>input_sequence_52679
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----ATGGGAAGCCCCAGCAACGACAAACCTATTCCTGGCCTGCACCAGCTGCCACGGCCAGCCATGGACAGAGGCAAGA
CCAAGGCCG---------ACCCCCATGCCGTGGCTGTTGCCGCCAAGCCGGACCTGCAGGACGACAGCGAGTCCGAGTCA
GATTCAGAGTCTATCGAGATCGCGGACCTCAAGAAGCGCATGTGGAAGGACCAGTTGCTTCTCATGAAGCTCGAGGGCAG
TCCGGGCCATGACCGGAGAGCAATAGCGCAGGGGCCGGGGACGGACCTGGCCCAA---GCAGAGA-AAG-----------
----AGGCAGAGATGCCCGAGTCACGGTACCGCCGCAAGGCGATGCTCCGGGCGCAGGATGGTGTTCTCCGGCACATGCT
CAGGATGATGGAAGCGTGCAACGCGCGGGGGTTCGTGTACGGCATCGTGGACGAGACCGGCATGCCCGTGTCCGGCTCCT
CCGACAGCCTCCGCGGCTGGTGGAAGGAGGACGTTGGGTTCGAGCGGACCGGGCCGACGGCCCTG---------------
---GCCGGTCCGTCGACGGCACTCGAAAGCCCGGG------GTCGTCGTTCCTCCACGGGCTCCTCGACATCCAGGACAG
CACACTGGGGTCTCTGCTCTCGGCGCTGATCCAGCACTGCGAGCCCCCGCAGCGGAGCTTCCCGCTGGACAGGGGACTGC
CGCCGCCGTGGTGGCCGACGGGCCAGGAGGTCTGGTGGGGCCTGCAGGGCAAGACCCAGGCCCATCAGGGTCCGCCGCCG
TACCGGAAGCCCCACGACCTGAAGAAGGCGTGGAAGATCTCCCTGCTGAGCGCGGTGATTAAGCACCTGAGCCCGCGCTT
CGACCAGATGCGCAAGCTCGTGTGGCAATCCAAGCGGCTGCAGCATAGGATGAGCGCCAGGGACGCCGAGACCTGGTCCA
GGGTCATCACCCAGGAGGAGGCGCTCGACCGCCACGTGCAGCGCGCCCTGCGGATCACGCCGCTCGATGAGGAGGA---C
GACGACGACGACAAGGAGCCGCGGGAAGCGGAACGCGACCTTCACGTCGACAAGCGCAAGCGAGAGGTCGGAAACGAGAG
CGCGGGAGGAAATGTCGACAGTGGCAGTGGCCGGGAGCTGGTTGCGCTGCCGGGCATTGACGTCGTAGCGGAGGCGGACC
GCAACTCCATCGACGAGCTCATGATGATGTACTACAGCTGTCTGCAGGGAACAGACGGTGGTGAGCAGGAGATCAAGGAC
GTGGTTGCTGGAGGTGGGGAGCAGAACAATACCTCTTGTGCTGAGACCGGCGTACTGGACGCGGCGACGGTGCGCGATGA
CATGTTCGACGATTTCTTGAGCGTTGCCGATGTGGTGGACACGAGTGACTTCCCGGGCAGTCCGATCTGGCACCGGGGGA
GTTCGGATTTGGATTAG---------------------------------------------------------------
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>chr2D_1_TraesCS2D01G320800
AAGAAACTTTCAAAAAGTGCACTGTGTAGACCGATC--TTTTCTACCACGAGCTCGTGAAATTTCCAAACACCTTGAAAT
TTTGCACGCACCTAGAAAATTCTCTCATCTTTCATGTGTAAAAAGTTCATCTTTTTTGAATTTGTTTGCTATTTTTCGAA
TTTACTGTTCACTGAGAGCAGGTGAACCTGGGCACCGTTTTCAATTATCATAATTTACTTACCTTCCGAACCAATTCCAT
TTTAATTTATTTATCAAATTTCTCATCAAAATATAAGGTAAATCAGGGACAGGATTTACTAAACATTTATTTACAGAATC
ACATTAATATGGACAGGCAAATCACAAGGTGGCATACTTGAATA------------------------------------
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-------------------------------------------------------------------TTATATCCAGTTG
CAATCTCACGGCTGAAAAAAAAAGAAAAAAAAAGCAGGACACTAAAGAATAGACAGCCTTTTCTCACAGGGATATTTTTG
TTGTCCAACTGACAAACTCGTCCGGCCACGCATTTATTGAATTCAGTGTCTCCTGAGATGGTGACACGAAATTCAATGGT
GCCGACTATATGAAAAGTCAAGGAGTACGTTTGTGCTTGCGTATGCTGCGCTCCGAGATCAATCAGCACAGGGTTTCGCA
TTTCCAAAAGAGATCAGCACAAGAAACAGCTGGGATATTTGGCTCATT-CGGATAAGAACTTTCTAGTGCATGCATGGAT
GCATCTTTG---TTAAACTAATGTTTTCTGG---------TGTACTGACGTCCATGCATCTTGTTCTTCTTCTCAGTTCT
CACTTCCATGTTTTGCTGCGTGTTTGTGTTGTCTGCTGGAAGAGAACAAACTTTACGCCGTGAGTCATGATCCAAACCAT
GTGCGCTCCAACGGGAGCTACCGAGCTCGTGAAGATACCGCCATGCACTACCCCACTGGTGGGCTCGCATCCCTAGACGG
TCAGCATTCTTCTACATTCTTCTGCAGCGCCTATAAATTCGATCGACGAGCCGCTACACCCGTAGCAGCTA------CGT
CCCTATGGGAAGCCCCAGCAACGACAAACCTATTCCTGGCCTGCACCAGCTGCCACGGCCAGCCATGGACAGAGGCAAGA
CCAAGGCCG---------ACCCCCATGCCGTGGCTGTTGCCGCCAAGCCGGACCTGCAGGACGACAGCGAGTCCGAGTCA
GATTCAGAGTCTATCGAGATCGCGGACCTCAAGAAGCGCATGTGGAAGGACCAGTTGCTTCTCATGAAGCTCGAGGGCAG
TCCGGGCCATGACCGGAGAGCAATAGCGCAGGGGCCGGGGACGGACCTGGCCCAA---GCAGAGA-AAG-----------
----AGGCAGAGATGCCCGAGTCACGGTACCGCCGCAAGGCGATGCTCCGGGCGCAGGATGGTGTTCTCCGGCACATGCT
CAGGATGATGGAAGCGTGCAACGCGCGGGGGTTCGTGTACGGCATCGTGGACGAGACCGGCATGCCCGTGTCCGGCTCCT
CCGACAGCCTCCGCGGCTGGTGGAAGGAGGACGTTGGGTTCGAGCGGACCGGGCCGACGGCCCTG---------------
---GCCGGTCCGTCGACGGCACTCGAAAGCCCGGG------GTCGTCGTTCCTCCACGGGCTCCTCGACATCCAGGACAG
CACACTGGGGTCTCTGCTCTCGGCGCTGATCCAGCACTGCGAGCCCCCGCAGCGGAGCTTCCCGCTGGACAGGGGACTGC
CGCCGCCGTGGTGGCCGACGGGCCAGGAGGTCTGGTGGGGCCTGCAGGGCAAGACCCAGGCCCATCAGGGTCCGCCGCCG
TACCGGAAGCCCCACGACCTGAAGAAGGCGTGGAAGATCTCCCTGCTGAGCGCGGTGATTAAGCACCTGAGCCCGCGCTT
CGACCAGATGCGCAAGCTCGTGTGGCAATCCAAGCGGCTGCAGCATAGGATGAGCGCCAGGGACGCCGAGACCTGGTCCA
GGGTCATCACCCAGGAGGAGGCGCTCGACCGCCACGTGCAGCGCGCCCTGCGGATCACGCCGCTCGATGAGGAGGA---C
GACGACGACGACAAGGAGCCGCGGGAAGCGGAACGCGACCTTCACGTCGACAAGCGCAAGCGAGAGGTCGGAAACGAGAG
CGCGGGAGGAAATGTCGACAGTGGCAGTGGCCGGGAGCTGGTTGCGCTGCCGGGCATTGACGTCGTAGCGGAGGCGGACC
GCAACTCCATCGACGAGCTCATGATGATGTACTACAGCTGTCTGCAGGGAACAGACGGTGGTGAGCAGGAGATCAAGGAC
GTGGTTGCTGGAGGTGGGGAGCAGAACAATACCTCTTGTGCTGAGACCGGCGTACTGGACGCGGCGACGGTGCGCGATGA
CATGTTCGACGATTTCTTGAGCGTTGCCGATGTGGTGGACACGAGTGACTTCCCGGGCAGTCCGATCTGGCACCGGGGGA
GTTCGGATTTGGATTAGTGGGTTAAAAGTTACAGTTTTGCTAAAACACATTTAAGAGCATGGCTAATAGAAGAGCCCACT
GCCGGCTCTATACCCATGCCACATTATTAAGAGCCTTCATGCAAGAATGCTTAGACTAGCCACAATAGGCAGTAACATAG
AGTAGTAACATGAGCATGTTACTACTCTATGTTACTATCTCTATAGTGGGAAGTAACATATGTGTAGTAACATGCAACAC
TTCATTTATTATGCTATAGACTCATCTTGCCTTGATATGTGTGATGTTACAGTAACTAGCTAAGTTACTAGCAGTGGCGG
ACCCAGAAATTCAAGTTAACCGGGGCGAACATTGAACGTCTAATTTTTTCGGTACAAATGCAACTCTATTCAACTAGAAC
TCATAACATTCAACAACAAAAGCATACAAAAGGTCTTCAAAACTACCCCTCTGATCCATATTATTGTTCTAAATCGGCGA
CAACTAAGAGCAACTCTAGCAGACCCTGCAAAAAGCCCCGTAAAATAACCGCCAAAATGTGGGTCGGCGCGGAAAATCCC
GCCCGAACAGACACCGCTAACGTGCCGGCCCGCAAAAAAATTTGAGGGACGCGGCAAAAACNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCCCTCTCCCCCTCGCCCCGCCGCTGGGCCGCCGCCCAAGATTCCGGCGGGAGCACGCCGA
AAGGCCGCCACATGAGGTTGCCCTCCGTCCCCCCCCCCTCCTGAGTCGGCGGGCCGG
>chr2B_1
AAGAAAC-TTTAAAAAATGCACTGTGCAGACCGAATTATTTTTCACCACGAGCTCGTGAAATGTCCAAACACATTGAAAT
TTTGCACGCACCTAGAAAATTCTCTCATCTTTCATGTTTAAAAAGTTCAGTTTTTTTGAATTTTTTAT-TATCTTTTAGA
ATTACTGTTCAC-GGGAGTAGATGAGCCTGCAGACCGTTTTGAATTCTATTA--------ACCTTCTGAACCAATTCCA-
TTTAATTTACCTATCAAACTTCTCATCAAAATATAAGGTAATCACAGGT-AGGATTTACTAAACATTTATTTACAGAATC
ACATTAATATGGACAGATAAATCACAAGTGACATACTA------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GTACTTAAATATTTATATGGAGTTG
CAAGG-CACGGCTGCAAAAAGAGCATGACA------------TAAAAAAGAGACAACCTTTCTTCGCTGGGATATTTT--
TTGTCGAACTGACAAACTCGTCCGGCCACGCATTTATTGAATTCAGTGTCTCCTTAGATGGTGACACGAAATTCAGTGGT
ACCGACTATATGAAAAGTCAAGGAGTACGTTTGTGCTTGCGTACGCTGCGCTCCGAGATCAATCAGCACAGGGCTTCGCA
TTTCCAAAAGAGATCAGCACAAGAAACAGCTGGGATATTTGGCTCCTTCCGCATAAGAACTCTCTAGTGCATGCATGGAT
GCCATCTTAGTATTAAACTAATGTTTCCTGGTGAACAGGCTGAGCTGACGTACATGCATCTTCTTCTTCT----------
CACTTTCATGTTTTGCTGCGTGTTCGTGTTGCCTGCTGGAAGAGAACAAC--TTACGCCGTGAGTCATGATCCAAACCAT
GTGCGCTCCAACGGGAGCTACCGAGCTCGTCAAGATACCGCCATGCACCACCCCACTGGTGGGTTCGCATCCCTAGACGG
CCAGCCTTCTTCTACATTCTTCTGCAGCGCCTATAAATTCGATCGACGAGCCGCTACACCCGTAGCAGCTAGGAGTACGT
CCCTATGGGAAGCCCCAGCAACGACAAACCTATTCCTGGCCTGCACCAGCTGCCACGGCCAGCCATGGACAGAGGCAAGA
CCAAGGCCG---------ACCCACATGCCGTGGCTGTTGCCGCCGAGCCGGACCTGCAGGACGAGAGCGAGTCCGAGTCA
GGTTCAGAGTCTATCGAGATCGCGGACCTCAAGAAGCGCATGTGGAAGGACCAGTTGCTTCTCATGAAGCTCGAGGGCAG
CCCGGGCCATGAACGGAGAGCAACCGGACAGAGGCCGGGCACGGACCTGGCCCAA---GCAGAGA-AGG-----------
----AGGCAGAGATGCCGGAGTCACGGTACCGCCGCAAGGCGATGCTCCGGGCGCAGGACGGCGTCCTCCGGCACATGCT
CAGGATGATGGAGGCGTGCAACGCGCGGGGGTTCGTGTACGGCATCGTGGACGAGACCGGCATGCCCGTGTCCGGCTCCT
CCGACAGCCTCCGCGGCTGGTGGAAGGAGGACGTTGGGTTCGAGCGGACGGGACCGACGGCCCTG---------------
---GCCGGTCCGTCGACGGCACTCGAAAGCCCGGG------GTCGTCGTTCCTCCACGGGCTCCTCGACATCCAGGACAG
CACACTGGGGTCCCTGCTCTCGGCGCTGATCCAGCACTGCGAGCCCCCGCAGCGGAGCTTCCCGCTGGACAGGGGACTGC
CGCCACCATGGTGGCCGACGGGCCAAGAGGTCTGGTGGGGCCTGCAGGGCGAGACCCAGGCGCACCAGGGCCCACCGCCG
TACCGGAAACCTCACGACCTGAAGAAGGCGTGGAAGATCTCCCTGCTGAGCGCGGTGATCAAGCACCTGAGCCCGCGCTT
CGACCAGATGCGCAAGCTCGTGTGGCAATCCAAGCGGCTGCAGCATAGGATGAGCGCCAGGGACGCCGAGACCTGGTCCA
GGGTCATCACCCAGGAGGAGGCGCTCGACCGCCAGGTGCAGCGCGCCCTGCGGATCACGCCGCTCGAAGAGCAGCCAGGC
GACGACGACGACAAGGAGCCGCGGGAAGCGGGACGCGACCTGCACGTCGACAAGCGCAAGCGAGAGGTTGGCAACGAGAG
CACGGGAGGAAATGTCGACAGTGGCCGTGGCCGGGAGCTGGTTGCGCTGCCGGGCATTGACGGCGTCGCGGAGGCGGACC
GCAACTCCATCGACGAGCTCATGAAGATGTACTACAGCTGTCTGCAGGGCACAGACGGCGGTGAACAGGAGATCAAGGAC
GTGGCGGCTGGAGGTGGGGAGCAGAGCAATACTTCCTCTGCTGAGACCGGCGTACTGGACGCGGCGACGGTGCACGATGA
CATGTTCGACGATTTTTTGAGCGTTGCCGATGTGGTGGACATGAGTGACTTCCCGGGCAGTCCGATCTGGCACTGGGGGA
GTTCGGATTTGGATTAGTGGGTTAAAAGTTA-------------------------------------------------
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>chr2A_1
AAGAAACTTTTAAAAAGTGCACTGTGTAGACCGATC--TTTTTTACCACGAGCTCGTGAAATGTCCAAACACCTTGAAAT
TTTGCACGCACCTAGAAAATTCTCTCATCTTTCATGTGTAAAAAGTTCATATTTTTTGAATCTGTTTGCTATTTTCTGAA
TTTACTGTTCACCGGAAGCAGATGAGCCTGGGCACCGTTTTGAATTATCGTAATTTATTTACCTTCTGAGCCAATTTCAT
TTTAATTTACTTCTCAAACTTCTCATCAGAATAT--------------------TTTAGTAAACATTAATTTACAGAATT
GCATTAATACGGACAGGTAAATCACAAGGTGATATACTTGAATGGGAATACCTAGAACTCATCTAAATGAGATATAATTT
GGTCTCATTCACTTGGAAATCAAAAACAAAAACAACCCATGTCAGCACACACGCATCTTATAACATCACATCCAATGACT
ATAAAAGGTGAATGAGACCAAATTATATCTCATCTAGATGAGTTCTGGCAAAACTGTACTTGAATATTTATATCCAGCTG
CAATCGCACGGCGAAAAAAAAGGAAAAAGAAAAGCAGGACACTAAAGAAGAGACAGCCTTTCTTCACAGGGATATTTTTG
TTGTCCAACTGACAAACTCGTCCGGCCACGCATTTATTGAATTCAGTGTCTCCTGAGACGGTGACACGAAATTCAATGGT
ACCGACTATATGAAAAATCAAGGAGTACGTTTGTGCTTGCGTATGCTGCGCTCCGAGATCAATCACCACAGGGCTTGGCA
TTTCCAAAAGAGATCAGCACAAGAAACAGCTGGGATATTTGGCTCATTCCGCATAAGAACTTTCTAGTGCATGCATGGGT
A-----------------------------GTGAATAGGCTGAACTGACGTACATGCATCTTCTTCTCCT----------
CACTTCCATGTTTTGCTGCGTGTTTGCGTTGTCTGCTGGAAGAGAACAAC--TTACGCCGTGAGTCGTGATCCAAACCAT
GTGCGCTCCAACGGGAGCTACCGAGCCCGTCAAGATACGGCCATGCACTACCCCACTGGTGGGCTCGCATCCCTAGACGG
GTAGCCTTCTTCTACATTCTTCTGTAGCACCTATAAAT----TCGACGAGCCGCTACACCCGTAGCAGCTA------CGT
TCCCATGGAAAGCCCCAGCAACGACAAACCTATTCCTGGCCTGCACGAGCTGCCACCGGCAGTCATGGACAGAGGCAAGG
CCAAGGCGGACCCTGCCAACCCCCACGCCGTGGCTGTTGCCACCGAGCCGGACCTACAGGACGACAGCGAGTCCGAGTCA
GGTTCAGAGTCTATCGAGATCGCGGACCTCAAGAAGCGCATGTGGAAGGACCAGTTGCTTCTCATGAAGCTCGAGGGCAC
CCCGGGGCACGAACGAAGAGCAACCGGGCAGAGGCCGGACACGGACCTGGCCCAA---GCAGAGA-AGG-----------
----AGGCAGAGATGCCGGAGTCACGGTACCGCCGCAAGGCGATGCTCCGGGCGCAGGACGGCGTCCTCCGGCACATGCT
CAGGATGATGGAGGCGTGCAACGCGCGGGGGTTCGTGTACGGCATCGTGGACGAGACCGGCATGCCCGTGTCCGGCTCCT
CCGACAGCCTCCGCGGCTGGTGGAAGGAGGACGTTGGGTTCGAGCGGACCGGGCCGACGGCCCTG---------------
---GCCGGCCCGTCGACGGCCCTCGAGAGCCCGGG------ATCATCGTTCCTCCACGGGCTCCTCGACATCCAGGACAG
CACGCTGGGGTCCCTGCTCTCAGCGCTGATCCAGCACTGCGAGCCCCCGCAGCGGAGCTTCCCGCTGGACAGGGGACTGC
CGCCGCCGTGGTGGCCGACGGGCCAGGAGTTCTGGTGGGGCCTGCAGGGCGAGACCCAGGCACATCAGGGCCCGCCGCCA
TACCGGAAGCCTCACGACCTGAAGAAGGCGTGGAAGATCTCACTGCTGAGCGCGGTGATCAAGCACCTGAGCTCGCGTTT
CGACCAGATGCGCAAGCTCGTGTGGCAATCCAAGCGGCTGCAGCATAGGATGAGCGCCAAGGACGCCGAGACCTGGTCCA
GGGTCATCACCCAGGAGGAGGCGCTCGACCGCCAGGTGCAGCGCGCCCTGCGGATCACGCCGCTCGAGGAGGAAGA---C
GACGAC------AAGGAGCCGCAGGAAGCGGAACACGGCCTGCACGTCGACAAGCGCAAGCGAGGGGTCGGCAACGAGAG
TGCGGGAGGTAATGACGACAGTGGTAGTGGCCGGGAGCTGGTTGCGCTGCCGGTCATTGACGGCGTCGCGGAGGCGGACC
GCAACTCCATCGACGAGCTCATGAAGATGTACTACAGCTGTCTGCAGGGAACAGACGGTGGTGAGCAGGAGATCAAGGAC
GTGGCGGCTGGAGGCGGGGAGCAGAGCAATACCTCTTCTGCTGAGACCGGCGTATTGGACGCGGCGACGGTGCGCGATGA
CATGTTCGACGATTTCTTGAGCGTTGCCGATGTGGTCGACATGAGTGACTGCCCGGGCAGTCCGATATGGCACTGGGGGA
GTTCGGATTTGGATTAGTGGGTTAATAGTTACTGTATTT-----------------------------------------
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>chr3B_1125
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---------------------------------------------------------AGGAGATCAGTGACTCCGAATCA
GGCTCTGAATCGCTCGAGATCTCCGACCTCAAGAAGCGCATGTGGAAGGACCAGATGCTGTTGACGAGGCTCGAGGGCCG
CACCGGC-------------------GCCAAGGGCGTGGCGCCGGCTCCAGCTGCCGGCGCATCTTCCTCGTCGTCGTCG
GGCCAAGAGGAGCCTCCCGACGTGCGGTGCCGCCGCAAGGCCATGCTGCGCGCGCAGGACGGCGTGCTCCGGCACATGCT
CAGGATGATGGAGGCCTGCAACGCGCGCGGGTTCGTGTACGGCGTCATCGACGAGGCCGGCGAGCCCATGTCCGGCTCCT
CCGACAGCCTCCGCGGCTGGTGGAAGGAGAACGTGAGCTTCGACCGCGCTGGCCCCATGGGCCTG---------------
---GCCGGCCCCATGGG------CGAGAGCCCGATCGCCCTGGCCTCCTCCCTCCATCGTCTCCAAGACATCCAAGACAG
CACGCTCGGATCCGTGCTCTCTGCGCTCATCCAGCACTGCGAGCCGCCGCAGAGGAGCTTCCCGCTGGAGCGCGGCCTGG
CGCCGCCGTGGTGGCCGACGGGGCACGAGCCCTGGTGGGGCACGCAGGGCGAGATGCAGGCCCACCAGGGCGTGCCACCG
TACCGGAAGCCGCACGACCTAAAGAAGGCGTGGAAGATCTCCCTGCTGAGCGCGGTGATCAAGCACATGAGCCCGCGCTT
CGACCAGATGCGCAAGCTCGTGTGGCAGTCCAAGCGGCTGCAGCAGAAGATGAGCGCCAAGGAGTCCGAGACCTGGTCCA
AGGTGCTTAGGCAGGAGGAGGCGCTCAGCAGCCGGCTAAAGAGCTCGCTGCGGATCACGCCGTTCGATCAGGAGGA---G
GAGGAAGAGGAGGAGGAG--------------------------------------------------------------
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>chr3D_1125
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---------------------------------------------------------AGGAGATCAGTGACTCCGAATCA
GGCTCTGAATCGCTCGAGATCTCCGACCTCAAGAAGCGCATGTGGAAGGACCAGATGCTGCTCACGAGGCTCGAGGGCCG
CGCCGGC-------------------GCCAGGGGCATGGCGCCGGCTCCAGCTGCCCGCGCATCCTCGTCGTCATCGTCG
GGCCAGGAGGAAACCCCCGACGTGCGGTGCCGCCGCAAGGCCATGCTGCGGGCGCAGGACGGCGTGCTCCGGCACATGCT
CAGGATGATGGAGGCCTGCAACGCGCGCGGGTTCGTGTACGGCGTCATCGACGAGGCCGGCGAACCCATGTCCGGCTCCT
CCGACAGCCTCCGCGGCTGGTGGAAGGAGAACGTGAGCTTCGACCGCGCCGGCCCAATGGGCCTG---------------
---GCCGGCCCCATGGG------CGAGAGCCCGGTCGCCCTGGCCTCCTCCCTCCATCGTCTCCAGGACATCCAAGATAG
CACGCTCGGATCCGTGCTCTCCGCGCTCATCCAGCACTGCGAGCCACCGCAGAGGAGCTTCCCGCTGGAGCGCGGCCTGG
CGCCGCCGTGGTGGCCGACGGGGCACGAGCCCTGGTGGGGCACGCAGGGCGAGATGCAGGCCCACCAGGGCGTGCCGCCG
TACCGGAAGCCGCACGACCTGAAGAAGGCGTGGAAGATCTCCCTGCTCAGCGCGGTGATCAAGCACATGAGCCCGCGCTT
CGACCAGATGCGCAAGCTCGTGTGGCAGTCCAAGCGGCTGCAGCAGAAGATGAGCGCCAAGGAGTCCGAGACCTGGTCCA
AGGTGCTTAGGCAGGAGGAGAAGCTTAGCAGCCGGCTAAAGAGCTCGCTGCGGATCACGCCGTTCGATCAGGAGCA---C
GCGGATGAGGACGAGGA---------------------------------------------------------------
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>chr3A_1125
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---------------------------------------------------------AGGAGATCAGCGACTCCGAATCA
GGCTCTGAGTCACTCGAGATCTCCGACCTCAAGAAGCGCATGTGGAAGGACCAGATGCTGCTCACGAGGCTCGAGGGCCG
CGCCGGC-------------------GCCAGGGGCGCGGCGCCGGCTCCAGCTGCCCGCGCATCCCCCTCTTCGTCGTCG
GGCCAGGAGGAACCCCCCGACGTGCGGTGCCGCCGCAAGGCCATGCTGCGCGCTCAGGACGGCGTGCTCCGGCACATGCT
CCGGATGATGGAGGCCTGCAACGCGCGCGGGTTCGTGTACGGCGTCATCGACGAGGCCGGCGAGCCCATGTCCGGCTCCT
CCGACAGCCTCCGCGGCTGGTGGAAGGAGAACGTGAGCTTCGACCGCGCCGGCCCAATGGGCCTG---------------
---GCCGGCCCCATGGG------GGAGAGCCCGGTCGCCCTGGCCTCCTCCCTTCATCGTCTCCAGGACATCCAAGACAG
CACGCTCGGATCCGTGCTCTCCGCGCTCATCCAGCACTGCGAGCCGCCGCAGAGGAGCTTCCCGCTGGAGCGCGGCCTGG
CGCCGCCGTGGTGGCCGACGGGGCACGAGCCCTGGTGGGGCACGCAGGGCGAGATGCAGGCCCACCAGGGCGTGCCGCCG
TACCGGAAGCCGCACGACCTGAAGAAGGCGTGGAAGGTCTCCCTGCTCAGCGCGGTGATCAAGCACATGAGCCCGCGCTT
CGACCAGATGCGCAAGCTCGTGTGGCAGTCCAAGCGGCTGCAGCAGAAGATGAGCGCCAAGGAGTCCGAGACCTGGTCCA
AGGTGCTTAGGCAGGAGGAGAAGCTTAGCAGCCGGCTAAAGAGCTCGCTGCGGATCACGCCGTTCGATCAGGAG------
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>chr6D_1157
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---------TCTGTCGAGATCTCTGACCTCAAGAAGCGCATGTGGAAGGACCAGATGCGCCTCATGAAGCTCGAGGGCCG
CGCCGGC-------------------GCCAGGAGCGGTGCGCCGGCCGGGCGGCA---GGAGGACCAGG-----------
----AGGAGGACGGTCCCGAGGCGCGGTGCCGGCGGAAGGCGATGCTGCGCGCGCAGGACGGCGTGCTCCGGCACATGAT
GAAGATGATGCAGTCCTGCAACGCGCGCGGGTTCGTGTACGGCGTCATCGACGAGGCCGGCGAGCCCACGTCCGGCTCCT
CCGACAGCCTCCGCGGCTGGTGGAAGGACAAGGTAGTCTTCGACCGCACGGGCCCGATGGCCCTGAGTCTGACCGGCAGC
TCCGCCGCCGACGGTAG------CACCAGCCCGCTGGGCCTGGCCTCCTACCTGCATCGCCTCCAGGCCATCCAGGACAA
CACGCTGGGCTCCATGCTCTCGGCGCTCCTCCAGCACTGCGAGCCGCCGCAGCGCAACTTCCCGCTGGAGCGCGGCCTGG
CGCCGCCGTGGTGGCCGACGGGGAAGGAGCTGTGGTGGGGCACGCAGGGCGAGACGCAGGCCCACCAGGGCGCGCCGCCG
TACCGGAAGCCGCACGACCTGAAGAAGGCGTGGAAGGTGTCCCTGCTGAGCGCGGTGATCAAGCACATGAGCCCGCGCTT
CGACCAGATGCGCAGGCTCGTGTGGCAGTCCAAGCGGCTGCAGCACAAGATGAGCGCCAAGGAGTCCGACACCTGGTCCA
AGGTGCTCCGGCAGGAGGAGGCGCTCAGCGGCCGGCTCAAGAGCTCGCTTCGGATCACGCCCCTCGAGGACGACGA---C
GACTACGACGGCGAGGA---------------------------------------------------------------
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>chrUn_1161
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-------------TCGAGATCTCCAACCTCAAGAAGCGCATGTGGAAGGACCAGATGCGCCTCATGAAGCTCGAGGGCCG
TGCCGGC-------------------GCCAGGAGCGGTGCGCCGGCCCGGCGGCAGCTGGAGGACCAGG-----------
----AGGAGGACGGTCCCGAGGCGCGGTGCCGGCGGAAGGCGATGCTGCGCGCGCAGGACGGCGTGCTCTGGCACATGAT
GAAGATGATGCAGTCCTGCAACGCGCGCGGGTTCGTGTACGGCGTGATCGACGAGGCCGGCGAGCCCACGTCCGGCTCCT
CCGACAGCCTCCGCGGCTGGTGGAAGGACAAGGTCGTCTTCGACCGCAGGGGCCCGAAGGCCCTCATC---ACCGGCAGC
TCCGCCGCCGCCGGTAG------CAGCAGCCCGCTGGGGCTTGCCTCCTACCTCCACCGCCTCCAGGGCATCCAGGACAA
CACGCTGGGCTCGGTGCTCTCGGCGCTCCTCCAGCACTGCGAGCCGCCGCAGCGCAACTTTCCCCTGGAGCGGGGCCTGG
CGCCGCCGTGGTGGCCGACGGGGAAGGAGCCGTGGTGGGGCACGCAGGGCGAGACGCAGGCCCACCAGGGGGCGCCGCCG
TACCGGAAGCCGCACGACCTGAAGAAGGCGTGGAAGGTGTCCCTGCTGAGCGCGGTGATCAAGCACATGAGCCCGCGCTT
CGACCAGATGCGCAGGCTCGTGTGGCAGTCCAAGCGGCTGCAGCAGAGGATGAGCGCCAAGGAGTCCGACACCTGGTCCA
AGGTGCTCCGGCAGGAGGAGGCGCTCAGCGGCCGGCTCAAGAGCTCGCTTCGGATCACGCCCCTCGACGACGACTA---C
GACGACGGCGA---------------------------------------------------------------------
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>chr6B_1161
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-------------TCGAGATCTCCGACCTCAGGAAGCGCATGTGGAAGGACCAGATGCGCCTCATGAAGCTCGAGGGCCG
CGCCGGG-------------------GCCAGGAGCGGTGCGCCGGCCGGGCGGCA---GGAGGACCGGG-----------
----AGGAGGACGGTCCCGAGGCGCGGTGCCGGCGGAAGGCGATGCTCCGCGCGCAGGACGGCGTGCTCCGGTACATGAT
GAAGATGATGCAGGCCTGCAACGCGCGCGGGTTCGTGTACGGCGTGATCGACGAGGCCGGCGAACCCACGTCCGGCTCCT
CCGACAGCCTCCGCGGCTGGTGGAAGGACAAGGTCGTCTTCGACCGCACGGGCCCGAAGGCGCTGATC---ACCGGCAGC
TCCGCCGCCGACGGTAG------CAGCAGCCCGCTAGGCCTGGCCTCCTACCTCCACCGCCTCCAGGGCATCCAGGACAA
CACGCTGGGCTCCGTGCTCTCGGCGCTCCTCCAGCACTGCGAGCCGCCGCAGCGCAACTTCCCCCTTGAGCGCGGCCTGG
CGCCGCCGTGGTGGCCGACGGGGAAGGAGCCGTGGTGGGGCACGCAGGGCGAGACGCAGGCCCACCAGGGCGCGCCGCCG
TACCGGAAGCCGCACGACCTGAAGAAGGCGTGGAAGGTGTCCCTGCTGAGCGCGGTGATCAAGCACATGAGCCCGCGCTT
CGACCAGATGCGCAGGCTCGTGTGGCAGTCCAAGCGGCTGCAGCACAGGATGAGCGCCAAGGAGTCCGACACCTGGTCCA
AGGTGCTCCGGCAGGAGGAGGCGCTCAGCGACCGGCTCAAGAGCTCGCTTCGGATCACGCCCCTCGACGACGACTA---C
GACGGCGA------------------------------------------------------------------------
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>SNPs
----------S-------------------------------S-------------------S-----------------
--------------------------------------------------S-------------------------S---
------------S-S------S---S---------------S-------S-------S--------S-------------
---------S--------S----------------------SSSSS--SS------------------------------
-----------------S-------------SS----------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S----------------SS----S--------------------S-----------SS-----------------
--------------------------------------------------------------------------------
S------------------------------------------------------------------------S------
---------------------------------------------------S----------------------------
--SSSS--S-----------------S---------------S--------S----------S-------SSSSSSSSSS
-------------------------------------------------SSS----------------------------
------------------------------S-------------------------------------------------
S----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
-S------------------------------------------------------------------------------
------------S----------SS-S------------S---------------------------S------------
-----------------------------------------------------------S--S--S--------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------S-------------------S---------
-----------S-----------------------------------------------S--------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
-----------------------------------------S-----------------------------S--------
--------------------------------------------------------------S---S-------------
------------------------S-------------------------------------------------------
----SS-------------------S-----------S------------------------------------------
-----------------------------------------S-------------------------------S------
--------------------------------S--S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_353
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CAGGCAAATCACAAGGTGGC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>reverse_1580
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TGGTGTTCTCCGGCACATG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>forward_1465
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GCCATGACCGGAGAGCAATA-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>reverse_2976
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TTAACCGGGGCGAACATTGA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
