>input_sequence_52614
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---------------------------------ATGGCGACGGAGGCAGCGCCGGAGTGGCTGGAGAAGGGCGACAACGC
GTGGCAGCTGGCGGCGGCGGCGCTGGTGGGGCTGCAGAGCGTGCCGGGCCTGGTCATCCTCTACGGCAGCATCGTCAAGA
AGAAGTGGGCCGTCAACTCCGCCCTCATGGCGCTCTACGCCTTCGCCGCCACCATGCTCTGCTGGTGCCTCTGGGGCTTC
CGCATGTCCTTCGGCGACCGCCTCCTCCCCTTCGTCGGCCGCCCCGACTTCGCCGGCCTCGACGCCGCCGGCTTCCTCTC
CGCCCAGGGCTTCGCTGGCGCCTACCCCGCCGCCACGCTCCTGTTCTTCCAGTTCGTCTTCGCCGCCATCACGCTCATCC
TCGTCGCCGGCTCGCTCCTCGGCCGCATGGACTTCCGGGCCTGGATGATCTTCGTGCCCCTCTGGCTCACCTTCTCCTAC
ACCGTCGGCGCCTTCAGCGTCTGGAGCCCCAACGGGTTCCTCTTCAAGGCCGGCGTCATGGACTTCGCCGGCGGCTACGT
CATCCACCTCTCCTCCGGCATCGCCGGCTTCACCGCCGCCTTCTGGGTCGGCCCCAGGACGGCCAAGGACAGGGAGGCCT
TCCCGCCCAACAACATCCTCCTCACGCTCGCCGGCGCCGGGCTGCTGTGGATGGGGTGGACGGGGTTCAACGGCGGCGCG
CCGTACGCCGCCAACATCGACGCGTCCGTCGCCGTCGTCAACACGCACCTCTGCACGGCCACGAGCCTCCTGGTGTGGCT
CATCCTCGACTGCTTCGTCTTCGGCCGCCCCTCCGCCATCGGCGCCGTCCAGGGCATGATCACCGGCCTCGTGTGCATCA
CCCCGGGCGCGGGGCTGGTGCAGGGCTGGGCGGCGATGCTGATGGGGCTCGTCTCCGGGAGCGTGCCGTGGTTCACCATG
ATGGTGCTGCACAAGCGGTACCGGATCCTGAGGCACGTCGACGACACGCTCGCCATCCTCCACACGCACGCCGTGGCCGG
CAGCATCGGCGGCCTCATGACGGGCCTCCTGGCGGAGCCGCGGCTATGCCGGCTCTTCTTCGGCGACGACCCGCGGTACG
TGGGCT------------------------------TCGTGTACGCGGTCAGGGGCGGGCGCGTCTCCGCGGGGCTTCGG
CAGATGGGCGTGCAGCTGGCCGGGATCGCATTCATCGTGGCGCTAAACGTCGTCGTCACGAGCATCGTGTGCCTGCTCGT
CAGGGTGGCCGTGCCGCTCCGGCTCAGCGAGGAGCAGCTGGCGGCCGGCGACGACGCCATACACGGCGAGGACGCGTACG
CGGTGTGGGGCGACGGCGAGACGTACGAGCAGTCCGTGCACGGGAGCCGGCGATACCAAATGACGGCCAATCCTATGTCG
TCCAAGGTTGATGAGATCATCTGA--------------------------------------------------------
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---
>chr5B_1_TraesCS5B01G393200
GTCAAGTAAGAATTGTTCTTGCCTATTGCTAAAATCCGAATGTTTGGTAGTTATTAAAGTCCATCAAATTATGTGATGAA
CTAGTTTAATTGTGTGTTTCAAATGAGTTTGTGTACAAACTTTGTGTTTAATTTTTTTTAAGATTAAAGTTTTAGGTGAT
TTGCTAGACGGAGAAAAGTTTAACCCCCTAAAAACTGGTAAGGGGCTGAGATAATAGATACAGTCTGAACTTTCAGGACA
GGGGATTTTTATTTTTTTTGGCATGGTTTCAGGATAGGGGATCTGGTGCTAAAGATTATATTCTTGTTCTATATATGTTG
ATCCGTGCATCAGTACGTACAAGCGCACGGTACAACGAG----------------------------TACATAATTTACT
TTTGTAGGTAGCCTATGTGCTGT----TGTTGGGTCCAAATGGCGCTTACAATAACGGTG-TTGACTAAATCCACCTGAC
TCTAACAGATTAGCCGGCTCT---------------TGATTCCAAAACTGGAGATCGATCAGACAATTGAAGGATCGGGA
ATGCTCCAACATTCATAAGGAAGTCCGCCATTTGATCTGCATATAGGACGA-CCTTCAGATTTGCACACTTCTTTTTTAC
---------AGAAATCATAGAAGTTGAGAATGTTTCATTAGATCCTTTGCGCCATTCAGTTTGCTGCATGCAGACATCGC
CGCTCTGAACACACGGCTCAGACGCTAATTACGGTAGGC--CGGCCGGCCTGTCACTGCAAAGTGCAGAGGTAGAGAGCA
ACAAACCCACAGAAAAAAGAGCAGAAGATTCAGCCACAGAACACACATGCACAACTGAATCTCGTCCTTGAGAAAGTACC
TCAGGAATCTGCGCGGCTTCTCCCCCCTCGGACCTCTTCCACCCCGCCCCTCCTATATAGCCCTCGCCCCCTCCACTTGG
CACCGCGTACTCGCCTCGCGAACGCGACGCCGGATCTTGTCACCCGCT----CACACTCGCATCGTGGACTGCCG----T
CGATCTCCGGCCGGCGA-GTAGGAG----GATCATGGCGACGGAGGCAGCGCCGGAGTGGCTGGAGAAGGGCGACAACGC
GTGGCAGCTGGCGGCGGCGGCGCTGGTGGGGCTGCAGAGCGTGCCGGGCCTGGTCATCCTCTACGGCAGCATCGTCAAGA
AGAAGTGGGCCGTCAACTCCGCCCTCATGGCGCTCTACGCCTTCGCCGCCACCATGCTCTGCTGGTGCCTCTGGGGCTTC
CGCATGTCCTTCGGCGACCGCCTCCTCCCCTTCGTCGGCCGCCCCGACTTCGCCGGCCTCGACGCCGCCGGCTTCCTCTC
CGCCCAGGGCTTCGCTGGCGCCTACCCCGCCGCCACGCTCCTGTTCTTCCAGTTCGTCTTCGCCGCCATCACGCTCATCC
TCGTCGCCGGCTCGCTCCTCGGCCGCATGGACTTCCGGGCCTGGATGATCTTCGTGCCCCTCTGGCTCACCTTCTCCTAC
ACCGTCGGCGCCTTCAGCGTCTGGAGCCCCAACGGGTTCCTCTTCAAGGCCGGCGTCATGGACTTCGCCGGCGGCTACGT
CATCCACCTCTCCTCCGGCATCGCCGGCTTCACCGCCGCCTTCTGGGTCGGCCCCAGGACGGCCAAGGACAGGGAGGCCT
TCCCGCCCAACAACATCCTCCTCACGCTCGCCGGCGCCGGGCTGCTGTGGATGGGGTGGACGGGGTTCAACGGCGGCGCG
CCGTACGCCGCCAACATCGACGCGTCCGTCGCCGTCGTCAACACGCACCTCTGCACGGCCACGAGCCTCCTGGTGTGGCT
CATCCTCGACTGCTTCGTCTTCGGCCGCCCCTCCGCCATCGGCGCCGTCCAGGGCATGATCACCGGCCTCGTGTGCATCA
CCCCGGGCGCGGGGCTGGTGCAGGGCTGGGCGGCGATGCTGATGGGGCTCGTCTCCGGGAGCGTGCCGTGGTTCACCATG
ATGGTGCTGCACAAGCGGTACCGGATCCTGAGGCACGTCGACGACACGCTCGCCATCCTCCACACGCACGCCGTGGCCGG
CAGCATCGGCGGCCTCATGACGGGCCTCCTGGCGGAGCCGCGGCTATGCCGGCTCTTCTTCGGCGACGACCCGCGGTACG
TGGGCT------------------------------TCGTGTACGCGGTCAGGGGCGGGCGCGTCTCCGCGGGGCTTCGG
CAGATGGGCGTGCAGCTGGCCGGGATCGCATTCATCGTGGCGCTAAACGTCGTCGTCACGAGCATCGTGTGCCTGCTCGT
CAGGGTGGCCGTGCCGCTCCGGCTCAGCGAGGAGCAGCTGGCGGCCGGCGACGACGCCATACACGGCGAGGACGCGTACG
CGGTGTGGGGCGACGGCGAGACGTACGAGCAGTCCGTGCACGGGAGCCGGCGATACCAAATGACGGCCAATCCTATGTCG
TCCAAGGTTGATGAGATCATCTGAGCAGTCCTATGCATT-GTAAGATCGATACTAGTGCATTGTGGAGTATATTTAACGG
ATTTGCTACTCCTATTTAGGAGTA------GATCCTAGTCCA----CAACGAATGTCCAAGGAAG--TTAGGAACAGCCT
-CTCTACTGGTCAAACCCACAAGA-TGTAGTTTTCGATGGATGAAGCAGTCCAAAGGGGCTGAGCCCTTGGATCAACATA
TAGCTAGCGATCCTCATCTTCCGAG----TTAAATGCATATAAGTATCACATCTATGGCTAGGGTAACAAATTAGTATGC
GCGTGTATATGAGCACTTGTGTCTGTACTGATGCTTAAAAAAAATTAGTATCAGCTTTCGCTTTTTTTGTTTGCAGATCA
GTACCGAATTTAGCGAAGGCTACAACAAATCACACCGATTCGTGATTGAACCGGCTTCGGCAAAGGAACTAATGAGCAGG
GCCCGCTTGTTAGGGACTGACGTGGTGTATCATGTGCATGTTCTTTCCTAGAAAACCCCCTTTTTTTATATTTGACTCAT
GGCCCCTTGTGGGGAGTTCGTCCCCACGTACACATGAATCTCACACGAGCCTTTTTTTACAAATGATGTGCATGATTAAA
TATAAAAGTAAGGGGGGTTCTACAAATGAACATGCACATGATGCCCCACGTAGGCCCCTGACAAGTGGGGGCCCATTCAT
TGGCCTGTCAAAACCGGTTCAAATACGAATCAATGCGATTTATTGTATCTAGCAAACTTGACACTGATCTGCAAAAAATG
AAAAATGGTACTCTTCCCATTTGAAAAAGCTTGTCTCTCAAATGGATGTATCTAGCATCGCCCTAGCCACAAATGTGGTA
CTCGTATGCAATTAGCTCTCATCTCCCAGGGCTTCTATTGTGAATTGGTTCGGTTGTCTGGTTCTCTGCTAAGCTCTTCC
GCATGTCATCTTTCCCAGCTCGGCTGGGCCCCCTACCACACACACCTCCTCTGGCGACTTGCGGTCTTGTCGTTCCCTCC
ATC
>chr5A_267
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--------------------------TTTCAGGATAGGGGATATGCTGCTAAAGATTATTCTTGTTTTG------TGTTG
ATCCGTGCATCAGTACGTACAAGCACACGGTACAACGAGTTCGCTTTATACTACTCCATATGCTATATATATAATTTACT
ATTGTATGTAGCATATGTGCTTATATATGTTGGGTACAAATGGCGCTTGCAACATTAGTGTTTGACTAAATCCGCCTGAC
AGTAACCGATTAGCCGGCC---------------CATGATTCCAAAACTGGAGATCGACCAAACAATTGAAGGACCGGGA
ATGCTCCAACATTCATAAGGAAGTCCGACATTTGATCTCCATATT---CGA-CCTTCAGTTTTGTACTCTTATTTTTTAC
T--------AGAAATCATAGAAGTTGAGAATGATCCATTAGATCCTTTGCGCCATTCAGTTTGCTGCATGCAGAAGTGGC
CGCTCTGAACACACGGCTCAGACGCTAATTACGGTAGGC--CGGCCGGCTTGTCATTGCAAAATTCAGAGGTAGAATGCA
ACAAACTCCCCAG-AAAAGAGCAGAAGATTCAGCCACAGAACACACATGCACAACTGAATCTCGTCCTTCAGAAAGTGCC
TCAGGAATCTGCGCGGCTTCTGCCCCCTCGGACCTCTTCCACCCCGCCCCTCCTATATAGCCCTCGCCCCCTCCACTTGG
CACCGCGTACTCGCCTCGCGAACGCGACGCCGTATCTTGTCACGCGCGCGCACACACTCGCATCGTGGACTGCCTGCCAT
CGATCGCCGCCCGGCGAGGTAGGAG----CATCATGGCGACGGAGGCGGCGCCGGAGTGGCTGGACAAGGGCGACAACGC
GTGGCAGCTGGCGGCGGCGGCGCTGGTGGGGCTGCAGAGCGTGCCGGGCCTGGTCATCCTCTACGGCAGCATCGTCAAGA
AGAAGTGGGCCGTCAACTCCGCCCTCATGGCGCTCTACGCCTTCGCCGCCACCATGGTCTGCTGGTGCCTCTGGGGCTTC
CGCATGTCCTTCGGCGACCGCCTCCTCCCCTTCGTCGGCCGCCCCGACTTCGCCGGCCTCGACGCCGCAGGCTTCCTCTC
CCGCCAGGGCTTCGCCGGCGCCTACCCGGCCGCCACGCTCCTCTTCTTCCAGTTCGTCTTCGCCGCCATCACGCTCATCC
TCGTCGCCGGCTCGCTCCTGGGCCGCATGGACTTCCGGGCATGGATGATCTTCGTGCCCCTCTGGCTCACCTTCTCCTAC
ACCGTCGGCGCCTTCAGCGTGTGGAGCCCCAACGGGTTCCTCTTCAAGGCCGGCGTCATGGACTTCGCCGGCGGCTACGT
CATCCACCTCTCCTCCGGCATCGCCGGCTTCACCGCCGCCTTCTGGGTCGGCCCGAGGACGGCCAAGGACAGGGAGACGT
TTCCGCCCAACAACATCATCCTCACGCTCGCCGGCGCGGGGCTGCTGTGGATGGGGTGGACGGGGTTCAACGGCGGCGCG
CCGTACGCCGCCAACATCGACGCGTCCGTCGCCGTCGTCAACACACACCTCTGCACGGCCACGAGCCTCCTGGTGTGGCT
CATCCTCGACTGCTTCGTCTTCGGCCGCCCCTCGGCCTTCGGCGCCGTCCAGGGCATGATCACCGGCCTCGTCTGCATCA
CCCCGGCCGCCGGGCTGGTGCAGGGCTGGGCGGCGATGCTGATGGGGCTCGTCTCCGGGAGCGTGCCGTGGTTCACCATG
ATGGTGCTGCACAAGCGGTGCCGGCTCCTGAGGCACGTGGACGACACGCTCGCCATCCTCCACACGCACGGCGTGGCCGG
CAGCCTCGGCGGCCTCATGACGGGCCTCCTGGCGGAGCCGCGGCTATGCCGGCTCTTCTTCGGCGACGACCCGCGGTACG
TGGGAT------------------------------TCGTGTACGCGGTCAGGGGTGGGCGCGTCTCCGCGGGGTTTCGG
CAGATGGGCGTGCAGCTGGCCGGGATCGCGTTCATCGTGGCCCTAAACGTCGTCGTCACGAGCATCATTTGCCTGCTCGT
CAGGGTGGCCGTGCCGCTCCGGCTCAGCGAGGAGCAGCTGGCGGCCGGCGACGACGCCATACACGGGGAGGACGCGTACG
CGGTGTGGGGCGAGGGCGAGACGTACGAGCAGTCCGTGCATGGGAGCCGGCGATACCAAATGACGGCCAATCCTATGTCG
TCCAAGGTTGATGAGATCATCTGAGCAGTCCTATGCATTTGTAAGATCGATACTAGTGCATTGTGGAGTATGTTTAACGG
ATTTG------CTGTTTAGGGGTACTCCTAGATCCTAGTCTACCACGAACGAATGTCCAAGGAAATATTAGGAACGGCCA
-CCTATACGGTCAAACCCACAACACTGTAGTTTTCGATCGTTGAAGCAGCCCGAAGGGGCTGAACCCTAGGATCAACATA
TAGCTAGCGATCCTAGCTTATCTCCACACTTAATTGCATATAAGTATCACATTTGTGCCTAGGATAACGAATTGGTA---
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>chr5D_358
AGTACT--------------------------------------------------------------------------
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----------------------------------------------------------------------ATAGTTTAGT
TTTGTATTGAGCCTTTATGCT----TATGTTGGATACAAATGGCGCTTGCAACAATGGTGTTTGACTAAATCCACCTCAC
TGTAACCGATTAGCCGGCTGATCCATGATGCACGCATGATTCCAAAACTGGAGACCGATCAGACAATTGAAGGACCGGGA
ATGCTCTGATGCTCATAAGAAAGTCCGCCATTTGATTTAATTGGAGCTTGTGCCTTCTGATTTGTACTCCTTTTGTTTAT
AACACAAGAAGAAATCATATAAC----------TTCGTTAGATTCTTTGCGCCGTTCAGTTTGCTGCATGCAGAAATCGC
CGCTCTGAACACACGGCTCAGACGCTAATTACGCTAGGCCGCGGCCGGCTTGTCACTGCAAAGTGCAGACGTAGAAAGGA
ACTAACTCCCCAG-AAAACAGCAGAAGATTCAGCCACAGAACACACATGCACAACTGAATCTCGTCCTTCAGAAAGTACC
TCAGGAATCTGCGCGGCTTCTCCCCCCTCGGACCTCTTCCACCCCGCCCCTCCTATATAGCCCTCGCCCCCTCCACTTGG
CACCGCGTACTCGCCTCGCGAACGCGACGCCGGATCTTGTCGCGCGCGCGCACACACTCGCATCGTCGACTGCGTGCCAT
CGATCGCCGGCCGGCGAGTAGGTAGATTAGATCATGGCGACGGAGGCGGCGCCGGAGTGGCTGGAGAAGGGCGACAACGC
GTGGCAGCTGGCGGCGGCGGCGCTGGTGGGGCTGCAGAGCGTGCCGGGCCTGGTCATCCTCTACGGCAGCATCGTCAAGA
AGAAGTGGGCCGTCAACTCCGCCCTCATGGCGCTCTACGCCTTCGCCGCCACCATGCTCTGCTGGTGCCTCTGGGGCTTC
CGCATGTCCTTCGGCGACCGCCTCCTCCCCTTCGTCGGCCGCCCCGACTTCGCTGGCCTCGACGCCGCCGGCTTCCTTTC
CGCCCAGGGCTTCGCCGGCGCCTACCCGGCCGCCACGCTCCTCTTCTTCCAGTTCGTCTTCGCCGCCATCACGCTCATCC
TCGTCGCCGGCTCGCTCCTGGGACGGATGAACTTCCGGGCATGGATGATCTTCGTGCCCCTCTGGCTCACCTTCTCCTAC
ACCGTCGGCGCCTTCAGCATCTGGAGCCCCAACGGGTTCCTCTTCAAGGCCGGCGTCATGGACTTCGCCGGCGGCTACGT
CATCCACCTCTCCTCCGGCATCGCCGGCTTCACCGCCGCCTTCTGGGTCGGCCCGAGGACGGCCAAGGACAGGGAGGCCT
TCCCGCCCAACAACATCCTCCTGACTCTCGCCGGCGCGGGGCTGCTGTGGATGGGGTGGACGGGGTTCAACGGCGGCGCG
CCCTACGCCGCCAACATCGACGCGTCCGTCGCCGTCGTCAACACGCACCTCTGCACGGCCACGAGCCTCCTGGTGTGGCT
CATCCTCGACTGCTTCGTCTTCGGCCGCCCCTCGGCCTTCGGCGCCGTCCAGGGCATGATCACCGGCCTCGTCTGCATCA
CCCCGGCCGCCGGGCTGGTGCAGGGCTGGGCGGCGATGCTGATGGGGCTCGTCTCCGGGAGCGTGCCGTGGTTCACCATG
ATGGTGCTGCACAAGCGGTGCCGGGTCCTGAGGCACGTGGACGACACGCTCGCCATCCTCCACACGCACGGGGTGGCCGG
CAGCCTCGGCGGCCTCATGACGGGCCTCCTGGCCGAGCCGCGGCTCTGCCGGCTCTTCTTCGGCGACGACCCGCGGTACG
TGGGCT------------------------------TCGTGTACGCGGTCAGGGGCGGGCGCGTCTCCGCGGGGTTTCGG
CAGATGGGCGTGCAGCTGGCCGGGATCGGATTCATCGTGGCGCTAAACGTCGTCGTCACCAGCATCGTGTGCCTGCTCGT
CCGGGTGGCCGTGCCGCTCCGGCTCAGCGAGGAGCAGCTGGCGGCCGGCGACGACGCCATACACGGCGAGGACGCGTACG
CGGTGTGGGGCGACGGCGAGACGTACGAGCAGTCCGTGCATGGCAGCCGGCGATACCAAATGACGGCCAATCCCATGTCG
TCCAAGGTTGATGAGATCATCTGAGCAGTCCTATGCA-TTGTAAGATCGATACTAGTGCATTGTGGAGTATGTTTCACGG
ATTTG------CTGTTTAGGAGTA------GATCCTATAGT-CCACCAACGAATGTCCAAGGAAA--GTAGGAACAGCCT
CCTCTACTGGTCAAACCCACAAGA-TGTAGTTTTCGATCGTTGAAGCAGTCCAAAGGGGCTGAGCCCTTGGATCAACATA
TAGCTAGCGATCCTCATCCCCAAG-----TTAATTGCATATAAGTATCATATTTGTGTCTAGGGTAACAAATT-------
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>chr5D_1333
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---------------------------------------------CTTCCAGTGCGTGTTCGCCGCCATCACGCTCATCC
TGGTGGCCGGGTCGCTGCTGGGCCGCATGAGCTTCCTGGCGTGGATGCTCTTCGTGCCGCTCTGGCTCACCTTCTCCTAC
ACCGTCGGCGCCTTCTCCGTGTGGGGCGG---CGGCTTCCTCTTCCACTGGGGCGTCATCGACTACTGCGGCGGCTACGT
CATCCACATCCCCGCCGGCGTCGCCGGCTTCACCGCCGCGTACTGGGTCGGGCCAAGGACCAAGAAGGACAGGGAGAGCT
TCCCGCCCAACAACATCCTGTTCGCGCTCACCGGCGCCGGGCTGCTGTGGATGGGGTGGGCCGGGTTCAACGGCGGCGGG
CCGTACGCGGCCAATGTCGACTCGTCCATGGCCATCCTGAACACCAACATCTGCACGGCGGCGAGCCTCATCGTCTGGAC
CTGCCTCGATGCCGTCTTCTTCAAGAAGCCCTCCGTGGTCGGCGCCGTCCAGGCCGTGATCACCGGTCTCGTCTGCATCA
CGCCAGGCGCAGG-------------------------------------------------------------------
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>chr3A_1333
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---------------------------------------------CTTCCAGTGCGTCTTCGCCGCCATCACGCTCATCC
TCCTCGCCGGCTCGCTGCTGGGCCGCATGAACATCAGGGCCTGGATGATCTTCGTGCCGCTCTGGCTCACCTTCTCCTAC
ACCATCGGCGCCTTCTCGCTCTGGGGCGG---AGGCTTCCTCTTCCAGTGGGGCGTCATGGACTACTCCGGCGGCTACGT
CATCCACCTCTCCTCCGGGATCGCCGGGTTCACCGCCGCGTACTGGGTCGGGCCCAGGTCCACCAAGGACAGGGAGAGGT
TCCCGCCCAACAACGTGCTCCTCATGCTCGCCGGCGCCGGCATACTCTGGATGGGGTGGGCCGGGTTCAACGGCGGTGAC
CCTTACGCCGCCAACCTCGACTCCTCCATCGCAGTGCTCAACACCAACATCTGCGCCGCGACCAGCCTACTCGTCTGGAC
CTCCCTGGACGTCATCTTCTTCAAGAAGCCCTCCGTGATCGGCGCCGTCCAGGGCATGATCACCGGCCTCGTCTGCATCA
CGCCCGGCGCGGGTCTGGTCCAGGGGTGGGCGGCGATCGTGATGGGGGTCCTCTCCGGCAGCATCCCGTGGTTCACCATG
ATGGTCGTGCACAAGCGGTCCAAGCTGCTGCAGCGCGTGGACGACACGCTGGGCGTGTTCCACACCCACGCCGTGGCGGG
GTTCCTCGGCGGCGTGACCACGGGGCTCTTCGCGGAGCCGACGCTGTGCAGCATGTTCGTGCCGGTGACCAACTCGCGCG
GCGCCTTCTACGGCGGCAGCAGCGGCGGCATGCAGCTCCTGAAGCAGGTGGTGGGCGCGCTCTTCATCGTCGGATGG---
---------------------------------------------AACGTGGTGGTCACCAGCATCATCTGCCTCGTCGT
CCGGCTTATCGTGCCGCTGCGGATGCCGGAGGAGGAGCTCGTGATCGGCGACGACGCGGTGCACGGCGAGGAGGCCTACG
CGCTCTGGGGCGACGGCGAGAAGTACGACTCGTCCAAGCACGGG------------------------------------
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>chr3A_1333
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---------------------------------------------CTTCCAGTGCGTCTTCGCCGCCATCACGCTCATCC
TCCTCGCCGGCTCGCTGCTGGGCCGCATGAACATCAGGGCCTGGATGATCTTCGTCCCGCTCTGGCTCACCTTCTCCTAC
ACCATCGGCGCCTTCTCGCTCTGGGGCGG---AGGCTTCCTCTTCCAGTGGGGCGTCATGGACTACTCCGGCGGCTACGT
CATCCACCTCTCCTCCGGGATCGCCGGGTTCACCGCCGCGTACTGGGTCGGGCCCAGGTCCACCAAAGACAGGGAGAGGT
TCCCGCCCAATAACGTCCTCCTCATGCTCACTGGCGCCGGCATACTCTGGATGGGGTGGGCCGGGTTCAACGGCGGTGAC
CCTTACTCCGCCAACGTCGACGCTTCCATCGCCGTCCTCAACACCAACATCTGCGCAGCGACCAGCCTCCTCGTCTGGAC
CTGCCTCGACGTCATCTTCTTCAAGAAGCCCTCCGTCATCGGCGCAGTCCAGGGCATGATCACTGGCCTCGTCTGCATCA
CTCCCGGCGCGGGTCTGGTCCAGGGGTGGGCGGCGATCGTGATGGGCATCCTGTCCGGCAGCATCCCGTGGTTCACCATG
ATGGTCGTGCACAAGCGCTCCAGGCTGCTGATGCACGTGGACGACACGCTGGGCGTGTTCCACACCCACGCCGTGGCGGG
GTTCCTCGGCGGCGCGACCACGGGGCTCTTCGCGGAGCCG----------------------------------------
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>chr3D_1333
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---------------------------------------------CTTCCAGTGCGTCTTCGCCGCCATCACGCTCATCC
TCCTCGCCGGCTCGCTGCTGGGCCGCATGAACATCAGGGCCTGGATGATCTTCGTGCCTCTCTGGCTCACCTTCTCCTAC
ACCATCGGCGCCTTCTCGCTCTGGGGCGG---AGGCTTCCTCTTCCAGTGGGGCGTCATGGACTACTCCGGCGGCTACGT
CATCCACCTCTCCTCCGGGATCGCCGGGTTCACCGCCGCGTACTGGGTCGGGCCCAGGTCCACCAAGGACAGGGAGAGGT
TCCCGCCCAACAACGTGCTCCTCATGCTCGCCGGCGCCGGCATACTCTGGATGGGGTGGGCCGGGTTCAACGGCGGTGAC
CCTTACGCCGCCAACCTCGACTCCTCCATCGCCGTGCTCAACACCAACATCTGCGCCGCGACCAGCCTCCTCGTCTGGAC
CTCCCTGGACGTCATCTTCTTCAAGAAGCCCTCCGTCATCGGCGCGGTCCAGGGCATGATCACCGGCCTCGTCTGCATCA
CGCCCGGCGCGGGTCTCGTCCAGGGGTGGGCGGCGATCGTGATGGGCATCCTGTCCGGCAGCATCCCGTGGTTCACCATG
ATGGTCGTGCACAAGCGGTCCAAGCTGCTGCAGCGCGTGGACGACACGCTGGGCGTGTTCCACACCCACGCCGTGGCGGG
GTTCCTCGGCGGCGTGACCACGGGGCTCTTCGCGGAGCCGACGCTGTGC-------------------------------
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>chr3D_1333
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---------------------------------------------CTTCCAGTGCGTCTTCGCCGCCATCACGCTCATCC
TCCTCGCCGGCTCTCTGCTGGGTCGCATGAACATCAGGGCCTGGATGATCTTCGTCCCGCTCTGGCTCACCTTCTCCTAC
ACCATCGGCGCCTTCTCGCTCTGGGGCGG---AGGCTTCCTCTTCCAGTGGGGCGTCATGGACTACTCCGGCGGCTACGT
CATCCACCTCTCCTCCGGGATCGCCGGGTTCACGGCCGCGTACTGGGTCGGGCCCAGGTCCACCAAAGACAGGGAGAGGT
TCCCGCCCAACAACGTGCTCCTCATGCTCACTGGCGCCGGCATACTCTGGATGGGGTGGGCCGGGTTCAACGGCGGCGAC
CCTTACTCCGCCAACGTCGACGCTTCCATCGCCGTGCTCAACACCAACATCTGCGCAGCGACCAGCCTCCTGGTCTGGAC
CTGCCTCGACGTCATCTTCTTCAAGAAGCCCTCCGTCATCGGCGCAGTCCAGGGCATGATCACTGGCCTCGTCTGCATCA
CTCCCGGCGCGGGTCTGGTCCAGGGATGGGCGGCGATCGTGATGGGCATCCTGTCCGGAAGCATCCCGTGGTTCACCATG
ATGGTCGTGCACAAGCGCTCCAGGCTGCTGATGCACGTGGACGACACGCTGGGCGTGTTCCACACCCACGCCGTGGCGGG
GTTCCTCGGGGGCGCGACCACGGGGCTCTTCGCGGAGCCGACGCTGTGCGGCT---------------------------
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>chr3B_1333
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---------------------------------------------CTTCCAGTGCGTCTTCGCCGCCATCACGCTCATCC
TCCTCGCCGGCTCTCTGCTGGGTCGCATGAACATCAGGGCCTGGATGATCTTCGTCCCGCTCTGGCTCACCTTCTCCTAC
ACCATCGGCGCCTTCTCGCTCTGGGGCGG---AGGCTTCCTCTTCCAGTGGGGCGTCATGGACTACTCCGGCGGGTACGT
CATCCACCTCTCCTCCGGGATCGCCGGATTCACGGCCGCGTACTGGGTCGGGCCCAGGTCCACCAAAGACAGGGAGAGGT
TCCCGCCCAACAACGTGCTCCTCATGCTCACTGGCGCCGGCATACTCTGGATGGGGTGGGCTGGGTTCAACGGCGGCGAC
CCTTACTCCGCTAACATCGACGCTTCTATAGCCGTGCTCAACACCAACATCTGCGCAGCGACCAGCCTCCTGGTCTGGAC
CTGCCTCGACGTCATCTTCTTCAAGAAGCCCTCCGTCATCGGCGCCGTCCAGGGCATGATCACCGGCCTCGTCTGCATCA
CTCCCGGCGCGGGTCTCGTCCAGGGGTGGGCGGCGATCGTGATGGGCATCCTGTCCGGAAGCATCCCGTGGTTCACCATG
ATGGTCGTGCACAAGCGCTCCAGGCTGCTGATGCACGTGGACGACACGCTGGGCGTGTTCCACACCCACGCCGTGGCGGG
GTTCCTCGGCGGCGCGACCACGGGGCTCTTCGCGGAGCCGCAGCTGTGC-------------------------------
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>chr3B_1334
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----------------------------------------------TTCCAGTGCGTCTTCGCCGCCATCACGCTCATCC
TCCTCGCCGGCTCGCTGCTGGGCCGCATGAACATCAGGGCCTGGATGATCTTCGTGCCGCTCTGGCTCACCTTCTCCTAC
ACCATCGGCGCCTTCTCGCTCTGGGGCGG---AGGCTTCCTCTTCCAGTGGGGCGTCATGGACTACTCCGGCGGCTACGT
CATCCACCTCTCCTCCGGGATCGCCGGGTTCACCGCCGCGTACTGGGTCGGGCCCAGGTCCACCAAGGACAGGGAGAGGT
TCCCGCCCAACAACGTGCTCCTCATGCTCGCCGGCGCCGGCATACTCTGGATGGGGTGGGCCGGGTTCAACGGCGGTGAC
CCTTACGCCGCCAACCTGGACTCCTCCATCGCCGTGCTCAACACCAACATCTGCGCCGCAACCAGCCTCCTCGTCTGGAC
CTCCCTGGACGTCATCTTCTTCAAGAAGCCCTCCGTCATTGGCGCCGTCCAGGGCATGATCACCGGCCTCGTCTGCATCA
CGCCCGGCGCGGGTCTCGTCCAGGGGTGGGCAGCGATCGTGATGGGGATCCTGTCCGGCAGCATTCCGTGGTTCACCATG
ATGGTCGTGCACAAGCGGTCCAAGCTGCTGCAGCGCGTGGACGACACGCTGGGCGTGTTCCACACCCACGCCGTGGCCGG
GTTCCTCGGCGGCGTGACCACGGGGCTCTTCGCGGAGCCGACGCTGTGC-------------------------------
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---
>SNPs
SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS----------------S--S-------------SS-SS-S--SSSSSSS-----
------------------------S--------------------------------------------S----------
------S--------------SS------------S------------S---S--S------------------------
-S----S------------SS-----------------------------------------------------S-----
--------------------------------------S-------SS----------------S--S---S--------
--------------------------------S-----------------------------------------S-----
-------------------------------------------------S-------------------------S----
------S-S-SSSS-------------------------------------------------------S----------
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-------------------------------------------S---S--------------------------S-----
-----S-----------------------------------------S--------------------------------
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---------------S-----------S--------------S-------------------------------------
-------------------S------------------------------------------------------------
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------------------------------------------------------------------------S-------
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-------------------S----S-------------S-----------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
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-----------------------------------------------------------------------S--------
-----SSSSSS--S--------------------------S-----------------------S---------------
--------------------------------------S-S---------------------------------------
-------------------S--SSS--------S------------------S-S--S---------------S---SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS
>forward_449
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-----------------------------TTGGGTCCAAATGGCGCTTA-------------------------------
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>reverse_1403
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------------------------------------------GTTCTTCCAGTTCGTCTTCGC-----------------
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>forward_453
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--------------------------------GGTCCAAATGGCGCTTACAAT---------------------------
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>reverse_2025
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------------------------ATCCTGAGGCACGTCGAC--------------------------------------
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>forward_813
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------------------------------------------------------------------------AGAGAGCA
ACAAACCCACAGA-------------------------------------------------------------------
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>reverse_2798
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-----------------------------------------------------------------------------TGC
GCGTGTATATGAGCACT---------------------------------------------------------------
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---
