
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----------AATGGTTTGGGTGATCAGGGT-------------------------------------------------
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-------------------------------------------------------------
