>input_sequence_53043
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--------------------------------------------------------------ATGATGCTGCCCGATGAT
CTTCTCGAGGAGATCTTCCTCCGCCTCCCGCCGGGCGAGCCCGCGTGCCTCGTGCGCGCCTACCTTGCCAGCAAGTTCTG
GCTCGGCCTCCTATCCGGCGCTCGATTCCACAGCCGCTACCGGGAGTTTCATGGTGCTCCCCCCATGCTGGGCTTCGTTT
ATGCCTTGTCCTCG---TACACCCAGACGAAGGTGGACAAACCCATCCCACGCTTTGTCTCCACCACGGAATTCGCCGCC
CGCGTTCCCGATGACGACTTGGCCATGGCCGCGTTGACCACGG---------ACTATA---------------TTGCATT
GGACTGCCACCATGGCCGCGTTCTACTCGGCGATC---GTAAA---CACAA---TCCGCTTGTCGTTTGGGACCCCATGG
CAGGCTGCCTGACGAAGATGCAAGCACTCAAAGGACAAA-GCAGAACCA--------------GTGCGGCCGCGGTGCTC
TGTGCCGTGACCGGCTGTGACCATTGCGCCTGTCACCACGGCCCATTCCAGGTTTTCTTCTTCGGCATGAGC--------
-GTTCATGGTGCTCATTGTGTTATACACCTCTCTGTGTTCTCGTCGGAGACACTTGGCTGGAGCGAGCCCCAGACATGCC
TTGGTCTTGATCTTGACGATGCTGCATTCATCAAGCCAGCGCCCTCTGTCGCCATCCAAGGCGCACTTTACTTCATGCAA
GGGAGTTTTGAAGATGATCACA------TAACAGGATTTCTGAAGTACGGCTTGGGCTCTAATTGCTTATCGCTGATTGA
TGCGCCGCCGATGAGGGGATCTCTCATTATTGG---TGCCAATACTCTCATGGCTATGGAGGACGACAGTTTGGGTTTTG
CACAAGTGAAAAGGTTAACCATCTACCTGTGGTCAAGGCATATGGGTTCCGATGGAGTTGCATCATGGACTCAGCCTAGA
ATCATTGATCTCAAGAACCTTCTACCCATTCAGAATCCTAGTGGAAGAATTAAACTGATTGGATCTCTGGAGGGTAGTGA
TATCATTTTCGTGACCACAGACCTTGGCATCTATGAGCTTAATCTAAAGTCGCTACACTGGAAGAAGCTATGGGGAAAGA
AAGATGTTTGGTGTTTGTTTCCGTGCATGAGTTTCCCCAGTCCACAAGGTATATCTA-TATGTCCTTTCTTTTATCATAT
GG---GGACAAGTCTTAAGTAATAAT-ATATC-------AGTTAGCCAAACAAACAAAATA-TAGAATGTTTAAGGAGAC
T---GAAAATTTTACTTGATGTT-CAATTTGTTATAATATATGTGCTCATGCAAACTTTCAAATGTT-------------
----------CACCTAATTTGCAA-TCTATATAGTATCGTGTCTTTTACTTTCTGAAATTACACTGACAAATCTACGTTT
GCAGAAAGGATGATTTCTTGTGATGCGGCTCATTGA--------------------------------------------
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>chr5B_1_TraesCS5B01G553700
GCATATACTAGAAGACTGCAATGACCATGTAGTGAGACGAAGATGTTCATATATTTGGTCAGAGTGATAATTGCAACTGC
TTTTACATTCACAGATTTTCCTTAGATAAGATCTTTTGCTCAAATCATGAGCACGCATTTTAGCCAGGAACTGTACAATT
TTCCCTCACTTTGGTCCAATGGCTGAATACTCCTCTGAGAGATGGTGCAAATGGTGATGAGGGCATATCCAGACTTGCTG
TTTTCTTCCGCCCACGAGATGACGATATGGCTTCTGAATGCTAGCTGACATACAAATCTGAAATTAACCTCGTGAATGGA
AATACTACTACATGTCAAGTGCTGCTGGTACTGTAGTAAATTATTAAAGCATTTTAGTAAGCAGCGTTTCCATTTGTGGA
AGAGGTATTGCTCTGCTTGGTGCCTGATAGCTAATTCACCTTGGTCATCCTTCATGGTCGAAACAAATTGCGTTTCGAGG
TGGCTGATTTTTTGCATGTCATGCAACTAGCTTGGATTTACATGACTTGCCTGTCCATCTTTCATATTTTCTTAACGTGT
GGGTAATTTTTTCATACATATGGATCTTACTAGTCCATATTGTTGGAGATTTGTTTTGTTATATGCTGGCTGAGCACGGG
TTGATTGACCATGTGGTTGTGCTTGGTTTGTGATGCTGTTTTCGGATTTCATCGTTAAGAATTCTTGACTATTGCCTGGG
AAATTC--TTGTTGGACTTAAACACGACATAACCTCCTGTACGTGTACATATAGGTTTCTTGTTCATGCATG-TACCGTG
TAGGACTAGGATTAGCAAAACCCGAGTAGTACTATATATATA--------------------------------------
-----------------TGCGTGTACCATCGTGGGTTTGTGAAGTAATAATAATACAAATA-------------------
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--------AAAAAACAGGCTCGATATACGAGCTATAGTTGAATCAATCAGCAGGTGCAGCTCGCTAC-------------
----GTACGTATCAATCACAAGGGAGGGGCCAAAACCAAAACCCTCGTCTCCACCACCGACCATGATGCTGCCCGATGAT
CTTCTCGAGGAGATCTTCCTCCGCCTCCCGCCGGGCGAGCCCGCGTGCCTCGTGCGCGCCTACCTTGCCAGCAAGTTCTG
GCTCGGCCTCCTATCCGGCGCTCGATTCCACAGCCGCTACCGGGAGTTTCATGGTGCTCCCCCCATGCTGGGCTTCGTTT
ATGCCTTGTCCTCG---TACACCCAGACGAAGGTGGACAAACCCATCCCACGCTTTGTCTCCACCACGGAATTCGCCGCC
CGCGTTCCCGATGACGACTTGGCCATGGCCGCGTTGACCACGG---------ACTATA---------------TTGCATT
GGACTGCCACCATGGCCGCGTTCTACTCGGCGATC---GTAAA---CACAA---TCCGCTTGTCGTTTGGGACCCCATGG
CAGGCTGCCTGACGAAGATGCAAGCACTCAAAGGACAAA-GCAGAACCA--------------GTGCGGCCGCGGTGCTC
TGTGCCGTGACCGGCTGTGACCATTGCGCCTGTCACCACGGCCCATTCCAGGTTTTCTTCTTCGGCATGAGC--------
-GTTCATGGTGCTCATTGTGTTATACACCTCTCTGTGTTCTCGTCGGAGACACTTGGCTGGAGCGAGCCCCAGACATGCC
TTGGTCTTGATCTTGACGATGCTGCATTCATCAAGCCAGCGCCCTCTGTCGCCATCCAAGGCGCACTTTACTTCATGCAA
GGGAGTTTTGAAGATGATCACA------TAACAGGATTTCTGAAGTACGGCTTGGGCTCTAATTGCTTATCGCTGATTGA
TGCGCCGCCGATGAGGGGATCTCTCATTATTGG---TGCCAATACTCTCATGGCTATGGAGGACGACAGTTTGGGTTTTG
CACAAGTGAAAAGGTTAACCATCTACCTGTGGTCAAGGCATATGGGTTCCGATGGAGTTGCATCATGGACTCAGCCTAGA
ATCATTGATCTCAAGAACCTTCTACCCATTCAGAATCCTAGTGGAAGAATTAAACTGATTGGATCTCTGGAGGGTAGTGA
TATCATTTTCGTGACCACAGACCTTGGCATCTATGAGCTTAATCTAAAGTCGCTACACTGGAAGAAGCTATGGGGAAAGA
AAGATGTTTGGTGTTTGTTTCCGTGCATGAGTTTCCCCAGTCCACAAGGTATATCTA-TATGTCCTTTCTTTTATCATAT
GG---GGACAAGTCTTAAGTAATAAT-ATATC-------AGTTAGCCAAACAAACAAAATA-TAGAATGTTTAAGGAGAC
T---GAAAATTTTACTTGATGTT-CAATTTGTTATAATATATGTGCTCATGCAAACTTTCAAATGTT-------------
----------CACCTAATTTGCAA-TCTATATAGTATCGTGTCTTTTACTTTCTGAAATTACACTGACAAATCTACGTTT
GCAGAAAGGATGATTTCTTGTGATGCGGCTCATTGACGTTGTACGGTTGAATATGA---AGGGCAGGAGGCCATTGTCAT
CAAACAGAAAAGATGACTACTAGGAGGCGAG------A-TGGTCTTGTGATGAA-TTATAAAGTATCTAGTAGCTGGTTT
GGTGC----AATGGTGCTTGTATTCTCTTAGTGCTGGTAGCCTTTGTCAGTAATCTTAATAACATAAGTGGGTGAAT---
----------------GGATCGGATTATATTTGTTTTGAACCTCTAATTTCTTGCGGCATCAGCTATGTGCTCTGTTGTT
TAATTTGCTTGAAC-TGCAGCTCTAGACAATATCTTA----GTGTTCCCATTTTTAAAGCTCTAAAATTTGTCGTCCAAG
CTTTGA-CCCAACTCTAT--------ATTCACCTCCAGAAAGGGGTACAACTGTTGAGCAGATGTTCAGGGGATTACTAG
AGCTAGCGGTTTTTGTAATCTGATTATAAACCTGAGCTCAATTAACTTTTCCATAATACCATTGGAAGATGGAGGTGACG
GCCCTTGCAGCTTGCGGTGTTCACTGGGAGTGTTCTAGACCAGTGTGGGACCCAATTTAGATAGTGGCTCAAATGGGACA
CCCGCCTTTAGATGTTAGGCTTTGGTGCGATGTCTATTTGATATTAGGCCCGGACATTCGGCACACCTTCATCAAGGAGA
TAGGAGTAGCAACAACATTGCCAAGATGGTGCCTTCAGGCTTATTGATATATCAACTTGTATGGTCTTTGTGAATAATTA
ATAATATGACTGCATGCATCGTCCAGATGCAGAGATCGGGGCTACATCCTCCTTTTAAAAAAAGGCATGTCTATGCCTTG
CATCCATAGCAGTATGTCCTTGTCAGT---TTGGGGAACCTTTCTAGAAGAACGTATAACGTTATAGCTCAATTATAATC
CACTAGGTAGGAATTCACAGCCCGGGGAGAGACTACTTGTGTTTCACTGTTAAGTTGGTATTCGGTTTGTCATTTTTCAC
TCTTGATAGATAAATAGTACTTGTTGCCAAGATTATGTATTGCAAAT
>chr5B_1
GCATATACTAGAAGACTGCAATGGCTATGTAGTGAGACGAAGATGTTCATATATTTGGTCAGAGTGATAATTGCAACTGC
TTTGACATTCACAGTTTTTCCATAGATAATATCTTTTGCTCAAATCATGAACACGCATTTTAGCCATCAACTGTACAATT
TTCCCTCACTTTGGTCCAGTGGCTGAATACTCATCTGACAGATGGTGCAAATGGTGATGAGGGCATATCCAGACTTGCTG
TTTTCTTCGGCCCACGAGATGACG--ATGGCTTCTGAATGCTAGCTGACATACAAATCTGAAATTAACCTCGTGATTGGA
AATACTACTACATGTCAAGTGCTGTTGGTACGGTAGTAAATTATTAAAGCATTTTAGTAAGCAGCGTTTCCATTTGTGGA
AGAGGTATTGCTCTGTTGA-TGCCTGATAGCTAATTCACCTTGGTCATCCTTCATGGTCGAAACAAATTGCGTTTCGAGG
TGGCTGATTTTTTGCATGTCACGTAACTAGCTTGGATTTACATGACTTGCCTGTCCATCTTTCATATTCTCTTAACGTGT
GGGTAATTTTTTCATACATATGGGTCTTACTAGTCCATATTGCTGGAGATTTATTTTG----------------------
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>chr5B_654
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-------------TGGTTGTGCTTGGTCTGTGATGCTGTTTTCGGATTTCATCGTTAAGGATTCTAGACTATTGCTTGGA
AATTCACGTTGTTGGACTTAAACACGACATAACCTTCAGTACATGTGCATATAGGTTTCTTGTTTATGCATTATACCGTG
TAGGACTAGGATTCGCAAACCCTGACAGCTTTGGGTGTGGGCGAGGAGACAGGCGTGTGGGCGAAGTGATAAACACCCAT
ACACCAGTCCCTTTGCGTGCGTGAAAACTCGTGTGTGGGTGAATTGCTAAACGCCCACACACCAGCCCCCGTGTGGTGAA
AAAGGACGTGTGGGCGACCGGATGAATGCCCGTACACCAACCCAGTCCTACGTGGCAGACAAAAATTGCTAAAACACGCC
AAGATTCGTGCATAATTTATTGGACGAGGATCCATGCGTGTAGGCGAGTTGCTAGATGCCCACACGTGTGGACGTTAGTA
TTTCCGATAAAAAACAGGCTCGATATACGAGCTA--GTTGAATCAATCAGCAGGTGCAGCTTGCTATATACGTTGCTACG
TAGAGTACGTATCAATCACAAGGGAGGGGCCAAAACCAAAACCCTCGTCTTCACCACCGACCATGATGCTGCCCGATGAG
CTCCTCGAGGAGATCTTCCTCCGCCTCTCGCCGGGCGAGCCCGCATGCCTCGTGCGCGCCTACCTTGCCAGCAAGTTCTG
GCTCGGCCTCCTATCCGGCGCTCGATTCCACAGCCGCTACCGTGAGTTTCATGGTGCTCCCCCCATGCTGGGCTTCGTTT
ATGCCTTGTCCTCG---TACACCCAGACGAAGGTGGACAAACCCATCCCACGCTTTGTCTCCACCACGGAATTCGCCGCC
CGCGTTCCCGATGACGACTTGGCCATGGCCGCGTTGACCACGG---------ACTATA---------------TTGCATT
GGACTGCCACCATGGCCGCGTTCTACTCGGCGATC---GTAAA---CACAA---TCCGCTTGTCGTTTGGGACCCCATGG
CAGGCTGCCTGACGAAGATGCAAGCACCCAAAGGACAAAAGCAGAACCA--------------GTGCGGCCGCGATGCTC
TGTGCTGTGACCGGCTGTGACCATTGCACCTGTCACCATGGCTCATTCTAGGTTTTCTTATTCGCCATGAGC--------
-GTTCATG-----------GTTATACAACTTTCTGTGTTCTCGTCGGAAACACTTGGCTAGAGCGAGCCCCAACCATGTC
CTGGTCTTGATCTTGACAATGCTGCATTGATCAAGCAAGCGCCCTCTGTCGCCATCCAAGGCGCACTTTACTTCATGCAA
GGGAGCTTGGCAGATGATCACA------TAACAGGATTTCTGAAATACGATTTGGGCTCTAATTGCTTATCGTTGATTGA
TGCGCCGCCGATGAGGGGATCTCTCATTATTGG---TGCCAACAGTCTCATGGCTATGGAGGGCGACCGTTTGGGTTTTG
CACAAGTGAAAAGGTTAACCATCTACGTGTGGTCAAGGCATATGGGTTCCGATGGAGTTGCGTCATGGACTCAGCCTAGA
ATCATTGATCTCAAGAACCTTCTACCCATTCAGAATCCTAGTGGAAGAATTAAACTGATTGGATCTTTGGAGGGTACTGG
GATCATTTTCGTGACCCCAGACCTTGGCATCTATGAGCTTAATCTAAAGTCGCTACACTAGAAGAAGCTATGGGGAAAGA
AAGATGTTTCGTGTTTGTTTCCGTAAATGAGTTTCCCCAGTCCACAAGGTATATCTA-TATGTCCTTTCTTTTGTGATAT
GG---GGACAAGTCTTACGTAATAAT-A-------------CTAGCCAAACAAACAAAATA-TAGAGTGTTTAATGAGAG
T---GAAAGTTTTACTTGATGTCTCAATTTGTGATAATAAAGGTGCTCATGAAAACTTTCAAATGTT-------------
----------CACCTAATTGGCGA-TTTACATAGTATCGTGTCTTTTACTTTCTGGAATCACACTGACAAATCTACGTTT
GCAGAAAGGATGATTTCTTGTGATGCGGCCCATTGATGATGTAGGGTTGAATATGCCTAAGGGCAGGAGGCCACTGTCAT
CAAATAGGAAAGATGGCCACTAGGAGGAGAG------A-GGGTCTTGTGACGAATT-ATGTAGTATCTAGTAGCCGGTTT
GGTGC----AATGGTGCTTGTTTTCCCTTAGTGTTGGTAGCCTTTGTCAATCATCTTAATAACATAAGCGGGTTAAT---
----------------CGATTGGATTATATTTGTGATGAACCTCTAATTTCTTGCAGCATCAGATATGTGCTCTGTTGTT
TAAC------GAAA-TGCAGTTGTAGACAATTTCTTA----TTGTTCCCATTTTTAAA-CTCTACAATTTGCCCTCCAAG
CTTTGA-CC-AACTCTAT--------ATTCATCTCCAAAAAGGGGTACAACTGTTCAGCAGATGCCGAGGGCATTACTAG
AGCTAGCGGTTTTTGTAATCTGATTATAAACCTGGGCTCAATTAACTTTTCCATAATACCATTGGAAGATGGAGGTGGCG
GCCCTTGCAGGATGCGGTGCTCACTGGGAGTGTGCCAGACT-GTGTGGGACCCAATCCAGATAGTCGCTCGGATGGGACA
CCCGGCTTTAGATGTTAGGCTTTGGTGCGATGTCTGTTTGGTATTAGGCTCGGACATTCGGCACACCTTCATCAAGGGGA
TAGGAGTAGCAACATCGTTACCAAGATGGTGGCTTCAGGCTTATTGATATATCAACTTGTATGGTCTTTGTGAATAATTA
ATAATATGATTGCATGC---------------------------------------------------------------
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>chr5B_1006
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-------------------------------------------------------------------GCTGCCGGACGAG
CTCATCGAGGAGGTCTTCTTCCGCCTCCCGCCGGACGAGCCCGAGCACCTCGTGCGCGCCTCCCTCGCCTGCAAGCTCCT
GCTGGGCCTCCTCACCGGACCTAGCTTCCGCCGTCGCTACCGCGACTTCCATGGAGCTCCCCCCATGTTGGGTTTCCTTT
ATTCCTGGCCACAATTCTCCCGCCAACGGTCGGAGGACCTCCTCGTCCCACAGTTCTTCCCCACCACAAAATTCGGCGCG
CGTGTTCCAGACGATCCCTGGC------------------CGG---------ACTGGGGGGACTCCGAGTTGGCTGTGTT
GGACTGCCACCACGGTCGCGTTCTCCTCGGGGACTATGATAAA---CCCAT---GCCGCTCATCGTTTGGGACCCCATGA
CAGGCAGCCGGACCAAGCTGGAAGCGCCCAAAGGATGCAATATGCCCATGAACGCCGAGCCCGGTGGAGCCGCCGTGCTC
TGTGCCGTGGCAGGATGTGACCACCGCGGATGCCATCAAGGCCCCTTCCGGGTTGTCTTCTTCGGCATGAGCACGGA---
---TGGTGACGATAATTGTATTATACACGTGCGGGTGTCCTCGCCGGAGACTGGTGAGTGGAGCG------AGCAGTGCC
CTAGTTTTGATCTTGGCATGGATGCATTCATCTGGCCAGTGCCTCCTGTCCTCATCCAAGACGCACTTTACTTTATACAT
ATTCTTGGTGAAGATGAACGCA------AAGTAGGAATTCTCAAAAACGACGTGGACTCTAATTGCTTATCGCGGATTGA
TGCGCCAGGGCCACTGCCGTGGCCTCCCAGTGACGATTCTACTATCCTCATGGCTATGGAGGATGGCAGTTTGGGTTTTG
CACAAGTGGATAGCGTAACTTTCTATCTGTGGTCAAGCCAGATGGGCTCCGAGGGTGTTGCGTCATGGACTCGGCCTAGA
GTCATCGATCTCAACAACCTTCTCCCCATCAAAAATCCTGATAAAGTTCTTAGACTGATTGGATCTGTGGAGGGCAGGGA
TATCGTTTTCATCACCACAGACCTTGGCATCTACGAGATTAATCTTAAGTCGCTACAGTGGAAGAAGCTATGGAAGAGAA
AAAATTTCCTTAGATTGATTCCGTACATGAGTTTCCACAATCCACAAGGTATATCTA-TATGTCCTTTCTTTTGTTATTT
----------ACTCTTAAGTAATAAT-ATAGTACGTATTAGTTAGCCAAACAAACAAAATAATTGAATGGTTAATTAGAC
T---GAAAGTTATATTTGATGTTTCATTTTGTGATAATATATCTGCTAGAGCAAACTTTCACTGATATCATGTACTACAA
TCGAATGTTATACCTTATTGGCAG-----TATAGTATCGTGTCTTCT-CCTTTTGGAATCACGCCGACAAATCTATGTTT
GCAGAAAGGGTGATCCCTTGTGATGCGGCTCATTGACGACGTAGGGTTGAATATGACTAAGGGCAGGAGGCCACAGTCAT
CAA-GAGGAAAGATGACCAGTTGGAGGCGAC------A-GGGTCTTGTGATGAA-T-ATGCAGTATCTGGCAGCTGGTTT
GCTGC----AATGGTGCTTGTTTTCTCATACTGTTGGTAGCTTTTGTCAGTTAGCTACAATTCCCCATGCGTTGTGGGT-
-----------------GAATGGATTGTTCTTGCACTGAACATCTAATTTCTTGCGGCCACAGTTCTGTGC---------
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>chr5B_1006
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-------------------------------------------------------------------GCTGCCGGACGAG
CTCATCGAGGAGGTCTTCTTCCGCCTCCCGCCGGACGAGCCCGAGCACCTCGTGCGCGCCTCCCTCGCCTGCAAGCTCCT
GCTGGGCCTCCTCACCGGACCTAGCTTCCGCCGTCGCTACCGCGATTTCCATGGAGCTCCCCCCATGTTGGGTTTCCTTT
ATTCCTGGCCACAATTCTCCCGCCAACGGTCCGAGGACCTCCTCGTCCCACAGTTCTTCCCCACCACAAAATTCGGCGCG
TGCATTCCGGACGACCCTTGGC------------------CGG---------ACTGGGGGGACTCTGAGTTGGCTGTGTT
GGACTGCCACCATGGTCGCGTTCTCCTTGGGGACTATGATAAA---CCCAT---GCCGCTCATCGTTTGGGATCCCATGA
CAGGCAGCCGGACCAAGCTGGAAGCGCCCAAAGGATGCAACATGCCCATGAACGCCGAGCCCGGTGGAGCCGCCGTGCTC
TGTGCCGTGGCAGGATGTGACCACCGCGGATGCCATCAAGGCCCCTTCCGGGTTGTCTTCTTCGGCATGAGCACGGA---
---TGGTGACGATAATTGTATTATACACGTGCGGGTGTCCTCGCCGGAGACTGGTGAGTGGAGCG------AGCAGTGCC
CTAGTTTTGATCTTGGCATTGGTTCATTCATGGTGCGAGTGCCCCCTGTCCTCATCCAAGACGCACTTTACTTTATACAT
AATATTGC------TGATCTCA------GAATAGGAATTCTCAAATACGACGTGGGCTCTAATTGCTTATCGCGGATTGA
TGCGCCA------CGGGCATGGGCTGTCAGTGACGATGCCATTATCCTCATGGCTATGAAGGATGACAGTTTAGGTTTTG
CACAAGTGAATAGGTTAACCCTCTACCTATGGTCAAGGAAGATGGGTTTTGATGGACTTGCTTCATGGACAAAGCGTAGA
GTCATCAATCTCAACAACCTTCTCCCCATCCAAAATCCTGATAAAAGACTTAGACTGTTTGGATCTGTGGAGGGCAGGGA
TATTGTTTTCGTGACCACAGACCTTGGTATCTATGAGATTGATCTTAAGTCGCTACAGTGGAAGAAGCTATGGAAGAGAG
AAAAATTCCTTAGATTGATTCCCTACATGAGTTTCCACAATCCACAAGGTATATCTA-TATGTCCTTTCTTTTGTTATTT
----------ACTCTTAAGTAATAAT-ATAGTACGTATTAGTTAGCCAAACAAACAAAATAATTGAATGGTTAATTAGAC
T---GAAAGTTATATTTGATGTTTCATTTTGTGATAGTATATCTGCTAGAGCAAACTTTCACTGATATCATGTACTACAA
TCGAATGGTATACCTTATTGGCAG-----TATAGTATCGTGTCTTCT-CCTTTTGGAATCACGCCAACAAATCTATGTTT
GCAGAAAGGGTGATCCCTTGTGATGCGGCTCATTGACGACGTATGGTTGAATATGACTAAGGGCAGGAGGCCACAGTCAT
CAA-GAGGAAAGATGACCAGTTGGAGGCGAC------A-GGGTCTTGTGATGAA-T-ATGCAGTATCTGGCAGCTGCTTT
GCTGC----AATGGTGCTTGTTTTCTCATACTGTTGGTAGCTTTTGTCAGT-----------------------------
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>chr5B_1006
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-------------------------------------------------------------------GCTGCCGGACGAG
CTCATCGAGGAGGTCTTCTTCCGCCTCCCGCCGGACGAGCCCGAGCACCACGTGCGCGCCTCCCTCGCCTGCAAGCTCTG
GCTCGGCCTCCTCACCGGACCTACCTTCCGTCGTCGCTACCGCGACTTCCATGGAGCTCCCCCCATGATGGGCTTCCTTT
ATTCCTGGCCACAATTCTCCCGCCAACGGTCTAAAGACCACCTTGTCCCACAGTTCTTCCCCACCACAAAATTCAGCGCG
CGCATGCCGGACGACCCCTGGC------------------CGG---------ACTGGGGGGAGTCCGAGTTGGTTGTGTT
GGACTGCCACCATGGTCGCGTTCTCCTTGGGGATTATGATAAA---CCCATGGCTCCGCTCATCGTTTGGGACCCCATGA
CAGGCTGCCGGACCAAGCTGGAAGCGCCCAAAGGATGCAATATGGCCTTGACCGCAGAGCCCGGTGGAGCCGCCGTGCTC
TGTGCCGTGGCCGGATGTGACCACCGCGCGTGCCATCAGGGCCCCTTCCGGGTTGTCTTCTTCGGCATGAGCACGGA---
---TGGTGACGATAATTGTATTATACACGTACGGGTGTCCTCGCCGGAGACGGGTGAGTGGAGCG------AGCCGTGCC
CTGGTCTTGATCTTGGCATTGATTCATACATGGTGCGAGTGCCCCCTGTCCTCATCCAAGACGCACTTTACTTTATGCAT
AATATTCC------TGATCTCA------GAATAGGAATTCTCAAATACGACGTGGGCTCTAATTGCTTATCGCGGATTGA
TGCGCCA------CGGGCATGCGCTGTCAGTGACGATGCCATTATCCTCATGGCTATGAAGGATGACAGTTTGGGTTTTG
CACAAGTGGATAGCTTAACCCTCTATCTGTGGTCAAGCCAGATGGGTTTTGATGGACTTGCTTCATGGACAAAGCGTAGA
GTCATCAATCTCAACAACCTTCTCCCCATCCAAAATCCTGATAAAAGCCTTAGACTGATTGGATCTGTGGAGGGCAGGGA
TATTGTTTTCGTGACCACAGACCTTGGCATCTATGAGCTTAATCTTAAGTCGCTACTGTGGAAGAAGCTATGGAGGAGAA
AAAAATTCTTTAGATTGATTCCGTACATGAGTTTCCACAATCCACAAGGTATATCTA-TATGTCCTTTCTTTTGTGATTT
GA----GACAACTTTTAAGTAATAAT-ATATTCAGT-TTTGCTAATCATACAAACACAATAATTGAATGGTTAATTAGAC
T---GAAATTGACATTTGATGTTTCGTTTTATGATATCATATCTGCTTGAGCAAACTTTTACTTCTACG------TACAA
TCAATTGTTATACCTTATTGACATTTTTATATAGTATCTTGTCTTCT-CCTTTTAGAGTCACACTGACAAATTTAAGTTT
GCAGAAAGTGTGATCCCTTGTGATGTGCCTCATTGATG-CGTAGGGTTGAATATGACTTAGGGCAGGAGGCTACAGTCAT
CAA-CAGGAAAGATGACCAGTTGGAGGCGAC------A-TGGTCTTGTGATGAA-G-ATGCAATATCTGGCAGTTGGTTT
GGTGCAATTAAAGGTGCTTGTTTTCTCATAGTCTTGGTAGCTTTTGTCAGTAAGCTT-----------------------
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>chr4A_1006
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-------------------------------------------------------------------GCTGCCGGACGAG
CTCCTCGAGGAGATCTTCCTCCGCCTCCCGCCGGACGAGCCCGCGCACCTCCTGCGCGCCTCCCTCGCCAGCAAGCTCTG
GCTCGGCCTCCTCTCGTCCCCTCGCTTCCGCGGTCGCTACCACGAGCACCATGGAGCTCCCCCCATGCTGGGTTTCCTTC
ATACCTGGCACTACGGCTCCCACCCCACCAAGGTAGAAGACCCCATCCCACACTTCACATCCACCGCCAAATTCGGCGCG
CGCATTCCCGACGACGAATGGGCCGACGACGAATGGGGGAACATTT------ACTACA---------------CTGCGTG
GGACTGCCGCCATGGCCGCGTCCTCCTTGGGGGTTCAAACCAGTTACCTAT---GCCGCTCGTCGTTTGGGACCCCATGA
CGGGTTGCCGGAGGAAGCTGCC--CGCCCCATGGATCTCGGACGACAGCCAC-------------GCTGCCGCGGTGCTC
TGCGCCGTGAGCGGCTGTGACCACCGCACTTGTCACTCGGCTCCCTTCCAGGTGGTCTT---------------------
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>chr1B_1023
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----TCGAGGATATCTTCCTCCGCCTTCCGCCGGACGAGCCCGCGTGCCTCGTTCGCGCCTCCCTCGCCAGCAAGCTCTG
GCTCGGCCATCTCACCGGCCCTCGCTTCCGCGGCCGCTACCGCGAGCTCCATGGAGCGCCCCCCATGCTGGGCTTCCTTT
ACGATTGGTTCTGGGACTA---CGTGCCGGAGGAGAAAGATGCCGTCCCGCGCTTCGTCTCCACCACGGGATTCGGCGCG
CGCGTCCCCCCCGACC------------ACCACTGGGGGGACTCGGGCTCGGACTACA---------------ACGCGTT
GGACTGCCGCCATGGCCGCGTTCTCCTCGGGGATTATGGCGCG---CCCAT---TCCGCTCGTCGTTTGGGACCCCATGA
CAGGCCGCCAAACCAAGATGGAAGCGCCCAAAGGACAGGATATCGGCAGC---------------GGGGCCGCGGTGCTC
TGTGCCGTCACCGGCTGTGACCACCGCGCGTGTCATCAGGGCGCCTTCAGGGTCGTCGTCTTCGGCAGCATGACCACCCA
TGTTTATCATCCTGTTACTATTATACAGGTGTGCGTGTCCTCGCCGGAGACGGGTGAGTGGAGCC------AGCCGTGCC
CTGGTCTTGATCTCGGAGTTGACGCATTCATCATGCCGGTGCCCCCTGTCGTCATCCGAGATGCAGTTTACTTGATGCAT
GCGCGTGGTGAGCATGATCACA------TTGCAGGAATTCTCAAGTACGACTTGGGCTCTAATTGCTTATCGCTGATTGA
CATGCCC------CTGCCGGGGGCTGTCAATGTCGGCGACGTCATCCTCATGGCCATGGAGGATGGCAGCTTGGGGCTTG
CACATGCCAGTGGATCAACCCTCTACCTGTGGTCAAGCTCAAGCCAGAT---GGGTGTTGCGACATGGACTCAGCGTAGA
GCCATCGATCTCAAAAGCCTTCTTCCCATTCAAAATCCCATGGAAGGACTTAGACTGATTGGATCCATGGAAGGCAGTGA
TATCATCTTCGTGCTTACGGACCTTGGCATCTACCAGATTAATCTTAACTCACTACAGTGGAACAAGATATGGAAGAGAC
AGAAATTCTTTGCTTTGATTCCGTACATGAGTTTCCACAATCCACAAGGTATATCTGTTATTCCCCTTCTTTTGTGGTTT
ATTAGGAACAACGCTTAAGCAGCAATAATATT-----TTGGTTAGCCCAACAAACAAAATA-CTGAATGTTTAATCAGAC
TGAAGAAAGTTTTACTTGATGATTCAGTTTGTGATGGTATGTGCGCTCGACCAAACTTTGAGAGCTATG------TACAC
TCGAACGTTACATCTAATTGGCAATTTTATATA------TGTCTTCT-CTTTTTGGAATCACACTCACAAATCTATGTTG
GCAGAAAGGATGACCCCCTGAAATGTGAAGCACTGACAACATATGTTTGAACGTGCTTAAGGGCAGGAGGCCACGATCAT
CAA-TAGGAAAGATGACTACTTGGAGTGGAGGCGACAT-GGGTCTTGTGATTAATC-GTGTCAGTAGTCAGTAGCTGTTT
AGTGC----ACTGGTGCTTGAATTCTCATAGTGATGTTGCCTTTGGTCAGTAAGCTTGATAATTTCCCCGTGTTGTTGTT
GTTGTGTGTAAGCAGGGGAATGGATTACCTTTGTAATTAACCTCTAATTTCTTGCAGCATCAGCTATGTGCTTTCTTGTT
TAATCTGCTTGAAAATGCATCTGCAGAAAATATCTTAGCTAGTGTTCCCAATTTGAAA-ACTTACAGTTAGCCCTCCAAG
CTTTGATCC-AGTCTCTAAATTGTAAATTCATCTCCCAAAAGAGGTACAACCGATGAGCAGATGAAGT-GGCATATCCAG
AGCTAGTGGTTT--------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr5D_1081
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--------------------------------------------------------------CCTTGCCAGCAAGCTCTG
GCTTGGACTCCTCTCCAGCGCTCGATTCCGCAGCCGCTACGTCGAGTTTCATGGTGCTCCGCCCATGCTGGGCTTCATTT
ATGCCTTGTCCTCC---TACGCCGAGCCGGAGGAGGACGAACCCGTCCCACGCTTTGTCTCCACCACGGAATTCGTCGCT
CGCGTTCCCGACGACGACTTGG------------------CGG---------ACTATA---------------TTGCGTT
GGACTGCCGCCATGGCCGCGTTCTCCTTGGTGATCGTGCTACA---CACAA---TCCACTTGTCGTTTGGGATCCCAAGG
CAGGCTGCCTGACGAAGATGCAAGCTCCCAAAGGACAAAA-CAGAACCA--------------CTGGGGCTGCGGTGCTC
TGTGTCGTGGCCGGCTGTGACCACTGCGCCTGTCACCACGGCCCATTCCAGGTTGTCTTCTTCGGCATGAGC--------
-GTTGATGGTGCTCATTGTGTTATACACCTGTCTGTCTTCTCGTCAGAGACACTTGGCTGGAGCGAGCCCCAGCCATGCC
CTGGTCTTGATCTTGGCAATGATGCATTCATCAAGCCAGCGTCCCCTGTCGCCATCCAAGGCGCACTTTACTTCATGCAA
GCGAGCTTGGAAGATGATCACA------TAACAGGATTTCTGAAGTACGACTTGGGCTCTAATTGCTTATCGCTGATTGA
TGCGCCG---ATGAGGGGATCTCTCATTATTGG---TGCCAATGTTCTCATGGCTATGGAGGACGACAGTTTGGGTTTTG
CACAAGTGAAAAGGTTAACCATCTACCTGTGGTCAAGGCATTTGGGTTCCGATGGAGTTACATCATGGACTCATCCTAGA
ATCATTGATCTCAAGAACCTTCTCCCCATTCAGAATCCTAGTAGAAGAATTCAACTGATTGGATCTCTGGAGGGTAGTGA
TATCATTTTCGTGACCACACACCTTGGCATCTACGAGCTTAATCTAAAGTCGCTACGGTGGAAGAAGCTATGGAAAACGA
AAAATGTTTGGCGTTTGATTCCGTACATGGGTTTCCCCAATCCACAAGGTATATCTA-TATGTCCTTTCTTTTGTGATAT
GT---GGACAAGTCTTAAGTAATAAT-A-------------CTAGCCAAACAAACAAAATA-TAC--TGTTTAATGAGAC
T---GAAAGTTTTACTTGATGTTTCAATTTGTGATAATATATGTGCTCATGCATACTTTCAAATGTT-------------
----------CACCTAATTGGCAA-TTTATATAGTATCGTGTCTTTTACCTTCTGAAATTACACATACAAATCTACGTTT
GCAGAAAGGATGATTTCTTGTGATGCGGCTCATTGACGATGTAGGGCTGAATATGCCTAAGGGCAGGTGGCCACTGTCAT
CAAACATGAAAGATGACCACTAGGAGGCGAG------T-GGGTCTTGTGATGAATT-ATAAAGTATCTAGTAGCTGGTTT
GGTGC----AATGGTGCTGGTATTCTCTTAGTGCTCGTAGCCTTTGTCTGTAATCTGAATAACATAAGCGGGTGAAT---
----------------GGATCGGATTATATTTGTTTTGAACCTCTAATTTCTTGCGGCATCAGCTATGTTCTCTGTTGTT
TAATTTGCTTGAAA-TGCAGCTGTAGACAATATCTTA----GTGTTCCCATTTTTAAACCTCTAAAATTTGCCCTCCAAG
CTTTGACCC-AACTCTAT--------ATTCATCTCCAAAAAGCGGTACAACTGTTGAGCAGATGCTGAGGGCATTACCAG
AGCTAGCGGTTTCTGTAATCTAATTATAAACCTGGGCTCATTTAACGTTTCCATAATATCATTGAAACCAAATATTCACA
TCCCC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AAGGCATGTCTATGCCTTG
CATCCATAGCAATATGTCCTTGTCAGTTTCTTGGGGAACCTTTCTACAAGAACGTATGACATTATAACTCAATTATAATC
CACTAGGTTGGGATTCACAACCT-GGGAGAGACTACTTGTGCATCACTGTTAAGTTGGTCTTCGGATTGTCATTTTTCCC
TATTGATAGATAAATAGTACTTGTTGCCAAGATTATGTATTGCAAAT
>chr5D_1310
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------------------------------------------------------------------------------TT
GGACTGCCGGCATGGCCGCGTTCTCCTTGGGGACTATGGTAAA---CCCAT---GCCGCTCATCGTTTGGGACCCCATGA
CAGGCCGCCGGACCAAGCTGGGAGCGCCCAAAGGATGCAATATGCCCTTGGACACCGACTTCGGTGGAGCCGCCGTGCTC
TGTGCCGTGGCAGGATGTGACCACCGGGCGTGCCATCAGGGCCCCTTCCGGGTTGTCTTCTTCGGCATGAGCACGGA---
---TGATGGTGCTCATGGTATTATACACGTGCGGGTGTCCTCGGTGGACACGGGTGAGTGGAGCG------AGCCGTGCC
CTGGTCTTGATCTTGGCGTCGAATCATTCATCACGCCAGTACCCCCTGTCTTCATCCAAGACACACTTTACTTTACACAT
AATATTGG------TGAACATGACGATCAAGCAGGAATTCTCAAATACAACTTGGGCTCTAATTGCTTATCGCGGATTGA
TGCGCCA------CGCGCATGGCCTCTCAGGGACGATTTCGCCATCCTCATGGCCATGGAGGACGGCAGTTTGGGTTTTG
CACAGGTGCATAGGTTAACCTTTTACCTGTGGACAAGACAGACGGGTTACGATGGAGTTGCATCATGGACTCAGCCTAGA
GTCATCGATCTCAAGAACCTTCTTCCCATCCAAAATCCCGATAAAAGACTTAGATTGATTGGGTCCGTGGAAGGCAGTGA
TATCGTTTTCGTTACCACAGATCTTGGCGTCTACCAGATTAATATAAAGTCGCTACAGTGGAAGAAGCTATGGAAGAGAG
AAAATT-CTATAGGTTGATTCCCTACATGAGTTTCCACCATCCACAAGGTATATCTA-TCTATCTTTTTTTTTATGATTT
GA---GGACAAATCTTAAGTAATTAT-ATATT-----ATAGTTAGCCAAACAAACAAAATAATTGAATGGTTAACTAGAC
T---GAAAGTTATATTTGATTTTTCATTTTGTGATAATATATCTGCTTGAGCGAACTTTTACTGCTATG------TGCAA
TCGACTGTTATACCTTGTTGGCAATTTTATATAGGGTCGTGTCTTCTTTTTTCTGGAATCACACTAATAAATCTATGTTT
GCAGAAAGGGCAATCCCTTGCGATGTGGCTCATTGACGACGTAGGAACTCAATA---TAAGGGCAGT------CACTCAT
CAA-TAGCAAAGATGACCAGTTGGAGGCGAC------AATGGTCTTGTGCTGAA-T-ATGAAGTATCTGGCTGCTTGTTT
GGTGC----AATGGTGCTTGTTTTCTCATAGTTTTGGTAG----------------------------------------
--------------------------------------------------------------------------------
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>SNPs
-----------------------S-S------------------------------------------------------
---S----------S------S-------S--------------------S---------------SS------------
------------------S-------------S-----S-----------------------------------------
--------S---------------SS-------------------------------------------------S----
------------------------S------S------------------------------------------------
---------------S-SSS------------------------------------------------------------
---------------------S-S--------------------------------------------S-----------
-----------------------S------------------S---------S-----SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS--------------S-------------------------------S-----S---------S---S
--S-SS-----------------------------S-S----S---S-----------------S------S--------
-------------S-----S--S--SSSS-SSSSSSSSSSSS--------------------------------------
-----------------------S-SSS-----S--SS-----S-SS---SSSSS--S-S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------SS-------------------------S----S-------------
--------------------------------------------------S----------------------------S
--S-----------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S------------------------------------------S------
S-------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S--------------------------------------------------S----
-------------------------------S------------------------------------------S-----
--------S-----------------------S-----------------------------------------------
-------------------S------S-----------------------------------------------------
--------------------------------------S----S-----------------------------S------
-------S------------------------------------------------S-----------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
-------------S--------S-----------------------------------S------------S-S------
---------S---------------------S-----S--------------------------S-S----S--------
----------------------------------S---------------------------------------------
----------SS-------S-------------S-S----SS--------------SS-------S----SS--------
----S------------------------------S----S--------S---------------------------S--
--------------S-S--S-----------S------------------------------------------------
---------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------
-----------S----------------------------------S----------S--S-----S-------------
--------S--S-------S--SS-----------------SS----------------S-----S------------S-
-S---------------------------------------------
>forward_652
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------------------------------------------------------------------------AGCACGGG
TTGATTGACCAT--------------------------------------------------------------------
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>reverse_2425
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------------------------GCATGAGTTTCCCCAGTCCA------------------------------------
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-----------------------------------------------
>forward_653
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-------------------------------------------------------------------------GCACGGG
TTGATTGACCATG-------------------------------------------------------------------
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>reverse_2764
--------------------------------------------------------------------------------
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-------------------------------------------CGGTTGAATATGAAGGGCAGG----------------
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-----------------------------------------------
