>input_sequence_52765
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-----------------------------------------------------------------ATGGAGAGGAAGTCC
GCCATTCTCATGAACCGGTACGAGCTTGGTCGTATGCTCGGGCAAGGCACCTTCGCCAAGGTGTACCATGCGCGGAGCCT
TGCGACCAACCAGAGCGTCGCCATCAAGGTCATTGACAAGGAGAAGGTGCTGCGTGTCGGCATGATTGACCAGATCAAGC
GGGAGATCTCCATCATGCGCCTGGTTCGCCACCCAAACATCGTCCAGCTGCACGAGGTCATGGCCAGCAAGACCAAGATA
TACTTTGCCATGGAGTATGTCCGGGGCGGCGAGCTCTTTGCCAGGGTGGCCAAGGGCCGGCTCAAGGAAGATGCTGCAAG
GAAGTACTTTCAACAGTTGATAGGGGCTGTGGACTTTTGCCACAGCCGTGATGTCTATCACCGGGACCTCAAGCCGGAGA
ACCTCCTTGTGGATGAGCATGGAAACCTCAAGGTGTCCGACTTCGGGTTGAGTGCCCTCAAGGAGTGTCAGAAGCAAGAC
GGGCTGCTGCACACAACGTGTGGCACACCTGCATATGTTGCGCCGGAGATAATCAACAAGAAGGGCTATGATGGAGAAAA
GGCAGACATATGGTCTTGTGGTGTCATACTTTTTGTTCTGCTTGCTGGTTACCTCCCATTCCAAGACTCAAATTTGATGG
AGATGTACCGGAAGATCAGCAAAGGTGATGTCAGGCATCCACAGTGGTTCAGTTCTGATGCCCGGAAGATTCTATCCAGG
CTGCTCGACCCTAATCCAAACACTAGGATCACCATGGACAAGCTGATTGAGCACCCGTGGTTCAAGAAAGGGTACAAACC
AGCAGTGACTCTGG------CAACGCCACGTGCCTCAAAGGATCTTAATGATGTCCAGGCTGCTTTCAGCACGGACCAAA
AGGATGGTAAAGGCAACAGGGCAGAACAACCAAATAGCCCATTGAAGCCAGCGAGCTTGAATGCGTTTGACATAATCTCC
CTCTCCAAAGGTTTTGATCTTTCTGGCCTATTTGAGAAGGACCAAGAGCAGAAGTCGAACTCGCGGTTCATGACCCAAAA
ACCCGCATCAGCAATAGTGTCAAAGCTGGAGCAGATAGCTGAGACAGAGTCCTTCAAGGTGAAGAAGCAGGACGGACTGG
TGACGCTGCAGGGATCCAAAGAAGGGAGGAAGGGGCAGCTTGCGATTGATGCGGAGATCTTTGAAGTGACTCCATCCTTC
TATGTTGTTGAGGTGAAGAAGTCGGCAGGAGACACATTGGAGTACGAACGGTTCTGCAAGAAGGGCCTACGGCCTTCTCT
CAAGGACATCTGCTGGAATGGTCCGTCAGAGGAAAAGCTTCCATCAGTATCGGAGTCAGTACCTCCAACTCCGTCCTCCA
AGTCGACCAAAAGAAATGGCATTTAA------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------
>chr3D_1_TraesCS3D01G151500
GTGGCAAGAGACTAAACTAGGGTCAATGTCCTGGAAGATTCTCACCATCGTCCATTTGTCAGCTAAAAATGAGAAAGGAT
---GGACACCTATTGCCAGGATTCAGAACGAAAGAAAAGTACCACCTGAACGCATATGTACAGCATGCGTGTGGCTCTGT
CTCTGATTG----TGGAGAAGTGAGAATTCTTCAAGCAAAAACCCAATGTATGTAAATGAAAAACAAAGGAAGAAGCAAA
GGGAGGTTGGCATCAGTTGCATCCAGATCACGCAAGA----------CCACGGCCAAACCACCCCAGAAACATATGC-TC
AGCACATGCATTGTTGCACCCTCAGCTCGGCAAACTGGTCGATTATGGAAAACCTAACACCTT-GCTCGGAGACATCAGC
CGTGATGGCCACATGCGCGGCCCAAGCTAAGTGGTCACCAGCCCAACACCCCACCCACCCCACATCTTGTTAAACAAGCC
AATCATGGATATGACATTCAATTACTACTATTCACATAATGCAATGCACCAGCAAGCAGTTCCCATCACGAAAGACACAT
GTAATTGTTGCACAGAAAGATGGAAGGCTGGGATGGAAGGCTAGGATGTGTGGATGGGTTCATTCAGAGCAGGCCGGTGA
GGCTCCCCCTGCCTACAAATAGCACCAGAAACCACAGCCATCCAACGCAACGTGCCCGGCTTATTATTAGGCGGCCTGTT
CCAGCTCCAGAGAGGGAAGGGCG-----AGCTCCTGGCCTCATGTCGCGAGGAAAGCTCTAGCCACCGCAGACTATTCTT
CTCTCCCACCATCCTCTCCTTCATCCTTGGAGGATTCTGAGAAAACAGACCAGTCGTGTATTAGTTTTCCCCCCAATCAC
AGCGCGCTCTCGCCCTTCACCTCTCCTCCCTCTCGGGGAGGGAGGGACACAGAGGCACGAAGTGGCGCAGAGTAGACGCT
TGT-GAACACCCAATTTTACCTCCACCCAGCTTGCTGCTGCTCTTGTGCACAAGGATCCGATAGGATGGAGAGGAAGTCC
GCCATTCTCATGAACCGGTACGAGCTTGGTCGTATGCTCGGGCAAGGCACCTTCGCCAAGGTGTACCATGCGCGGAGCCT
TGCGACCAACCAGAGCGTCGCCATCAAGGTCATTGACAAGGAGAAGGTGCTGCGTGTCGGCATGATTGACCAGATCAAGC
GGGAGATCTCCATCATGCGCCTGGTTCGCCACCCAAACATCGTCCAGCTGCACGAGGTCATGGCCAGCAAGACCAAGATA
TACTTTGCCATGGAGTATGTCCGGGGCGGCGAGCTCTTTGCCAGGGTGGCCAAGGGCCGGCTCAAGGAAGATGCTGCAAG
GAAGTACTTTCAACAGTTGATAGGGGCTGTGGACTTTTGCCACAGCCGTGATGTCTATCACCGGGACCTCAAGCCGGAGA
ACCTCCTTGTGGATGAGCATGGAAACCTCAAGGTGTCCGACTTCGGGTTGAGTGCCCTCAAGGAGTGTCAGAAGCAAGAC
GGGCTGCTGCACACAACGTGTGGCACACCTGCATATGTTGCGCCGGAGATAATCAACAAGAAGGGCTATGATGGAGAAAA
GGCAGACATATGGTCTTGTGGTGTCATACTTTTTGTTCTGCTTGCTGGTTACCTCCCATTCCAAGACTCAAATTTGATGG
AGATGTACCGGAAGATCAGCAAAGGTGATGTCAGGCATCCACAGTGGTTCAGTTCTGATGCCCGGAAGATTCTATCCAGG
CTGCTCGACCCTAATCCAAACACTAGGATCACCATGGACAAGCTGATTGAGCACCCGTGGTTCAAGAAAGGGTACAAACC
AGCAGTGACTCTGG------CAACGCCACGTGCCTCAAAGGATCTTAATGATGTCCAGGCTGCTTTCAGCACGGACCAAA
AGGATGGTAAAGGCAACAGGGCAGAACAACCAAATAGCCCATTGAAGCCAGCGAGCTTGAATGCGTTTGACATAATCTCC
CTCTCCAAAGGTTTTGATCTTTCTGGCCTATTTGAGAAGGACCAAGAGCAGAAGTCGAACTCGCGGTTCATGACCCAAAA
ACCCGCATCAGCAATAGTGTCAAAGCTGGAGCAGATAGCTGAGACAGAGTCCTTCAAGGTGAAGAAGCAGGACGGACTGG
TGACGCTGCAGGGATCCAAAGAAGGGAGGAAGGGGCAGCTTGCGATTGATGCGGAGATCTTTGAAGTGACTCCATCCTTC
TATGTTGTTGAGGTGAAGAAGTCGGCAGGAGACACATTGGAGTACGAACGGTTCTGCAAGAAGGGCCTACGGCCTTCTCT
CAAGGACATCTGCTGGAATGGTCCGTCAGAGGAAAAGCTTCCATCAGTATCGGAGTCAGTACCTCCAACTCCGTCCTCCA
AGTCGACCAAAAGAAATGGCATTTAAGTGTGATATCTTCCGAGTTGCAATTACAATCTATTCTCCTCTCTCTTTCTTCCC
TCCTCAAAGAGCTGAGACTTTGCTCACTTGAGCTGAGCATCAAGCTTTAGGGCTCTTTGTTAATCTTTTTTTGCAGTTTC
CAATTTGTGGTAGCAATTGTAGTATATGGTTCTCCTGTTCTGTTCACCAATAGAAGCACAAAAGGTGACGGTAACACTCT
TACAG-TGTTGCTCTGGGACAAGCATACCATCACCTGCAAAAAA-GATTTTGTAAGAGCCAAAGCTATTATAGGATGATT
AGAACT--------------------TCATAAATGACCATGGCAGATAGCATAGAACAGATTCC--------TCTCTGTG
TCATATTCCCGGTATGTTCTCTTGCGACTTGAGTACATCCTACTTGTTATGAAGTTCTAAGTAAAATACAGATGCATTAA
ACAAGTAGCATGGATTTGATGGAGCGCAGAAATAAAATTCTGAAGTGCCCAACAATTATTTATTTAGTACAAAGTTAGTA
CAAAATTGAGTCACTTGTTTTGGGACGGAGTGAGTATATTAAAGCAGAAATAAACCACGGGACCAATATTATATATAACC
TGTTAACCACCAGAGTTGCTCGTACAAAATAATCAACCTCTTCACTTGGTGATGTTACAAATGCATGCTTCTACCAGAAA
TGAATGATTCTGGTCAAACAACTTAGGATAAGAATTCTTCAGCAGAAACAAGCCACAATCAACTTACATAT-TATCAAAA
TCATGTGAGATATACAAAGTGACATCACCAGAAGTCAAAGAAGCAGAGAGCTTTATCTTTGTTGTCCATACACGGAAAAT
ATGAAATCACGGTCTTATGATGGCATTATTGACTTATTGTTCTAATTGAGTAATAAACATTATCAAACCAGTTGACAT--
ACAAAATAAACCAACTCCAAATGAAATTTGAACAACATAGTT-GATGACCTTTCACCCACCCAAACTTCTTGATATAACT
TTATTTGCGACAGATCCAAA
>chr3B_1
GTGGCAAGAGACTAAACTAGGCTCAGTGTCCTGGAAGGTTCTCACCATCGTCCATTTGTCAGCTAAAAATGAAAAAAAGG
ATGGGACACCTATTGCCAGGATTCAGAAAGAAAGGAAAGTAGCACCTGAATGCATATGTACAGCATGCGTGTGGTTCTGT
CTCTGATTG----TGGAGAAGTGAGAATTCTTCAAGTAAAAACACAATGTATGTAAATGAAAAACAAAGGAAGAAGCAAA
AGGAGGTTGGCATCAGTTGCATCCAGATCACGCAAGATGTGGAGCAACGACGGCCAAACCACCCCAAAAACATATGCCTC
ATCACATGCATTGTTGCACCCTCAACCCAGCAAACTGGTCGATTACGGAAAACCTAACGTCTTGGCTCGGAGACATCAAC
CGTGATGGCCACATGCGCGGCCCAAGCTAAGTGGTCACCAGCCCAACACCTCACCCACCCCACTCCTTGTTAAACAAGCC
AATCATGGATATGACATTCAATTACTACTATTCACATAATGCAATGCACCAGCAAGCAGTTCCCATCACGAAAGACACAT
GTAATTGTTGCACAGAAAGATGGAAGGCTGGGATGGAAGGCTAGGATGTGTGGATGGATTCATTCAGAGCAGGCCGGTGA
GGCTCCCCCTGCCTACAAATAGCACCAGAAACCACAGCCATCCAACACAACGTACCTGGCTTATTATTAGGCGGCCTGTT
CCAGCTCCAGAGAGGGAAGGGCG-----AGCTCCTGGCCTCATGTCGCGAGGAAAGCTCTAGCCACCGCAGACTATTCTT
CTCTCCCACCATCCTCTCCTTCATCCTTGGAGGATTCTGAGAAAACAGACCAGTCGTGTATTAGTTTTCCCCCCAATCAC
AGCACGCTCTCGCCCTTCACCTCTCCTCCCTCTCGGGGAGGGAGGGACACAGAGGCACGAAGTGGCGCAGAGTAGACGCT
TGT-GACAACCCAATTTACCTCCA--CCAGCTTGCTGCTGCTCTTGTGCACAAGGATCCGATAGGATGGAGAGGAAGTCC
ACCATTCTCATGAACCGGTACGAGCTTGGTCGTATGCTCGGGCAAGGCACCTTCGCCAAGGTGTACCATGCGCGGAGCCT
TGCGACCAACCAGAGCGTCGCCATCAAGGTCATTGACAAGGAGAAGGTGTTGCGTGTCGGCATGATTGACCAGATCAAGC
GGGAGATCTCCATCATGCGCCTGGTTCGTCATCCAAACATCGTCCAGCTGCATGAGGTCATGGCCAGCAAGAGCAAGATA
TACTTTGCCATGGAGTATGTCCGGGGCGGCGAGCTCTTTGCCAGGGTGGCCAAGGGCCGGCTCAAGGAAGATGCTGCAAG
GAAGTACTTTCAACAGTTGATAGGGGCTGTGGACTTCTGCCACAGCCGTGATGTCTATCACCGGGACCTCAAGCCGGAGA
ACCTCCTCGTGGATGAGCACGGAAACCTCAAGGTGTCCGACTTCGGGTTGAGTGCCCTCAAGGAGTGTCAGAAGCAAGAT
GGGCTGCTGCACACAACGTGCGGCACACCTGCATATGTTGCGCCAGAGATAATCAACAAGAAGGGCTATGATGGAGAAAA
GGCAGACATATGGTCTTGCGGTGTCATACTTTTTGTTCTGCTTGCTGGCTACCTCCCATTCCAAGACTCAAATTTGATGG
AGATGTACCGGAAGATCAGCAAAGGTGATGTCAGGTATCCACAGTGGTTCAGTTCTGATGCCCGGAAGATTCTATCCAGG
CTGCTCGACCCAAATCCAAACACAAGGATCACCATGGACAAGCTCATTGAGCACCCGTGGTTCAAGAAAGGGTACAAACC
AGCAGTGACTCTGG------CAACGCCACGTGCCTCAAAGGATCTTAATGATGTCCAGGCTGCTTTCAGCACGGACCGCA
AGGATGGTGAAGGCAACAGGGCACAACAACCAAATAGCCCATTGAAGCCAGCGAGCTTGAATGCGTTTGACATAATCTCC
CTCTCCAAAGGTTTTGATCTCTCTGGCCTATTTGAGAAGGACCAAGAGCAGAAGTCGAACTCGCGGTTCATGACCCAAAA
ACCCGCATCAGCAATAGTGTCAAAGCTGGAGCAGATAGCTGAGACAGAGTCCTTCAAGGTGAAGAAGCAGGACGGACTGG
TGACGCTGCAGGGATCCAAAGAAGGGAGGAAGGGGCAGCTTGCGATTGATGCGGAGATCTTTGAAGTGACTCCATCCTTC
TATGTTGTTGAGGTGAAGAAGTCGGCAGGAGACACATTGGAGTACGAACGGTTCTGCAAAAAGGGCCTACGGCCTTCTCT
CAAGGACATCTGCTGGAACGGTCCGTCAGAGGAAAAGCTTCCATCAGTATCGGAGTCAGTACCTCCAACTCCGTCCTCCA
AGTCGACCAAAAGAAATGGCATTTAAGTGTGATATCTTCTGAGATGCAATTACAATCTATTCTCCTCTCTCTTTCTTCCC
TCCTCAAAGAGCTGAGACTTTGCTCACT-----TGAGCATCAAGCTTTAGGGCTCTTTGTTAATCTTTTTT-ACAGTTTC
CAATTTGTGGTAGCAATTGTAGTATATGGTTCTCCTGTTCTGTTCACCAATAGAAGCACAAAAGGTGACAGTAACACTCT
TACAG-TGTTGCTTTGGGACAAGCATACCATCACCTGCAAAAAA-GATCTTGTAAGAGCCAAAGCTATTATAGGATGATT
AGAACT--------------------TCATAAATCACCATGGCAGATAGCATAGAACAGATTCC--------TC------
--ATATTCCTGGTATGTTGTCTTGCGACTTGAGTATATCCTACTTGTTATGAAGTTCTAAGTAAAATACAGATGCATTAA
ACAAGTAGCACGGATTTGATGGAGTGCAGAAATAAAATTCTGAAGTTTCCAACAATTATTTATTTACGTGTTATACCGAA
A---------------------------------TATACTAAAGCAGAAATAAATCACGGGACCAATATTATATATAACC
TGTTAACCACCAGAGTTGCTCATACAAAATAATCAACCTCTTCACTTGGTGATGTCACAAATGCATGCATCTACCAGAAA
CGAATGATTCTGGTCAAGCAACTTAGGATAAGAAATCTTCAGCAGAAACAAGCCACAATCAACTTACATATATATCAAAA
TCATGTGAAATATACAAAGTGACATCAGCAGAAGTCAAAGAAGCAGAGAGCTTTATCTTTGTTGTCCATACATGGAAAAT
ATGAAATCACGGTCTTATGATGGCATTATTGACTTATTGTTCTAATTGAGTAA---ACATTATCAAACCAGTTGACAT--
AAAAAAAAAAC----TTCAAATGAAATTTGAACAACATAGTT-GATGACCTTTCACCCACCCAAACTTCTTGATATAACT
TTATTTGCGACAGATCCAAA
>chr3A_1
GTGGCAAGAGACTAAACTAGGGTCAATGTCCTGGAAGCTTCTTACCGCCGTCCATTTGTCAGCTAAAAATGAAAAAGGTT
---GGACACCTATCGCCAGAATTGAGAGAGAAAGAAAAGTACCACCTGAATGCATATGTACAGCATGCGTGTGGTCAGTT
GCATCCAGATCAATGTAAAACTGAGAATTATTTTAAGTCAAAAGTCA---ATGTAAATGAAAAACAAAGGAAGAAGCAAA
GGGAGGTTGGCATCAGTTGCATCCAGATCACGCAAGATGTGGAGCAACCACGGCCAAACCACCCCAGAAACATATGCTTC
ATCACATGCCTTGTTGCACCCTCAACTCGGCAAACTGGTCGATTACGGAAAACCTAACATCTTTGATCGGAGACATCAGC
CGTGATGGCCACATGCGCGGCCCAAGCTAAGTGGTCACCGGCCCAACACCTCACCCACCCCACACCTTGTTAAACAAGCC
AATCATGGATATGACATTCAATTACTACTATTCACATAATGCAATGCACCAGCA-GCGGTTCCCATCACGAAAGGCACAT
GTAATTGTTGCACAGAAAGATGGAAGGCTGGGATGGAAGGCTGGGATGTGTGGATAGATTCATTCAGAGCAGGCCGGTGA
GGC-CCCCCTGCCTACAAATAGCACCAGAAACCACAGCCATCCAACGCAACGTACCCGGCTTATTATTAGGCGGCCTGTT
CCAGCTCCAA--AGGGAAGGGCGAGCCAAGCTCCTGGCCTCATGTCGCGAGGAAAGCTCTAGCCACCGCAGACTATTCTT
CCCTCCCACCATCCTCTCCTTCATCCTTGGAGGATTCTGAGAAAACAGACCAGTCGTGTATTAGTTTTCCCCCCAATCAC
AGCGCGCTCTCGCCCTTCACCTCTCCTCCCTCTCGGGGAGGGAGGGACACAGAGGCACGAAGTGGCGCAGAGTAGACGCT
TGTAGAACAGCCAATTTACCTCCA--CCAGCTTGCTGCTGCTCTTGTGCACAGGAATCCGATAGGATGGAGAGGAAGTCC
ACCATTCTCATGAACCGGTACGAGCTTGGTCGTATGCTCGGGCAAGGCACCTTCGCCAAGGTGTACCATGCGCGGAGCCT
TGCGACCAACCAGAGCGTCGCCATCAAGGTCATTGACAAGGACAAGGTGTTGCGTGTCGGCATGATTGACCAGATCAAGC
GGGAGATCTCCATCATGCGCCTGGTTCGTCACCCATACATCGTCCAGCTGCACGAGGTCATGGCCAGCAAGAGCAAGATA
TACTTTGCGATGGAGTATGTCCGGGGCGGCGAGCTCTTTGCCAGGGTAGCCAAGGGCCGGCTCAAGGAAGATGCTGCAAG
GAAGTACTTTCAACAGTTGATAGGGGCTGTGGACTTCTGCCACAGCCGTGATGTCTATCACCGGGACCTCAAGCCGGAGA
ACCTCCTCGTGGATGAGCATGGAAACCTCAAGGTGTCCGACTTCGGGTTGAGTGCCCTCAAGGAGTGTCAGAAGCAAGAC
GGGCTGCTGCACACAACGTGCGGCACACCTGCATATGTTGCGCCGGAGATAATCAACAAGAAGGGCTATGATGGAGAAAA
GGCAGACATATGGTCTTGTGGCGTCATACTTTTTGTTCTGCTTGCTGGTTACCTCCCATTCCAAGACTCAAATTTGATGG
AGATGTACCGGAAGATCAGCAAAGGTGATGTCAGGCATCCACAGTGGTTCAGTTCTGATGCCCGGAAGATTCTATCCAGG
CTGCTCGACCCAAATCCAAACACTAGGATCACCATGGACAAGCTGATTGAGCACCCGTGGTTCAAGAAAGGGTACAAACC
AGCAGTGATGCTGGGAACACCAACACCACGTGCCTCAAAGGATCTTAATGATGTCCAGGCTGCTTTCAGCACTGACCACA
AGGATGGTGAAGGCAAAAGGGCAGAACAACCAAATGGCGCACTGAAGCCAGCGAGCTTGAATGCGTTTGACATAATCTCC
CTCTCCAAAGGATTCGATCTTTCTGGCCTATTTGAGAAGGACCAAGAGCAGAAGTCGAACTCGCGGTTCATGACCCAAAA
ACCCGCATCAGCAATAGTGTCAAAGCTGGAGCAAATAGCCGAGACAGAATCCTTCAAGGTGAAGAAGCAGGACGGACTGG
TGACGCTGCAGGGATCCAAAGAAGGGAGGAAGGGGCAGCTTGCGATTGATGCGGAGATCTTTGAAGTGACTCCATCCTTC
TATGTTGTTGAGGTGAAGAAGTCGGCAGGAGACACATTGGAGTACGAACGGTTCTGCAAAATGGGCCTACGGCCTTCTCT
CAAGGACATCTGCTGGAACGGTCCGTCAGAGGAAAAGCTTCCATCAGTATCGGAGTCAGTACCTCCAACTCCGTCCTCCA
AGTCGACCAAAAGAAATGTCATTTAAGTGTGATATCTTCCGAGCTGCAATTACAATCTATTCTCCTCTCTCTTTCTTCCC
TCCTCAAAGAGCTGAGACTTTGCTCACT-----TGAGTATCAAGCTTTAGGGCTCTTTGTTAATCCTTTTT-GCAGTTTC
CCTTTTGTGGTAGCAATTGTAGTATATGGATTTCCTGTTTTGTTCACCAATAGAAGCACAAAAGGTGACAGTAACACTCT
TACAGTTGTTGCTCTGGGACAAGCATACCATCACCTGCAAAAAAAGATCTTTTAAGAACCAAAGACAGTATAGGATGATT
AAGTAGTTTCAAGTAAAATAATAATATCATAAATCACCGTGGCTGATAGCATAGAACAGATTCCTCTCTGTGTC------
--ATATTCCCGGTATGTTGTCTTGCGACTTGAGTACATCCTACTTGTTATGAAGTTCTAAGTAAAATACAGATGCATTAA
ACAAGTAGCACGGATTTGATGGAGAGCAGAAATAAAATTCTGAAGTGCTCAAAAATTATTTATTTACGTGTTATACTGAA
A---------------------------------TATACTAAAGCAGAAATAAATTACGGGACCAATATTATATATAACC
TGTTAACCATCAGAGTTGCTCGTACAAAATAATCAACCTCTTCACTTGGTGATGTTACAAATGCATGCAACTACCAGAAA
TGAATGATTCTGGCCAAACAACTTAGGATAAGAAATCTTCAGCAGAAACAAACCACAATCAACTTACATAT-AATCAAAA
TCATGTGAAATATATAAAGTGACATCACCAGGAGTCAAAGAAGCAGAGAACTTTATCTTTGTTGTCCATACACGGAAAAT
ATGAAATCACGCTCTTATGATGACATTATTGACTTATTGTTCTAATTGAGTAA---ACATTATCAAACCAGTTGACTAAA
AAACAACAAAC----TCCAAATAAAATTTGAACTGCATAGTTGGATGACCTTTCACCCAGCCAAACTTCTTGATATAACT
TTATTTGCGACAGATCCAAA
>chr3A_1022
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------CTCATGGGGCGGTACGAGCTGGGCCGCGTCCTGGGCAAGGGCACCTTCGCCAAGGTGTACCACGCGCGGCACCT
GCAGACCGGCGAGAGCGTGGCCATCAAGGTGCTCGACCGGGAGAAGGCCGTGCGGAGCGGCCTCGTCTCGCACATCAAGC
GCGAGATCGCCGTGCTCCGCCGCGTGCGCCACCCCAACATCGTGCACCTCTTCGAGGTCATGGCCACCAAGACCAAGATC
TACTTCGTCATGGAGCTCGTCCGCGGCGGCGAGCTCTTCTCCCGCGTCTCCAAGGGCCGCCTCAAGGAGGACATTGCGCG
CCGCTACTTCCAGCACCTCATCTCCGCCGTCGGATTCTGCCACACCCGCGGGGTCTTCCACCGGGACCTCAAGCCGGAGA
ACCTCCTCGTCGACGAGGCGGGCAACCTCAAGGTCTCCGACTTCGGCCTCTCCGCCGTCGCCGAGCCGTTCCAGCCAGAG
GGTCTCCTCCACACCTTCTGCGGCACGCCGGCCTACGTCGCGCCCGAGGTCCTCGCCCGCCGTGGATACGAAGGCGCCAA
GGCCGACATATGGTCCTGCGGCGTCATCCTCTTTGTTCTCATGGCCGGATACCTCCCTTTCCATGACCAGAACCTCATGG
CCATGTACCGTAAG------------------------------------------------------------------
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--------------------
>chr3D_1034
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------TACGAGCTGGGCCGCGTCCTGGGCAAAGGCACCTTCGCCAAGGTGTACCACGCGCGGCACGT
GCAGACCGGCGAGAGCGTGGCCATCAAGGTGCTCGACCGGGAGAAGGCCGTGCGGAGCGGCCTCGTCTCGCACATCAAGC
GCGAGATCGCCGTGCTCCGCCGCGTGCGCCACCCCAACATCGTGCACCTCTTCGAGGTCATGGCCACCAAGACCAAGATC
TACTTCGTCATGGAGCTCGTCCGCGGCGGCGAGCTCTTCTCCCGCGTCTCCAAGGGCCGCCTCAAGGAGGACATTGCGCG
CCGCTACTTCCAGCACCTCATCTCCGCCGTCGGCTTCTGCCACACCCGCGGGGTCTTCCACCGGGACCTCAAGCCGGAGA
ACCTCCTCGTCGACGAGGCGGGCAACCTCAAGGTGTCCGACTTCGGCCTCTCCGCCGTCGCCGAGCCGTTCCAGCCAGAG
GGTCTCCTCCACACCTTCTGCGGCACGCCGGCCTACGTCGCGCCCGAAGTCCTCGCCCGCCGTGGATACGAAGGCGCCAA
GGCCGACATATGGTCCTGCGGTGTCATCCTCTTTGTTCTCATGGCCGGATACCTCCCTTTCCATGACCAGAACCTCATGG
CCATGTACCGTAAG------------------------------------------------------------------
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--------------------
>chr2B_1049
--------------------------------------------------------------------------------
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---------------------------------ATGCTCGGGCAAGGGACCTTTGCCAAGGTCTACCATGCCCGTAACAT
CGAGACCTCGCAGAGTGTCGCCATCAAGGTGACTGACAAGGAGAAGGTTCTGAAGGGCGGGCTCACGGATCAGATCAAGC
GGGAGATCTCTGTGATGAAGCTGGTGAAGCACCCGAACATTGTTCAGATGTATGAGGTCATGGCGACCAAAACAAAGATT
TACTTTGTGTTGGAGCATGTGAAGGGTGGAGAGCTGTTCAACAAGGTTCAGAGAGGAAGGCTCAAGGAAGATGCTGCAAG
GAAGTACTTCCAGCAGCTGATCTGCGCAGTTGACTTTTGTCACAGCAGGGGCGTCTATCACCGTGATTTGAAGCCGGAGA
ACCTTCTTCTTGATGAGAACAGCAACCTGAAGGTTTCAGATTTCGGTCTCAGTACCATTTCTGAATGCAGAAGACTTGAC
GGGTTGCTCCACACATCCTGCGGCACGCCTGCTTATGTTGCTCCCGAAGTGATCAATAGGAAAGGCTATGATGGAGCCAA
GGCTGACATCTGGTCCTGTGGGGTGATCCTCTTTGTGCTTTTGGCTGGGTATCTCCCGTTCCAGGATAAGAATCTGATGA
ATATGTA-------------------------------------------------------------------------
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>chr2A_1049
--------------------------------------------------------------------------------
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---------------------------------ATGCTCGGGCAAGGGACCTTTGCCAAGGTCTACCATGCCCGTAACAT
CGAGACCTCGCAGAGTGTTGCCATCAAGGTGACCGACAAGGAGAAGGTTCTGAAGGGCGGGCTCACGGATCAGATCAAGC
GCGAGATATCTGTGATGAAGCTGGTGAAGCACCCAAACATTGTTCAGATGTATGAGGTCATGGCAACCAAAACAAAGATT
TATTTTGTGTTGGAGCATGTGAAGGGTGGAGAGCTGTTCAACAAGGTTCAGAGGGGAAGGCTCAAGGAAGATGCTGCAAG
GAAGTACTTCCAGCAGCTGATCTGCGCGGTTGACTTTTGTCACAGCAGGGGTGTCTATCACCGTGATTTGAAGCCGGAGA
ACCTTCTTCTTGATGAGAACAGTAACCTGAAAGTTTCAGACTTCGGTCTGAGTACCATTTCTGAGTGCAGAAGACTTGAC
GGGTTGCTCCACACATCCTGCGGCACGCCTGCTTATGTTGCCCCTGAAGTGATCAATAGGAAAGGCTATGACGGCGCTAA
GGCTGACATCTGGTCTTGTGGGGTGATCCTCTTTGTGCTTTTGGCTGGGTATCTCCCATTCCAAGATAAAAATCTGATGA
ATATGTATAAGAAGAT----------------------------------------------------------------
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>chr2D_1049
--------------------------------------------------------------------------------
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---------------------------------ATGCTCGGGCAGGGGACCTTTGCCAAGGTCTACCATGCCCGCAACAT
CGAGACCTCGCAGAGCGTTGCCATCAAGGTGACCGACAAGGAGAAGGTTCTGAAGGGCGGGCTCACGGATCAGATCAAGC
GCGAGATCTCTGTGATGAAGCTGGTGAAGCACCCAAACATTGTTCAGATGTATGAGGTCATGGCGACCAAAACAAAGATT
TACTTTGTGTTGGAGCATGTGAAGGGTGGTGAGCTGTTTAACAAGGTTCAGAGAGGAAGGCTCAAGGAAGATGCTGCAAG
GAAGTACTTCCAGCAGCTGATCTGCGCGGTTGACTTTTGTCACAGCAGGGGCGTCTATCACCGTGATTTGAAGCCTGAGA
ACCTTCTTCTTGATGAGAACAGCAACCTGAAAGTTTCAGATTTCGGTCTCAGTACCATTTCTGAATGCAGAAGGCTTGAC
GGGTTGCTCCACACATCCTGTGGTACGCCTGCTTATGTTGCTCCTGAAGTAATCAATAGGAAAGGCTATGACGGCGCCAA
GGCTGACATCTGGTCATGCGGGGTGATCCTCTTTGTGCTTTTGGCTGGGTATCTCCCTTTCCAAGATAAGAATCTGATGA
ATATGTA-------------------------------------------------------------------------
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--------------------
>SNPs
-------------------------------------S----------------------------------S-----S-
----------------------------S---------------------S-----------------------S-----
------------------------------------S------S------------------------------------
--------------------------------------------------------------------------------
-S----------------------S--------------------S-------------S--------------------
--------------------------------------------------S-------------S---------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------SS-SS-SSS------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------S--------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
------------------S-------------------------------------------------------------
-------------------------------------------S------------------------------------
----------------------------SSSSS--------------------------------------S--------
---------------------------------------------------------------------S----------
------------------------------------------------S-------------------------------
----------------------------------S---------------------------------------SSSSSS
SS----------------S-------------------------------------------------------------
----------S-------------S-----------------------------------------SSSSSS-SSSS-S-
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S---------------S-------------------------
--------------------------------------------------------------------S-----------
----------------------------------S---------------------------------------------
--------S-----------------------------------------------------------------------
-----------------------------------------------------SSS------------------------
-S----S----SSSS-----------------------------------------------------------------
--------------------
>forward_618
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--------------------------------------GGCTAGGATGTGTGGATGGG----------------------
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--------------------
>reverse_2339
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------TGGTCCGTCAGAGGAAAAGC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>forward_2300
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------GAGTACGAACGGTTCTGCAAG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>reverse_3155
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TTCTTCAGCAGAAACAAGCCAC------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
