>input_sequence_52787
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---------------------------------------------------------ATGGCGACGCTGGCGTTCGCGGT
GCGCCGGCGCGATCCAGAGCTCGTCGGCCCGGCCGCGCCGACGCCTCGTGAGACCAAGCGCCTGTCTGAGATCGACGACC
AGGACACGCTGCGCGGGCACGTGTCCTTCGCCCTCGTCTACCGCGCCCGCGTGATGGATGACGACGACGTCGCACCGGTT
CACCCGGCCGGAGTCATCCGGCGCGCGCTCGGTGAAGTACTGGTGCACTACTACCCGCTGGCTGGACGGCTCAGAGAGGC
GGAGGGGCGGAAGCTAGTGGTCGAGTGCAGCGGTGAGGGGGTGATGTTCGTGGAGGCCGACGCCGACGTGCGGCTGGAGG
AGCTCGAGGGGG------CCGGGCTCAGGCCGCCGTTCCCGTGCATGGACCAGCTGCTCTTCGACGTGGAGGGCTCCGGC
GGCGTGCTCAACTGCCCGTTGCTGCTCATCCAGGTATCTGTAATGGTGGTTAATTTGCATTTGTTGAATGCATGAGTTAA
ACGTATGTACTGTCCTATCATGGTCAC---------CAGGTGACTCGGCTGCTCTGGGGCGGCTTCATCTTCGCGCTCCG
CCTCAACCATACCATGTGCGACGCCATCGGCATCGTGCAGTTCATGAACGCCGTCGCCGAGCTCGCCCGCGGCCTCCCGG
CGCCGACCGTCGCTCCCCCGTGGTCCCGTGAGCTCCTAGAGGCGCGCAACCCGCCTATGGCGTCGTTCCCGCACCGCGAG
TTCGACCTTA---TTCCACCGCCGGCGCCGCCGGCCGGCGACATGGTCATGCGGTCCTTCATTTTCGGCCCCTCCGACCT
CGCAGCGATCAAGAAGCATCTCCCTCCTCTCGTTCGCGACAAGGCCACCACCTTCGAGGCGCTGGCGGCATACCTCTGGT
GCGCCCGCACGGCGGCGCTCGAGGTCCCGCAG---GGCGAGGAAGCGCGGCTGGTCATCATCGCCAACTTCCGGGCCTTC
GT---CGAGCTGGGCCTGCCGGGCGGATACTATGGAAACGCGTGCGTGCCCCTGGCCGCGCTGGCCGACGCCGCTGCACT
GCGCGGGGGTGGCTCGCTGGCTGACGCGGTGGCGCTGGTGCGGCGGGCCAAGGCTGCAGTGACCGCCGAGTACGTGCGTT
CCACGGTCGACGTGCTGGTTCTGCGCGGCCGGCCGTTCTTGGCACTGCAGAACCTGTTCGTCGTGTCCGACAACCGGCAC
GCCGGGTTCCACCGCGTCGACTTCGGGTGGGGCGAGCCGGTGTACGGCGGCCCGGCCGACACTGTCTTCGGCGTGACCTT
CCTCGTCCCCGTCAAGGACCGTGACGGGGAGGACGCGATTACCGTGCCGATCGTGTTGCCACGGCCGGCCATGGAGCGGT
TCGCGGCGGAGATGGAGAGCCTGTGCAAGGCGTAG---------------------------------------------
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>chr1A_1_TraesCS1A01G084000
AATGCCTGCGATATATTCGAGGAAAATGGAAGTAGCCATCCGCAAGAATCAAATGGTCTAGGAATGATGTTTACAGACTA
-------------ATCTTATCTCTGCTTCTAAACAAGCCCCTGGATGACAAGGGCTTGATATGGTGAATTTGTAATACAT
AAGACATGATGTGGCACTGGTTCTATTTTC-------------ACCAAGGGAGGGCAGAATTTTTTATAATATCTTTGTT
GTTCCAACAAA---GGGGGGAAGGAGCAGAAGCGCAATATATGCCTCCCCTAAAAAATGACTTGTGATATCAGGGACGGG
ATTAAAAACGAGTGCCTTCAAACTTGGGCCAAAAACTACCGCTCCTTTTTGCTATGAAATTTTGTGACATGATATACGAT
TTATGTTATGCAGTACAAGATTGTTGCGTGCTGTTGGAAATTTGTTTTACCTTTTTGTATGTAAACTTCGAAGGGTTAT-
--------------------------------------------------------------------------------
----------------------------------------ATTCATCCATCTTTTACGAGTTTCCTTTGCGGACCTCTGA
GCGCGGCTAAAGGTCAAAACTTTGCGAGGATGAAATTGTGTGGATATCGAATATTTTGACGG------------------
------TGTGAAAGCACGAGTTGGGAGCATTTGCAGATCCTGGGAGGTTGAGCATGCGGATCCGGAGCATTTGCAGATCC
TGGGAGGTTGAGCATGCGGATGCGGTCAGCTGCAATGTTTGAAGCAGTTTAACTTGCTCCTTTGTTTTGGTCCAAACTAC
TCCATCAAGTCCATGTAAATCGGACAAACATGGCACAATGTTATAAGACGAGAGCTCCCAGCCAGGTATCT-AGTTTCTC
CCCTTTTAACCGAGCACTAGGACGTTTTCCAGCTTTGCTCCAAAATGTCAAGCATTGCATTGTTGGACTTTTCGGACGCT
GGACTTTCCGGCTGCGAACAATTCGCACTCTGCACAAGTTCTACTGCCGAGAGTAACTCTCGAC--GTATGGTTTCCAGC
TTGTTCCAAGATCATCCTGCGCCGGAGTCCAAGGAGCCCGCCCACGCGACCGCCGCCATGGCGACGCTGGCGTTCGCGGT
GCGCCGGCGCGATCCAGAGCTCGTCGGCCCGGCCGCGCCGACGCCTCGTGAGACCAAGCGCCTGTCTGAGATCGACGACC
AGGACACGCTGCGCGGGCACGTGTCCTTCGCCCTCGTCTACCGCGCCCGCGTGATGGATGACGACGACGTCGCACCGGTT
CACCCGGCCGGAGTCATCCGGCGCGCGCTCGGTGAAGTACTGGTGCACTACTACCCGCTGGCTGGACGGCTCAGAGAGGC
GGAGGGGCGGAAGCTAGTGGTCGAGTGCAGCGGTGAGGGGGTGATGTTCGTGGAGGCCGACGCCGACGTGCGGCTGGAGG
AGCTCGAGGGGG------CCGGGCTCAGGCCGCCGTTCCCGTGCATGGACCAGCTGCTCTTCGACGTGGAGGGCTCCGGC
GGCGTGCTCAACTGCCCGTTGCTGCTCATCCAGGTATCTGTAATGGTGGTTAATTTGCATTTGTTGAATGCATGAGTTAA
ACGTATGTACTGTCCTATCATGGTCAC---------CAGGTGACTCGGCTGCTCTGGGGCGGCTTCATCTTCGCGCTCCG
CCTCAACCATACCATGTGCGACGCCATCGGCATCGTGCAGTTCATGAACGCCGTCGCCGAGCTCGCCCGCGGCCTCCCGG
CGCCGACCGTCGCTCCCCCGTGGTCCCGTGAGCTCCTAGAGGCGCGCAACCCGCCTATGGCGTCGTTCCCGCACCGCGAG
TTCGACCTTA---TTCCACCGCCGGCGCCGCCGGCCGGCGACATGGTCATGCGGTCCTTCATTTTCGGCCCCTCCGACCT
CGCAGCGATCAAGAAGCATCTCCCTCCTCTCGTTCGCGACAAGGCCACCACCTTCGAGGCGCTGGCGGCATACCTCTGGT
GCGCCCGCACGGCGGCGCTCGAGGTCCCGCAG---GGCGAGGAAGCGCGGCTGGTCATCATCGCCAACTTCCGGGCCTTC
GT---CGAGCTGGGCCTGCCGGGCGGATACTATGGAAACGCGTGCGTGCCCCTGGCCGCGCTGGCCGACGCCGCTGCACT
GCGCGGGGGTGGCTCGCTGGCTGACGCGGTGGCGCTGGTGCGGCGGGCCAAGGCTGCAGTGACCGCCGAGTACGTGCGTT
CCACGGTCGACGTGCTGGTTCTGCGCGGCCGGCCGTTCTTGGCACTGCAGAACCTGTTCGTCGTGTCCGACAACCGGCAC
GCCGGGTTCCACCGCGTCGACTTCGGGTGGGGCGAGCCGGTGTACGGCGGCCCGGCCGACACTGTCTTCGGCGTGACCTT
CCTCGTCCCCGTCAAGGACCGTGACGGGGAGGACGCGATTACCGTGCCGATCGTGTTGCCACGGCCGGCCATGGAGCGGT
TCGCGGCGGAGATGGAGAGCCTGTGCAAGGCGTAGCGTGTGCCCGGGTCGTCCCTGTATGTATTACGACTCAGTACGTGC
GGCATGCGGCTTGCAGGGCTGGGTTGAAAGTTTTTTGGAGCGAGCGGAGGCTGCTCTGAGTGGATTCTTCGCTGTGTCGA
CTATGTTGAAGACTACTCTGATGTCGCATGCTCTTTGTGCAAACGGTGTTTGCTTTGGAAAGGACAAGGGGGCGGAGTTA
TTC-GGATGTTTCTCCCCTTGTGGTGGAGACAACTCAGCATCGATGCCTACCTTGCCCCCT-ATATTGTCTTCCACTGAG
GGCGAGTCCATGGCCGTTGTCGTGGCTCCGATGTTGAAGAACATGCCTGAGCTTAGGGAGCTTTGTATGAGTCTGTCAGT
GGAG-AATATGAAGATAGGCTCGTCGGCGACCTCATGTGAGGAACATGACTCCTCTTTGTCATGTGTGCATCTGAAGAAT
GTGGATGCGTGTG--GTGTGTTGGCACCACCTTTTGAGAGCCGCTTGGTGACTGA---TCGCTCGACATCCGGCAAGACA
GATGGTTGCCTCGTGAAGATGAAATCAAAGAGAAACAAACGCAAGAAGTGTGATGGCAAAGAGAAGGCATACGTGATTTC
A-TGATGGGCAGTACTCACTTTCTCGTGTCTTCGTCGTGGCT---------------------------------TTGAT
CTTCTGAGTCGTTGCATCGATGTTCTCACCAAGTGTTGAGGGTTGTGAGTGTTGTGTGTTAGGAGCATCGGGTGGGCAGT
GTATGTATTCGTGGTGCTTCGTGCTCTGTGAGTAGCCCTCTTTTGGGTTGTTTGTATCAGTTTTCGCCCAGTTTTTCGTA
AATTAACTGGGCAATTCTCTTCTTCTTAATTAATCGATGAGGCAA-TTCTTTTGCCTCCGTTTCGAAAAAAATAAAAAAG
GATCGCATATGGTATGTCAGTTATGTCATGACATGGCCCGGCCCAGGACGACGGCCCAAGGCCGCCAGGCGGAGACTGGA
CAGGGCGTTCCGAGTCCAGGATAAATAGGGAGAAGTGC
>chr1D_1
AATGCCTGCGATATATTCGAGGAAAATGGAAGTAGCCATCCGCAAGAATCAAATGGTCTAGGAATGATGTTTACAGAGTA
GAGTGTTTATTCCATCTTATCTCTGCTTGTAAACAAGCCCCTGGATGATAAGGGCTTGATATGGTGAATTTGCAATACAC
AAGACATGATGTGGCACTGGTTTCTGTCTC-------------ACCAAGGGGAGGCAGAATTTTTTACAATTTCTTTGTT
GTTCAAACAAA---GCGTGAAAGGAGCAGAAGCGCAATATATGCCTCCCCTAAAAAATGAC--GTGATATCAGGGATGGG
ATTAAAAACGAGCGCCTTCAAACTTGGGCCAGAAACTACCGCTCCTTTTTGCTATGAAATTTTGTGACATGATATACGAT
TTATGTTCT---GTACAAGATTGTTGCGCGCTGTTGGAAATTTGTTTTACCTTTTTGTATGTACACTTCGGAGGGTCAT-
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----------------------------------------ATTCATCTATCTTTTACGAGTTTTCTTTGTGGACCTCTTA
GCGCGGCTAA----------------------------------------------------------------------
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>chr1B_1
AATGCCTGCGATATATTCGAGGAAAATGGAAGTAACCATCCGCAAGAATCAAATGGCCTAGGAATGATGTTTACAGACTA
GAGTGTTTATTCGATCTCATATCTGTTTCTAAGCAAGCCCCTGGATGATAAGGGCTTGATAAGGTGAATTTGCAATACAT
AAGACATGATGTGGCGCTTGCGTTTGTACTGTGTTAAAAAAAAACTAAGGGTGGTCAGTTTTTTTTAATA-----TTGTT
GTTCCAACAAGGTGGCAGGAGCGAAGGGGAAGGGCAATATTGGGACGGAGGCAGTATGATTTATTCCCTAGTTGTACTAA
ATCAGCTACGCTTATTTTGGGACTGAAGTAG-------------------------------------------TATGAT
TTATGTTCT---GTACAAGATTGTTGCGTGCTGCTC-AAATTTGTTTTACCTTCTTACTCTACTGAGTTACTCTCTCCGT
CCGGAAATACTTATCATCAAAATGAATAAAAAGGGATGTATCTAGATGTATATTAGTTCTAGATACATTATTTTTTATCC
ATTTTGATGACAAATATTTTCGGACGGAAGGAGTATATTCATTCATTCATCTTTTACGAGTTCCGTCTGCGGACCTCTGA
GCGCAGCGAAAGGTCAAAAATTTGCGAGGATGAAATTGTTTGGATGTGGAATATTTTGACGAGGCTAAGCTAATTATAGT
TGTGGCTGTGAAAGCACGAGCTGGGAGCATTTGCAGATCCTGGGA----------------------------------C
TGGGAGGGTGCGCATGCGGATACGGTCAGCTGCAATGTTTGAAGCAGTTTTACTTTCCCCATTATTTTGGTCGAAACTCC
TCCATCAAGTCCAAGTAAAGCAGACAAATACGGCATAATGTTAGAAGACGAGAGCTCCCAGCCAGGTATCT-AGGTTCTC
CCCTTTTAACCGAGAACTAGGACGTTTTCCAGCTTTGCTCCAAAATGTCAAGCATTGCATTGTTGGACTTTTCGGATGCT
GGACTTTCCGGCTGCGAACAATTCGCACTCTGCACAAGTACTAGTGCTGAGAGTAACTCTTGACGTGTATGGTTTCCAAC
TTGTTCCAAGATCATCCCGCGCCGGAGTCCAAGGAGCCCGCCCACGCGACCGCCGCCATGGCGACCCTGGCGTTCGCGGT
GCGCCGGCGCGAGCCAGAGCTCATCGGCCCGGCCGCGCCGACGCCTCGCGAGACCAAGCGCCTGTCTGAGATCGACGACC
AGGACACGCTGCGCGGGCACGTGTCCTTCGCCCTCATCTACCGTGCCCGCGTGATGGATAACGACGACGTCGCGCCGATT
CACCCGGCCGGAGTCATCCGGCGCGCGCTCGGCGAGGCGCTGGTGCACTACTACCCGCTGGCTGGGCGGCTCAGGGAGGT
GGAGGGGCGGAAGCTGGTGGTCGACTGCGGCGGCCAGGGGGTGATGTTCGTCGAGGCCGACGCCGACGTGCGGCTGGTGG
AGCTCGAGGCGG------CCGGGCTCAGGCCGCCGTTCCCGTGCATGGACCAGCTGCTCTTCGACGTGGAGGGCTCCAGC
GGCGTACTCAACTGCCCATTGCTGCTCATCCAGGTATATCTAATGGTGGTTAATTTGCATTTGTTGAATGCATGAGTTAA
A--TATGCACTATTCTATCATGGTCAC---------CAGGTGACTCGGCTGCTCTGCGGCGGCTTCATCTTCGCGCTCCG
CCTCAACCACACCATGTGCGACGCCATCGGCATCGCGCAGTTCATGAACGCCGTCGCCGAGCTCGCCCGCGGCCTCCCGG
CGCCGACCGTCGCGCCCGCGTGGTCCCGTGAGCTCCTGGAGGCGCGCAGCCCGCCTATGCCGTCGTTCCCGCACCGCGAG
TTCGACCTTA---CTCCGCCGCCGGCGCCGCCGGCCGGCGACATGGTCATGCGGTCCTTCACTTTCGGCCCCGCCGACCT
CGCCGCGATCAAGAAGCACCTCCCTCCTCTCGTTCGCGACGAGGCCACCACCTTCGAGGCGCTCGCGGCATACCTCTGGC
GCGCCCGCACGGCGGCGCTCGAGGTCCCGCTG---GCCGAGGAAGCGCGGCTGGTCATCATCGCCAACTTCCGGGCCTTC
GT---CGAGCTGGGCCTGCTGGATGGATACTACGGAAACGCGTGCGTGCCCCTGGCGGCGCTAGCCGACGCCGCTGCACT
GCGCGGCGGTGGCTCGCTGGCCGACGCGGTGGCGCTGGTGCGGCGCGCGAAGGCTGCGGTGACCGCCGAGTACGTGCGTT
CCACGGTCGACGTGCTGGTTCTGCGCGGCCGGCCGTTCTTGGCACTGCAGAACCTGTTCGTCGTGTCCGACAACCGGCAC
GCTGGGTTCCACCGCGTCGACTTCGGGTGGGGCGAGCCGGTGTACGGCGGCCCGGCTGACACAGTCTTCGGCGTGACCTT
CTTCGTCCCCGTCAAGGACCGTGATGGGGAGGACGCGATTGCCGTGCCGATCGTGCTGCCACGGCCGGCCATGGAGCGGT
TCGCGGCGGAGATGGAGAGCCTGTGCAAGGCGTAGCGTGT----------------------------------------
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>chr1D_497
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------CTAAAGGTCAAAAACTTGCGAAGATGAAATTGTGTGGATATCGAATATTTTGACGG------------------
------TGTGAAAGCACGAGTTGGGAGCATTTGCAGATCCTGGGA-----------------------------------
-----GGGTGCGCATGCGGATCCGGTCAGCTCCAATGTTTGAAGCAGTTTAACTTGCTCCTTTGTTTTGGTCCAAACTAC
TCCATCAAGTCCATGTAAATCAGACAAATACGGCATAATGTTATAAGACGAGAGCTCCCAGCCAGGTATCTAAGTTTCTC
CCCTTTTAACCGAGCACTAGGACGTTTTCCAGCTTTGCTCAAAAATGTCGCGCACTGCATTGTTGGACTTCTCGGATACT
GGGCTTTCCGGCTGCGAACAATTCGCGCTCTGCACAAGTATCACTGCCGAGAGTAACTCTCGACTTG--TGGTTTCCAAC
TTGTTCCAATCTCATCCTGCGCCGGACTCCAAGGAGCTCGTCCACACGGCTACCGCCATGCCGACGCTGGCGTTCGCGGT
GCGCCGGCGCGACCCGGAGCTCGTCGGCCCGGCCGCGCTGACGCCTCGTGAGACCAAGCGCCTGTCTGAGATCGACGACC
AGGACACGCTGCGCGGGCACGTGTCCTTCGCCCTCATCTACCGTGCCCGCGTGATGGATGACGACGACGTCGCGCCGGTT
CACCCGGCCGGAGTCATCCGGCGCGCGCTCGGCGAGGCGCTAGTGCACTACTACCCGCTGGCTGGGCGGCTCAGGGAGGT
GGAGGGGCGGAAGCTGGTGGTCGACTGCACCGGCGAGGGGGTGATGTTCGTGGAGGCCGACGCCGACGTGCGGCTGGAGG
AGCTCCAGGCGG------CCGGGCTCAGGCCGCCGTTCCCGTGCATGGACCAGCTGCTCTTCGACGTGGAGGGCTCCAGC
GGCGTACTCAACTGCCCATTGCTGCTCATCCAGGTATATCTAATGGTGGTTAATTTGCATTTGTTGAATGCATGAGTTAA
A--TATGCACTATTCTATCATGGTCAC---------CAGGTGACTCGGCTGCTCTGCGGCGGCTTCATCTTCGCGCTTCG
CCTCAACCACACCATGTGCGACGCCATCGGCATCGCCCAGTTCATGAACGCCGTCGCCGAGCTCGCCCGCGGCCTCTCGG
CGCCGACCGTCGCGCCCGCGTGGTCCCGTGAGCTCCTGGAGGCGCGCAGCCCGCCTATGCCGTCGTTCCCGCACAGCGAG
TTCGACCTTA---TTCCGCCGCCGGCGCCGCCGGCCGGCGACATGGTCATGCGGTCCTTCACTTTCGGCCCCGCCGACCT
CGCCGCGATCAAGAAGCACCTCCCTCCTCTCGCTCGCGACAAGGCCACCACCTTCGAGGCGCTCGCGGCATACCTCTGGC
GCGCCCGCACGGCGGCGCTCGAGGTCCCGCTG---GGCGAGGAAGCGCGGCTGGTCATCATCGCCAACTTCCGGGCCTTC
GT---CGAGCTGGGCCTGCCGGACGGATACTACGGAAACGCGTGCGTGCCCCTGGCGGCGCTGGCCGACGTCGCTGCACT
GCGCGGCGGTGGCTCGCTGGCCGACGCGGTGGCGCTGGTGCGGCGCGCGAAGGCTGCGGTGACCGCCGAGTACGTGCGTT
CCACGGTCGACGTGCTGGTTCTGCGCGGCCGGCCGTTCTTGGCACTGCAGAACCTGTTCGTCGTGTCCGACAACCGGCAC
GCCGGGTTCGACCGCGTCGACTTCGGGTGGGGCGAGCCGGTGCACGGCGGCCCGGCCGACACTGTCTTCGGCGTGACCTT
CTTCGTCCCCGTCAAGGACCGTGACGGGGAGGACGCGGTTGCCGTGCCGATCGTGCTGCCACGGCCGGCCATGGAGCGGT
TCGCGGCGGAGATGGAGAGGCTGTGCAAGGCGTAGCGTGTGCCCGGGTCGTCCCTGTATGTATTACGACTCGGTACGTGC
GGCATGCGGCTTGTAGGGCT------------------------------------------------------------
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>chr2A_1223
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---------------------------------------CTGGTGCACTACTACCCACTCGCCGGACGGCTGCGCGAGGT
GGGAAACCGGAAACTGGTCGTCGACTGCACCGGCCAAGGGGTGACGTTCGTCAAGGCGGACGCCGACGTGCGACTGGCGG
ATCTCGAGGCCGACGTGCCCGGGCTGATGCCGCCATTCCCGTGGATTGAGGAGCTCTGCTTCGAGGTGGACGGCTCCAGC
GCTCTGCTCAACTGCCCCCTGGTGATCATTCAGGTAATTAAGCATTTCATATTTGCACGTGAGCACACACATTATCCACG
CACAGTTAGAGGCTAACAACTTTTCTTGCCGATGGTCAGGTGACGCGGCTCCTGTGCGGCGGCTTCGCCGTGTGGCATAG
CTTCAACCACACCATGTGCGACGCCGCGGGGTTCATCCAGTTCCTGAACGCCGTCGCCGAGCTCGCTCGAGGCCTTCCTG
CGCCGACCGTCGCACCTGCCTGGTCTCGCGAGGTTCTTGACGCGCGAAGCCCCCCAACGCCTGCATTCCCGCACCGCGAG
TACGATCCAGTGCCTCGGACGCAGACACCAACCGAGGATGACATTGTAAGGCGCGCCTTCGTGTTCGGCCCTTCGGAAGT
CGCCGCGATCGAGAAAGTCATGCCGCCTCACCTCCGAGACAGGGCAACGAGCTTCGAGGTGCTCGCGGCGGTGCTGTGGC
GCGCCCGCACGGCGGCGTTGAGGACGCTCTGGTCCGACGAGGAGGCACGGCTGGTGACCGTCGTCAGCGTGAGGAGGCAC
AGCACCGCCCTGCGCCTCCCCGCCGGCTACGACGGCTTCGCTTGCGCGTACGTCACCGTGGTGATGGCCGCCGGCACGCT
GCTCAGCT---GCTCGTTGGCGGAGGTGGTGGAGCAGGTGCGGGAGGCCAAGGCGTCGGTGACCCCCGAGTATATGCGCT
CCACGGCGGACCTTCTGGTGCTCCGTGGGCGGCCGCCTTTGGCCAGGGCAAATATGTTCCTTCTGTCTGACCTCCGGCAC
GTTGGGTTCCAACGTGTGGACTTCGGGTGGGGCGAGCCGGTGTACGGCGGGCCCTCTGGCATCAAGTTCGGGAGCGCCTT
CTTTGTGGCAGTCAAGAACAGCGACGGGGCGGATGCGGTGGCAGTGCCGGTCGCACTGCCAACCATGGCCATGGAGAAGT
TCGCGGCGGAGATCCAGAGC------------------------------------------------------------
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>chr2D_1525
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------------------------------------CAGGTGACGCGGCTCCTGTGTGGCGGCTTCGCCGTGTGGCATAG
CTTCAACCACACCATGTGCGACGCCGCGGGGTTCATACAGTTCCGGAACGCCGTCGCCGAGCTCGCTCGAGGCCTTCCTG
CGCCGACCGTCGCACCTGCCTGGTCTCGCGAGGTTCTTGACGCGCGAAGCCCCCCAACGCCTGCATTCCCGCACCGCGAG
TATGATCCAGTGCCTCGGACGCAGACACCAAAGGAGGATGACATTGTAAGGCGCGCCTTCGTGTTCGGCCCTTCGGACGT
CGCCGCGATCAAGAAAGTCATGCCGCCTCACCTCCGAGACAGGGCAACGAGCTTCGAGGTGCTCGCGGCGGTGCTGTGGC
ACGCCCGCACGGCGGCGTTGAGGACGCTCTGGTCCGACGAGGAGGCGCGGCTGGTGACCGTCGTCAGCGTGAGGAGGCAC
AGCAGCGCCCTGAGCCTCCCCGCCGGCTACTACGGCTTCGCTTGCGCGTACGTCACCGTGGTGATGGCCGCCGGCACGCT
GCTCAGCT---GCTCGTTGGCAGACGTGGTGGAGCAGGTGCGGGAGGCGAAAGCGTCGGTGACCCCCGAGTATATGCGCT
CCACGGCGGACCTTTTGGTGCTCCGTGGCCGGCCGCCTTTGGCCAGGGCAAATATGTTCCTTCTGTCTGACCTCCGGCAC
GTTGGGTTCCAACGCGTGGACTTCGGGTGGGGCGAGCCGGTGTACGGCGGGCCCTCTGGCGTCAAGTTCGGGAATGCCTT
CTTTGTGGCTGTCAAGACCAGCGACGGAACGGACGCGGTGGCAGTGCCGGTCGCACTGCCAACCATGGCCATGGAGAAGT
TCGCGGCGGAGATCCAGAGCTTGCTCAAGG--------------------------------------------------
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>chr1D_2460
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--------------------GGGTTGAAAGTTTTTTGGAGCGAGCGGAGGCTGCTCTGAGTGGACTCTCCGCCGTGTCGA
CTATGTTGAAGACTACTCTGACGTCGCATGCTCCTTGTGCAAACGGTGTTTGCTTTGGAGAGGACAAGGGGGCGTAGTTA
TTC-GGATGTTTCTCCCCTCGTGGTGGAGACAATTCAGTATCGATGCCTTCCTCGCCCCCT-ATATTGTCTTCCACTGAG
GGTGAGTCCATGGCCGTTGTCGTGGCTCCGGTGTTGAAGATCATGCCTGAGCTTAGGGAGCTTTGTATGAGTCTGTCAGT
GGAG-AATATGAAGATGGACTCGTCGGCAACCTCATGTGAGGAACATGACTTATCTTTGTCATGTGTGCATCTGAAGAAT
GTGGATGCGTGTGTGGTGTGTTGGCACCGGCTTTTGAGAGCCGCTTGGTGACTGA---TCGCTCGACATCCGGCAAGACA
GATGGTTGCCTCGTGAAGGTGAAATCAAAAAGAAACAAACGTAAGAAGTGTGACGGCAAAGAGAAGGCATACGTGATTTC
A-TGATGGATAGTGCTCACATTCTCGTGTCGTCGTCGTGGCT---------------------------------TTGAT
CTTCTGAGTCATTGCATCGACGTTCTCACCAAGTGTTGAGGGTTGTGAGTGTTGTGTGTTATGAGCATTGGGTGGGCAGT
GTATGTGTTCGTGGTGCTTCGTGCTTTGTGAGTAGCCCTCTTCTGGGTTGTTTGTATCGGTTTTCGCCCAGTTTTTCATA
AATTAACTGGGCAATTCTCTTCTTCTTAATTAATCGGTGAGGCAA-TTCTTTTGCCTCCGTTTCAAAAAAAAATAA----
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>chr1B_2460
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--------------------GGGTTGAAAGTTTTTTGGAGCGAGCGGAGGCTGCTCTGAGTGGACTCTCCGCCGTGTCGG
CTATGTTGAAGACTACTCTGACGTCGCATGCTCCTTGTGCAAACGGTGTTTGCTTTGGAGAGGACAAGGGGGCAGAGTTA
TTC-GGATGTTTCTCCCCTCGTGGTGGAGACAATTCAGCATCGATGCCTACCTCCCCCCCT-ATATTGTCTTCCACCGAG
GGCGAGTCCATGGCCGTTGTCGTGGCTCCGGTGTTGAAGATCATGCCTGAGATTAGGGAGCTTTGTATGAGTCTGTCAGT
GGAG-AATATGAAGATGGACTCGTCGGCGACCTCATGTGAGGAACATGACTTATCTTTGTCATGTGTGCATCTGAAGAAT
GTGGATGCGTGTG--GTGTGTTGGCACCGGCTTTTGAGAGCCGCTTGGTGACTGATCGTCGCTCGACATCCGGCAAGACA
GATGGTTGCCTCGTGAAGGTGAAATCAAAGAGAAACAAACGCAAGAAGTGTGACGGCAAAGAGAAGGCATACGTGATTTC
A-TGATGGATAGTCCTCACATTCTCGTGTCGTCGTCGTGGCT---------------------------------TTGAT
CTTCTGAGTCATTGCATCGATGTTCGCACCAAGTGTTGAGGGTTGTGAGTGTTGTGTGTTATGAGCATTGGGTGGGCAGT
GTATGTGTTCATGGTGCTTCGTGCTCTATGAGTAGCCCTTTTTTGGGTTGTTTGTATCGGTTTTCGCCCAGTTTTCCGTA
AATTAACTGGGCAATTCTCTTCTTCTTAATTAATCGATGAGGCAA-TTCTTTTGCCTCCGTTTCGAAAAAAA--------
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>chr6A_2460
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--------------------GGGTTGAAAGTTTTTTGGAGCGAGCGGAGGCTGCTCTGAGTGGACTCTCCGCTGTGTCGA
CTATGTTGAAGACTACTCTGACGTCGCATGCTCCTTGTGCAAACGGTGTTTGCTTTGGAGAGGACAAGGGGGCGGAGTTA
TTC-GGATGTTTCTCCCCTCGTGGTGGAGACAACTCAGCATCGATGCCTACCTCGCCCCCT-ATATTGTCTTCCACTGAG
GGCGAGTCCATGGCCGTTGTCGTGGCTCCGATGTTGAAGATCATGCCTGAGCTTAGGGAGCTTTGTATGAGTCTGTCAGT
GGAG-AATATGAAGATAGACTCGTCGGCGACCTCATGTGAGGAACATGACTCCTCTTTGTCATGTGTGCATCTGAAGAAT
GTGGATGCGTGTG--GTGTGTTGGCACCGCCTTTTGAGAGCCGCTTGGTGACTGA---TCGCTCGACATCCGGCAAGACA
GATGGTTGCCTCGTGAAGGTGAAATCAAAGAGAAACAAACGCAAGAAGTGTGATGGCAAAGAGAAGGCATACGTGATTTC
A-TGATGGGTAGTGCTCACATTCTCGTGTCTTCGTCGTGGCT---------------------------------TTGAT
CTTCTGAGTCGTTGCATCGATGTTCTCACCAAGTGTTGAGGGTTGTGAGTGTTGTGTGTTAGGAGCATTGGGTGGGCAGT
GTATGTGTTCGTGGTGCTTCGTGCTATGTGAGTAGCCCTCTTTTGGGTTGTTTGTATCGGTTTTCGCCCAGTTTTTCATA
AATTAATTGGACAATTCTTTTCTTCTTAATTAATCGATGAGGCAA-TTCTTTTACCTCCGTTTTGAAAAAAA--------
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>chr2A_2460
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--------------------GGGTTGAAAGTTTTTTGGAGCGAGCGGAGACTGCTCTGAGTGGACTCTCCGCTGTGTCGA
CTATGTTGAAGACTACTCTGACGTCGCATGCTCCTTGTGCAAACGGTGTTTGCTTTGGAGAGGACAAGGGGGCGGAGTTA
TTC-GGATGTTTCTCCCCTCGTGGTGGAGACAACTCAGCATCGATGCCTACCTCGCCCCCT-ATATTGTCTTCCACTGAG
GGCGAGTCCATGGCCGTTGTCGTGGCTCCGATGTTGAAGATCATGCCTGAGCTTAGGAAGCTTTGTATGAGTCTGTCAGT
GGAG-AATATGAAGATAGACTCGTCGGCGACCTCATGTGAGGAACAGGACTCCTCTTTGTCATGTGTGCATCTGAAGAAT
GTGGATGCGTGTG--GTGTGTTGGCACCGCCTTTTGAGAGCCGCTTGGTGACTGA---TCGCTCGACATCCGGCAAGACA
GATGGTTGCCTCGTGAAGGTGAAATCAAAGAGAAACAAACGCAAGAAGTGTGATGGCAAAGAGAAGGCATACGTGATTTC
A-TGATGGGTAGTGCTCACATTCTCGTGTCTTCGTCGTGGCT---------------------------------TTGAT
CTTCTGAGTCGTTGCATCGATGTTCTCACCAAGTGTTGAGGGTTGTGAGTGTTGTGTGTTAGGAGCATTGGGTGGGCAGT
GTATGTGTTCGTGATGCTCCGTGCTCTGTGAGTAGCCCTCTTTTGGGTTGTTTGTATCGGTTTTTGCCCAATTTTCCGTA
AATTAACTGGGCAATTCTCTTCTTCTTAATTAATCGATGAGGCAAATTTTTTTGCCTTCGTTTTGAAAAAAA--------
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>chr2D_2460
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--------------------GGGTTGAAAGTTTTTTGGAGCGAGCGGAGGCTGCTCTGAGTGGACTCTCCGCTGTGTCGA
CTATGTTGAAGACTACTCTGATGTCGCATGCTCCTTGTGCAAACGGTGTTTGCTTTGAAGAGGACAAGGGGGCGGAGTTA
TTC-AGATGTTTCTCCCCTTGTGGTGGAGACAATTCAGCATCGATGCCTACCTCG-CCCCT-ATATTGTCTTCCACTGAG
GGCGAGTCCATGGCCGTTGTCGTGGCTCCGGTGTTGAAGATCATGCCTGAGCTTAGGGAGCTTTGTATGAGTCTGTCAGT
GGAG-A-TATGAAGATGGACTCGTCGGCGACCTCATGTGAGGAACATGACTTATCTTTGTCATGTGTGCATCTGAAGAAT
GTGGATGCGTGTG--GTGTGTTGGCACCGGCTTTTGAGAGCTGCTTGGTGACTGA---TCGCTCGACATCCGGCAAGACA
GATGGTTGCCTCGTGAAGGTGAAATTAAAGAGAAACAAACGCAAGAAGTGTGACGGCAAAGAGAAGGCATACATGATTTC
A-TGATGGATAGTGCTATCATTCTCGTGTCGTCGTCGTGGCT---------------------------------TTGAT
CTTCTGAGTCGTTGCATCGATGTTCTCACCAAGTGTTGAGGGTTGTGAGTGTTGTGTGTTAGGAGCATTGGGTGGGCAGT
GTATGTGTTCGTGGTGCTTCGTGCTCTGTGAGTAG-CCTTTTTTGGGTTGTTTGTATCGGTTTTCGCCCAGTTTTTCATA
AATTAACCGGGCAATTCTCTTCTTCTTAATTAATCGATGAGGCAA-TTCTTTTGCCTCTGTTTCGAAAAGAAAAAAAAG-
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>chr6B_2460
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--------------------GGGTTGAACGTTTTTTGGAGCCAGCGGAGGCTGCCCTGAGTGGACTCTCCGCCATGTCAA
CTATGTTGAAGACTACTCTGACGTCGCATGCTCCTTGTGCAAACGGTGTTTGCTTTGGAGAGGACAAGGGGGCGGAGTTA
TTC-GGATGTTTCTCCCCTCGTGCTGGAGACAATTCAGCATCGATGCCTACCTCGCCCCCT-ATATTGTCTTCCACTGAG
GGTGAGTTCATGGCCGTTGTCGTGGCTCCGGTGTTGAAGATCATGCCTGAGCTTAGGGAGCTTTGTATGAGTTTGTCAGT
AGAGAA-TATGAAGATGGACTCATCGGCGACCTCATGTGAGGAACATGACTTATCTTTGTCATGTGTGCATCTAAAGAAT
GTGGATGCGTGTG--GTGTGTTGGCACCGGCTTTTGAGAGCCGCTTGGTGACTGA---TCGCTCGACATCCGGCAAGACA
GATGGTTGCCTCGTGAAGGTGAAATCAAAAAGAAACAAACACAAGAAGTGTGACGGCAAAGAGAAGGCATACGTGATTTC
A-TGATGGATAGTGCTCACATTCTCGTGTCGTCGTCGTGGCT---------------------------------TTGAT
CTTCTGAGTCATTGCATCGATGTTCTCATCAAGTGTTGAGGGTTGTGAGTGTTGTGTGTTATGAGCATTGGGTGGGCATT
GTATATGTTCGTGGTGCTTCGAGCTCTATGAGTAGCCCTCTTCTGGGTTGTTTGTATCGGTTTTGGCCCAGTTTTCTGTA
AATTAACTGGGCACTTCTCTTCTTCTTAATTAATCGATGAGGCAA-TTCTTTTGACTCCGTTTCGAAAAAAAATAAAAAA
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>chr6B_2460
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--------------------GGGTTGAAAGTTTTTTGGAGCGAGCGGTGGCTGCTTTGAGTGGACTCTCCGCTGTGCTGA
AAATGTTGAAGACTACTCTGACGTCGCATGCTCCTTGTGCAAACGGTGTTTGCTTTGGAGAGGACAAGGGGGCGGAGTTA
TTC-GGATGTTTCTCCCCTCGTGGTGGAGACAATTCAGCATCGATGCCTACCTCG-CCCCCAATATTGTCTTCCACTGAG
GGCGAGTCCATGGCCGTTGTCGTGGCTCCGGTGTTGAAGATCATGCCTGAGCTTAGGAAGCTTTGTATGAGTTTGTCAGT
GGAGAA-TATGAAAATGGACTCGTCGGCGACCTCATGCGAGGAACATGACTCATCTTTGCCATGTGTGCATCAAAAGAAT
GTGGATGCGTGTG--GTGTGTTGGCACCGGCTTTTGAGAGCCGCTTGGTGTCTGA---TCGCTCGACATCCGGCAAGACA
GATGGTTGCCTCGTGAAGGTGAAATCAAAGAGAAACAAATGCAAGAAGTGTGACAGCAAAGAGAAGGCATACATGATTTC
ATTGATGGATAGTGCTCACATTCTCATGTCGTCATCGTTGCTTTGATCTTTTGAGTCATTGCCGTCGTCATTGCTTTGAT
CTTCTGAATCGTTGCATAGATGTTCTCACCAAGTGTTGAGGGTTGTGAGTGTTGTGTGTTAGGAGCATTGGGTGGGCAGT
GT----------GGTGCTTCGTGCTCCGTGAGTAGCCCTCTTTTGGGTTGTTTGTATCGGTTTTCGTACAATTTTCCGTA
AATTAACTGGGCAGTTCTCTTCTTCTTAATTAATCGATGAGGCAA-TTCTTTTGCCTCAGTTTCGAAAAAAATA------
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>chr4D_2512
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------------------------------------------------------------------------TGTGTCGA
CTATGTTGAAGACTACTCTGAGGTCGCATGCTCCTTGTGCAAACGGTGTTTGCTTTGGAGAGGACAAGGGGGCGGAGTTA
TTCGGGATGTTTCTCCCCTCGTGGTGGAGACAATTCAGCATCGTTGTCTACCTGGCCCCCT-ATATTGCCTTCCACTGAG
GGCGAGTCCATGACCGTTGTCGTGGCTCCGGTGTTGAAGATCATGCCTGAGCTTAGGCAGCTTTGTATGAGTCTGTCAGT
GGAGAA-TATAAAGATGGACTCGTCGGCGACCTCATGTGAGGAACATGACCCATCTTTGTCATGTGTGCATATGAAGAAT
GTGGATGCGTGTG--GTGTGTTGGCACCGGCTTTTGAGAGCCGCTTGGTGACTGA---TCGCTCGACATCCGGCAAGACA
GATGGTTGCTTCGTGAAGGTGAAATCAAAGAGAAAAAA-CGCAAGAAGTGTGACGGCAAAGAGAAGACATACGTGATTTC
A-TGATGGATAATGCTCACATTCTCGTGTCGTCGTCGTGGCT---------------------------------TTGAT
CTTCTGAGTAGTTGCATCGATGTTCTCACCAAGTGTTGAGGGTTGTGAGTGTTGTGTGTTAGGAGCATTGGGTGGGCAGT
GTATGTGTTTGTGGTGCTTCGTGCTCTGTGAGTAGCCCTCTTTTGGGTTGTTTGTATCGGTTTTCGCCTAGTTTTCCGTA
AATTAACTGGACAATTCTCCTTTTCTTAATTAATCGATGAGGCAA-TTCATTTGCCTCCGTTTCGAAAAAAGATAAA---
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>chr3D_2633
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----------------------------------TCAGCATCGATGCCTGCCTCGCCCCCT-ATATTGTCTTCCACTGAG
GGCAAGTCCATGGCCGTTGTCGTGGCTCCGGTGTTGAAGATCATGCCTGAGCTTAGGGAGCTTTGTATGAGTCTGTCAGT
GGAGAA-TATGAAGATGGACTCGTCGGCGACCTCATGTGAGGAACATGATTCATCTTTGTCACATGTGCATCTGAAGAAT
GTGGATGCGTGTG--GTGTGTTGGCACCGACTTTTGAGAGCCGCTTGGTGACTGA---TCACTCGACATCCGGCAAGACA
GATGGTTGCCTCGTGAAGGTGAAATCAAAGAGAAACAAACACAAGAAGTGTGACGGTAAAGAGAAGGCATACGTGATTTC
A-TGATGGATAGTGCTCACATTCTCGTGTTGTCGTCGTGGCT---------------------------------TTGAT
CTTCTGAGTCGTTGCATCGACGTTCTCACCAAGTGCTGAGGGTTGTGAGTGTTGTGTGTTAGGAGCATTGGGTGGGCAGT
GTATGTGGTCGTGGTGCT--GTGTTCTGTGAGTAGCCCTCTTTTGGGTTGTTTGTATCGGTTATCGCCTAGTTTTCCGTA
AATTAATTAGGCAACTCTCTTCTTCTTAATTAATCGATGAGGCAA-TTCTTTTGCCTCCGTTTCGAAAAAAA--------
--------------------------------------------------------------------------------
--------------------------------------
>SNPs
--------------------------------------------------------------------------------
------------------------------------------------S-----------------------S-------
----------------------S-SS-S-----------------------S---------------S---S--------
---------------S---S------------------------------------------S-----------------
-------------------------------S------------------------------------------------
-------S-SSS---------------------------------------------------S------S-----S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
---------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
-------S--S----------S----------------------------------------------------------
---------------------S------S-S----S--------------------------------------------
----------------------------------------------------------------------------S---
---------------------------------------S--------------------------------------S-
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
-----------------------------------S-------S-----------------------------S------
--------------------------------S--S-SS-----------------------------------S----S
---------------S--------S--------S----------------------------------------------
---------S-------------------------------------------------------------------S--
-----------------S-------------------S-S----------------------------------------
-SS----S-----S------------------------------------------S-----------------------
---------S----------------------------------------------------------------------
-------------S---S-------------------S----------S----------S--------------------
-----------------S--------------------------------------------------------------
---S--------------S--------------------------------------------S---------------S
------------------------------S-------------------------------------------------
----------------------S---------S-----------------------------------------------
------S--------------S-----------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S--------------------------------------S--------------S------------------------
-----------------------------------------------------------------------S--------
-------------S--------------------------------------------------S---S-----------
---------------------------------S-------------------------S--------------------
-----------------------------------------------------S--------------------------
----------------------------------------S---------------------------------------
------------------S-------------------------------------------------------------
----------------------------S---------------------------------------------------
------------------S-------------------------------------------------------------
---------S---S-----S------------------------------------------------------------
--------------------------------------------------------------------S-----------
------S---------------------------------------------------S---------------------
-------------------------------------------------------------------------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_772
--------------------------------------------------------------------------------
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--------------------------------GCAGATCCTGGGAGGTTGAG----------------------------
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>reverse_2183
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----------------------GCGGATACTATGGAAACGCG--------------------------------------
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--------------------------------------
>forward_774
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------AGATCCTGGGAGGTTGAGCA--------------------------
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--------------------------------------
>reverse_2654
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------CAGGGCTGGGTTGAAAGTTT-----------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------
