>input_sequence_52895
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ATGTTGGCCGCATC
CATGCTCACCACCGTCTTCTCCCCTCTCGCCCTCCTCCGCCCGACGGCCTCCTTCGCGCGCCTGCGCCGCGCGGCTCCCG
CCGC---CGCCGTCGTCGTGCGCGCCGCGGCCAAGTCCACGGCCGCGGCCGCGGCGGCCCCCAAGAAGAAGAGGGCGGCG
CCGACCGGCATCACGATGCCCCGGCCCGTCTCCCCGGCGCTGCAGGCGTTCATGGGCGCCGCCGAGGTCCCCCGCACCGA
GGCCATGAAGCGCATCTGGGCCTACATCAAGCAGAACAACCTCCAGGTACGC-----CCCACGCGAGCCCCCCCAAACCC
TAGGCGTCCCG----TTGCCAGGTTGTTCGTTTGGCCTAGTACTAGTTGATTTGGATGTGAAAGATGAAGTCGGGATGGA
-TGCGTAAGATGAGATGGAATCGCTTGGCG-TTTTGCTAGTGTCGAGCAGGAGCAAATCTGAGATTTTGCGTTCAGGACA
GGTGTAAACTGTTGT---------------TGGCGTTTTGCTCTGGAGGCGCCTCACTGTCCATGCCCGCCAGATGTAGA
AGCCCGGTGTATAATGAGGACGTCGCTTGCATTTTT--------------------------------------------
-------------------------------------------------------------AGTAACTCTACTTCTTAGA
ACGTCCCGTCGTGTTTCTGTCTTGCTGATATGCAGCGTTGGGTACTTCTGCTGATGCATGTGGAATGTTCTCACTCTTGT
CTGATCCCAGTGTAAATTGATTTGTTTTTTCTATCTGCTTGTGTTAAGAACATATGATTTGATGCCACATTTTGCTGTTA
TGTGTTGCACATCGGTTAGC------------------------------------------------------------
-------------------------------------------------------ACTTAGCAGAGTCTACGAAAGATGG
TCCCATGAGAAGGAGCTGTGATGCTTCCAATGTGATAAA-CTGACTGATGATAAGTCTGAAACAGAGGTTTTTCTCATGT
GGCATTTGTAAACACGTTGAAATCCTTGCTGAACAGAGTTAATTTCTAGATTCAATGTGGCCGGATTGCTTGCATTGTGC
AATTACTGAATGGCGGTATGCTTGCAGAATATATATGTAGTGACTAGTGAATGAAGAGTGCATGGTTGATTTGATGAAGT
ATTTATGTTCAAAC-----TTCAGACACATTAAGTTACTCGTCATACAACTATTTGAGTGTGAAGTGTATGAGCTTTTCA
TTCTTTGGTGTGAAGTGATGTCACAAATGTGAAATCTTGCAGTAAATGTAGGATTTGCAACAACATACAAGGACTTAAC-
--------------------------------------------------------------------------------
--TAAGTATGTACATAGGAACATGCTATTTTCCAGTTGCACTTCTCATTCTGTCCTGCTATTTTCCAGGACCCTGCGGAC
AAGAAGGTCATCGTGTGCGACGAGAAGCTGAAAGCCCTGTTTGCGGGCAGAGAGCGTGTTGGGTTCCTGGAGATTGCCAA
GCTTCTGAGCCTGCACTTTGTCAAGACTCCGTGA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr5A_1_TraesCS5A01G398800
CCTACTGCGGCCGTCGGCGTGCCCGTGGGTTCTCTCCCCCTCCGCCGGTCGCTCCGGCGATGGGAGGGTGGGGGAACCCC
GGGTCTTAGATCTTTTTTGGGGAGGTTGCGTTTGTTTGTTCTCGTGGATCTCCACATCAGGTGAGTTCTTCGTTCCTCCT
GGCGGTCGGCGTGGCTGCTCTTTGTCGAGCAGTTTTTTTTCTTTCGTCTCTTTTTTATCCCTGCCTTTTCGGTCTTTTTT
CTCATTTTTTCTTCATTTTTCTTTTGTTT----------ATTTTTTTGGTTTTCTTTGTTATTTTGGTTATTATTCTACA
TATTTTTGTATATGTCAACAACATTTCCCGAGTGCACATCTAACATTTTTTCAATACAAATCAAACATTTTTTGTAATGC
ATGGTCAACCTTTTTCATATACACATTTTAAATATTTTTCAAATTCTGGATTAACATTATACAAAATTAACATTTTAATG
CATTACCAATATTTTTTATACATTTTAA---------TAAATGCTTGGTCGACATTTTTCAAATAAAACAATTAAGAATT
TTTGAATAAAATAATTAAGAATTTTCCAATACATTGTCAAAAAACTTTTTATAAACATTTAAATTTTTTCAAGCGCTCAA
ATAACACTTGTCAAACACTTTTTCAATATTTATTAAATGCTTGATTAACATTTAAAAAA---------------------
TATTATATATATGTATATATAATATTTTTAAAATATAAAAAGGTTCAAAATAAATATGAGACGAAAAGAGTAAACAGG--
---------AAAAAAAACAAAATAGGCTGTGACCTGCCGCACGCATGGGTCGGTCCATCTCGCTCGCCCCTTCAGCGAGT
CGGAAGCT------------GGCGAGATATAGAGGCGCTCGTTGGAGATGCCCTAAACCCCCCTCTAAAAT-ATAAAATA
AAAGTGGAGATGC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CCTAAACCCTCAAAAGCCCAAACCCTTGTTCC
CCACAGCCATTATCCAAAGAGACCCCGACGCCGAAGCGACCGAAGAGAGGA-------AACCCCAAATGTTGGCCGCATC
CATGCTCACCACCGTCTTCTCCCCTCTCGCCCTCCTCCGCCCGACGGCCTCCTTCGCGCGCCTGCGCCGCGCGGCTCCCG
CCGC---CGCCGTCGTCGTGCGCGCCGCGGCCAAGTCCACGGCCGCGGCCGCGGCGGCCCCCAAGAAGAAGAGGGCGGCG
CCGACCGGCATCACGATGCCCCGGCCCGTCTCCCCGGCGCTGCAGGCGTTCATGGGCGCCGCCGAGGTCCCCCGCACCGA
GGCCATGAAGCGCATCTGGGCCTACATCAAGCAGAACAACCTCCAGGTACGC-----CCCACGCGAGCCCCCCCAAACCC
TAGGCGTCCCG----TTGCCAGGTTGTTCGTTTGGCCTAGTACTAGTTGATTTGGATGTGAAAGATGAAGTCGGGATGGA
-TGCGTAAGATGAGATGGAATCGCTTGGCG-TTTTGCTAGTGTCGAGCAGGAGCAAATCTGAGATTTTGCGTTCAGGACA
GGTGTAAACTGTTGT---------------TGGCGTTTTGCTCTGGAGGCGCCTCACTGTCCATGCCCGCCAGATGTAGA
AGCCCGGTGTATAATGAGGACGTCGCTTGCATTTTT--------------------------------------------
-------------------------------------------------------------AGTAACTCTACTTCTTAGA
ACGTCCCGTCGTGTTTCTGTCTTGCTGATATGCAGCGTTGGGTACTTCTGCTGATGCATGTGGAATGTTCTCACTCTTGT
CTGATCCCAGTGTAAATTGATTTGTTTTTTCTATCTGCTTGTGTTAAGAACATATGATTTGATGCCACATTTTGCTGTTA
TGTGTTGCACATCGGTTAGC------------------------------------------------------------
-------------------------------------------------------ACTTAGCAGAGTCTACGAAAGATGG
TCCCATGAGAAGGAGCTGTGATGCTTCCAATGTGATAAA-CTGACTGATGATAAGTCTGAAACAGAGGTTTTTCTCATGT
GGCATTTGTAAACACGTTGAAATCCTTGCTGAACAGAGTTAATTTCTAGATTCAATGTGGCCGGATTGCTTGCATTGTGC
AATTACTGAATGGCGGTATGCTTGCAGAATATATATGTAGTGACTAGTGAATGAAGAGTGCATGGTTGATTTGATGAAGT
ATTTATGTTCAAAC-----TTCAGACACATTAAGTTACTCGTCATACAACTATTTGAGTGTGAAGTGTATGAGCTTTTCA
TTCTTTGGTGTGAAGTGATGTCACAAATGTGAAATCTTGCAGTAAATGTAGGATTTGCAACAACATACAAGGACTTAAC-
--------------------------------------------------------------------------------
--TAAGTATGTACATAGGAACATGCTATTTTCCAGTTGCACTTCTCATTCTGTCCTGCTATTTTCCAGGACCCTGCGGAC
AAGAAGGTCATCGTGTGCGACGAGAAGCTGAAAGCCCTGTTTGCGGGCAGAGAGCGTGTTGGGTTCCTGGAGATTGCCAA
GCTTCTGAGCCTGCACTTTGTCAAGACTCCGTGAAGCCTCTTCCATGGAGCACTCGAGTTAGTGTAGATGGTTTCTACTT
TCTGGTGGTCTTGAGGGTGCGTAGGTTTGTCTTGTTGGCCCGAGTTGGCTC-GACTTCTAGGGTTCTTTAGCTCTCTGCG
GACAATGTTAGTTTACCCCTGGCAGTATCAATCTGGAACATCTTAACAGCTTTAAGCTCGTATGCTTGCAGACTCGGTTT
GTGTATGAATAGCAAGTGGTGTGGTGTGGAATCTAAGCGTGGCACACCTGTGGCTGGTGTGAGGGCTTGGAATGCAGAGT
TCACTGCCCCATTCGTGACTGGCAAATCCACTAAAACTGAGCACACAATATATTCAGACAGGCAGAGATTGTCCAATTTG
CGCTCG-----------------CCTCAGCCATGTTTCATTGAGGCCGATCATTCAGAGACACGATGGACATGAAGCTGT
GCCG-------------------------------------------------------GCCTCAAATGAGACCGGAGGA
TGCTCTGGTAGTTGGGTGGAAGGCACACCGCAGTGTATGCGACGCATTAGCTACATCTGAGGGTGGACGGAGGCTTGGGA
GTGCAGTCGCTAGTCGGGCCTTCTTCTTCAACTCTGGTTAGTTTT-CTCTTTGCTCTGATCAATGCGCGCGGCGAGTTTC
CTGTTAGTTCCTCGAGCCAGCACGCACCCCTCTGCCTGCCTTTTCTTCTTCTTCCCT---TCAGTTTGGCGTTTCCACCA
TCCTGGCACCATTGCCAAGATCAACCTGATGGCTGCCG---GGGCTCCAGACCACCACCAGCTAGAATGATCTCACTACA
TGTGATCTTTTGAATTATTAGACAGTACAAAATGTGGATACATGGCATTGTTAGATTCATTAGACA--GTACAGTATGGA
GGTGGGCCCCCCCGCAAAAAAAAGAGGTATGGAGGTGAGGCCTTAACGGTACAAATAGACACAGGCACCAAGAGTGCCTT
TATACTAGCTCCGGCACACACTTGAGCTGTTTCTCGTACTTTTGCGTAGTCCATGTACCCCCTCCAGCAGACAGCT
>chr5B_245
TTTTT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TCTTTTGTTTATGTTGTTACATTTTTCTGGTTTTCTTTGTT-TTTTGGTTAGTATTCTACA
T-TTTTTGTACATGCCAACAACATTTTTCTAGTACACGTCTATCATTTTTCCAATGCAAATCAAACATTT-TTGTAATAC
ATGGTTAAGATTTTTCCTATACATATTTTTAACATTTTTCAAATACAGAAGTAACAAT--------------TTCTAATA
CATTGTCAACATTTTTTATACATTTTAAACATATTTTTAAATGCTTGATTAGCAATTTTCAAATAAAA------------
-------------AATAACAATTTGCGAATACATGATCAACATTTTTTCTGTATACATGTAACATTTTCCAAACGCTTGA
TTAACATTTTTCAAACACTTGTTCAACATTTTTTAAATGCTTGATTAACATTTTTCTAATATTTTTTGTAGAGTGTTTTT
TGTAATATATATATATTTAGACTATTT-----------AAAAGTATAAAAACAAAATAAATAGAAAAATGGAAACAGTAA
ACAGAAAATAAAAGAAAAAAAACAGGCTGTGACCTGCCGCGTGCATGAGCTGG-CCATCTCGCTCGCCCCTTCAGCGAGT
CGGAAGTTGGATTCGCTGAGGGCGAGATATAGAGGCGCCCGTTGGAGAGGCCCTAAACTCGCCTCT----AAATAAAATA
AACATGGAGATGCCCTAATGAGGAGGAGGAGGTTAGCCTTGATGGCCAGGTGGTACCTCGGAAGGACACCTTTCGGTATT
TGGGGTCAATGTTGCAGGAGGATGGGGGTATTGATGAAGATGTGAACCATCGAATCAAAGCCGGATGGATGAAGTGGCGC
TAAGCTTCTGGCATTCTCTGTGACAAGAGAGTGCCACAAAAGCTAAAAGGCAAGTTCTACAGGACGGCGGTTCGACCCGC
AATGTTGTATGGCGCGGAGTGTTGGCCGACTAAAAGGCGACATGTTCAACAGTTAGGTGTGGCGGAGATGCGTATGTTGA
GATGGATGTGTGGCCACACGAGGAAGGATCGAGTCCGGAATGATGATATACGAGATAGAGTTGGGGTAGCACCAATTGAG
GAGAAGCTTGTTCAACATCGTTTGAGATGGTTTGGGCATATTCAGCGCAGACCTCCAGAAGCTCCAGTGCATAGCGGACG
GCTAAAGCGTGCGGAGAATGTCAAGAGAGGGCGGGGTCGACCGATTTTGACATGGGAGGAATCCGTTAAGAGAGACCTGA
ATGATTGGAGTATCGACAAAGAGCTAGCTATGGACAGGGGTGCGTGGAAGCTTGCTATCCATGTGCCAGAGCCATGAGTT
GGTTGCGAAATCTTATGAGTTTCACCTCTAGCCTACCCTAACTTGTTTGGGACTAAAGGCTTTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTATGGAGATGCCCTAAACCCTCAAAAGCCCAAACCCTTGTTCC
CCACAGCCATTATCCAAAGAGACCCCGACGCCGAAGCGACCCAAGAGAAGAAACCCCCAACCCCAAATGGCGGCCGCATC
CATGCTCACCACCGTCTTCTCCCCTCTCGCCCTCCTCCGCCCGTCGGCCTCCTTCGCGCGCCTGCGCCGCGCGGCTCCCG
CCGCCGCCGCCGTCGTCGTGCGCGCCGCGGCCAAGTCTACCA---CGGCCGCGGCGGCCCCCAAGAAGAAGAGGGCGGCG
CCGACCGGCATCACGATGCCCCGGCCCGTGTCCCCCGCGCTGCAGGCGTTCATGGGCGCCGCCGAGGTCCCCCGCACCGA
GGCCATGAAGCGCATCTGGGCCTACATCAAGCAGAACAACCTCCAGGTATACCCACGCCCACGCGAGCTCCCCAAACCCC
TAGGTATCCCTTCCCTTGCCAGGCTGTTCGTTTGGCGTAGTAGTAATTGATTTGGATGTGAAAGACGAAGTCGGAAAGGA
TTGCGTAAGATGAGATGGAATCGCTCGGCCTTTTTGCTAGTGTCCAACAGGAGCAAATCTGAGATCCTGCCTTCAGGACA
GGTGTAAAACTGTTGTTGGCGTTCGTTATGTGGCGTTGTGCTCTAGAGCCGCCTCACTGTCCATGTTCGCCGGATGTAGA
AGCCCGGTGTATAAC-----------------------------------------------------------------
-------------------------------------------------------------------TCTACTTCTTAGA
ACGTCCCGTCATGTTTCCGTCTTGCTGGTATGCAGCGTTGGGTTCTTCTGCTGATGCATGTGGAATGTTCTTGCTCTTGT
CTGATCCCTGTGCAAATTGATGTGTTCTTTCTATCTGCTTGTGGGAAGAACAGATGATTTGCTGCCACGTTTTGCTGGTA
TGTGTTGCACATCGGTTAGT------------------------------------------------------------
-------------------------------------------------------ACTTAGCAGAGTCTATGAAAGATGG
TCCCATGAGAAGGAGCTGTGATGCTTCCAATGTGATAAAACTGACTGATGAAT-GTCTGAAACAGAGTTTTTTCTCATGT
GGCATTTGTACACATGTTGACATCCTTGCTGAACAGAGTTAATTTCTAGATTCAATGTGGC--------------TGTGC
AATTACTGAATGGTGGTATGCTTGCACAATATATA--TAGTGACTAGTGAATGAAGAGTGCATGGTTGATTTGATGAGGA
TGACTTGCCTCCTT--ATGTTCAAACGCATTAAGCTACTCGTCATACAACTATTTGGGTGAAGC----ATGAGATTTTCG
TTCATTGGTGTGGAGTGATGTCACAAATGTGAAATCTAGCAGTAAATGTAGGATTTGCAGCAACATACAAGGACTTAACT
ACTCCCTCCATCCCATAATATAAGATCGTTTTTCAAGCTATGTTAGCTTGAGAAACGGTCTTATATTGTGGGACAAAGGG
AGTAAGTATCTACATACGAACATGCTATTTTGTAGTTGCACTTCTCATTCTGTCCTGCTATTTTCCAGGACCCTGGGGAC
AAGAAGGTCATCGTGTGCGACGAGAAGCTGAAAGCCCTGTTTGCAGGCAGAGAGCGTGTTGGGTTCCTGGAGATTGCCAA
GCTTCTGAGCCCGCACTTTGTCAAGACTCCGTGAAGCCTCTTCCATGGAGTAGTCGAGTTAGCGTAGATGGTTTCTACTT
TGTGGTGGTCTTGAGGGTGCGTAGGTTTGTCTTGTTGGCCCGAGTTGGCTC-GACTTCTAGGGTTCTTTAGCCCTCTGTG
GACAATGTTAGGGTACCTCTGGCAGTAGAAATCTGGAACATCTTGACAGCTTTAAGCTCGTATGCTTGCAGACTCGGTTT
GTGTTTGAATAGCAAGTGGTGTGGTCTGGAATCTAAGCGTGGCATACCAGTGGCTGGTGTGAGGGCTTGGAATGCAGAGT
TCACTGCCCCATTCGTGACTGGCAAATCCACC-AAACTGAGCACACGCAGTATTCAGACGGGCAGAGATTGTCCAATATG
CACTCGCGTTCGCTGTTCTGCGCCCTCAGCCGTGTTTCACTGAGGCCGATCATTCCA-----------------------
---------------CTCATACCCCCTTCCAACATGGCAATGGTCCGCCGAGCTGCCATGCCTCAAATGAGACCAGAGGA
TGCTCTGGTAGGTGCGAGGAAGGCGAACTGCAGCTTATGCGATGTG--------ATCTGAGGGTAGACAGACGCTTGGGA
GTGCAGTCGATAGTCAGGC---CTTCTTCAACTCTGGTCAGTTTTTCTCTTTGCTCTGATCAATGCGCGCGGCGAGTTTC
CTGTTAATTCCTCGAGACAACACGCGCCCCTCTGCCGGCCTTTTCTT---TTTCCCTCGAACAGTTTGGCGTTTCCACCA
TCCTGGCACCATTGCCAAGATCAACCTGATGATGGCCGCCTGGGATCCAAACCACCACCAGCTAGAATGATCCTACTACA
TGCTAT-TTTTAAATTATTAGGCAGCACAAAATGTGGACACAAGGCATTATTAGATTTATTAGATATGGTACAGTACGTA
GGTG----------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr5D_763
AAAAAAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------ATAGGCCGTGACCTGCCGCGCGCGTGGGCCGACCCATCTCGTTCGCTCGTTCAGCGAGT
CGGAAGCTGGATTCCTCAA-GGCGAGATATAGAGGCGCCCGTTGGAGATGCCCTAAATTCCCCTCTTGTAAAATAAAATA
AAAATGGAGATGC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CCTAAACCCTCAAAAGCCCAAACCCTTGTTCC
CCACAGCCATTATCCAAAGAGACCCCGACGCGGAAGCGACCCAAGAGAAGAAAC------CCCCAAATGGCGGCCGCATC
CATGCTCACCACCGTCTTCTCCCCTCTCGCCCTCCTCCGCCCGTCGGCCTCCTTCGCGCGCCTGCGCCGCGCGGCTCCCG
CCGC---CGCCGTCGCCGTGCGCGCCGCGGCCAAGTCTACCA---CGGCCGCGGCGGCCCCCAAGAAGAAGAGGGCGGCG
CCGACCGGCATCACCATGCCCCGGCCCGTGTCCCCGGCGCTGCAGGCGTTCATGGGCGCCGCCGAGGTCCCCCGCACCGA
GGCCATGAAGCGCATCTGGGCCTACATCAAGCAGAACAACCTCCAGGTATACCCACGCGAA-------CCCCCCAAACCC
TAGGTATCCCG----TTGCCTGGTTGTTCGTTTGGCGTAGTACTAGTTGATTTGGATGTGTGATATCAAGTTGGAAAGGA
ATGCG-----TGAGATGGAATCGCTTGGCG-TTTTGCTAGTGCCGAACAGGAGCAAATCTGAGATTTTGCGTTCAGGACA
GGTGTAAAACTGTTGCGGGCGTA----ATGTGGCGTTTTGCTCTAGAGCCGCCTCACTGTCCATGTCCGCCAGATGTAGA
AGCCCGGTGTATAACGAGGACGTCGCTTGCATTTTTAGTACTCCCTCTGATCCATATCAGTTGTCGCTGAAACGGATGTA
TCTAGACATATTTCAGTGCTAGATACATCCGTTTGAGTGACAACTAATTTGGATCGGAGGGAGTAACTCTACTTCTTAGA
ACGTTCCGTCATGTTTCTATCTTGCTGATATGCAGCGTTGGGTTCTTCTGCTGATGCATGTGGAATGTTCTTGCTCTTGT
CTGATTCCAGTGCAAATTGATGTGTTCTTTCTATCTGCTTGTGGTAAGAACAGATGATTTGCTGCCACATTTTGCTGGTA
TGTGTTGCACATCGATTAGTACTCCATCCGAAAAAGCTTGTCCCTCAAATGAATGTATCTAGCACCAAGTCAGTGCTAGA
TACATCCATTTGAGAGACAAGCTGGGGACAAGCTTTTCCGGACGGAGGGAGTAGTACTTAGCAGAGTCTATGAAAGATGG
TCCCATGAGAAGGAGTTGTGATACTTCCAATGTAATAAA-CTGACTGATGATAAGTCTGAAACAGAGGTTTTTCTCATGT
GGCATTTGTAAGCACGTTGACATCCTTGCTGAACAGAGTTAATTTCTAGATTCAATGTGGCTGGATTGCTTGCATTGTGC
AATTACTGAATGGCGGTATGCTTGCACAATATATA--TAGTGACCAGTGAATGAAGAGTGCATGGTTGATTTGATGAGGA
TGACTTGCCTCCTTTTATGTTCAAACACATTAAGCTACTCGTCACACAACTATTTGAGTGAAGC----ATGAGCTTTTCA
TTCATTGGTGTGAAGTGATGTCTCAAATGTGAAATCTAGCAGTAAATGTAGGATTTGCAGCAACATACAAGGACTTAACT
A-------------------------------------------------------------------------------
----AGTATGTACATACGAACATGCTATTTTCCAGTTGCACTTCTCACTCTGTCCTGCTATTTTCCAGGACCCTGAGGAC
AAGAAGGTCATCGTTTGCGATGAGAAGCTGAAAGCCCTGTTTGCAGGCAGAGACCGTGTTGGGTTCCTGGAGATTGCCAA
GCTTCTGACCCCGCACTTTGTCAAGACTCCGTGAAGCCTCTTCCATGGAGTAGTCGAGTTAGCGTAGGTGGTTTCTACTC
TCTGGTGGTCTTGAGGGTGCGTAGGTTTGTCTTGTTGGCCCGAGTTGGCTCGGACTTCTAGGGTTCTTTAGCTCTCCGCA
GACAATGTTAGTTTACCCCTGGCAGTAGCAATCTGGAACATCTTAACAGCTTTAAGCTCGCATGCTTGCAGACT-GGTTT
GTGTTTGAATAGCAAGTTGTGTGGTCTGGAATCTAAGCGTGGCACACCAGTGGCTGGTGTGAGGGCTTGGAATGCAGAGT
TAACTGCCCCATTCGTGACTGGCAAATCCACC-AAACTGAGCACACAATATATTCAGACGGGCAGAGATTGTCCAATTTG
CGCTTGCGTTCGCTGTTCGGTG-CCTCAGCCGTGTTTCATTGAGGCCGATCATTCAGAGACACGATGGCCATGGAGCTGT
GCCAGCCTCCCCCTCCTCCTGCCCCCTTCCCACATGGTCT------GCCGAGCTGCCACGCCTCAAATGAGACCGGAGGA
TGCTCTGGTAGTTGGGTTGAAGGCACACTGCAGTGTATGCGATGCATCAGCTACGTCTGAGGGTAGACAGACGCTTGGGA
GTGCAGTCGATAGCCGGGCCATCTTCTTCAACTCCGGTCAGTTTT-CTCTTTGCTCTGATCAATGCGCGCGTCAAGTTTA
CTGTTAATTCCGGGCCAGCGCGCA---CCCTCTGCCGGTCCTTTCTTCTTTTTCCCTCGATCAGTTCGGCGTTTCCACCA
TCCTGGCACCATTG-------------------------------------CCACCAGCAGCTAGAATGATCTCACTACA
TGCGAT-TTGTGAATTATTAGACAGTACAAAATGTGGACACAAGGCATTATTTAATTTATTAGA----------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>SNPs
SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS--------------------------S--------------S---------S---------
-S--------S---S-----------SS-S---S---S----S-------S----S--------------S-------S-
-----S--SS------S------S-----S--S-----------S-S-S-S-----S-SSSSSSSSSSSSSS--S----S
----SS---S-------------------------------------S-SSS--S-------------SSSSSSSSSSSS
SSSSSSSSSSSSS-S---S-----S-S-------SS----S-SSS---S-S--S----S---SS----S---S----SS-
S-----S--S----------S-----S----S---------------------SSSS-----------------------
-S-S--------S---S--S-S-----SSSSSSSSSSS---S--SS----SS--S--S-SSS-----SS-S------S--
-------------S---S----------------------S--------S---S--------------------------
--------------------------------------S-------------------S-------SSS-S---------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S------S--------------------SS---------
-------------------------------------------S------------------------------------
-------------------------------------S--SSSSS-----------------------------------
-----------------------------S--------------------------------------------------
-------------------------------------------------SS-----------------------------
----SS------------------------------S-------------------------------------S-S---
----------------------------------------------S---------------------------------
--------SSSS-SS-----------------------------S---S----------------S--------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
----------S--------------------------------S---------------------------SS-------
------------S--------S----S----------------S--------S--------S---------------S--
-------------------S------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------S----------------------------------------S------------------
--------------------------S--------SS----------------------------------------S-S
SSSSS--SSSSSSS---------S----------S-------------------------SSSSSSSS------------
---S---------------------------------S---------------------S--------------------
--------------------------------------------------------------------------------
----------------S----------------------------------------------------------S----
--------------------------------------------S-----------------------------------
-----------S--------------------------------------S-S---------S-----------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
----S--------------------S----------------------S-------------------------------
-------------------------------SS--------------------------S--------------------
-------------------------------S------------------------------------S----S------
---S----------------------------------------------------------------------------
----------------------------S-------------S----S----------------S---S--S--------
---------S----------S-----------------S-----------------------------------------
------S---------S--------S----------S-------------S-----------------------------
-------------------------------SSS----------S----S------------------------------
--S---S-------------------------------S---S------S-------S------S-----------S-S-
----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_118
--------------------------------------------------------------------------------
------------------GGGGAGGTTGCGTTTGTTTG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_2334
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GTTGGCGTTTTGCTCTGGAG-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_163
--------------------------------------------------------------------------------
---------------------------------------------------------------AGTTCTTCGTTCCTCCT
GGC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_2415
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TGAGGACGTCGCTTGCATTT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_2287
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GGCGTTTTGCTAGTGTCGAG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_4537
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------AGACACAGGCACCAAGAGTG----
----------------------------------------------------------------------------
