>input_sequence_52942
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---------------------------------------------ATGCCCTACGCCGACGCGGACCGCACCCTCCGCGC
GCTCGCCGCCGCCGCCGAGGGCTTCGGCCGCCGCGCCATCGGGGGCCTCCACGGCACCCTCTACCACGTCACCTCCCTCC
AAGGTCCCCTTTTT---ACCCGCCTTCAGTTTTGCTCCGGAGCCCTGT---CAGGA------------------------
----ATCGG--GATTGATTGATGGGCGCGCAGACGACGGGCACGGGACGTTGCGGGAGGCGTGCCGAGCCAAGGAGCCGC
TGTGGGTCGTCTTCGAGGTGTCCGGCGACATCCACCTCCACACCTACCTCCGTGTCTCCTCCCACAAGACCATCGACGGG
CGCGGGCAGCGGGTCCGGCTCACCGGCAAGGGGCTCCAGCTCAAGGCTTGCCACCACGTCATCGTCTGCAACCTCCAGTT
CGAGGCCGGCCGCGGGCACGACGTCGACGGCATCCAGATCAAGCCCGGCTCCACCAACATCTGGATCGACCGCTGCTCCC
TCGCCGACTACGACGACGGCCTCATCGACATCACGCGACAGAGCACCGACATCACCGTCTCCAGGTCCT-----TCCCTC
TTTTCTACTGTCCCTCCTGACA--------------------------------------CCAACTAAATTTCTGTGTAC
AACATCACGCG---------------------------------ATCTTCAGTTCTTCACTCATTTCGTTTGATAATTGT
---GCTGATGAACATGTGCCTGTGTGTGACCGTGCTGCTGCACAGATGCCACTTTGCAAAGCATGACAAGACGATGCTCA
TTGGCGCGGACCCAACACACGTCGACGACAGGTGCATCAGGGTGACCATCCACCATTGCTTCTTTGACGGCACGCGGCAG
AGGCACCCGCGCCTGCGCTTCGGCAAGGTCCACCTCTACAACAACTACACCAGGGACTGGGGCATATACGCCGTCTGCAC
CGGCGTCGAAGCTTAGGTGACTCATTTCATCCGGCATCTGCTATTCCGAATGCTTGCAACTGGCAACACTCACTTGGAGA
TGATCAAT--CTGATGAAATG----ATACCTCCATTTGCAGATTGTATCTCAGTGTAACATATACGAAGGAGGGCATAAG
AAGACGGTCTTCAAGTACATGCCAGAGAAGGTACCTGCATTCAGAGTTTCAGTCTTTCAGACAAGATGAG---ATGAGAC
TCTGCATTTGCATACATCCCAGTTTACAGCTA----------------ATAGCTGAATGCTGCTGCAGGCTGCCGACAGA
GAAGAGACGGTGGCCGGGTGGATCAGGTCGGAGGGCGACGCGTTCCTGCACGGGGCGCTGCCGTGCCTGGTCGATGGTCC
GGGCGCTGAGTATGTCTTCAGGCCGGAGGAGTACTATGACAGGTGGACGATGGAGGCGGCGTCGCCGGCGCTCAAGGAGG
TCATTCAGCTCTGCGCTGGGCGGCAGCCTGTGCCCAGGCCCCCAGACTGCTAG---------------------------
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>chr2A_1_TraesCS2A01G091500
ACGGCAACTGTGATTCTTTGCCACACGGCAACTGCAGTTACGCGAACGTGGCAACTCGGTACACACAACATGGCAACTAT
AATTCTTTGCTACACGGCAACTGTAGTTGCGCGTACGTGGCAACCAGATAAACACACATGGCAACTGTGATTAACAATAC
ATGATAACTATGGTTGGACCACACGTGGCAACTAGGTAAACACACATGGCAACTACTGTTTTGACCATATGTGGCAAGTA
GTTAATCACACAGGGCAACTACGATTTGATTACACGCGGCAACTACTATAAATTAGACACGACAACTATACTTAACCAAA
ACAGAATAGAGTTGCCATGCTTTTACAACTACACTTGCCATCCCAGATAACTATATCTGCCAACCAGGATGGCAACTAAA
TCGTCATCCCGCGGGGTACCTAACGTAGCTGCGTCAGGACGTGTGGGCA-TTTTTGCTTCGTGCCACACGCACGGGGTGG
AGATGAGTAGTATTT-GTTGGGCGTGTAGCACGAAGTAGCCGCGCCCACACGTGTGGGCAATTCCAATGTCCGCCCACAC
ACAGCCCGTGTGGGCTGCCTCCTGCTCACACCACACACGGTGTGTGGGCGCATGTCGTATATGCCACACGTGTGGCAGTT
AACAACGTCTTTATTTTTTCATGTTTTATGAGTTATGTCTTGCGTCTATATTGTGTTTCTAAAAAAGAAAGAGAAAGAGA
AAAATCTTTTCCTCTTCGACAAGAGAGGAAAAGAAGACTTGGGTTGAGTACGGACCGCTTACGGGTGAAAATCTACGCAC
TGGACCTACGCACTAATCCCACCCCTGTTTCTCCCGCCTCTGCTGCTGCTGGATTTCCTTCCCCTCCTCCGACCCCCGTC
GCCCGCGTCCTCCTCCGACTCCA---GCCGCCGCCGCCGCAGCCTACCTCCCCTGCCCCGACATGGACGCCGAGACGGCG
CCGGGGACGGTGACGACGGAGGCCCACCGCCCCCCGCAGCCGCGGATGCCCTACGCCGACGCGGACCGCACCCTCCGCGC
GCTCGCCGCCGCCGCCGAGGGCTTCGGCCGCCGCGCCATCGGGGGCCTCCACGGCACCCTCTACCACGTCACCTCCCTCC
AAGGTCCCCTTTTT---ACCCGCCTTCAGTTTTGCTCCGGAGCCCTGT---CAGGA------------------------
----ATCGG--GATTGATTGATGGGCGCGCAGACGACGGGCACGGGACGTTGCGGGAGGCGTGCCGAGCCAAGGAGCCGC
TGTGGGTCGTCTTCGAGGTGTCCGGCGACATCCACCTCCACACCTACCTCCGTGTCTCCTCCCACAAGACCATCGACGGG
CGCGGGCAGCGGGTCCGGCTCACCGGCAAGGGGCTCCAGCTCAAGGCTTGCCACCACGTCATCGTCTGCAACCTCCAGTT
CGAGGCCGGCCGCGGGCACGACGTCGACGGCATCCAGATCAAGCCCGGCTCCACCAACATCTGGATCGACCGCTGCTCCC
TCGCCGACTACGACGACGGCCTCATCGACATCACGCGACAGAGCACCGACATCACCGTCTCCAGGTCCT-----TCCCTC
TTTTCTACTGTCCCTCCTGACA--------------------------------------CCAACTAAATTTCTGTGTAC
AACATCACGCG---------------------------------ATCTTCAGTTCTTCACTCATTTCGTTTGATAATTGT
---GCTGATGAACATGTGCCTGTGTGTGACCGTGCTGCTGCACAGATGCCACTTTGCAAAGCATGACAAGACGATGCTCA
TTGGCGCGGACCCAACACACGTCGACGACAGGTGCATCAGGGTGACCATCCACCATTGCTTCTTTGACGGCACGCGGCAG
AGGCACCCGCGCCTGCGCTTCGGCAAGGTCCACCTCTACAACAACTACACCAGGGACTGGGGCATATACGCCGTCTGCAC
CGGCGTCGAAGCTTAGGTGACTCATTTCATCCGGCATCTGCTATTCCGAATGCTTGCAACTGGCAACACTCACTTGGAGA
TGATCAAT--CTGATGAAATG----ATACCTCCATTTGCAGATTGTATCTCAGTGTAACATATACGAAGGAGGGCATAAG
AAGACGGTCTTCAAGTACATGCCAGAGAAGGTACCTGCATTCAGAGTTTCAGTCTTTCAGACAAGATGAG---ATGAGAC
TCTGCATTTGCATACATCCCAGTTTACAGCTA----------------ATAGCTGAATGCTGCTGCAGGCTGCCGACAGA
GAAGAGACGGTGGCCGGGTGGATCAGGTCGGAGGGCGACGCGTTCCTGCACGGGGCGCTGCCGTGCCTGGTCGATGGTCC
GGGCGCTGAGTATGTCTTCAGGCCGGAGGAGTACTATGACAGGTGGACGATGGAGGCGGCGTCGCCGGCGCTCAAGGAGG
TCATTCAGCTCTGCGCTGGGCGGCAGCCTGTGCCCAGGCCCCCAGACTGCTAGCCCTGTGACTCATGGAAGTTCAGGTTC
AGG-------CCCAACAACTGCAAACCTGAACGACTGATCCATTGGCGT-----AATTGTA-TGAGATTTTACTCGCTTA
TCCTCTGCTGGAATTGTAATAAACTCTTAGCTTGTGATACGATTGATCTTGAGTGATTAGAG--CATGAAACTGTTGCTC
TGTGGAAGAGAGATTTCACAGTGG---ATAGAGGAAGCAAGTGGTTTTTCCTAATGCAAATTAGTATTACCACAATGGTA
AAAAATTAGAGCACGAAAAAGTTACCCTGCAGAAGAGAGAATTCACAGTGGTGAGAGGAAGCGAGTGGTCATTTT-----
------------------------------------------------------TCTGATGCAAAATAAAAACAAAGAAG
CAAAAGAAGTAGAGCATGAAAAGGTTATCGGGTAGAAGACACGATTTTATG-----------------------------
------------------GTAGAGGAAGCAATTGGTGATTTTTTTTTAACGCAAATTAACATATTAAAAAAAACTGCATT
TGATAGAGGAAGCAGATGGTAATTCTAATGCAAATTAGTACGTATCAAAACTTACATTACAGGAAGCAATTGGTGAATTT
TTAAATGGAAAGGTAGTGATTCCAGTGCAAATTTATAGTATAGGAAGGACACGAATAGAAAACACAGGATTTCAAAAAAC
AAAGGAATTTGACGGGGTTGCAAATGCAAAACAGAGGATTAGAAAACAGAGAAAAACTGCACGCGCAGTCATTTTTGGAT
GAAACACAGGAAAAATGCCTCAATCCTACACGCGAATCAGTGTAAAAAAGAGGTTTGAGTGGATGTTGAAATTCCTATAG
GATTGAGGTGTAGGAATACGATCCATAGCGAACCAACCTGTGGTTGGATGGTTAAAGAGACAGTGGTATCCCCAGCCCAC
TAGGGTTCAAGTCTTGGTGCTCGCATTATTCCTGAATTTATTTCAGGATTTCCGGCGATGCACTTTCAGTGAGAGGAGAC
GTTCCGATGAGTACTTATAGAGGTGAGTGTGTGCGCGTATGTATGAGCACTTGCATA
>chr6A_1
ACGGCAATTGTGATTCTCTGCTACACGGCAACTGCAGTTACGCGAACGTGGCAACTCGGTACACACA-CATGGCAACTGT
GATTCTTTGCTACACGGCAACTGCAGTTGCGCGTACGTGGCAACCAGATAAACACACATGGCAACTGTGATTAACAATAC
ATGGCAACTATGGTTGGACCACACGTGGTAACTAGGTAAACACACATGGCAACTACTGTTTTGACCATATGTGGCAAGTA
GTTAATCACACACGGCAACTACAATTTGATTACACGCGGCAACTACCATAAATTAGACATGGCAACTATAGTTAACCAAA
ACAG-ATAGAGTTGCCATGCTTTTACAACTACACTTGCCATCCCGAATAACTACATCTGCCAACCAGGATGGCAACTAAA
TAGTCATCCCGCGAGGTACCTAACGTAGCTGCCTCAGGACGTGTGGGCA-TTTTTGCTTCGTGTCACACGCACGGGGTAA
AGATGAGTAGTACTT-GTTGGGCGTGTGGCACGAAGTAGCCGCGCCCACATGTGTGGGCAATTCCAATGTCCGCCCACAC
ACAGCCCGTGTGGGCTGCCTCCTACTCACACCACACGCGGTGTGTGGGCGCATGTCGTATATGCCACACGTGTGGCAGTT
A-------------------------------------------------------------------------------
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>chr6B_1
ACGGCAACTGTGATTCTTTGCTACACGGCAACTGCAGTTACGCGAACGTGGCAACTCGGTACACACA-CATGGCAACTGT
GATCCTTTGCTACGCGGCAACTGTAGTTGCTCGTACGTGGCAAACAGATAAACACACATGGCAACTGTGATTAACAATAC
ATGGCAACTATGGTTGGACCACACGTGGCAACTAGGTAAACACACATGGAAACTACTGTTTTTACCATATATGGCAAGTA
GTTAATCACACACGGCAACTACGGTTTGATTACACGCGGCAACTACCATAAATTAGACATGGCAACTCTAGTTAACCAAA
ACAG-ATAGAGTTGCCATGCTTTTACAACTACACTTGCCATCCCAAATAACTACATCTGCCAACCAGGATGGCAACTAAA
TCGCCATCCCGCGGGGTACCTAACGTAGCTACGTCAGGACGTGTGGGCA-TTTTTGCTTCGTGCCACACGCACGAGATGG
AGAAGAGTAGTACTT-GTTGGGCGTGTGGCACGAAGTAGCCGCGCCCACACGTGTGGGCAATTCCAATGTCTGCCCACAC
ACAACCCGTGTGGGCTGCCTCCTACTCACACCACACACGGTGTGTGGGCGCATGTCGTATATGCCACACGTGTGGCAGTT
AGCGGCGTCCTTAT------------------------------------------------------------------
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>chr2B_3
--GGCAACTGTGATTCTTTGCTACATGGCAACTGCAGTTACGCGAACGTGGCAACTCGGTACACACA-CATGGCAACTGT
GATTCTTTGCTACACGGCAACTGCAGTTGCGCGTACGTGGCAACCAGATAAACACACATGGCAACTGTGATTAACAATAC
ATGGCAATTATGGTTGGACCACACGTGGCAACTAGGTAAACACACATGGCAACTACTGTTTTGATCATATGTGACAAGTA
GTTAATCACACACGGCAACTACGGTTTGATTACACGCGGCAACTACCATAAATTAGACATGGCAACTATAGTTAACCAAA
ACAG-ATAGAGTTGCCATGCTTTTACAACTACACTTGCCATCCCGGATGACTACATCTGCCAACCAGGATGGCAACTAAA
TCGTCATCCCGCGGGGTACCTAACGTAGCTGCGTCAGGACGTGTGGGCA-TTTTTGCTTCGTGCCACACGCACGGGGTGG
AGATGAGTAGTATTT-GTTGGGCGTGTGGCACGAAGTAGCCGCGCCCACACGTGTGTGCAATTCTAATGTCCGCCCACAC
ACAACCCGTGTGGGCTGCCTCCTGCTCACACCACACACGGTGTGT-GGCGCATGTCGTATATGCCACACGTGTGGCAGTT
ATCGGCGTCCTATATTTT--------------------------------------------------------------
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>chr2B_3
--GGCAACTGTGATTCTTTGCTACATGGCAACTACAGTTACGCGAACGTGGCAACTCGGTACACACA-CATGGCAACTAT
GATTCTTTGCTACACGGCAACTGCAGTTGCGCGTACGTGGCAACCAGATAAACACACATTGCAACTGTGATTAACAATAC
ATGGCAATTATGGTTGGACCACACGTGGCAACTAGGTAAACACACATGGCAACTACTGTTTTGACCATATGTGACAAGCA
GTTAATCACACACGGCAACTACGGTTTGATTACACGCGGAAACTACCATAAATTAGACATGGCAACTATAGTTAACCAAA
ACAG-ATAGAGTTGCCATGCTTTTACAACTACACTTGCCATCCCGGATGACTACATCTGCCAACCAGGATGGCAACTAAA
TCGTCATCCCACGAGGTACCTAACGTAGCTGCGTCAGGACGTGTGGGCA-TTTTTGCTTCGTGCCACACGCACGGGGTGG
AGATGAGTAGTATTTTGTTGGGCGTGTGGCACGAAGTAGCCGCGCCCACACGTGTGGGCAATTCTAATGTCCGCCCACAC
ACAGCCCGTGTGGGCTGCCTCCTGCTGACACCACACACGGTGTGTGGGCGCATGTCGTATATGCCACACGTGTGGCAGTT
A-------------------------------------------------------------------------------
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>chr6A_3
--GGCAACTGTGATTCTTTGCTACATGGCAACTGCAGTTACGCGAACGTGGCAACTCGGTACTCACA-CATGGCAACTGT
GATTCTTTGCTACACGGCAACTGCAGTTGCGCGTACGTGGCAACCAGATAAACACACATGGCAACTGTGATTAACAATAC
ATGGCAATTATGGTTGGACCACACGTGGCAACTAGGTAAACACACATGGCAACTACTGTTTTGACCATATGTGACAAGTA
GTTAATCACACACGGCAACTACGGTTTGATTACACGCGGCAACTACCATAAATTAGACATGGCAACTATAGTTAACCAAA
ACAG-ATAGAGTTGCCATGCTTTTACAACTACACTTGCCATCCCGAATGACTACATCTGCCAACCAGGATGGCAACTAAA
TCGTCATCCCGCGGGGTACCTAACGTAGCTGCGTCAGGACGTGTGGGCA-TTTTTGCTTCGTGCCACACGCACGGGGTGG
AGATGAGTAGTATTT-GTTGGGCGTGTGGCACGAAGTAGCCGCGCCCACACGTGTGGGCAATTCTAATGTCCGCCCACAC
ACAACCCATGTGGGCTGCCTCCTGCTCACACCACACACGGTGTGTGGGCGCATGTCGTATATGCCACACGTGTGGCAGTT
A-------------------------------------------------------------------------------
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>chr1A_3
--GGCAACTGTGATTCTTTGCTACATGGCAACTACAGTTACGCGAACGTGGCAACTCGGTACACACA-CATGGCAACTGT
GATTCTTTGCTACACGGCAACTGCAGTTGCGCGTACGTGGCAACCAGATAAACACACATTGCAACTGTGATTAACAATAC
ATGGCAATTATGGTTGGACCACACGTGGCAACTAGGTAAACACACATGGCAACTACTGTTTTGACCATATGTGACAAGTA
GTTAATCACACACGGCAACTACGGTTTGATTACACGCGGAAACTACCATAAATTAGACATGGCAACTATAGCTGACCAAA
ACAG-ATAGAGTTGCCATGCTTTTACAACTACACTTGCCATCCCGGATGACTACATCTGCCAACCAGGATGGCAACTAAA
TCATCATCCCACGGGGTACCTAACGTAGCTGCGTCAGGACGTGTGGGCA-TTTTTGCTTCGTGCCACACGCACGGGGTGG
AGATGAGTAGTATTT-GTTGGGCGTGTGGCACGAAGTAGCCGCGCCCACACGTGTGGGCAATTCTAATGTCCGCCCACAC
ACAGCCCGTGTGGGCTGCCTCCTGCTCACACCACACACGGTGTGTGGGCGCATGTCGTATATGCCACACGTGTGGCAGTT
ATCGGCGTCCTTCTTTTT--------------------------------------------------------------
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>chr5D_3
--GGCAACTGTGATTCTTTGCTACACGGCAACTGCAGTTACGCGAACGTGGCAACTCGGTACACACA-CATGGCAACTGT
GGTTCTTTGCTACACGGCAACTGCAGTTGCGCGTACGTGGCAACCAGATAAACACACATGGCAACTGTGATTAACAATAC
ATGACAACTATGGTTGGACCACACGTGGCAACTAGGTAAACACACATGGCAACTACTGTTTTGACCATATGTGGCAAGTA
GTTAATCACACACGGCAACTACGGTTTGATTACACGCGGCAACTACCATAAATTAGACATGGCAACTATAGTTAACCAAA
ACAG-ATAGAGTTGCCATGCTTTTACAACTACACTTGCCATCCCGGATAACTACATCTGCCAACCAGGATGGCAACTAAA
TAGTCATCCCGCGGGGTACCTAACGTAGCTGCGCCAGGACGTGTGGGCATTTTTTGCTTCGTGCCACACGCACGGGGTGG
AGATGAGTAGTACTT-GTTGGGTGTGTGGCACGAAGTAGCCGCGCCCACACGTGTGGGCAATTCTAATATCCGCCCACAC
ACAGCCCGTATGGGCTGCCTCCTGCTCACACCATACACGGTGTGTGGACGCATGTCGAATATACCACACGTGTGGCAGTT
A-------------------------------------------------------------------------------
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>chr6D_3
--GGCAACTATGATTCTTTGCTACACGGCAACTGCAGTTACGCGAACGTGGCAACTCGGTACACACA-CATGGCAACTGT
GATTCTTTGCTACACGGCAACTGCAGTTACGCGTACGTGGCAACCAGATAAACACACATGGACACTGTGATTAACAATAC
ATGGCAACTATGGTTGGACCACACGTGGCAACTAGGTAAACACACATGGCAACTACTGTTTTGACCATATGTGGCAAGTA
GTTAATCACACACGGCAACTACGGTTTGATTACACGCGGCAACTACCATAAATTAGACATGGCAACTATAGTTAACCAAA
ACAG-ATAGAGTTGTCATGCTTTTACAACTACACTTGCCAACCCAGATAACTACATCTGCCAACCAGAATGGCAACTAAA
TCGTCATCCCGCGGGGTACCTAACGTAGCTGCGTCAGGACGTGTGGGCATTTTT-GCTTCGTGCCATACGCACGGGGTGG
AGATGAGTAGTACTT-GTTGAGCATGTGGCACGAAGTAGCCGCGCCCACACGTGTGGGCAATTCTAATATCCGCCCACAC
ACAGCCCGTGTGGGCTGCCTCCTGCTCACACCACACACGGTGTGTGGGTGCATGTCATATATGCCACACGTGTGGCAGTT
ATCGGCGTCCTTTATTTTT-------------------------------------------------------------
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>chr3A_5
----CAACTGTGATTCTTTGCTACACGGCAACTGCAGTTACGCGAACGTGGCAACTCGGTACACA---CATGGCAACTGT
GATTCTTTGCTACACGGCAACTGCAGTTGCGAGTACGTGGCAACAAGATAAACACACATGGCAACTGTGATTAACAATAC
ATGACAACTATGGTTGGACCACACGTGGCAACTAGGTAAACACACATGGCAATTACTGTTTTGACCATATGTGGCAAATA
GTTAATCACACACGGCAACTACGGTTTGATTACACATGTCAACTACCATAAATTAGACATGACAACTATAGTTAACCAAA
ACAG-ATAGAGTTGCCATGCTTTTACAACTACACTTGCCATCCCAGATAACTACATCTGCCAACCAGGATGGCAACTAAA
TCGTCATCCCGTGGGGTACCTAACGTAGCTGCGTCAGGACGTGTGAGCA-TTTTTGCTTCGTGCCACACGCATGGGGTGG
AGATGAGTAGTACTT-GTTGGGCGTGTGGCACGAAGTAGCCGCGCCCACACGTGTGGGCAATTCTAATGTCCGCCCACAC
ACAGCCCGTGTGGGCTGCCTCTTGCTCATACCACATACGGTGTGTGGGCGCATATCGTATATGCCACACGTGTGGCAGTT
ATCGGCGTCCTTTTTTT---------------------------------------------------------------
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>chr2A_822
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-----------------------CCTGTTTCTCCCGCCTCTACTGCTGCTGGATCTCCTTCCCCTCCCCCGACCACCGTC
CCCCGCGTCCTCCTCCGACTCCA---GCCGCCGCCGGCGCAGCCTACCTCCCCTGCCCCGGAATGGACGCCGAGACGGGG
CCGGGGGCGGTGACGACGGCGGCCCACCGCCCCCCGCAGCCGCGGACGCCCTACGCCGACGCGGACCGCACCCTCCGCGC
GCTCGCCGCCGCCGCCGAGGGCTTCGGCCGCCGCGCCATCGGGGGCCTCCACGGCGCCCTCTACCACGTCACCTCCCTCC
AAGGTCCCCCCTTTTTTACCCGCCTTCAATCTCGCTCCGGAACTCTGTCAACAGGA------------------------
----ACCGACCGATTGATC--------CGCAGACGACGGGCACGGGACGCTGCGGGAGGCGTGCCGGGCCAAGGAGCCGC
TGTGGGTCGTCTTCGAGGTCTCCGGCGACATCCACCTCCACACCTACCTGCGGGTCTCCTCCCACAAGACCATCGACGGG
CGCGGGCAGCGGGTCCGGCTCACCGGCAAGGGGCTCCAGCTCAAGGACTGCCACCACGTCATCGTCTGCAACCTCCAGTT
CGAGGCCGGCCGGGGCCACGACGTCGACGGCATCCAGATCAAGCCCGGCTCTACCAACATCTGGATCGACCGCTGCTCCC
TCGCCGACTACGACGACGGGCTCATCGACATCACGCGCCAGAGCACCGACATCACCGTCTCCAGGTACTAGTAGTTCCTT
TTTTTTACTGCCCCTCCT--CA--------------------------------------CCAACTAAATTTCTGTGTAC
AAACATGACGCAATCCAACTAAATTTTTGTGTGCAGCATCACGCATCTTCAGTTCTTCACTCATTTCGTTTGATAATTGT
AGTGCTGATGAACATGTGCCTGTATGTGACTGCATTTTTGCACAGATGCCACTTTGCAAGGCATGACAAGACGATGCTCA
TCGGCGCGGACCCAAAGCACGTCGATGACAGGTGCATCAGGGTGACCATCCACCACTGCTTCTTCGACGGCACGCGGCAG
AGGCACCCGCGCCTGCGCTTCGGCAAGGTCCACCTCTACAACAACTACACCAGGGACTGGGGCATCTACGCCGTCTGCGC
CGGCGTCGAAGCTCAGGTGACTCATTTCATCCGGCATCCGCTATTCCAAATGCTTGCAACTGGCAACACTTACTTGGAGA
TCATCAAATCTAAATGGAATG----ATGTCTCCGTTTGCAGATTGTGTCTCAGTGCAACATATACGAAGGAGGACATAAG
AAGACGGTCTTCAAGTACATGCCAGAGAAGGTACCTGCATTCAGAGTTTCAGTCTTTCAGACA-----AG---ATGAGAC
TCAGCATTTGCATACATCCTAGTCACAGAGATGAGATGAGCTGACTACATAGCTGAATGCTGCTGCAGGCTGCTGACAGA
GAAGAGACGGCGGCCGGGTGGATCAGGTCGGAGGGCGACGCGTTCCTGCACGGGGCGTTGCCGTGCCTGGTCGACGGCCC
GGGCGCCGAGTGCGTCTTCAGGCCGGAGGAGTACTACGACAGGTGGACGATGGAGGCGGCGTCGCCGGCGCTCAAGGAGG
TCATTCAGCTCTGCGCTGGGTGGCAGCCTGTGCCCAGGCCTCCGGACTGCTAGCGCTGTAAATCATGGAAGTTCAGGTTC
AGGGTTCAGACCCGAGAACTGCAAGCCTGATCGACCATTGGTTCGTTCAAGTAAAATTGTT-TGAGCTTCGGTTCAGTAG
TCCCCTGCTAGAATTGTAATAAACTCTTAGCGTGTGATACGATTGATCTTCAACGATTAGAGAGCATGGAACAGTTGTCG
CGTAGAGGAGAGAATT--CAGTGG---ATAGAGGAAGTGACTGCTGGTT-CTGATGCAAATTATTAATAGAAATGGAG--
-AAAATTAGAGCACGAAAAAGTTATTCTGCAGAAAAGAGAATTCATGGTTGTGAGAGGAAGCAAGCAGTCATTTCTAATG
CAGATTATTAACAAGAATTAATAGAA------------------------------------------------------
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>chr2D_822
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-----------------------CCTGTTTCTCCCGCCTCTGCTGTTGCTGGATCTCCTTCCCCTCCCCCGACCCCCGGC
CCCCGCGTCCTCCTCCGACTCCAGCCGCCGCCGCCGCCGCAGCCTACCTCCCCTGCCCCGGCATGGACGCCGAGACGGGG
CCGGGGACGGTGACGACGGAGGCCCACCGCCCCCCGCAGCCGCGGACGCCCTACGCCGATGCGGACCGCACCCTCCGCGC
CCTCGCCGCCGCCGCCGAGGGCTTCGGCCGCCGCGCCATCGGGGGCCTCCACGGCGCCCTCTACCACGTCACCTCCCTCC
AAGGTCTCCTCTTTCCC-CACCCTTCCACTGTCCCTCCGCAATTCCATTACCACTTGGGGGATGATGAATCCATGAACTG
ACCGACCGACCGATTCGT-----GGCGCGCAGACGACGGGCACGGGACGCTGCGGGAGGCGTGCCGGGCCAAGGAGCCGC
TGTGGATCGTCTTCGAGGTGTCCGGCGACATCCACCTCCACACCTACCTCCGGGTCTCCTCCCACAAGACCATCGACGGG
CGGGGCCAGCGGGTCCGGCTCACCGGCAAGGGGCTCCAGCTCAAGGACTGCCACCACGTCATCGTCTGCAACCTCCAGTT
CGAGGCTGGCCGGGGCCACGACGTCGACGGCATCCAGATCAAGCCCGGCTCCACCAACATCTGGATCGACCGCTGCTCCC
TCGCCGACTACGACGACGGCCTCATCGACATCACCCGCCAGAGCACCGACATCACCGTCTCCAGGTA------GTTCCTT
TTTTTTACCGCCCCTCCTAACACCAACTAGAG---------------------------------TAAATTTCTGTGTAC
AACATCACGCA---------------------------------ATCTTCAGTTCTCCACTAATTTCCTTTGACAATTGT
---GCTGATGAACATGTGCCTGTATGTGACTGCATTTTTGCACAGATGCCACTTTGCAAGGCATGACAAGACGATGCTCA
TCGGCGCGGACCCGACGCACGTCGACGACAGGTGCATCAGGGTGACCATCCACCATTGCTTCTTCGACGGCACGCGGCAG
AGGCACCCGCGCCTGCGCTTCGGCAAGGTCCACCTCTACAACAACTACACCAGGGACTGGGGCATATACGCCGTCTGCGC
CGGTGTCGAAGCTCAGGTGGCTCATTTCAATGCA------CTGTTCCAAATGCTTGCAACCGGCAACACTTACTTGGAGA
TCATCAGTTTCTAATGAATCAGTCAATACCTCCATTTGCAGATTGTGTCCCAGTGCAACATATACGAAGGAGGGCATAAG
AAGACGGTCTTCAAGTACATGCCGGAGAAGGTATACCTGCATC------------TTCAGACAAGATGAT---ACGAGGC
TGAGCATTTGCATACATCTTGGTTACAGATACTGA------------------TGAATGCTGCTGCAGGCTGCTGACAGA
GAAGAGACGGTGGCTGGGTGGATCCGGTCGGAGGGCGACGCGTTCCTGCATGGGGCGCTGCCGTGCCTGGTCGACGGTCC
GGGTGCCGAGTGCGTCTTCAGGCCGGAGGAGTACTACGACAGGTGGACGATGGAGGCGGCGTCGCCGGCTCTCAAGGAGG
TCATTCAGCTCTGCGCTGGGTGGCAGCCTGTGCCCAGGCCCCCAGACTGCTAGCGCTGTAAATCATGGAAGTTCAGGTTC
AGAGTTCAGACCCGAGAACTGCAAGCCTGATCGGCCATTGATTCATTCAAGTAAAAGTGTT-TGAGCTTCTATTCAGTAG
TTCTCTGCTAGAATTGTAATAAGCGATTAGCGTGTGATACGATTGATCTTCAACGATTAGAGAGCATGGAACAGTTGTCG
CGTAGAGGTCAGAATT--TAGTGGATAATAGAGGAAGTGACTGCTGATT-CTGATGCAAATTATTAAGAACAATGGAG--
-AAAATTAGAGCATGAAAAAGTTATTCTGCAGAAGAGAGAATTCACAGTGGTGAGAGGAAGCAAGCAGTCATTTCTAATG
CAGATTATTAACATAAATTAATAGAATTCACAGTAGAGGGATTGAGTGGTGATCTCTAATACAAATCAATAACAAAAAAA
CAGTGTGAACTAAAAAACAGACAATTTGCAGTAGAGGGATTAAGAGGTGGTTTCTAATGGAAATGTTAGCATTGGCTACA
AAAATAATTGCGACCACAGTAGAGGAATTAAGTGGTGATT----------------------------------------
-----------------------TCTAATGCAAATCAAT-----------------------------------------
-----------------------------------------------------AACAGAAAAAACAGAGCATGAAAAAAA
AAGAGAATTTGCAGAGAGTAAGAGGTGATTTCTAATGGTGGTGA------------------------------------
---------------------------AAACGTTAATCTGTAGAAGAGAGAATTCACAGTGGTGAGAGGGAGCAACTGGT
CATTT---------------------------------------------------------------------------
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>chr2B_822
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-----------------------CCTGTTTCTCCCGCCTCTGCTGCTGCTGGATCTCCTTCCCCTCCTCCGACCCCCGTC
CCCCGCGTCCTCCTCCGACTCC---CGCCGCCGCCGCCGCAGCCTACCTCCCCTGCCCCGGCATGGACGCCGAGACGGGG
CCTGGGACGGTGACGACGGCGGCCCGCCGCCCCCCGCAGCCGCGGACGCCCTACGCCGACGCGGACCGCACCCTCCGCGC
GCTCGCCGCCGCCGCCGAGGGCTTCGGCCGCCGCGCCATCGGGGGCCTCCACGGCGCCCTCTACCACGTCACCTCCCTCC
AAGGTCCCCC--TTTTTACCCGCCTTCAATCTTGCTCCGGAACCCTGT---CAGGA------------------------
----ACTGACCGATTGATCGATCGGCGCGCAGACGACGGGCACGGGACGCTGCGGGAGGCGTGCCGGGCCAAGGAGCCGC
TGTGGATCGTCTTCGAGGTGTCCGGCGACATCCACCTCCACACCTACCTCCGGGTCTCCTCCCACAAGACCATCGACGGG
CGGGGGCAGCGAGTCAGGCTCACCGGCAAGGGCCTCCAGCTCAAGGACTGCCACCACGTCATCGTCTGCAACCTCCAGTT
CGAGGCCGGCCGGGGCCACGACGTCGACGGCATCCAGATCAAGCCCGGCTCCACCAACATCTGGATCGACCGCTGCTCCC
TCGCCGACTACGACGACGGCCTCATCGACATCACGCGCCAGAGCACCGACATCACCGTCTCCAGGTCCT-----TCCCTC
TTTTCTACTGCTCCTCCTCACACCAACTAGAGTAAATTTCTGTGTACAACATGACGCAATCCAACTAAATTTCTGTGTGC
AACATCACGCA---------------------------------ATCTTCAGTTCTTGACTCATTTCATTTGACAATTGT
---GCTGATAACTATATGCCTGTGTGTCAATTG--TTTTGCACAGATGCCACTTTGCAAGGCATGACAAGACGATGCTCA
TCGGCGCGGACCCGACGCACGTCGACGACAGGTGCATCAGGGTGACCATCCACCACTGCTTCTTCGACGGCACGCGGCAG
AGGCACCCGCGCCTGCGCTTCGGCAAGGTCCACCTATACAACAACTACACCAGGGACTGGGGCATATACGCCGTCTGCGC
CGGCGTCGAAGCTCAGGTGGCCCATTTCATCCGGCATCTGCTGTTCCAAATGCTTGCAACCGGCAACACTCACTCGGAGA
TGATCAATTTCTAATGAAATG----ATGCCTCCATTTGCAGATTGTGTCCCAGTGTAACATATACGAAGGTGGGCACAAG
AAGACGGTCTTCAAGTACATGCCGGAGAAGGTACT-CTGCATC------------TTCAGACAAGATGATGCTATGAGGC
TGAGCATTTGCATACATCCTGGTTACAGATACTGA------------------TGAATGCTGCTGCAGGCTGCCGACAGA
GAAGAGACGGCGGCCGGGTGGATCAGGTCGGAGGGCGACGCGTTCCTGCACGGTGCGCTGCCGTGCCTGGTCGACGGCCC
GGGCGCCGAGTGCGTCTTCAGGCCGGAGGAGTACTACGACAGGTGGACGATGGAGGCGGCGTCGCCGGCGCTCAAGGAGG
TCATTCAGCTCTGCGCTGGGTGGCAGCCTGTGCCCAGGCCCCCGGACTGCTAGCGCTGTGACTCATGGAAGTTCAGGTTC
AGGTCCGG---CCAACAACTGCAAACCTGATCGGCCATTGGGTCATCAAAGTAAAAAAAAAATGAGCTTCTATTCAGTAG
TCCTATGCTAGAATTGTAATAAACTCTTAGCGTGTGATACAGTTGATCTTGAGTGATTAGAG--GATGAAACTGTTATTC
TTTAGAAGAGAGGATTTACAGGTG---GATGGGGAAGCAAGTGGTTATT-------------------------------
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>SNPs
---------------------S---------------------------------------------S------------
S-------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
------------S---------------------------------S------------S----------S---------
----S------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
-S-SS----S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS-------------------------------S-------------------------
S-----------------------------------------------------------S-----------------S-
----------------------------------------------S---------------------------------
-------------------------------------------------------S------------------------
----------S-----------------S-S----------S--------------------------------------
-----S--S---------S---S--------------------------S----------------S-------------
----------------------------------------------------S---------------------------
----------------------------------------------SS--------------------------------
------------S--S----------------------------------------------------------------
-------------------------------------S------------------------------------------
----------S-------S-------------------------------------------------------------
----------S---------------------------------------------------------------------
------------------------------S-SSS-SS---------------------S--------------------
-S--------------S-----------------------------------------------S---------------
------------------------------------------------------------------------------S-
-------------S---------------------------------S--------------------------------
------------S---------------------------------S---------------------------------
--------------------------------------------------------------------------------
--S----------------S----SSSSSSSS------------------------------------------------
--------------------------------------------------------------------------S-----
------S----SS-----------------------S-------------------------------------------
--------------------S---------------------------------S-------------------------
------------------------------S----SSS-SSS-S-S-SS-----------------S--S--S--SS-SS
---------S---------------------S---------------------------------------------S--
---S---------S--S-----------------------------S--S--S----------S--S--S--SSSSS-SS
S-----------------------SS------------------------------------S--SS-------S-----
---------------------------------------------------------S--S----SS--S------S--S
--SSSSS-SSSS-SS-SS-S-SSS--SS-S-SSSSSS--SSSSSSSS-SSS-----------------------------
---------------------------SS--S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS------------S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S------S----SSSS-S------S
--SS-------SS-S-SS-SSS-SSSS-SSS-SS-S-S-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-S---SS----S--SS--S-S---SS-SSS-----SSSSS-SS-SSSSSSSSS
S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_783
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-------------------------------------------TTGAGTACGGACCGCTTACG-----------------
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>reverse_2591
--------------------------------------------------------------------------------
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------------------------------ACGACTGATCCATTGGCGTA------------------------------
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