>input_sequence_52646
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------CCCTGCAGGTAGCCCTCCTCGCCCGAGTTCTTCCTCTTCGCCGGAGCTCACCC
AGTTTGGTGATTGTCTCGCTCGATTTGCAGTTCCGCCGCCCCATGGCCATGG------AGGAGGAGGAGATATCTGGGAA
GGAGTTGTTGAGGCCGGACAA------CTCTCTTGCGGAGGAGGAGGCGGCGGCGGCGGCCAGTCGACTCACCGACGACC
TCATCGTAGAGATCCTGTCCCGGCTCCCCTTCAGGTCCGTCTGCCGTTTCAAGTGCGTCTCTAAGCCCTGGCGCGACCTC
ATCGCCCACCCCGCCCACCGCAAGAAGCTGCCCCAGACCCTCGCCGGCGTCCTCTACACCAACATTACCGGTGCCGGCGG
CTATCGCTACCACCTGGCCGGCCTCTCGGCCGAGGCCGACGGTCTTGATCTCGACCCTTCACTCACGTTCCTGCCACATA
CGGAGTACAGGGACTTCGGGCTGGTGCGCGCCTGCAATGGCCTCCTCCTCTGCTCCTACGAACCGGAGGAGGGAAC---C
GTCCGTTTCGTCGTCTGCAATCCCGCCACCCAGAGGTGGACGGAGCTGCCCCCTCGCC------CGCGGCCAAACACATG
CCGCTATTACCAGCAGTTCCATCTGGCTTTCGACCCAGCAGTCCCATCCCATTTCCACGTTTTTGATTTCGAGCGCACCG
ACAACTTGAGC---ATCACAGGAGTGAGCATCTACTCGTCCAGAACCGGGGCCTGGTGCCAGAGTGATA---CTGGATTG
GTTGAGGATGTTGTAATGGTAGGTCAAAGTGTCCTGGTTGGAGGTATGCTGCACGTTGTGGGCAACCTGCTTGTGGCTGC
AGACAGCAACAATTGGGAAGACCAGACTGTGTTGGTGGCCTTGGACATGGAGGGCAAGGAGTGGAAGACAATCTCCGTGC
CACGCGGCCGGGATTATGGTATAGTTGGGTGGTCACAGGGGTGCCTGCACTATGCTGCTATATCTCCAGCTCCTCTCACT
GTCGGTGTTGACGACGATGAGGGTTCACTCAACATGGCTGAAGAGGTAGCTATCTGGTGCCTTGAGGATTATGATAAACA
GCAATGGGCCCTGAAGCATAGTTTCAGAATCGATAAGGTGCTGAACCTAAATGAGGTGGACTACCGGCTGGTTGGGTTCC
ATCCCGATCACGACACCTTCTTCTTTGTCAGCAAGGGTATTTGGGAGGGCGAAAA---------GGCTTCATTGGTGTCG
TGGGACATGCGGCGTCGCCAACTCTCTTGTGTTCTCCATCTCGAGAAAAGCAGTGTAGCGCCGTATCTGCCTTATGTTCC
TCTCTTCTCATCGGAGCCACTACCAGATGCAGATGGGCACTAATTCAGTTCGCTTTGTGCTTGGGCTTACTCTTGT-CAA
TGGAATAATCATGTATGTGTACA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr1D_1_TraesCS1D01G012200
TAGATAACACCTAAAAGGGAAATTCGACTGGGAAAGAGTCCAAGTTAGACCTCTTTCCCTTTCAAAATTTAGAGCATATT
TTCACTGTTCAAAATTCAAGTTTTTACCAGCAATTAATCTGATAGTATGTAAATTATATGTTACACAAAATTGGTAATAT
TGCACTCCTGTCCGGCGGTGCTTTCTTACAAGTTATAACTACTATACTTCCCTCTATCAAGAAAATTTAGAAAGAAATTA
CAGCCAAATTTCACAATTGAACAGTCCAAATTCAGAATACATTTGAAAAAACGGAGGGTTCTCAACGGTTAGTCTTGCAC
GTCCAAAAAAAATAAAGAAAGGGATGCATCCAAATGGATTTGTTGGCAGGAAAA-TAAAAATATCTCGAACCACTTTTGT
ATATATGTGGGCCATCATCGAACTCCCCTCACCAACTCACTCCGTGCTTAACTTAT-AAAAAATA-TACAGTAACATTTT
ATTGCTTGACATCAAACAATTTATTTTTAGGCTTACTGGTTCGCAATTTAAGATGATCACAATTTTTT-TACAAAAAAAG
G--CAACTAAGAATTACCGTGAGCATTTTAAAATTCTCAAACATTTTTCAAATGCATGAACATTTTTCATATATATATAT
ATATATATATATATTTTA---TTCCACCATTTTTTATAATTTTTAAGAAGTTTGTAGCTGTTTATTTTTTTTGCTGAACC
AGTAGAGCAGCAAGAGCAAAAA----------------------------------------CACGAGTGGAAAGACATG
------------------AGAAACGAGCGAAGCCACTAGTGGGCGATCGAACTAGAGCTACTGGGCCGCGCGGCCCACGC
GTGCTAAGGCTGGGCGAAATTACGGCTGATTGCCACTGCAAAACGTACTTGTTCAGTCGCGCTGTAACCCTAGCGCCGCC
AAACCCGGCTGCACCGCACCCCGTCGCCGGCCGGCCGGCCGCCCATCATCCCCGCCGCACCTCTCCCCCGACGCCCTATC
CCGTCGCCCACCCCGACACCAGCAACGCCCTGCAGGTAGCCCTCCTCGCCCGAGTTCTTCCTCTTCGCCGGAGCTCACCC
AGTTTGGTGATTGTCTCGCTCGATTTGCAGTTCCGCCGCCCCATGGCCATGG------AGGAGGAGGAGATATCTGGGAA
GGAGTTGTTGAGGCCGGACAA------CTCTCTTGCGGAGGAGGAGGCGGCGGCGGCGGCCAGTCGACTCACCGACGACC
TCATCGTAGAGATCCTGTCCCGGCTCCCCTTCAGGTCCGTCTGCCGTTTCAAGTGCGTCTCTAAGCCCTGGCGCGACCTC
ATCGCCCACCCCGCCCACCGCAAGAAGCTGCCCCAGACCCTCGCCGGCGTCCTCTACACCAACATTACCGGTGCCGGCGG
CTATCGCTACCACCTGGCCGGCCTCTCGGCCGAGGCCGACGGTCTTGATCTCGACCCTTCACTCACGTTCCTGCCACATA
CGGAGTACAGGGACTTCGGGCTGGTGCGCGCCTGCAATGGCCTCCTCCTCTGCTCCTACGAACCGGAGGAGGGAAC---C
GTCCGTTTCGTCGTCTGCAATCCCGCCACCCAGAGGTGGACGGAGCTGCCCCCTCGCC------CGCGGCCAAACACATG
CCGCTATTACCAGCAGTTCCATCTGGCTTTCGACCCAGCAGTCCCATCCCATTTCCACGTTTTTGATTTCGAGCGCACCG
ACAACTTGAGC---ATCACAGGAGTGAGCATCTACTCGTCCAGAACCGGGGCCTGGTGCCAGAGTGATA---CTGGATTG
GTTGAGGATGTTGTAATGGTAGGTCAAAGTGTCCTGGTTGGAGGTATGCTGCACGTTGTGGGCAACCTGCTTGTGGCTGC
AGACAGCAACAATTGGGAAGACCAGACTGTGTTGGTGGCCTTGGACATGGAGGGCAAGGAGTGGAAGACAATCTCCGTGC
CACGCGGCCGGGATTATGGTATAGTTGGGTGGTCACAGGGGTGCCTGCACTATGCTGCTATATCTCCAGCTCCTCTCACT
GTCGGTGTTGACGACGATGAGGGTTCACTCAACATGGCTGAAGAGGTAGCTATCTGGTGCCTTGAGGATTATGATAAACA
GCAATGGGCCCTGAAGCATAGTTTCAGAATCGATAAGGTGCTGAACCTAAATGAGGTGGACTACCGGCTGGTTGGGTTCC
ATCCCGATCACGACACCTTCTTCTTTGTCAGCAAGGGTATTTGGGAGGGCGAAAA---------GGCTTCATTGGTGTCG
TGGGACATGCGGCGTCGCCAACTCTCTTGTGTTCTCCATCTCGAGAAAAGCAGTGTAGCGCCGTATCTGCCTTATGTTCC
TCTCTTCTCATCGGAGCCACTACCAGATGCAGATGGGCACTAATTCAGTTCGCTTTGTGCTTGGGCTTACTCTTGT-CAA
TGGAATAATCATGTATGTGTACACCTGCACTTCTTAATCTTCTTGAATTGTGTTACTCACTTTGTTCCGTGGGGCTAAAT
TATAC----TACTGTTATCCAGCTTTCTTGGCCATTGCATGTCGTGATTGCGGTTGTACTGAATCCTAGTA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TTAGTGAGTGCTACTTGTGAACTTTGTTTTGTTCCTTTTTAGTTATT
ATATGTTTGCTGATGCTTACGAATTCAGTCTTGTTTCGTAGATGAATTCGGTCTTATGCAGCAGACAAGGTCATGAAATA
AGTGCATAATGCAAACTTTGCTGAGAAGTTTTCTTGCTTCGGTGCATAT----GTGCATTTGGTTTGTTTCACTTATTCT
TCAGGTGATAAACTAACGGTTACCGTGTAGGGCTGTTCTTCAAGTATAGTGGTATAAAAGGTGCTGGGATAGTCCTTTTT
GCGAGCCAAAATTTATCATATCACTTTAAACTTTCAGAAGAAATATTCATAAGAATTTTGCACAG---GGGGTTTGACAG
GTTG-------------AAGCTGACCTGTATTGGGAAAACTGATCTCCATTCAAAAAGGACAG--T---AAAAATAGCAT
AATTTATTCATGATAATTTCGACCACATATTCACCATTAATGAATTGTTAGAAGGGGATGCTCTCACTTCTTATTATATG
CCTAAGGCTACCAGTAGAAAGAAAAAGGAAATCCTTTGTTTAGGAAGTAATGAGAATCTGGTGCAGGGGGATAAAGACCT
TTTATTATATATATATGCCACTTCCTTTCATAAGAATTTGTTTGGTCCTTCTGAATGTCTAAAGAATATTACCTTGGATA
TTGATATGCAATCTGTTTTAAATGATTTAGACAAAGAGTTGTTGGATAGAAATTTTACTCTAGAAGAAATTAGAGTGTCT
GTTTACAGTATGAAACATAACACTGCTAGCAACAGAGTTTTATCAGCACTTGGTGGGACTTATTAAGGGGTGATCTTTTA
GTTCTCTTTCAGGATTTCTATGATAACAAATTGGATTTAGCTAGGTTCAATTAT
>chr7B_342
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GGATGCATCCAAATGGATTTGTTGGCGGGACAAATAAAAATATCTAGAACCAGTTTTAT
ATATGTGTGGGCCATTATCCAACTACCCTCACCAACTCACTCCGCGCTTAACTTAT-AAAAAAAATTACAATAACATTTT
ATTGTATGACATCAAATAATTTATTTTTACGCTTAACAGTTCGCAATTTAAGGTGATCATGG---TTTTTACAAAAAAAT
AGCCAACTAAGAATTACCATGAACATTTTAAAATTCTCAATTTTTTTCCAAATGCATAAACATTTTTCATATTTATAT--
-------------TTTTT---GTCCACCATTTTTTATAAGTTTTTTGAAAATCGGTAGCTGATTTATTTTTTGCTGAACC
AGTAGAGCAGCAGGAGCAAAAAAAT----------------------------------------GAGTGAAAAAACATG
AGAAAAAGCGTGTGAAAAAGAAACGAGCTCAGCCACTAGTGGGCGATCGAACTAGAGCTACTGGGCCGCGCGGCCCACGC
GTGCTAAGGTTGGGCGAAATTACGGCTGATTGCCACTGCAAAACGTACTTGTTCAGTCGCGCTGTAACCCTAGCGCCGCC
AAACCAGGCTGCACCGCACCCCGTCGCCGGCCGGCCGGCCGCCCATCATCCCCGCCGCACCTCTCCGCCGACGCCCTATC
C-GTCGCCCACCCCGACGTCAGCAACGCCGTGCAGGTAGCCGTCCTCGCCCGATCTCTTCCTCTTCGCCGGAGCTCGCCC
AGTTTGATGATTTTCTCGCTCGATTTGCAGTTCCGCCGCC------CCATGG------AGGAGGAGGAGATATCTGGGAA
GGAGTTTTTGAGGCCGGACAACTCTCTCTCTCTTGCGGAGGCGGAGGCGGCGGCCGCGGCCAGTCGACTCACCGACGACC
TCATCGTGGAGATCCTGTCCCGGCTCCCCTTCCGGTCCGTCTGCCGTTTCAAGTGCGTCTCTAAGACCTGGCGTGACCTC
ATCGCCCACCCCGCCCACCGCAAGAAGCTGCCGCAGACCCTCGCCGGCGTCCTCTACACCAACATCACCGGTGCCGGCGG
CTATCGCTACCACCTGGCCGGCCTCTCGGCCGAGGCCGACGGTCTTGATCTTGACCCTTCACTCACGTTCCTGTCACATA
CGGAGTACAGGGACTTCGGGCTGGTGCGCGCCTGCAATGGCCTCCTCCTCTGCTCCTACGAACCGGAGGAGGGAAC---C
GTCCGTTTCGTCGTCTGCAATCCCGCCACCCAGAGGTGGACGGAGCTGCCCCCTCGCC------CGCGGCCAAACACATG
CCGCTATTACCAGCAGTTCCATCTGGCTTTCGACCCAGCAGTCCCGTCCCATTTCCACGTTTTTGATTTCGAGCGCGCCG
ACAACTTGGGC---ATCACAGGAGTGAGCATCTACTCGTCCAGAACCGGAGCCTGGAGCCAGAGTGATA---CTGGATTG
GTTGAGGATGTTGTAATGGTAGGTCAAAGTGTCCTGGTTGGGGGTATGCTGCACGCTGTTGGCAACCTGCTTGTGGGTGC
AGACAGCAACAATTGGGAAGACAAGACTGTGCTGGTGGCTGTGGACATGGAGGGCAAGGAATGGAAGACAATCTCCGTGC
CATGCGGCCGGGATTATGGTATAGTTGGGTGGTCACAGGGGTGCCTGCACTATGCTGCTATATCTCCAGCTCCTCTCACT
GTCGGTGTTGACGACGATGAGGGTTCACTCAACATGGCTGAAGAGGTAGCTATCTGGCGCCTTGAGGATTATGATAAACA
GCAACGGGCCCTCAAGCATAGTTTCAGAATCGATAAGGTGCTGAACCTAAATGAGGTGGACTACCGGCTGGTTGGGTTCC
ATCCCGATCACGACACCTTCTTCTTTGTCAGCAAGGGTATTTGGGAGGGCGAAAA---------GGCTTCATTGGTGTCG
TGGGACATGCGGCGTCGCCAACTCTCTTGTGTTCTCCATCTCGAGAAAAGCAGTGTAGCGCCGTATCTGCCTTATGTTCC
TCTCTTCTCATCGGAGCCACTAGCAGATGCAGATGGGCACTAATTCAGTTCGCTTTGTGCTTGGGCTTGCTCCGAT-CAA
TGGAATAAGCATGTATGTGTACACCTGCACTTCTTAATCTTCTTGAATTGTGTTAGTCACTTTGTTCTGTGGGGCTAAAT
TATAC----TACTGTTATCCAGCTTTCTTGGCCATTGCATGCCGTGATTGCGGTTGTACTGAATCCTAGTA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TTAGTGAGTGCTACTTGTGAACTTTGTTTTGTTCCTTTTTAGTTATT
ATATGTTTGCTGATGCTTACGAATTCAGTCTTGTTTCGTAGATGAATTCGGTCTTATGCAGCAGACAAGGTCATGAAATA
AGTGCATAATGCAAACTTTGCTGAGAAGTTT-CTTGCTTTGGTGCATAT----GTGCATTTGATTTGTTTCACTCATTCA
TCAGGTGACAAACTAACGGTTACCATGCAGGGTTGTTCTTCAAGTATAGTGGTATAACAGATGTTGGGATAGTCCTTATT
GCGACACGAATTTTATCATAGCACTCAA---TTTCAGCAGAAATATACGGAAGAAATTTTGT--------------ACAG
GTTGGTTTGACAGGTTTAAGCTGACCTATATTGGGAAGATTGCTCTCCAGTTAACACGGACAA--TGTAAAACATAGCAT
AATTTAACCATGACAATTT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr1A_399
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
ATATATGGGGGCCATCATCCAACTACCCTCACCAACTCACTCCGTGCTTAAATTACAAAAATCAATTACAGTAACATTTT
ATTGTATGACATCAAACAATTTATTTTAAGGCTTACTGGTTCGCAATTTAAGATGATGACAATATTTTTTACAAAAAAAG
G--CAACTAAGAATTACTGTGAGCATTTTAAAATTCTCAAACATTTTTCAGATGCATGAAAATTTTTCATATTTATAT--
-------------TTCTTTTATTCCACCATTTTTTATAATTTTTAAGAAAATCGGTAGCTGTTTTTTTTTTTGCTAAACC
AGTAGAGCTGCAAGAGCAAAAACACGAGTTTTTTTTGAGACATACAAAAAAAAGAAAAAAAACACGAGTGGAAAGACATG
AGAAACGAGCGAA----------------------------------------------------------GGCCCACGC
GTGCCAAGGTTGGGCCGAATTACGGCTGATTGCCACTGCAAGACGTACTTGTTCAGTCGCGCTGTAACCCTAGCGCCGCC
AAACCAGGCTGCACCGCACCCCGTCGCCGGCCGGCCGGCCGCCCATCATCCCCGCCGCACCTCTCCGCCGA---------
----CGCCCACCCCGACACCAGCAACGCCCTGCAGGTAGTCCTCCTCGCTCGAGCTCTTCCTCTTCGCCGGAGCTCACCC
AGTTTGGTGATTGTCTCGCTCGATTTGCAGTTCCGCCGCC------CGATGGCTATGGAGGAGGAGGAGATATCTGGGAA
GGAGTTGTTGAGGCCGGACAA------CTCTCTTGCGGAGGAGCAGGAGGCGGC--CGGCCAGTCGACTCACCGACGACC
TCATCGTGGAGATCCTGTCCCGGCTCCCCTTCCGGTCCGTCTGCCGTTTCAAGTGCGTCTCTAAGCCCTGGCGCGACCTC
ATCGCCCACCCCGCCCACCGCAAGAAGCTGCCCCACACCCTCGCCGGCGTCCTCTACACCACCATCACCGGTGCCGGCGG
CTATCGCTACCACCTGGCCGGCCTCTCGGCCGAGGCCGACGGTCTTGATCTCGACCCTTCACTCACGTTCCTGCCACATA
CGGAGTACAGGTACTTCGGGCTGGAGCGCGCCTGCAATGGCCTCCTCCTCTGCTCCTACAGACCAGACGCTGAAAC---A
GTCCGTTTAGTCGTCTGCAATCCCGCCACCCGGAGGTGGACGGAGCTGCCCCCTCGCCTGCAGCCGCGGCCAAACACATG
CCACACGG------AGCTCCATCTGGCTTTCGATCCAGCAGTCCCGTCCCATTTCCACGTTTTTGATTTCGAGCACAATG
TCAACCGGAGCGGAATCACAGGAGCGAGCATCTACTCGTCGAGAACCGGAGCCTGGAGCCACAGGGATGCTGCTGGATTG
GTTGACGAAATTTATCTGACCCGTCACAGTGTCATGGTTGGCGGTATGCTGCACGTTGTCGGCAACCTGTCGGTGGTTGC
CGACAGCAACGATTGGTATGACAAGACTGTGCTGGTGGCTGTGGACATGGAGGGCAAGTTGTGGAAGACCATCTCCGTGC
CACGCGGCCAGTATTATGGGACAGTTGGGTGGTCACAGGGGTGCCTGCACTATGCTGCTATATCTCCAGCTCCTCTCGCT
GTCGGGGATGACAACGATGAGGGTTCACTCAACATGGCTGAAGAGGTAGCGATCTGGCGCCTTGAGAATTATGACACCCA
GCAATGGGCGCTGAAGCAAAGTTTCAGAGTTGATAAGGTGCTGGACCTAGCTAAGCTGGGGTACAAGCTGGTTGGGTTCC
ATCCCGATCGTGACACCTTCTTTTTGGTCAGCAGTGGTCTTTATGGCGGAGT---------TGCGCCTTCATTGGTGTCG
TGGGACATGCGCCGCCGCCAAATTGGTGATTTCATTGACCTCGAGGAAGGCAGTGGGGGGCCATATCTGCCTTATGTTCC
TCTCTTCTCATCAGAGCCACTAGCAGATGCAGATGGGCACTAGTTCAGTTCGACTCATGCTTGGGCTTGCTCCAATGCAA
TGGAATAGTCATGTATGTGTACACCTGCACTTCTTAATATTCTTGAATTGTGTTAGCCAGTTTGTTCTCT-GGGCTAAAT
TATAC----TACTGTTATCCAGCTTGCTTGGCCATGATATGTCATGATTATGGTTGTACTGAATCCTAGTATTAGTGATT
GTTACTTGTGAACTTCATTTTGTTCCTTTTTAGTTATTATATGTTTGCTGATGCTCATGAGTTCAGTCTTGTTTAGTTGA
ATAATCCGGTCTTATGCAGTTGACAAGGCATGAATTAAGTGCATAATGCAAACTTTGCTGAGAAGTTTTCTTGCTTTGGT
GCATATGTGCATTTGGTTTGTTTCACTAATTCATCAGGTGATACTCGTGATTACGGTTATCCAGCTTTCTTGGCCATTTC
ATGTCGTGATTACGGTTGTACTGAATCCTAGTGTTAGTGAGTGCTACTTGTGAACTTTGGTTTGTTCCTTTTCTGTTATT
ATATGTTTGCTGATGCTTACGAATTCAGTCTTCTTTAGTAGATGAATTCGGTCTTGTGCAGCCGACAAGGTCATGAAATA
AGTGCATAATGCGAACTTTGCTGAGAAGTTTCCTTGCTTTGGTGCATAT----GTGCATTTGGTTTGTTTCACTTATTCA
TCAGGTGATATTCTAACGGTTACCGTGTAGGGCTGTTCTTCAAGTATAGTGGTATAAAAGATGCTGGGATAGTCCTTTTT
GCGAGCCGAATTTTATCATATCACTTTAAACTTTCAGCAGAAATATTCGTAAGAAATTTTGT--------------ACAG
GTTG-------------AAGCTGACATATATTGGGAAGATTGCTCTCCAGTTAACAAGGACAG--TGTAAAACATAGCAT
AATTTAACCATGCCAATTT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr1A_1170
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GGCGGCGGCGGTTAGTCGACTCACCGACGACC
TCATCGTGGAGATCCTCTCCCGGCTCCCCTTCCGGTCCGTCTGCCGTTTCAAGTGCGTCTCTAAGCCCTGGCGCGACCTC
ATCGCCCACCCCGCCCACCGCAAGAAGCTGCCCCAGACCCTCGCCGGCGTCCTCTACACCACCATCCCCGACGCCGGCGG
CTTCCGCCACCACTTGGCCGGC------GCCTACGCCGAGGGTCTTGATCTCGACACTTCACTCACGTTCCTGCCACATA
CGGAGTACAGGTACTTCGGGCTGGAGCACGCCTGCAATGGTCTCCTCCTCTGCTCCTACTACCCGGACGCGGGATCTCAA
GTCCGTTTTGTCGTCTGCAATCCGGCCACCCGGAGGTGGGCGGAGCTGCCCCCCGGCCCGCAGCCGCGGCCAAACACATG
CGGCTTTCACTGCCAGTTCCACCTGGCTTTTGATCCAGCAGTCTCATCCCATTTTCACGTTTTTGATTTCGAGCGCACTG
ACGACGTCGGC---CTCACAGGAGTGAGCATCTACTCATCGAGAACCGGAGCCTGGACCCGGAGGGATA---CTGGATTG
CTTGACAATGTTGTACTGGAACATCACAGTGTCCTGCTTCATGGTATGCTGCATGTTGTGGGCAACCGGCGTCGGACCAA
CAGCAACAACACTTGGGAAGACACTACTGTGCTGGTGGCCGTGGACATGGAGGGCAAGGTGTGGAAGACCATCTCCATGC
CACGCGGACAGTTCTATTATAGGGTTGGGTGGTCACAGGGTTGCCTGCACTATGCTACTATATCTCCAGTTCCTCTCACT
GCCAGCAACGACGACGATGAAGATTCACTCAAGATGGCTGAAGAGGTTGCGATCTGGCGCCTTGAGGATTATGATACCCA
ACAATGGGCCCTGAAGCACAGTTTCAGAATCGATGAGGTGCTGAACCTAGCTGAGGTGGAGTACCAGCTGGTTGGGTTCC
ATCCCGATCGTGACATCTTCTTCTTTGTCAGCATGGGTCTTTTTGATGGCGATGCACGAGATGCGGCTTCATTGCTGTCG
TGGGACATGCGACGTCACCAACTCTCAAGTGTGCTCGATCTCGAGAAATGCAGTGTCGGGCCATATCGGCCTTATGTTCC
TCTCTTCTCATCAGAGCCACTAGCAGATGCAGATGGGCACTAATTCAGTTTGATTTCTGCTTGGGCTTGCTCCGAT-CAA
TGGAATAATCATGTATGTGTACACCTGCACTTCTTAATCTTCTTGAATTATGTTAGTCAGTTTGTTCTGTGGGGCTGAAT
TATACTATATACTGTTATCCAGCTTTCTTGGCCATGACATGTCATGATTATGGTTGTCCTGAATCCTAGTA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TTAGTGAGTGCTACTTGTGAACTTCGTTTTGTTCCTTTTCAGTTATC
ATATGTTTGCTGTTGCTGATTAATTCAGTCTTGTTTAGTTGATGAATTCGGTCTTATGCAGTAGATGAGCTCATGAATTA
AGTGCATAATGCAAACTTTGCTGAGAAGTTTCCTTG-TTTGGTGTATATGCACGTGCATTTGGTTTGTCTCAATTATTCA
TCAGGTGATAAACTAACGGTTACCATGTAGGGTTGTTCATCAAATATAGTGGTATAAAAGGTGTTCGGATAGTCCTTTTC
ATGACCTGAATTTTATCATCACTCGAAA---CTTCAGCAGAAATATTCGTAAGAATTTTTTTTGTAGCGGGGTTTGACAG
GTTG-------------AAGCTGACCTGTATTGGGAAGATTGCTCTCCATTTAACACCGACAGACT---AAAAATAGCAT
AGTTT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr1A_1504
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CCGGAGGAGGGAAC---C
GCCCGTTTCGTCGTCTGCAATCCCGCCACCCAGAGGTGGACGGAGCTGCCCCCTCGCC------CGCGGCCAAACACATG
CCGCTATTACCAGCAGTTCCATCTGGCTTTCGACCCAGCAGTCCCGTCCCATTTCCACGTTTTTGATTTCGAGAGCACTG
ACGACGTGGAC---ATTACAGGAGTGAGCATCTACTCGTCGAGAACCGGAGCCTGGAGCCAGAGGGATA---CTGGATCG
GTTGACAAGGTTTGGCTGACCAATCGCAGTGTCCTGGTTGGCGGCATGCTGCACGTTGTCGGAAACCTACTGTATCCGGA
CGACAGCAACAATTGGGAAGACAAGACTGTGCTGGTGGCTGTGGACATGGAAGGCAAGGTGTGGAAGACCATCTCCGTGC
CACGCGGCCAGAGCTATGGTACAGTTGGGTGCTCACAGGGGTGCCTGCACTATGCTGCTATATCTCCAGCTCCTCTCACT
GTTGGG---GACGACGATGAGGATACACTCTGCATGGCTGAAGAGGTAGCGATTTGGCGCCTTGAGGATTATGATACCCA
GCAATGGGCCCTGAAGCACAGTTTCAGGATCGATAATGTGCTGAACCTAAATGAGGTGGAGTACCGGATGGTTGGGTTCC
ATCCCGATCGCGACACCTTCTTCTTTGTCAGCAAGGGTATTTTTGAGGGCGAAGCATGGGATGCGGCTTCATTGCTGACA
TGGGACATGCGACGTCGCCAACTCTCTAGTGTCCTTCATCTCGAGAAAAGCAGTGTAGGGCCGTATCTGCCTTATGTTCC
TCTCTTCTCATCAGAGCCACTAGCAGATGCAGGTGGGCACTAATTCAGTTCGACTCATGCTTGGGCTTGCTCCGAT-CAA
TGGAATAATCATGTATGTGTACACCTGCACTTCTTAATCTTTTTGAATTGTGTTAGTCAGTTTGTTCTATGGGGCTAAAT
TATAC----TACTGTTATCCAGCTTTCTTGGCCATGATATGCCATGATTACGGTTGTCCTGAATCCTAGTA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TTAGTGACTGTTAATTGTGAACTTCGTTTTGTTCCTTCTTAGTTATT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS--------------------------S---S--------------S------S----S-
-------------------S----S--------------------------------------S----------------
----SS---------------------------------------------------------S----------------
------------------------------------------------------------------------S-----SS
SSSSSSSSSSSSS----S-------------------------------SS-S-SSSSSSS--S----------------
--------------------------------------------------------------------------------
----------------------------SS--------------------------------------------------
---------S----------------------------------------------------------------------
-----S------------------------------------------------------------S-------------
-S----------------------------------------------------S-------------------------
----------------------------------------SSSSSS----------------------------------
--------------------------------------------------------------------------------
-------S------------------------S-----------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------S-----------------------
-----------------------------------------S--------------------------------------
----------------------S--------S--------S---------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------S---SSS-----
-------------------------------------------------------S-----------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S-------S---------------------------------------S
--------------------------------------------------------------------------------
-------S--S--------------------------S----------S----------SSSSSS---------------
-------------------------------------S-S--S--------S--S-------------------------
------SS-----S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_425
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TGTGGGCCATCATCGAACTC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_1943
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CAGACTGTGTTGGTGGCCTT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_1810
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TCTACTCGTCCAGAACCGGG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_3261
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CACAGGGGGTTTGACAGGTT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
