>input_sequence_52872
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----------------------------------------------------------------------------ATGG
GAGAAGGTAACTGCTTTTCCAACCTTGTATCTG-----------------------------------------------
----------TCTTTTGAGTTGAACTTAAGTTTTCCTTTGCCGTTAGATCGCTTACGTTATGCAGGATCTTTTGAGTTCA
AATTAAGATTTCCTTTGCCGCTAGATCGCTTACGTTATGCAGGAGAACAGAACCCTTAGTCTGTCATTCTAAAAGA----
----------CAGTAATATCTATTACATGATGTTGACATACCGGTATTTAGCTTGATCATACCGGTCTTTAGCATAATAG
TGTATAAACATCAGCGAGATATAACCTAATTATGATTCAGAGTTTACAGTTTTCCCT-TGTTTATTAGGGCT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TTAGCTTGATCATGATGTGCATTATTTGAGTTTTGTTTATACGGTTACTTCTTAATCTGAATCACACTTGGCAT
TGCACAGCAAGCTCGGATGATCTTTGCCATTGTCAAGGGTGTCTTGGCAAGTACACCCTACTCAGAGATGAAGAGAACCC
ACAGCTCGCAAAGTTTGAGAGACGCCTTCCTTGCTTTGGTTGTGGAATAGGATGGTCCTCGTAAGAATCCCTTACCATCC
ACGCAAACTTCAGTTCAGTTTTCAAATTCTGCATCTGGC-AA-ATCAAACATGTTTCGGTTGCAGATTTCTTTTAGGTTT
CTTGTGTCCATTGCTTTGGTACTATGCAACGACTCTTTACTGCTGCAAGTACTACAATAGGGATCCCCGAGAGCGCCCGG
GTCTTGCTGCCTCTGCTATTGCGGTAGGTTGTCCTTCCACAGTAAATCCTGAGCATGTTGCTATAATTAATGAA-CTTGA
AAGAAAACAACTCATAGATGCAAAGTAGTGTAATAGACAAACCATATCTAAGGTACAGAAAGCAAAAGAGTTTTCCTGTA
CAAAGTCATTTCTTCATGCATGTAAACCATCATGCAACCTGATTAGAAGATGTGTTGATGGTTCTGTCACCATATTGAT-
-----------TATTTTTGTAGTCAAGGTGTGTTTTAATCCCGTTTGCTCTATCCTTTTATATGAAAATGCACATATGTG
AAAACGAACCCCATCTGTATATTTTCTATTTTCTATTTTTATGTGCCATTGTTTGCATGTGGAAACATCAAAGCTAGGTT
TCAAACCAGTGTGCAGTCCTTTTAACAGTTTTGTACCTTGACAAACTTGTTCCTCGCAGCAAGTGTTGTTCCTAATGTTT
CAGTTACTAAACAGTGGTCGTGCTGGCAACTCTTTACATC-ATTTGCACTTTTTCTTCTTCTGTCCTGATAAGCTTTCTG
AAATAGTTCTGGTTACAGCAAGTTTTCTTCTGAATGTTTCAATTTTTTTGGTATGTGCAGGCGGCCATCTTCACTACCGC
GGCAACTATTACCCTCTCCATCATTCTGATTATCTGGGCACAAAAGTGA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr3D_1_TraesCS3D01G116300
TGTCGACCGCAAACAAGTCATTGTCCGTG-GTTAAAAAGGGCCGCCCTGGGGTCTCCATCGTCTGGCCTGG-------CT
---CACATAGCGTGGCGGTAGGTGCACGAGACCCGCCGCACCGG--TACCGGCTTCCACACAAATACTACGGG-------
----------CCTTCTCCTCGTGTCCACTCTTCTTCTCCCCTCCCCTGCCCCCTCTCGCCCCTTCTGGTGTTCTCCCCT-
--------------CCCGGCCTCATCCGCCCTTCTCTTCTCCCCCCG-----TCGCGGTTTGCCCCGCCGGCGGCGACGC
GGACCTGCTGGTGCTGG---ATCGGCTTCTTCTCTTTGCGGGTAAGGAACCCTATCCTATCCTATCCTATACCGATTGGG
TTATCTGGGTGGAT--------------------------TCCCTTCTTCCTTTTGCTGTGTGGCGGCCGGCGACCCAAG
CCTGAATCCCCGTCGAGGTAGTTGCCGATTCGTCTGTCTGCTGTGTGGTAGACTGGTTGGTGCTCTTGCCGATTTGTCT-
----------------GGTCTGGCTAGCTCAGCTGCTTCTTCA------GCGCGCGAGACCGATCTGAGGCGGCCCGGTA
GCGCGGCCGCAGTGTATG--------AATTCGTCTAGATTTGTTTGTTCTATACTAACGAGAGTTGGAGTATTAGAGTTC
AGAGCAACAAGAATAGCTCGAAATTATATACTCTCCTGAGTCCAGTGTGCT------GCCGACTTCTGTATGCTAATGTT
TGGAATTTTGGACATGGCACCTGCTGGTCACTACTTTTCTCTTTGCCATGAAAGAATACTTGCAATTGCTCACAACATTT
GTCCCAACCAACTAGACTGATATGTGCGTTCATACAGAAATTGCATTGTATATATAATTTTCTCTCCGGTGCAGCAAGAT
GACCATTCTGACGCCATTTGCAGGATTTATGTGCCAAGCTGCGTACTGTTCTGTTTTATTCCTCGGACCAAACTTGTTGA
GCTGATTCCAGCAAGGAGGAATCTGCAAAGCAGCTTGGTGTTAAGCTTGCATCTTCCCTAAACAGCTCTAGATTAAATGG
GAGAAGGTAACTGCTTTTCCAACCTTGTATCTG-----------------------------------------------
----------TCTTTTGAGTTGAACTTAAGTTTTCCTTTGCCGTTAGATCGCTTACGTTATGCAGGATCTTTTGAGTTCA
AATTAAGATTTCCTTTGCCGCTAGATCGCTTACGTTATGCAGGAGAACAGAACCCTTAGTCTGTCATTCTAAAAGA----
----------CAGTAATATCTATTACATGATGTTGACATACCGGTATTTAGCTTGATCATACCGGTCTTTAGCATAATAG
TGTATAAACATCAGCGAGATATAACCTAATTATGATTCAGAGTTTACAGTTTTCCCT-TGTTTATTAGGGCT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TTAGCTTGATCATGATGTGCATTATTTGAGTTTTGTTTATACGGTTACTTCTTAATCTGAATCACACTTGGCAT
TGCACAGCAAGCTCGGATGATCTTTGCCATTGTCAAGGGTGTCTTGGCAAGTACACCCTACTCAGAGATGAAGAGAACCC
ACAGCTCGCAAAGTTTGAGAGACGCCTTCCTTGCTTTGGTTGTGGAATAGGATGGTCCTCGTAAGAATCCCTTACCATCC
ACGCAAACTTCAGTTCAGTTTTCAAATTCTGCATCTGGC-AA-ATCAAACATGTTTCGGTTGCAGATTTCTTTTAGGTTT
CTTGTGTCCATTGCTTTGGTACTATGCAACGACTCTTTACTGCTGCAAGTACTACAATAGGGATCCCCGAGAGCGCCCGG
GTCTTGCTGCCTCTGCTATTGCGGTAGGTTGTCCTTCCACAGTAAATCCTGAGCATGTTGCTATAATTAATGAA-CTTGA
AAGAAAACAACTCATAGATGCAAAGTAGTGTAATAGACAAACCATATCTAAGGTACAGAAAGCAAAAGAGTTTTCCTGTA
CAAAGTCATTTCTTCATGCATGTAAACCATCATGCAACCTGATTAGAAGATGTGTTGATGGTTCTGTCACCATATTGAT-
-----------TATTTTTGTAGTCAAGGTGTGTTTTAATCCCGTTTGCTCTATCCTTTTATATGAAAATGCACATATGTG
AAAACGAACCCCATCTGTATATTTTCTATTTTCTATTTTTATGTGCCATTGTTTGCATGTGGAAACATCAAAGCTAGGTT
TCAAACCAGTGTGCAGTCCTTTTAACAGTTTTGTACCTTGACAAACTTGTTCCTCGCAGCAAGTGTTGTTCCTAATGTTT
CAGTTACTAAACAGTGGTCGTGCTGGCAACTCTTTACATC-ATTTGCACTTTTTCTTCTTCTGTCCTGATAAGCTTTCTG
AAATAGTTCTGGTTACAGCAAGTTTTCTTCTGAATGTTTCAATTTTTTTGGTATGTGCAGGCGGCCATCTTCACTACCGC
GGCAACTATTACCCTCTCCATCATTCTGATTATCTGGGCACAAAAGTGATTTCTGAGGCAGGGAGAACAGGGCTGGATGA
TTGGTTGTTTATCGGCAGATGAGGGATTCAGAAGGCAACTTCTAATGTTGAGGATAGCAGATCGTTTTAGTTCATCATGT
AATCATAG------TGCATATGCAAGTGTTTATCGAAGGGCTTCATCTATTGATTGTCGTCTCTCCCGAGTCAGTTATTC
AATCTTTCTAAGAGGGTGGGAACAGTTGACTGTTTCTTCTGAAAAGCTTCCAATCCAGAGGCTACAGATCGAATTACATA
AATTAGAGGAAAAATCCATACAGGTAGCCCATTCAGCAGGTAATTGCTGGGATTGAAACTGTAGTCATTACCAGCAACTC
ACCATGGGA---GATACACTGATACACCTGGAAGTCATTATCCAGTATAGCACCGTCGTCTGAGCTTGTCGAATTCTTAA
GAGGTTGAATTTCTGATACACCTATTTTAGTTGCGGGGTGCAGTGTTGTGTGGGTTTTTCATGGTAGTACCAAGTCAAAT
GAGGATCTAGATTGAGTGTTCATCTCGAGA--GCGCGCTTCAGGGAG-----CCATTCCGTCTCTCCAGTTGATTCAAAT
GTTTGGCTATAGAGTTGGTTTATGGCACAGACCTGTTCAAGGATGAATTTTCTGGTTACAGTTTCAAAGTA-ACCGGGAT
TTCATTTTCCAAAACACCTGGCACTTCGTTATTCCAGAGATTCATCATACAAAGTTTGAGGGATGAGCTCGGGAGCAACA
CCATGGAAAACAGAAAAAAGTAGAGAAGCTCACCAGCCCTAGCTAAAACATGCGACGCCTTATTCGTATCAGGGGGACAT
GGTTGAAATATGCAGACAAGAATGAATTCGCAAGCGCCTCAATGTCGAACATGATACAACATTCGCATTTGAACATATCT
GATAAAGTGCTTAAATTAGTTTTATAGGTGATCCAAGGACTTTTCAGTAAATTGCTATGCTTATTTGAAAGCCACATAAC
ATATTTAAAATGCCAAAAAATGCAAC
>chr3A_1
TGTCGACGACGAACGGGTCATTATCCGTGTGTTAAAAAGGGCCGCCCTCGTGTCTCCATCCATCGTCTGGCTCACAATCT
---CACATAGCGTGGCGGTAGGTGCACGAGACCCGCACCGGCGCCCTACCGGTTTCCACACAAATACTACGGG-------
----------CCTTCTCCTCGTGTCCACTCTTCTTCT------------CCCCTCTCGCCTCTTCTGGCGTTCTCCCCT-
--------------CC--------------------------CCCCA-----TCGCGGTTTGCCCCGCCGGCGGCGACGC
GGACCTG---GCTGGCGCGAATCGGCTTCTTCTCTTTGCGGGTAAGGAACCCTATCCTCTCC----------CGATTGGA
TTATCTTGATATGGATTTGTGTGGGAGTTCGTCTCGCGGGTCGCCTCTTCCTTTTGCTGCGTGGCGGCCGGCGACCGAAA
CCCGAATCCCCGTCGAGGTAGTTGCGGATTCGTCCGTCTGCTGCGTGGTAGACTGGTTGGTGCTCTTGCCGATTTGTCT-
----------------GGTCTGGCTAGCTTAGCTGCTTCTTCA------GCGCGCGAGACCGATCTGAGGCGGCC-GGTA
GCGCGGCCGCAGTGTATG--------AATTCGTCTAGATTTGTTTGTGTTCTACTAACGAGGGTTGGAGCATTAGAGTTC
AGAG-AACAATAATAGCTCGGAATTACATGCTCTCCTGAGTAAAGAACCACTGTACCGCCGACTTCTGTATGCTTATGTT
TGGAATTTTGGACATGGCACCTGCTGGTCACTACTTTTCTCTTTGCCATGAAAGAATACTTGCAATTGCTCACAACATTT
GTCCCCACCAACTAGTCTGATATGGGCGTTTATACATAGATTACATTGTATATATAATTTTCTCTCCGATGCGGCAAGCT
GACCAATCTGACGCAC-TTGCAGGATTTATGTGCCAAGCTGCATATTGTTCTGTTTTATTCCTTGGATCAGACTTGTTGA
GCTGATTCCAGCAAGGAGCAATCTGCAACAA--CTTGGTGTTAAGCTTGCATCTTCCCTAAGCAGCTCTAGATTAAATGG
GAGAAGGTAACTGCTTTTCCAACCTTGTATCT------------------------------------------------
---------ATCTTTTGAATTAAACTTAAGTTTTCCTTTGCCGCTAGATCC-----------------------------
----------------------------CTTACGTTATGCAGCAGAACATAACCCTCAGCCTGTCATTGTAAAAATAAAC
TGTTTTTTTCCAGTAACTCCTATTACATCATGTTGGCATGTGTGGTAGCTTTATAGTTG---------------------
----TAAACATCATCAAGTTTCAACCTAATTATGATTCAGAGTTTACAGTTTTTTCTCTGTTTATTAGGGCT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TTAGCTTGATCATGATGTGCATTATTTGAGTTTTGTTTATATGATTACTTCTTAATCTGAATCACACTTGGCAT
TGCACAGCAAGCTCGGATGATCTTTGCCATTGTCAAGGGTGTCTTGGCAAGTACACCCTACTCAGAGATGAAGAGAACCC
GCAGCTGGCAAGGTTTGAGAGACGGCTTCCTTGCTTTGGTTGCGGAATAGGATGGTCCTCGTAAGAATCCCTTACCATCC
ACACAAACTTCAGTTCAGTTTTCAAATTCTGCATCTGGC-AATATCAAACATGTTTCGGTTGCAGATTTCTTTTAGGTTT
CTTGTGTCCATTGCTTTGGTACTATGCAACGACCCTTTACTGCTGCAAGTACTACAATAGGGATCCCCGAGAGCGCCCGG
GTCTTGCTGCCTCTGCTATTGCGGTAGGTTATCCTTCCACAGTAAATCCTGAGCATGTTGCTATAATTAATGTAGCTTGA
AAGAAAACAACTCATAGATGCAAAGTAGTGTAATAGACAAACCATATCTAAGGTACAGAAAGCAAAAGAGTTTTCCTGTA
GAAAGTCATTTCTTCATGCATGTAAACCATCATGCAACCTGATTTGCAGATGTGTTGATGGTTCTGTCACCATATTGATT
CACAGATTGATTATTTTTGTAGTCAAGGTGTGTTTTAATCCCGTTTGCTCCATCC-TTTATATGAAAATGCACATATGTG
AAAACGAACCCCATCTGTATATTTTCTATTTTCTATTTTTATGTGCCATTGTTTGCATGTGGAAACATCAAAGCTAGGTT
TCAAACCAGTGTGCAGCCCTTTTAAAAGTTTTTTACCTTGAAAAACTTGTTCTTCACATCGAGTGTCGTTCCTAATGTTT
CAGTTACTAAACAGTGGTCGTGCTGGCAACTCTTTACATC-ATTTGCAGTTTTTCTTCTTCTGTCCTGATAAGCTTTCTG
AAATAGTTCTGGTTACAGCAAGTTTTGTGCTGAATGTTGCAATTTTTTTGTTATGTGCAGGCGGCCATCTTCACTACTGC
GGCAACTATTACCCTCTCCATCATTCTGATAATCTGGGCACAAAAGTGATTTCTGAGGCAGGGATAACATGGCTGGATGA
TTGGTTGTTTATCGGCAGATGAGGGATTCAGAAGGCAACTTGTAATGTTGATGATAGCAGGTCGTTTTAGTTCATCATGT
AATCATAG------TGCATATGCAAGTGTTTATCGAAGGGCTTCATCTATGGATTGTCGTCTCTCCCGAGTCAGTTATTC
AATCTTTCTAAAAGGGTGGGAACAGTTGACTGTTTCTTCTGAAAAGCTTCCAATCCACAGGCTACAGATCGAATTACATA
AATTAGAGGAAAAATCCATACAGGTAGCCCATTCAGCAGGTAATTGCTGGGATTGAAACTGTAGTCATTATCACCAACTC
ACAATGAGA---GATGCACTGATACACCTGGAAGTCATTATCTAGTATAGCACCGTCCTCTGAACTTGTCGAATTCTTAA
GAGGTTAAATTTCTGATACGCCTATTTTACTTGCGGGGCGTGTTGTG--GTGGGTTTTTCATGGTAGTACCATGTGAGAC
GATGATCCAGATCGAGTGTTCATCTCGAGA--GCGCGCACTTCAGCAATGAACCATTCCGTCTCTCCAGTTGATTCCAGT
GTTTGGATATAGAGTTGATTTATGGCACAGATCTGTTCAAGGATGAATTTTCTGGTTACAGTTTGAAGTACGACCGGGAT
TTCTTTTTCCAAAACATCTGGCACTTAATTATTCCAGAGAATCATCATAAAAAGTTTGAGGGATGAGCTCAGGGGCAACA
TCATGGAAAACAG-AAAAAGTAGGGAAGCTCACCATCCCTAGCTAAAACATGCGCTGCCTTATTCGTATCAAGCGGACAT
GGTTGAAACATGCAGACAAGAATGAATTCACAAGCGCCTCAATGTCGAACAAGATACAACATTTGCATTTGAACATATCT
GACAAAGTGTTTAAACTAGTTTTATAAGTGATC-AAGGACATTTCAGTAAATTGCTATGCTTATTTGAAAGCCACGGAGC
ATATTCAAAATGCCAAAAAATGCAAC
>chr3B_17
----------------GTCATTATCCGTGTGTTAAAAAGGGCCGCCCTCCCTCGTGTCTCCATCCTCCGGCTCACCGACG
CGGCACATAGCGTGGCGGTAGGTGCACGACATCCACACCGCCGG--TACCGGTGCGGGTGCGTGTCCACAAAACCACACC
CATTGGACCTCCTCCTCCTCGGCTCCACTCTTCCGCTTCTCCCCC----CCCTCCTCGCCTCTTCTAGTGCTCTCTACCG
CTCTCCATCCCCACCTCGGTCTCGTCCGGCGCCCCCTTCTCCCTCCCCCACCTCGCGGTTCGCCCCGCCGGCGGCGACGC
GGTCCTG---GTGCTGG---ATCGGTTTCTTATC-TTGCCGGTAAGGAACCCTATCCTGTCC----------CGACTGGA
TTATCTTGATACGGATTTGTGTGTGAGTTCGTCTTGCGGCTCCCTTATTCTGTTTGCTGCGTGGCGGCCGGCGACCGAGG
TCTGAATCCCCGTCGAGGTAGTTGCCGATTTGCCTGTCTGCTGCGTGGTGGACTGGTAGGTGCGCCCTTGCTAATCTAGT
CCACCCACCCGTACCCGGTCTGGCTAGCTTAGCCGCTTCTTCTCCTTCGGCGCGCGAGACCGATCTGAGATGCTCCCCTA
GAGCGGCCGCAACTTATTTTGTATAAAATTCGTCTAGATTTGTT------CTAATATAGAGAGTTGGAGTATTAGAGTTC
AGAGCAACAAGAAATACAG---------TACTCTCCTGAGTAAAGAACCAGTGTACTGCTTTTCCAAAAAAAAAGTTGGA
GTATTAGAGTTCAGAGCAACAAGAAATATAGTACTCTCCTG--------------------------------AACATTT
GTCCCCACCAACTAGACTGATATGCGTGTTCATACAGAGATTACATTGTATATACAATTTTCTCTCCGATGCGGCAGGCT
GACCATTCTGACGCAC-TTGCAGGATTTATGTGCCAAGCCGCGTACTCTTCTGTTTTATTCTTCGGATCAAACTTGTTGA
GCTGATTCCAGCAAGGAGGAATCTGCAAAGCAGCTTGGTGTTAAGCTTGCATCTTCCCTAAACAGCTCCAGATTAAATGG
GAGAAGGTAACTGCTTTTCCAACTTTGTATCTGTCTTTTGAGTTGAACTTAAGTTTTCCTTTGCCGCTAGATCCCCTACG
TTATGCAGGATCTTTTGAGTTAAACTTAAGATTTCCTTTGCCGCTAGATC------------------------------
---------------------------GCTTACATTATGCAGGAGAACAGAACCCTTAGTCTGTCATTGTAAAAGA----
----------CAGTAACATCTATTACATGATGTTGACATACCGGTCTTTAGCATA------------------ATACTAG
TGTATAAACACCAGGGAGATATAACCTAATTATGATTCAGAGTTTACAGTTTTTCCT-TGTTTATTAGGGCTTTGGCAAA
TTTTAACATGGTCCCTCTTACCCCCTCTTTTTACATATGAGGTAAGAAGGTAAGAGTTACTCAGGCCACTAATTAATGTG
ATCAACGGTTCAGATCTATTTCATACTCTTACCTCTCATACGAAAAGAGGAGGTAAGAGGGACCATGTTAAAACTGCTCT
AGGGCTTTAGCTTGATCATGATGTGCATTATTTGAGTTTTGTTTATTCGATTACTTCTTAATCTGAATCACACTTGGCAT
TGCACAGCAAGCTCAGATGATCTTTGCCATTGTCAAGGGTGTCTTGGCAAGTACACCCTACTCAGAGATGAAGAGAACCC
ACAGCTGGCAAAGTTTGAGAGACGCCTTCCTTGCTTTGGTTGCGGAATAGGGTGGTCCTCGTAAGAATCCCTTACCACCT
ACACAAACTTCAGTTCAGTTTTCAAATTCTGCATCTGGC-AATATCAAACATGTTCTGGTTGCAGATTTCTTTTAGGTTT
CTTGTGTCCATTGCTTTGGTACTATGCAACGACTCTTTACTGCTGCAAGTACTACAATAGGGATCCCCGAGAGCGCCCAG
GTCTTGCTGCCTCTGCTATTGCGGTAGGTTGTCCTTCCACAGTAAATCCTGAACATGTTGCTATAATCAATGTAGCTTGA
AAGAAAACAACTCATAGATGCAAAGTAGTGTAATAGATAAACCATATCTA-GGTACGGAAAGCAAAAGAGTTTTCCTAAA
AAA--TCATTTCTTAATGCATGTAAACCATCATGCAACCTGAT-AGCAGATGTGTTGATGGTTCTGCCACCAAATTGATT
CACAGATTGATCATTTTTGTAGTGAAGGTGTGTTTTAACCCCGTTTGCTCCTTCCTTTTCTATGAAAATGCACATCTGTG
GAAATGAATCCATT-TGTATATTTTCTATTTTCTATTTTTACGCGCCGTTGTTTGCTTGTGGAAACATCAAAGCTAGGTT
TCAAACCAGTGTGCAGTCCTTGTAACAGTTTTTGACCTTGACAAACTTGTTCTTCACAGTGAGTGTCGTTCGTAATGTTT
CAGTTACTAAACAGTGGTCATGTTGGCAACTCTTTACATCAATTTGCAGTTTTTCTTCTTCTGTCCTGATA-GCTTTCTG
AAATAGTTCTATTTACAGTAAGTTTTCTTCTGAATGTTTCAATTTTTTTGGTATGTGCAGGCGGCCATCTTCACTACCGC
GGCAACTATTACCCTCTCCATCATTCTGATAATCTGGGCACAAAAGTGATTTCTAAGGCAGGGAGAACAGGGC----TGA
TTGGTTGTTTATCTGCAGATGAGGTATTCAGAAGGCAACTTGTAATGTTGATGATAGCAGATCGTCTTAGTTCATCATGT
AATCATAGTGGCAATGCATATGCAAGTGTTTATCGAAGGGCTTCATCTATTGATTGTCATCTCTCCTGGGTCAGTTATTC
AATCTTTCTAAGAGGGTGCGAACAGTTGACTGTTTCTTCTGAAAAGCTTCCAATCCAGAGGTTACAGATCGATTTACATA
AATTAGAGGAAAAATCCATACAGGTAGCCCATTCAGCAGGTAATTGCTGGGATTGAAACTGTAGTCATTATCACCAACTC
ACCATTGGAGATGATGCACTGATACACCTGGAAGTCATTATCTAGTATAGCACCGTCCTCTGAACTTGTCGAATTCTTAA
GAGGTTAAATTTCCGATACGCCTATTTTACTTGCGGGGCGTGTTGTG--GTGGGTTTTTCATGGTAGTACCATGTGAGAC
GGTGATCCAGATCGAGTGTTCATCTCAAGAGCGCGCGCTTCAGCGAG-----CCATTCCGTCTCTCCAGTTGATTCCATT
GTTTGGATATAGAGTTGATTTATGGCACAGATCTGTTCAAGGATGAATTTGCTGGTTACAGTTTGAAGTCCGACCGGGAT
TTCTTTTTCCAAAACATCTGGCACTTCATTATTCCAGAGAATCATCATAGAAAATTTGAGGGATGAGCTCAGGGGCAACA
TCATGGAAAACAG-AAAAAGTAGGGAAGCTCACCATCCCTAGCTAAAACATGTGCGGCCTTATTCGTATCAGGCGGACAT
GGTTGAAATATGCAGACAAGAATGAATTCGCAAGCGCCTCAATGTCGAACAAGATACAGCATTCGCATTTGAACATATAT
GATAAAGTGTTTAAATTAGTTTTATAAGTGATC-AAGGACTTTTCAGTAATTTGCTATGCTTATTTGAAAGCCACAGAAT
GTATTTAAAATGCCAAAAAATGTAAC
>chr7B_1276
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------AACTTAATTATGTTTCAGAGTTTACAATTTC--CTCTGTTTATTAGGGCT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TTAGCTTGATCGTGGTGTGCATTATTTTAGTTTTGCTTATAAGGTTACTTCTTAATCTTAATCACACTTGTAAT
TGCGCAGCAAGCTCGGATGATCTTTGCCATTATCAAGGGTGTCTTGGCAAGTACACCCTACTCAGAGATGAAGAGAACCC
ACAGCTGGCAAAGTTTGAGAGGCGGCTTCCTTGCTTTGGTTGCGGAATAGGATGGTCCTCGTAAGAATCCTTTACCATCA
ACATAAACATCAGTTTGAC-TTTAAATTCTTCATCTTCTAAATATCAAACATGTTCCGTTTGCAGATTTCTTTTAGGTTT
CTTGTGTCCATTGCTTTGGTACTGCGCAACGACTCTTTACTGCTGGAAGTACTACAACAGGGATCCCCGAGAGTGCCCGG
GTCTTGCTACTTCTGCTATTGCGGTGGGTTTTCCTTCCACGGTAATTCCTGAACGTGTTACTATAATTAATG--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>SNPs
-------SS-S---SS------S-------------------------S-S---------SSSS-S--S-S---------
------------------------------------SS-S------------S---------------------------
-------------------------------------S-S-S---SSSS-----------S-------------------
-------------------S---S----S-SSS-S-----------S---------------------------------
-------SSS------------------------------------------------S---SSSSSSSSSS-------S
------S-S-SSSS---------------------------------------------S----------------S---
-------------------------------------------S------------------------------------
-----------------------------S--------------------------------------------------
-----------------------------------------------SS-S-----------------------------
--------------------S-----S--------------SS--SSSSSS-----------------------S-----
--------------------------------------------------------------------------------
-----S------------------S-------------S---S-------------------------S---S-----S-
--------------SSS--------------------------------------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S---------------------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------S-----------
----------------S----------------------------S------S-SS-SSSSSSSSSSSSSSSS---S---
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-----------------------------------S-------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
S---------------------------------------------S---------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------S-------------------S--S----S-----S-------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
-----------------------------------------S---------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S--S------
---------------S--------------------------S--------------S-----S----------------
------S------------S---------S--------S-SSS---SSS-----------------------S--S-S-S
--S----S----S------------------------------S--------------------------------S-S-
------S----------S-------------S--------------------------------S--SSSS---------
---S------------S----------S------------S--------S--------------------S--S------
S------------S---------S-----------S------------------SS-----------------S------
---------------------------------------------------S----------------------------
---------S----------------S------S------------------------------------------S---
--------------------------
>forward_208
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TCTTCTTCTCCCCTCCCCTG--------------------------------
--------------------------------------------------------------------------------
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--------------------------
>reverse_2533
--------------------------------------------------------------------------------
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----------------------------------------------------CTCGCAGCAAGTGTTGTTCC--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_524
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------CCGATTCGTCTGTCTGCTGT------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>reverse_2536
--------------------------------------------------------------------------------
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-------------------------------------------------------GCAGCAAGTGTTGTTCCTAATGT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_771
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------TCTCCTGAGTCCAGTGTGCT-----------------------------
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--------------------------
>reverse_2842
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------CTAATGTTGAGGATAGCAGATCGT---------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
