>input_sequence_52955
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-----------------------------------------------------------ATGGCCAGCCACTTCGTCCTC
AGCACCGGCGCCAAGATCCCGTCGGTCGGGCTCGGCACCTGGCAGTCCGAGCCCGGCGTTGTCGGCGACGCCGTCTACGC
CGCCGTCAAGGTGCGTGCGTACGTCGTCGCTGCAAACCGATGC-------------------------------------
--------------TCCTTCGCGCTGTCTGAATCTTACTC---TGCGTAATAATGCAGGCTGGTTACCGGCACATCGACT
GTGCTCAGGTCTACGGCAACGAGAAAGAGGTAACCAGATCGTCCCTCTCTCAAATTAACGATGTTAATTTGCATCAAAAG
GCAGGACACTAGACAACCT-------CTACGCCACTGCAGATCGGATTCGCCCTCAAGAAGGTGTTCGACGAGGGCATAA
CCAGCCGGCAAGATCTCTTCATCACCTCCAAGCTATGGTGAGCCTTTGCAGTGTTTGTCTTCCCATCCTCCCATCATCTG
AACATTGCCCATTCAGACACTCCAATTGCGAAAAAC--TGAGAAGTTAACGAGCGAAAATCTTGATCTGAATGTTTCGAG
GTGCACTAACCACGCGCCGGAGGACGTGCCGGTGGCGCTGGACGGCACGCTCCAGGACCTGCAGACCGACTACGTGGACC
TTTACCTCGTGAGCCCGCGCGCCATCTGACTGACTGCATTGCTGCAGTTTCTTCCACCCGGTATCTTGATTTTGATTCCT
GAGATGCATTCTTCGTTCTCGTCAGGTACACTGGCCGATCCGGATGAAGAAGGGCGCCGGCTTCAGCCCGGAGAACGTGA
TCCCGGCCGACATACCGGCGACGTGGGCGGCGATGGAGGGCGTCTACGACTCCGGCAAGGCCCGCGCCATCGGGGTCAGC
AACTTCTCGTGCAAGAAGCTGGAGGATCTGCTCGCCGTCGCGCGCGTGCCGCCGGCGGCCAACCAGGTGGAGTGCCACCC
CGTCTGGCAGCAGGCCAAGCTCCGGGACCTCTGCGCGTCCAAAGGGATACACTTCTCCGTACGTTAATGTCTCTCGTATA
GAAACACGCCATTGTTACTGTAGCTTTCCCGGTGTGTTCAACAGTTCATGCGTATGCAGGCCTACTCGCCGCTGGGCTCG
CCGGGGACGTTCAAAGCATTCACCGTGCTGGAGCACCCGGTGGTGGTGTCGACGGCGGAGAAGCTGGGGAAGACGCCGGC
GCAGGTGGCGCTGCGGTGGGGGATCCAGTCGGGGCACAGCGTGCTGCCCAAGAGCACCCACGAGGAGAGGATCAAGGCCA
ACTTCGACGTCTTCGACTGGTCCATTCCGAGCGACCTGTTCGCCGGCTTCTCTGAGATCGAACAAACAAGGCTGATCCGC
GGGAAATTCTGGACTCACCCGGAAGGCCTGTTCAAATCCGAAGAAGAGATCTGGGATGGTGAAATATAG-----------
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--------------------
>chr1A_1_TraesCS1A01G282600
CAAGAAGCTACAAATTGAGAGGGAGAAGAAAGAAGCGACGATCAAATGGGAGATCGAGAAGGCCAATACATTTGGAGAGC
TTGAGCTTGAGAAGAAGAGATTGCAAATCACACGAGACGCGGAGGATGCCAA--TAATGTTGATGGACGAAGGCCTCTTG
GACGAGCATGCAAAGAATTGGCTTGTGGGGATGAAGAAGAAGCTCAACG-ACATAAGGAGTACGAGGCAGCGAGGATGGC
TATGGCAGCAGCGGAAGAGAAGGCAAGGATGCAGGCGGAGCAGGCGGCAAGAATGGTCATGGAGCAGGCGGCATAGCTGG
CGTCTGGTGACTGATCCGGCCAGTGAGTGATCTGTTACACTCGAACTTTG-TTTTATGTTAGCGTGTCCAGATTGCTGAG
ATATGATTTGTTTTGCTTTGTTGTTTTTGTTTCAGAACGTTGAATTATGATGAATTTGTGTCGTATAATCCATGTGCATG
ACTTGCATGAATTTGAGGATCGTACGATCGATGTGCATGACTTGCATGAATTTGAGGGTACACATTTGAGATGTGTGATT
GAGCGACATGGTAAACGAGGGGTCATCTAACATTGTTTGCGGACACGTATAGATGTATAGGGCCGTATTTGCCAACTCCG
GCGGTAAATGCTCTTAGGGGCATTGCTTTCCGCCACGAGCAAATCGTTA--GGGTGTCGGCGTAGTCTTGTGCTCTTGGC
CGTCAGAAGGTAAA----GACACGACAGCACCACGTTTGGCGTGTCTGTGTCCT-----CCAGCCCCACTGGCACGTGCA
ATTGCACGGTCGCTGCCGCATCGACATCACTGCCTCACCGGTAACAGCGACGCGAACTTCATTGCCGGCCCGCAGTGCCT
CTACAAGTTGGCCCGTGCGAGTGCGATCGAGCAGTCGGTCGCCGTCTCTCGTCTC--CGCGCGCATCTTCCACTCGGTTC
CCACTTGCAAGTGCGAACACACTCTGCGCACGCTAGCTACGTACGAGCGCTG--AAGGCATGGCCAGCCACTTCGTCCTC
AGCACCGGCGCCAAGATCCCGTCGGTCGGGCTCGGCACCTGGCAGTCCGAGCCCGGCGTTGTCGGCGACGCCGTCTACGC
CGCCGTCAAGGTGCGTGCGTACGTCGTCGCTGCAAACCGATGC-------------------------------------
--------------TCCTTCGCGCTGTCTGAATCTTACTC---TGCGTAATAATGCAGGCTGGTTACCGGCACATCGACT
GTGCTCAGGTCTACGGCAACGAGAAAGAGGTAACCAGATCGTCCCTCTCTCAAATTAACGATGTTAATTTGCATCAAAAG
GCAGGACACTAGACAACCT-------CTACGCCACTGCAGATCGGATTCGCCCTCAAGAAGGTGTTCGACGAGGGCATAA
CCAGCCGGCAAGATCTCTTCATCACCTCCAAGCTATGGTGAGCCTTTGCAGTGTTTGTCTTCCCATCCTCCCATCATCTG
AACATTGCCCATTCAGACACTCCAATTGCGAAAAAC--TGAGAAGTTAACGAGCGAAAATCTTGATCTGAATGTTTCGAG
GTGCACTAACCACGCGCCGGAGGACGTGCCGGTGGCGCTGGACGGCACGCTCCAGGACCTGCAGACCGACTACGTGGACC
TTTACCTCGTGAGCCCGCGCGCCATCTGACTGACTGCATTGCTGCAGTTTCTTCCACCCGGTATCTTGATTTTGATTCCT
GAGATGCATTCTTCGTTCTCGTCAGGTACACTGGCCGATCCGGATGAAGAAGGGCGCCGGCTTCAGCCCGGAGAACGTGA
TCCCGGCCGACATACCGGCGACGTGGGCGGCGATGGAGGGCGTCTACGACTCCGGCAAGGCCCGCGCCATCGGGGTCAGC
AACTTCTCGTGCAAGAAGCTGGAGGATCTGCTCGCCGTCGCGCGCGTGCCGCCGGCGGCCAACCAGGTGGAGTGCCACCC
CGTCTGGCAGCAGGCCAAGCTCCGGGACCTCTGCGCGTCCAAAGGGATACACTTCTCCGTACGTTAATGTCTCTCGTATA
GAAACACGCCATTGTTACTGTAGCTTTCCCGGTGTGTTCAACAGTTCATGCGTATGCAGGCCTACTCGCCGCTGGGCTCG
CCGGGGACGTTCAAAGCATTCACCGTGCTGGAGCACCCGGTGGTGGTGTCGACGGCGGAGAAGCTGGGGAAGACGCCGGC
GCAGGTGGCGCTGCGGTGGGGGATCCAGTCGGGGCACAGCGTGCTGCCCAAGAGCACCCACGAGGAGAGGATCAAGGCCA
ACTTCGACGTCTTCGACTGGTCCATTCCGAGCGACCTGTTCGCCGGCTTCTCTGAGATCGAACAAACAAGGCTGATCCGC
GGGAAATTCTGGACTCACCCGGAAGGCCTGTTCAAATCCGAAGAAGAGATCTGGGATGGTGAAATATAGTCTGAACA--G
AACAGTCACTGTTCCTTGAGCGGAGGCTGCCAAGT-------GCTGCCATGGCAACAGAATAATGCGGTAGTAATAATCA
GCAGTCGAAGGAGCTCGAGCTTCGCTGCTGCTGGTATGTAGAGCAATTTGCATGAGTGATTTGAGTTCAGAATCCTCCCT
GGAAGTTGTAAAATACAAATAGCTTTGTCCTGCTCTGTCA--TTTTTGTTTTGATGCATTAGTCAATCCAAAGTCATTGT
GAAAAA--AAGCAGATAGAACAGTTCATTG--------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------CAGTGTCACCACCAACAAGGCCTTCTAATTTACTGCAA
TGTCCCCTC-ACTGTGCTAGATACTGCCTGCAAAGGCCACCGCAGCA---------------CTTGCCGAGATGGTGCTC
CAGTCGTCGCTTC------CGGCACCACCACCACCACAAACATAG----TAGAAAACCAGGCCGCCGACGAGCGTAGAGG
CGAGCGGAACCGTCAGGTTATCGTCCAAGCGCGTGCTGACGGGGAGTGACTCGACGGTCGCCGCGGCAAGCGACGTGATG
CCGAAGCCAACGGCCATGGTCCAGCTCTGCTCGACGAACCCGAAAAGGTCGAAGTAGCACATGAAGCTGCAGGTACACCA
CATCCAGTTCTAGTTTCAGTCATACAGTTACAGACAACAAAACAAAAGATGACCTGGGACTTCATTGCTC----------
----------TTTTGCTTACAGGACCGATGACACGAAGCCGGCGAAGAACATTGCGGTGGTTCCGGTGTAGGATTTGTCG
GTATTGTAAGGGAGCTTCGCGCAGCCGAATCGCCTCCCGGCTATGTCAGCCACACCTAAAAGAAGTAGCATACATAGTTA
TGCTGTTTTCTGAAACCTTCCCTTGAACAATCAAATTAAGGAGAATGTAGCACCGGACAAAAATTTAACTGCATGAGAAA
GAACTTGGTACCATCACCCGCGCACAAATTGCAAATCACGGCGATGGAAACGGGAGAAGTCCTCCAAAAGATTACAGCAG
CGAAATCTAAAGCCCGGCGT
>chr1D_23
----------------------GAGAAGAAAGAAGCGACGATCAAATGGGAGCTCAAGAAGACCAATACATTTGGAGAGA
TTGAGCTTGAGAAGGAGGGATTACAA--------AGACGCGGAGGATGCCAAGATAATGTCGACAGACGAAAGCCTCTTG
AACGAGCATGCAAAGAATTGTCTTGTGAGGATAAAGAAGAAGATCAACGAACATAGAGAGTACGAGGCAGCGAGGGCGGC
TATGGCAACAGCAGAAGAGGAGGCAAGGATGGTCGCGGAGCAAACAACATGGATGGCCTCCGGCGAA-------------
-----------TGATCCAGCCAGCGAGTGATCCGTCACGCTCGGACTTTGATTTCATTTTGGCATGTCCA---TGTTGAG
CTATGATTTGTTTTGCTTTCTCGTATT--TTTCGGACCGTTGAATCATGATGAATTTGTGTTGTAGGACCGAC-------
--------------------------------GTGCATGACTCGCATGAATTTGAGAATTCACATATGAGATGTATGACT
ATACTAC-----AGACGAGGGGCCATCAGACGCTGTCTGTAGACGCGCCCGGACGTGT------GGATTTACCGAGTCCG
GGTGTAGATGC--------GCATTGCTTTCCGCCACGTGCAAATCGTTA--GGGTGTCGGCGTACTCTCGTGCTCGTAGC
CGTCAGAAGGTAAAGAAAGACACGACAGCACCACGTTTGGCGTGTCTGTGTCCT-----CCAGCCCCACTGGCACGTGCA
AGTGCACGGTCGCTGCCGCATCGACATCACTGCCTCACCGGTAACAGCGAGGCAAACTTCATTGCCGGCCCGCAGTGCCT
ATACAAGTTGGCCCGTGTGAGTGTGATCGAGCACTCGGTCGCCTTCTCTCGTCTC--CGCGCAG--CTTCCACTCGATTA
CCACTTGCAAGTGCAAACATA----GCGCACGCTAGCTAGGTACGAGCGGT---AAGGCATGGCCAGCCACTTCGTCCTC
AGCACCGGCGCCAAGATCCCGTCGGTCGGGCTCGGCACCTGGCAGTCCGAGCCCGGCGTCGTCGGCGACGCCGTCTACGC
CGCCGTCAAGGTGCGTGCGTACGTCGTCGCTGCAAACCAATTGACAACGAACTCGAATCATGTCGAAAATGCGTGTGGAT
TTGGCATCCGCTGGTGCCTCGCGATGTCTGAATCTTTAGTGTGTGCGTGATTATGCAGGCTGGGTATCGGCACATCGACT
GTGCTCAAGTCTACGGCAACGAGAAAGAGGTAATCAGATCGTCCCT--CTCTCATATTAACGACGG--TTGCATCAAAAG
GCAGGACACTACACAACCT-------CTACGCCTCTGCAGATCGGATTCGCCCTCAAGAAGGTGTTCGACGAGGGCATAA
CCAGCCGGCAAGATCTGTTCATCACCTCCAAGCTATGGTGAGCCTT-GCAGTGTTTGTTTTCCCATTCTTC---CATCTG
AACATTGTCCACTCACACACTGCAAGTGCA---TATTTTGAGAAGTTTACGAGAAAATTCCAATCTGAACTTCCTAT-AG
GTGCACTAACCACGCGCCGGAGGACGTCCCGGTGGCGCTGGACGGCACGCTCCAGGACCTGCAGACGGACTACGTGGATC
TCTACCTCGTGAGCCCGCGCGCCATCTGACCGACTGCATTGCTGCCGTTTCTTCCACCCGGTATC-----TTTGATTCTT
GAGATGCATTCTTCGTTC--GTCAGGTACACTGGCCGATCCGGATGAAGAAGGGCGCCGGCTTCAGCCCGGAGAACGTCA
TCCCGGCCGACATACCGGCGACGTGGGCAGCGATGGAGGGCCTCTACGACTCCGGCAAGGCCCGCGCCATCGGCGTCAGC
AACTTCTCGTGCAAGAAGCTGGAGGAGCTGCTCGCCGCCGCGCGCGTGCCGCCTGCGGCCAACCAGGTGGAGTGCCACCC
CGTCTGGCAGCAGGCCAAGCTCCGGGACCTCTGCGCGTCCAAAGGGATACACTTCTCCGTACGTTCATGTCTCTCTTATA
GAAGGATGCCATTGTTACTGTAGCTTTCCCAGTGTGTTCAACAGTTTATGCGTATGCAGGCCTACTCGCCGCTGGGCTCG
CCGGGGACGTTCAAAGCGTTCAGCGTGCTGGAGCACCCGGTGGTGGTGTCGGCGGCGGAGAAGCTGGGGAAGACGCCGGC
GCAGGTGGCGCTGCGGTGGGGGATCCAGGCGGGGCACAGCGTGCTCCCCAAGAGCACCCACGAGGAGAGGATCAGGGCCA
ACTTCGACGTCTTCGACTGGTCCATTCCGAGCGACCTGTTCGCCAGCTTCTCTGAAATCGAACAAACGAGGCTGATCCGC
GGGAAATTCTGGACTCACCCGGAAGGCGTGTTCAAGTCCGAAGAAGAGATCTGGGATGGTGAAATATAGTCTGAAGTCTG
AACAGTTGCTGCTCCTAACGCGGAGGCTGCCATGGCATG---------ATGGCAACGGAATAACGTGGTAGTGATAATCA
GCAGTCGAATGAGCTCGAGCTTGGCTGCTGTTGGTGTGTA-----ATTTGCATGAGTGATTTGAGTCCAGAATCGTCCCT
GGAAGTTGC-AAAGAAAAATAGATTTGTCGTCCTCCGTCA--TTTATGTTTTGATCCATTAGTCAATCCAAGGTCATTGT
GAAAAAA-AAGCAGATATGACAGTCCAGTG--------------------------------------------------
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--------------------
>chr1B_610
--------------------------------------------------------------------------------
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-----------------------------------------------------TGTATAGGGGACGGATTTGACTCCGGC
TGCAGT--TGTTCTTGGGGGCATTGCTTTCCGCCACGAGCAAATCGTTGCGGGGTGTCGGCGTAGTCTCGTGCTCGTAGC
CGTCAGAAGGTAAAGAAAGACACGACAGCACCACGTTTGGCGTGTCTGTGTCCTCCAGCCCAGCCCCACTGGCACGTGCA
ATTGCACGGTCGCTGCCGCATCGACATCACTGCCTCACCGGTAATAGCGACGCAAACTTCATTGCCGGTCCGCAGCACCT
ATACAAGTTGGCCCGTGCGAGTGTGATGGAGCACTCGGTCGCCTTCCCTCGTCTCCGCGCGCAG--CTTCCACTCGATTA
CCACTTGCAAGTGCAGC---------------------AGGTACGGGCGGTAACAAGGCATGGCCAGCCACTTCGTCCTC
AGCACCGGCGCCAAGATCCCGTCGGTCGGGCTCGGCACCTGGCAGTCCGAGCCCGGCGTCGTCGGCGACGCCGTCTACGC
CGCCGTCAAGGTGCGTGCGTACCTCGTCGCTGCATACCAATTGACACTGAGCTCGAATCATGTCGAAAATGCGTGTGAAT
TTGGCATCCGATGGTCCTTCGCGCTGTCTGAATCTTGCTC---TGCGTAATAATGCAGGCTGGTTATCGGCACATCGACT
GTGCTCAGGTCTACGGCAACGAGAAAGAGGTAATCAGATCGTCCCT--CTCAAATTAACGATGTTAATTTGCATCAAAAG
GCAGGACAACAGACAACAGACAACCACTACGCTTTTGCAGATCGGGTTCGCTCTCAAGAAGGTGTTCGACGAGGGCATAA
CCAGCCGGAAAGATCTTTTCATCACCTCCAAGCTATGGTGAGCCTT-GCAGTGTTTGTTTTCCCATTCTTC---CATCTG
AACATTGTCCACTCATACACTGCAAGTGCAAATTATTTTGAGAAGTTTACTAGAAAATTCCAATCTGAATTTCCTTA-AG
GTGCACTAACCACGCGCCGGAGGACGTCCCGGTGGCGCTGGATGGCACGCTCCAGGACCTGCAGACCGGCTACGTGGATC
TTTACCTCGTGAGCCCGCGCGCCATCTGACCGACTGCATTGCTACCATTTCTTCCACCCGGTATC------TTGATTCCT
GAGATGCATTCTTCGTTC--GTCAGGTGCACTGGCCGATCCGGATGAAGAAGGGCGCCGGCTTCAGCCCGGAGAACGTCA
TCCCGGCCGACATACCGGCGACGTGGGCGGCGATGGAGGGCCTCTACGACTCCGGCAAGGCCCGTGCCATCGGCGTCAGC
AACTTCTCGTGCAAGAAGCTGGAGGAGCTGCTCGCCGTCGCGCGCGTGCCGCCGGCGGCCAACCAGGTGGAGTGCCACCC
CGTCTGGCAGCAGGCCAAGCTCCGGGACCTCTGCGCGTCCAAAGGGATACACTTCTCCGTACGTT-ATGTCTCTCGTATA
GAAACACGCCATTGTTACTGTAGCTT-CCCAGTGTGTTCAACAGTTCATGCATATGCAGGCCTACTCGCCGCTGGGATCG
CCGGGGACGTTCAAATCATACAGCGTGCTGGAGCACCCGGTGGTGGTGTCGACGGCGGAGAAGCTGGGGAAGACGCCGGC
GCAGGTGGCGCTGCGGTGGGGGATCCAGGCGGGGCACAGCGTGCTCCCCAAGAGCACCCACGAGGAGAGGATCAGGGCCA
ACTTCGACGTCTTCGACTGGTCCATTCCGAGCGACCTGTTCGCCGGCTTCTCTGAAATCGAACAAACGAGGCTGATCCGC
GGGAAATTCTGGACGCACCCGGAAGGCGTGTTCAAGTCCGAAGAAGAGATCTGGGATGGAGAAATCTAGTCTGAGCAGTT
GCGGAGGGAGGGCAGGCAGCTTACTTTCGTATGTCGGAGGAGGCTGCCATGGCAACGGAATAACGTGGTAGTGATAATCA
GCAGTCGAATGAGCTCGAGCTTGGCTGCTGTTGGCATGT------ATTTGCATGAGTGATTTGAGTCCAGAAT-------
--------------------AGCTTTGTTCTCCTCTGTAATTTTTATGTTTTTATTCATCAGTCAATCCAAAGTCATTGT
GAAAAAAGAAGCAGATATAACAGTCCATTGTTGACATGTTGACATACGAGTTGCAAGTTCTGAATAACATATGCAGATGC
AGATACTGGGAAATCCAAATTTAAGTCAGAACTCTGTTACAGAGACACAAACCGGATTTTTTTTTTTTTTGAACAAGCAA
AGGCACCAAAAGGTGCCACATATTTCATTCAGCTCAAAGAGATTGAACAAAGTGTGCTACATAGATCTGCCAAAGATGGA
AAGAAAAAGATGCAGAAACTACGAGGGGGAGCTGAAGAAAGGATCCTAGTAGGGCAAAGTGGCCAGAAGCACTATGCCGT
GAGCAACATGATCAGAACTAGAGGAGAAAACATCTGAGAAAAAGAAAACAAAGAAGACCTTGATCTCCTCCGAACAAGCA
GCCCAATGAATGAATTATTGGGCAAGAAAACTGCCAACAACATTTTGTGCCAGAGATGCTTGACCTGCCTTAGAAGCAAT
GCACCGTGTGCAGTTGAATACCTGCAAGTTGAAAGTTTGAAAGAAGGGCCACCACTGGACATGGAGAATTTGAGTGAGCA
TGAGCAAAACAAGCAACTTGCGTCTCTCCGACAGATCGGAAAACCTGCTGAGCCAGATTATGAGCGACACCATTGATTTC
CCTGAAAACATGAAACACTTGAGCAGCTAAATTAGACGTAACTTTGAGAAAAGTAGCCAACTCTTTTCTAATGTTCCAAT
GAGCAGCAGAATCTGAAATATTTCTTGAGGCAGCAGCAGAAGCAAGAGAAAGACAGTCCGTTAGAAACGTGGGATTAGTA
ATATTAAGCTGAGCGGCAAGATAAGCTGTACAAGAAAGGGCAACTGCCTCGGCTTGAAGGGGAGTTGAAGTTGAAGAGGC
CGAAACTTGAACCTGAATACTAGCCGGATTGAACCAGCACTCATTGACAGCCCGCAAAGACCATATTGAACCAGAACTCA
TTGACAGCCCGCAAAGACCATCTCGGCAACTGCAGTTCATTGCAGTGTCACCACCAACGAAGCCTTCCAATTTACTGCAA
TGTCTAGTTAACTGTGCTAGCTACTGCCTGCAAAGGCCACCGCAGCA---------------CT---------------C
CTGTCGCCGCTTC------CGGCACCACCACCACCAACATAGTAAAAATTAAAAAACCAGGCCGCGGACGAGCGCAGAGG
CGAGCGGCACCGTCAGGTTATCGTCCAAGCGCGCGCTGACGGGGAGTGACTCGACGATCGCCGCGGCAAGTGACGTGATG
TAGAAGGCAACGGCCATGGTCCGGCTCTGCTCAACGAACCCGAAAAGGTTGAAGTAGCACATGAAACAGCAGGCATACCA
CATGCAGTTCTTGTTTCGGTCTTACAGACAATAAAACTGCAGGTATACCACATTCACAGTTCTA----------------
----ATTTCTTTTTGCTTACATGATCGATGCGATGAATCCGGCCAAGAACATTGCGATGGTTCCGGCGCAGGACTTGTCG
GGATTGTAAGGGAGCTTCGCGCGGCCGACTCGCCTCCCGGCTATGTCAGCCATACCTAAAAGAAGCAGCAT---------
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>chr5D_2661
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-----------------------------------------------TCACTACCAACAAAGCCTTCCAATTCACTGCAT
CGTTTCCTT-ACCGTGCTAGCTACTGCCTGCAAAGACCATCGCAGCTGTCGCCAAGATGCTGCT---------------C
CCGACGCCGCTTC------CAGCACCGCCACCACCACCAACATAG----TAGAAAACCAGGCCGCCGACGAGCGCAGACG
CGATCGAAGTTGTCAGGTTATCGTCCAAGAGCGTGCTGACCGGGAGTGACTCGACAATCGCCGCTGCAAGCGAGGTGACG
CAGAAGGCAGCGACCATGGTCCAGCTCTGCTCCACGAACCCGAAAAGGTGGAAGTAGCACATGAAACTGCAGGCATACCA
CATTCAGTATTTGTCTCGGTC------TTTCAGACTGTAAAACAAGAGATGACTTCAGGCTTCAGGGTCAAGTAGGATGT
ATGCATATCTTGTTGCTTACAGGATCGATGCGATGAAGCCGGCGAAGAACATTGCGATGCTTCCGGCGTAGGATTTGTCG
GGATTGTGAGGGAGCTTCACACGCCCGAACCGCCTCCCGGCTATGTCAGCCACACCTGAAAGAAGCAGCATACATAGT--
--CTGTTTTCTGAAACCTTCGCTCGAAGAATCAAAGGAGAACGTA-GTAGTGCCGGACAAAAATGTAATTGCATGAGAAA
GAACTA-GTACCGTCCCCCGCACATAAGTTGCAAATCACAGCGATCGAAATGGGAGACGTCCGCCAAAAGATTAC-----
--------------------
>chr5B_2698
--------------------------------------------------------------------------------
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----CCCTT-ACTGTACTAGCTACTGCCTGCAAAGACCATCGCAGCA---------------GT---------------C
GCCAAGATGCTGCTCCCGTCGCCGCCGCCACCACCACCAACATAG----TAGAAAACCAGGCCGCCAACGAGCGCAGAGG
CGATCGAAGTCGTCAGGTTATCGTCCAAGAGCGTGCTGACAGGAAGTGACTCGACAATTGCCGCTGCAAGCGACGTGATG
CCGAAGGCAGCGACCATGGTCCAGCTCTGCTCCACGAACCCGAAAAGGTGGAAGTAGCACATGAAACTGCAGGTATACCA
CATTCAGTATTAGTTGCGGTC------TTTCAGACTGTAAAACAAGAGATGACTTCAGGCTTCAGGGTCAAGTAGGATGT
ATGCATATCTTGTTGCTTACAGGATCGATGCTATGAAGCCGGCGAAAAACATTGCGATGCTTCCGGCGTAGGATTTGTCG
GGATTGTGAGGGAGCTTCACATGCCCGAATCGCCTCCCGGCTATGTCAGCCACACCTGAAAGAAGCAGCATACAAAGTCA
TGCTGTTTTCTGAAACCTTCGCTCCAAGAATCA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSS------------------------------S--S-----S-----------------S
--------------S--S----S---SSSSSSSS--------------------------S--SS------S--------
S-------------------S------S----S---------S------------SS------------------SS---
-------S----S------S-----------SSS--------SS-SS--S-S----S-SSS-SSS-SSSSSSSSSSSSSS
SSSSSSSSSSS------S-----S--------S--S--S----S----------S--S--S--S------SSS--S----
S------------------S-S--S--SS----S--S--------S---------------S---SS-S-S-SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S-------------SS-S-----S--------S---S-
SSS-S--SSSSS-S--------S----SS--SS---S--SS---S--SSSS-----------SS-S----S--S------
-SS---S--------S----------------------------------------------------S------S-S--
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
S----------------------S---------S---------S------------------SSSS----------S--S
--------------S----S-SSSS--------------S---------S-S----------------------------
-----------------------------------------------------------S--------------------
--------------------------------------S--SS-------------------------------------
------------------------------------S-----------------------------S-------------
---------------------------------S------------SS--------------------------------
---------------------------------S----------------------------------------------
----------------S-----------------------------S-----------S-------S--S-SSS------
-------S---S---S-----S---S---S--SS-S-----------S-----SS--SSS-SSSS-SSSSS-SS--SS--
---------------------------S--------------------------------------------------S-
------------------------------S--------------S-------------------SSSSS----------
------------------SS----------------------------------------------------------S-
-----------------------------------------S-------------------------------S------
--------------------------S-----------------------------------------------------
-----------------------------------------------------------------S--------------
------------------------------S-------------------------------------------------
----------------------S---------------------------------------------------------
----------------------------S----------------S----------------------------S-----
-------------------------------------------------------S-----------S------------
---------------------------S-------S--------------------------------------------
------SS---S----SSS-------------S-S---------------------S------S-S------S-------
---------S------------S-------S---------SSSSS---------------------S-------S-----
--------SS---S-S---------------S-------------S---------S------------------------
-----------------S------S-------------------------------------------------------
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------------------------------------------------------------S------S------------
--------S-----------S-------------------------------------------SSSSSSSSSSSSSSS-
-S----S------------------------------S------------------------------------S-----
--------------------------------------------------------S-----------------------
------S-------------------------S----------------S---------------S---------S----
---S-------------S---S--------------SS-------S-------S-SS-S-----SS-SSS----------
------------------------S-----SS-S----------------------S---------S-------------
-S--------------------S------------------------------------------S------------S-
--------------------S--S---S-------SS-SSSS-S-S----SS------------S---S-----------
-----SS-----S--S-----S--S--S-----------S-----S----S------S----S------------SSSSS
SSSSSSSSSSSSSSSSSSSS
>forward_356
--------------------------------------------------------------------------------
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----------------CGGCCAGTGAGTGATCTGTT--------------------------------------------
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>reverse_2315
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--------------------------------------------------------------------------AGGCCA
ACTTCGACGTCTTC------------------------------------------------------------------
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>forward_1457
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-----------------------------------------------------------------------------TAA
CCAGCCGGCAAGATCTC---------------------------------------------------------------
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>reverse_4477
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------GCAG
CGAAATCTAAAGCCCG----
