>input_sequence_52640
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------ATGGAGCTGGGG
TTGAGCTTGGGGGAGGCCATGGCGGACGCCGGCCGGGAGCTGGTTCTTGGGCTCGGGGTCGG------------------
CCCGGGGGCGAGGAGGGAGGAGGAGGGGAGGAGGGGCCAGGATGTCGTCGCCGCCGTCGACAGGAGGGGGCTCGCGTTGG
GGTGCGGCTCTTCGCCGGAGCCGACGATGCGGCTCACGCTTCTGCCCATGGTGCCCAGCCTCGGCTTCCCGTGGCCGTCC
GAGAGCAGTGAGT-----GATGCATGCTTACCTTTTCTTTTCCGTTTCTCTTGGATTTGA------TTCTGCATGCCACG
GGATGAAATCGCCGCCGGAATAGTAGTGCTGACATGGGGCGATCCGATCTGCTCCG----------CAGGGCATTTGGAG
GCGTCGACGCGGGGGTTCGACGTGAACCAGGCGCCGTCCTCCGGGGGCTCGGCCTGGGGCGCCTGCACGGCGGGGGCGGC
GGCGGAGGAAGAGCAGGAGGACACCGCCGCGGCAGCGCGGGCGGCCGTCTCGTCCTCGCCCAACGACAGCGGGGGCTCCT
TCCCGATGGACTTCTCCGCGCAGGGCGACCGCGGCGCCAGCGACGCCGCCCCG---GGGGCCGGCGGCTCCCGCGGCAGC
GACGAAGACGACGGCGGCTCGGCGCGCAAGAAGCTGCGCCTCTCCAAGGAGCAGGCCGCGTTCCTGGAGGAGAGCTTCAA
GGAGCACAGCACCCTCAACCCCGTAAGCATGCAGATCAAACACAGAGACGAGCG-CGTTTGCTTAATCATTTCCTCTCGT
TCTGACGCCGGTGCGTTCCATG-GCGCAGAGGCAGAAGGTGGCGCTGGCGAAGCAGCTCAACCTCCGGCCGCGCCAGGTG
GAGGTGTGGTTCCAGAACCGCAGGGCCAGGTGCGGCGCCATGAAATCCTTTTCTTTTCCTAGTCCTTTGTCTCTCTCGTC
TCGAGCAAGAATCTTGGCTGGTCAAGCGAAACCAATTAAATAAAAGCGCGCTC------GCTTTGGGTTTGGCGCGTGCA
GGACGAAGCTGAAGCAGACGGAGGTGGACTGCGAGTACCTGAAGCGCTGCTGCGAGACGCTGACGGAGGAGAACCGGCGG
CTGCAGAAGGAGCTGGCGGAGCTGCGGGCGCTCAAGACGGTGCACCCCTTCTACATGCACCTCCCGGCGACCACCCTCTC
CATGTGCCCGTCCTGCGAGCGCGTCGCCTCCAACTCCGCCCCGGGCACCGCCGCGGCCCCCTCGCCCGCGCCGGCGTCCG
CTGCCCCCGCGCCCGCCTCAGGCGCAGGCATTGGGG---CGGCAGCCGCTCCGGAGCAGCACAGGCCCTCGTCGTTCGCC
GCGCTGTTCTCGTCGGCCAGGAGCTTCCCGCTGGCCTCGTCCCAGCCCCAAGCTCCATTGCCGGCGCCGTCGAGCTCGTG
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------
>chr5B_1_TraesCS5B01G231300
TTTTCATTCCTTTTTTGCATTCATCATTCTTGCCACCATACCATAAAAGTATGGAAATGAACACCATCGACGTTAAACAA
CGAATACTACTACACTAACCATAGCAACGAAAATTTTGCCCCATTGTGCAACAACTTCGTAGTATGACCCTAGAATCTCA
CTCGTCTCCACCCCAAAATTACGAGTCCATGCTACGTACTGCTGCGCGGTTCCAGGTCGAGCAGACACGACCACGAGACA
GAAATTCCGCCATAAAGAATCGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGGGTGCTGTTTATAAAAGGGGAAAGATACGTAGAGCCCGCGATAATGATTAACATAATTATTACC
GCCTGCCATCAACGCTCCCTCCTTTTGCCGCGAACCACCCCGGCGAACGCCGGAATCGCGCACCGGCCCCGCTCCTTTTC
CTCCGGGTCACGTGC-----GGGGGGCTCGCCTCGTCAACTGGTCAAACCCGCCATTATAGCTCACATACACATACACCG
GAGGAGAGA------------------GGAGGGGAGTCCCGTCCCTGTCCCCGCCCCTATAAAACCTCCAAATCCTTGCG
CGTCTCCACGGTCCCATATCCCACCATCATCGTCCGTCCTGCTGGTAGGCTTT-----GATCCCTCCCATGGAGCTGGGG
TTGAGCTTGGGGGAGGCCATGGCGGACGCCGGCCGGGAGCTGGTTCTTGGGCTCGGGGTCGG------------------
CCCGGGGGCGAGGAGGGAGGAGGAGGGGAGGAGGGGCCAGGATGTCGTCGCCGCCGTCGACAGGAGGGGGCTCGCGTTGG
GGTGCGGCTCTTCGCCGGAGCCGACGATGCGGCTCACGCTTCTGCCCATGGTGCCCAGCCTCGGCTTCCCGTGGCCGTCC
GAGAGCAGTGAGT-----GATGCATGCTTACCTTTTCTTTTCCGTTTCTCTTGGATTTGA------TTCTGCATGCCACG
GGATGAAATCGCCGCCGGAATAGTAGTGCTGACATGGGGCGATCCGATCTGCTCCG----------CAGGGCATTTGGAG
GCGTCGACGCGGGGGTTCGACGTGAACCAGGCGCCGTCCTCCGGGGGCTCGGCCTGGGGCGCCTGCACGGCGGGGGCGGC
GGCGGAGGAAGAGCAGGAGGACACCGCCGCGGCAGCGCGGGCGGCCGTCTCGTCCTCGCCCAACGACAGCGGGGGCTCCT
TCCCGATGGACTTCTCCGCGCAGGGCGACCGCGGCGCCAGCGACGCCGCCCCG---GGGGCCGGCGGCTCCCGCGGCAGC
GACGAAGACGACGGCGGCTCGGCGCGCAAGAAGCTGCGCCTCTCCAAGGAGCAGGCCGCGTTCCTGGAGGAGAGCTTCAA
GGAGCACAGCACCCTCAACCCCGTAAGCATGCAGATCAAACACAGAGACGAGCG-CGTTTGCTTAATCATTTCCTCTCGT
TCTGACGCCGGTGCGTTCCATG-GCGCAGAGGCAGAAGGTGGCGCTGGCGAAGCAGCTCAACCTCCGGCCGCGCCAGGTG
GAGGTGTGGTTCCAGAACCGCAGGGCCAGGTGCGGCGCCATGAAATCCTTTTCTTTTCCTAGTCCTTTGTCTCTCTCGTC
TCGAGCAAGAATCTTGGCTGGTCAAGCGAAACCAATTAAATAAAAGCGCGCTC------GCTTTGGGTTTGGCGCGTGCA
GGACGAAGCTGAAGCAGACGGAGGTGGACTGCGAGTACCTGAAGCGCTGCTGCGAGACGCTGACGGAGGAGAACCGGCGG
CTGCAGAAGGAGCTGGCGGAGCTGCGGGCGCTCAAGACGGTGCACCCCTTCTACATGCACCTCCCGGCGACCACCCTCTC
CATGTGCCCGTCCTGCGAGCGCGTCGCCTCCAACTCCGCCCCGGGCACCGCCGCGGCCCCCTCGCCCGCGCCGGCGTCCG
CTGCCCCCGCGCCCGCCTCAGGCGCAGGCATTGGGG---CGGCAGCCGCTCCGGAGCAGCACAGGCCCTCGTCGTTCGCC
GCGCTGTTCTCGTCGGCCAGGAGCTTCCCGCTGGCCTCGTCCCAGCCCCAAGCTCCATTGCCGGCGCCGTCGAGCTCGTG
ACTTCGCCGGCCGGCGA----AGGGAGGGCCTGCTTGTAAATACGCGCACCTTAATATTTT-CGCTCCTCGTGTCGGGAT
TTTTTTGTGGCTCGCCATTCGCCGAGGG----GTCTGTGAGAAATGAGAACCCCAGCCCTAGTGGATTCGCGTCTGTCGT
CAGATTTGCTACTCCGACGGCTCAGATG----TTAAAGGAAAATTGTTGCATCAGAGTTCGTTGTTAACCTTGATCAATC
TCCGTGCATTTTCCCATTTATTATTACAGTTTTAAGACGTGCCTCGTGGTGAGAGGTTAAAAAAAAGTAGTAGC------
------ATCCGTGAGGGAGGATGTGAAAG----CGGAATTTAGTCCCACTTTTGGGGTGGTAGCTGAAGCCTGAAA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------GCACTGTGGCGTTTCTG
TTCACTTGCCGCGATGGTGTTGG-GG-GTCTGCACCGCTGATTTGTGAAATCATGACGCCCACCCAGCCGAGAGCGTGTG
TTCACGCCCACT----------------ACTGGCACTGGCACTCGCTCTTTACTGG-------AGTGAAAGCGTCGATAC
TAAGATTTTCCTCGAAGATCGAGAGTGTAAAGATGCGGCGTTGTGTGTGTG---------CTCAACCATACTACTACAAA
CTACTACTCCGACTCCCGTACAAACTACC---------------------GAAGCAAAATACTACTACCCCGTCCCATAA
TGGTGCCAAGTTCCG----GTACCAACAATGGTGTAGTAGCGTATGAACAATGCAACAGTGTT-----------------
--------------------------------------------TACGCAGGAGCTGTCAAGGAATAT---AACGTTGTA
CAGGTGGTCC-----TCGTGCTGCCCCGGTTTGGCACGCCAATGCC------------CATTACCGTACCCCAATCTGCT
GGCAGCAATGCCAC---TGCTACTGCCCCACCATGCCCACCCCATCATCAAGTATACA---TACGCATTTTCGATCTCAT
CTCCTCGCCCATA-------------AAACCATCGCCTCGGAGTCCACGTCACGAGTGACAAAGAGGAAGGCGACCGATG
AATGCAA-----CGCAGGGTCCGTGTCAATGTCATGACTCGTGCATGGCTAGGAGCCGCAG
>chr5D_656
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GGGTGCTGTTTATAAAAGGGGAAAGATACGTAGAGCCCGCGATAATGATTAACATAATTATTACC
GCCTGCCATCAACGCTCCCTCCTTTTGCCGCGAACCACCCCGGCGAACGCCGGAATCGCACAGCGGCCCCGCTCCTTTTC
CTCCGGGTCACGTGCGGGCGGGGGGGCTCGCCTCGTCAACTGGTCAAACCCGCCATTATAGCTCACATACACATACGCCG
GAGGAGAGA------------------GGATGGGAGTCCCGTCCCTGTCCCCGCCCCTATAAAACCTCCGAATCCTTGCG
CGTCTCCACGGTCCCATATCCCACCATCATCGTCCGTCCTGCTGGTAGGCGCGGCTTCGATCCCTCCCATGGAGCTGGGG
CTGAGCTTGGGGGAGGCCATGGCGGACGCCGGGCGGGAGCTGGTTCTTGGGCTCGGGGTCGG------------------
CCCGGGGGCGAGGAGGGAGGAGGAGCGGAGGAGGGACCAGGAT------------GTCGACAGGAGGGGCCTCGCGCTGG
GGTGCGGCTCCTCGCCGGAGCCGACGATGCGGCTCGCGCTCCTGCCCATGGTGCCCAGCCTCGGCTTCCCGTGGCCGTCC
GAGAGCAGTGAGT-----GATGCATGCTTGCCTTTTCTTTTCCGTT--TCTTGGATTTGT------TTCTGCATGCCGCG
AGATGAGATCGCCGGTGAAATAGCAGTACTGAGACGGCGCGATCCGATCTGTTTCCC---------CAGGGCATTTGGAG
GCGTCGACGCGGGGGTTCGACGTCAACCAGGCGCCGTCGTCCGGGGGCTCGGCCTGGGGCGCCTGC---------GCGGC
GGCGGAGGAGGAGCAGGAGGGCACCGCCGCGGCGGCGCGGGCGGCCGTGTCGTCCTCGCCCAACGACAGCGGGGGCTCCT
TCCCGATGGACTTCTCCGCGCAGGGCGAGCGCGGCGCCAGCGACGCCGCCCCGGGAGGCGCCGGCGGCTCGCGCGGCAGC
GACGAGGACGACGGCGGCTCGGCGCGCAAGAAGCTGCGCCTCTCCAAGGAGCAGGCCGCGTTCCTGGAGGAGAGCTTCAA
GGAGCACAGCACCCTCAACCCCGTAAGCATGCACATCAAACACAGGGACGAACCCCGTTTGCTTAACCATTTCCTCTCGT
TCTGACGCCGGCGCGTTCCATG-GCGCAGAGGCAGAAGGTGGCGCTGGCGAAGCAGCTCAACCTCCGGCCGCGCCAGGTG
GAGGTGTGGTTCCAGAACCGCAGGGCCAGGTGCGGCGCCATGAAATCCTTTTCTTTTCCTACTCCTTTGTCTCTCTCGTC
TCGAGCAAGAATCTTGGCTGGTCAAGCGAAACCAATTAAATAAAAGCGCGCTCGCTTTGGCTTTGGGTTCGGCGCGTGCA
GGACGAAGCTGAAGCAGACGGAGGTGGACTGCGAGTACCTGAAGCGCTGCTGCGAGACGCTGACGGAGGAGAACCGGCGG
CTGCAGAAGGAGCTGGCGGAGCTGCGCGCGCTCAAGACAGTGCACCCCTTCTACATGCACCTCCCGGCGACCACCCTCTC
CATGTGCCCCTCCTGCGAGCGCGTCGCCTCCAACTCCGCCCCGGCGCCCGCGGCCGGG----------------------
--------GCGCCCGGCTCAGGCGCCGGCATTGCTTCGCCG---GCCGCTCCGGAGCAGAACAGGCCCTCGTCGTTCGCC
GCGCTGTTCTCGTCGGCCAGGAGCTTCCCGCTGGCCGCCCCCCAGCCGCAACCTCCATTGCCGGCGCCGTCGAGCTCGTG
ACTTCGCCGGCCGGCGA----AGGGAGGGCCTGCTTGTAAATACGCCCACCTTAATATTTTCCGCTCCTCGTGTCGGGAT
TTTTTTGTGGCTCGCCATTCGCCGAGGG----GTCCGTGAGAAATGAGAACCCCAGCCCAACTGGATTCGCGTCTGTCGT
CAGATTTGCTACTCCGACGGCCGAGATGCTTATTAAAGGAAAAATGTTGCATTAGAGTTCGTCTTTAACCTTGATCAATC
TCCGTGCATTTTCCCATTTTATTACCGT-TTTTGAGGCGTGCCTCGTGATGAGAGGTTAAAAAAAAGTGGTAGTGC----
--------CCGTGAGGGAGGATGTGAAAG----CGGAATTTAGTCCCACTTTTGGGGTGGTAGCTGAAGCCTGAAA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------GCACTGTGGCGTTTCTG
TTCACTTGCCGCGATGGTGTTGG-GGGGTCTGCACCGCTGATTTGTGAAATCATGACGCCCACCCAGCCGAGAGCGTGTG
TGTATTGACGCCCACTACTGGCACTGGCACTGGCACTGGCACTCGCTCTTTACTGGTAGAGTGA----AAGGGTAGA---
TAAGATTTTCCTCGAAGATCGAGAGTGAAAAGATGCGGCGTTGTGTGTGTG---------CTCAACCATACTAGTACTAT
ACTACTAGTGTGAACTACGACTCTGGTAGTACAAACTGTTTTGCAGCATTGAAGCAAAATAT-----------------A
TGCTGCCAAGTGCTATACTGTACTAACAATGGTGTAGTAGCGTATGAACAAGGCAACAG----TGCTTACGACGGAGGAG
TATCTGT---ATCAAGCAAGCACTGCGCAGCACCGACCGCGCCATACGCAGGGGCTGTCAAGGAGTAC---AACGTTGTA
CAGGCGGTCC-----TCGTGCTGCCCCGGTTTGGCACGCCAATGCCAA------TGCCCATTACCGTACCCCCATCTGCT
GGCAGCAATGCCACCACTGCTACTGCCCCACCATGCCCACCCCATCATCAAGTATACATACTACGCATTTTCGATCTCAT
CTCCTCACCCATA-------------AAACCATCGCCTCGGAGTCCACGTCACGAGTGACAAAGAGGAAGGCGACCGATG
AATGCAATGCAACGCAGGGTCCGTGTCAATGTCATGACTCGTGCACGGCTAGCAGCGCAG-
>chr5A_656
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GGGCGCTGTTTATAAAAGGGGAAAGATACGTAGAGCCCGCGATAATGATTAACATGATTATTACC
GCGCCG---------------CTTTTGCCGCGAACCACCCCGGCGAACGCCGGAATCGCACGGCGGCCCCGCCCCTTTCC
CACCGGGTCACGTGCGGGCGCCC----------CGTCAACTGGTCAAACCCGCCATTATAGCTCACACA---------CG
GAGGAGAGAGAGGAGGGAGGGAGGGAGGGAGGGGAGTCCCGTCCCTGTCCCCGCCCCTATAAAACCTCCGAATCCTTGCG
CGTCTCCACGGTCCCATATCCCACCGTCGTCGTCCGTCCTGCTGGTAGGC------------------ATGGAGCTGAGG
CTGAGCTTGGGGGAGGCCATGGCGGACGCCGGCCGGGAGCTGGTTCTGGGGCTCGGGGTCGGGGTCGGGGTCGGGGTCGG
CCCGGGGGCGGCGAGGGAGGGCGAGGGGAGGAGGGATCACGAT---GTCGCCGCCGCCGCCAGGGGTGGGCTCGCGTTGG
GGTGCGGCTCGTCGCCGGAGCCGGCCATGCGGCTCGCGCTCCTGCCCATGGTGCCCAGCCTCGGCTTCCCGTGGCCGTCC
GAGAGCAGTGAGTGATGCGATGCATGCTTGCCTTTTCCTTTCCGTT--TCTTGGATTTGTGTTTGTTTCTGCATGCCGTG
CGATGAGATCGCCGCCGGAGTAGTGGTGCTGAGACGGGGCGATCCGATCTGTTCCGTTCCGTTCCTCAGGGCATTTGGAG
GCGTCGACGCGGGGGTTCGACGTGAACCAGGCGCCGTCGTCCGGGGGCTCGGCCTGGGGCGCCTGC---------GCGGC
GGCGGAGGAGGAGCAGGAGGACACCGCCGCGGCGGCGCGGGCGGCCGTGTCGTCCTCGCCCAACGACAGCGGGGGCTCCT
TCCCGATGGACTTCTCCGCGC---------GCGGCGCCAGCGACGCCGCCCCG---GGCGCCGGCGGCTCGCGCGGCAGC
GACGAGGACGACGGCCGCTCGGCGCGCAAGAAGCTGCGCCTCTCCAAGGAGCAGGCCGCGTTCCTGGAGGAGAGCTTCAA
GGAGCACAGCACCCTCAACCCCGTAAGCATGCACATCAACCACGGTGACCAACCCCGTTTGCTTAACCATTTCCTCTCGT
TCTGACGCCCATGGCTCCGCCGCGCGCAGAGGCAGAAGGTGGCGCTGGCGAAGCAGCTCAACCTCCGGCCGCGCCAGGTG
GAGGTGTGGTTCCAGAACCGCAGGGCCAGGTGCGGCGCCATGAAATCCTTTTCTTTTCCTGCTCCTTTGTCTCTCTCGTC
TCGACCAAGAATCTTGGCCGGTCAAGCAAAAACCATTAAATAAAAGCGCGCTGGCTTTGGCTTTGGGCTCGGCGCGTGCA
GGACGAAGCTGAAGCAGACGGAGGTGGACTGCGAGTACCTGAAGCGCTGCTGCGAGACGCTGACGGAGGAGAACCGGCGG
CTGCAGAAGGAGCTGGCGGAGCTGCGCGCGCTCAAGACGGTGCACCCCTTCTACATGCACCTCCCGGCGACCACCCTCTC
CATGTGCCCCTCCTGCGAGCGCGTCGCCTCCAACTCCGCCCCGGCCTCCGCGGCGGCCCCCTCGC------------CCG
CTGCCCCCGCGCCCGCCTCAGGCGCCGGCATTGCTTCGCCGGCGGCCGCTCCGGAGCAGCACAGGCCCTCGTCGTTCGCC
GCGCTGTTCTCGTCGGCCAGGAGCTTCCCGCTGGCCGCCCCGCAGCCCCAGCCTCCATTGCCGGCGCCGTCGAGCTCGTG
ACTTGGCCGGCCGGCGAAGGGAGGGAGGGCCTGCTTGTAAATACGCCCGCCTTAATA-TTTCCGCTCCTCGTGTCGGGAT
TTTTT-GTGGCTCGCCATTCGCCGAGGGCGGGGTCCGTGAGAAACGAGAGCCCCAGCCCGAGTGGAACCGCGTCTGCCGT
CAGATTTGCTGCCCGGACGGCCCGGATGC---TTAAAGGAAAATTGTTGCATCAGAGTTCGCTGTTAGCCTCGATCAATC
TCCGTGCATTTT-----------ACCGT-TTTTGAGACGTGCCTCGTGATGAGAGATTGAAAAAAAAAAGTGTACTAGTA
GTACGTATCCGTGAGGGAGGACGTGAAAGAAAGCGGAATTTAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAGGCGCTGTGGCGTTTCTG
CTCGCTTGCCGCGATGGTGTTGGGGGGGTCTGCGCCGCTGATTTGTGAAATCATGACGCCCACCCAGCCCAGAGCGTGTG
CGCATCGACGCCCACTACTGC------------------CACTCGCTCTTTACTGGTAGAGTGAGTGAAAGCGTAGA---
TAAGATTTTACTCGAAGATCGAGGGTGAAAAGATGCGGCGTCGTGTGTGTGTGTGGTGCGCTCAACCATGCTACGACT--
-------------------------------CAAACTGTTTTGCAGCCAAGTGCTA------------------------
-------------------GTACTAACTATGGTGTAGTAGCGTATGAACAATGCAACAGTGCTTACTTACGACGGATGAG
TGGTCGTATCATCAAGCGAGCACTGCGCAGCGCCGACCGCGCCATACGCAGGAGCTGTCAAGGAGTACTACAACGTTGTA
CAGGTGGTCCTCGTGTCGTGCTGCCCCGGTTTGGCACGCCAATGCCGATGCCAGTGCCCATTGCCGTACCCCCATCTACT
GGCA---ATGCCACCGCTGCTGCTCCCCCACCATGCCCGCCCCATCGTCAAGTGTAC-----ACGCATTTTCGTTCTCGT
CTCCTCGCCCATAAACACGACCCCGGAAACCGTCGCCTCGGAGTCCACGTCGCGAGTGACAACGAGGAAGGCGACCGATG
AATGCAACGCAGCGCGGGGTCCGTGTCAATGTCATGACTCGTGCATGGCCAGGAGCGCAG-
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS-----------------------------------------------------------------
-----------------------------------------------------------S--S-----------------
----------------------------------------------------------------------------S---
---------------------------------------------------------------------S----------
--------------------------------------------------SSS---------------------------
S-------------------------------------------------------------------------------
-----------------------------------S-------SSS----------------------------------
----------S------------------------S----S---------------------------------------
-----------------------------S----------------SS-----------S-----------------S--
S-----S-------------------------S-S----------------S----------------------------
--------------------------------------S---------------------------SSSSSSSSS-----
---------S-----------------------S--------------S-------------------------------
----------------------------S-----------------------------S-----------S---------
-----S--------------------------------------------------------------------------
---------------------------------S-----------S-----S-S------------S-------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
---------S----------------------------------S-S----S-------------SSSSSSSSSSSS---
-------------------------S-------SSS-------S------------------------------------
------------------------------------S-SS-----------S----------------------------
----------------------------------------------S---------------------------------
-----------------------------------S-----------------------S--------------------
---------------------S----------------------------------------------------------
-------------------SS-SSSSSSS----S--------------S------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S--SSSS-S-S--------------------------------------------------------------S--SSS
---------------------------S-------------------------------------------------S-S
SSSSSSSSSSSSSS-SSSS--SSSSSSSS--------------------------------SSSSSSSSSSSSSSSSSS-
--S--------S-SS--------S-------------------------------------S------------------
----------------------------------------------------------------S--S------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------SSSSS
>forward_178
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CA
CTCGTCTCCACCCCAAAA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1367
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AATCGCCGCCGGAATAGTAG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>forward_265
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TCCGCCATAAAGAATCGGGG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1393
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CATGGGGCGATCCGATCTG-----------------------------
--------------------------------------------------------------------------------
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>forward_1361
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TTTGATTCTGCATGCCACG
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------
>reverse_2620
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------TAGTGGATTCGCGTCTGTCG-
--------------------------------------------------------------------------------
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-------------------------------------------------------------
