>input_sequence_52576
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------ATGGCTGCTGGTGACCACCCACACTCAATAT
CAGAGAAAAAGGCAGCACTGAGGGAGTCACCTAAGCAATCCAAGAATGATGTTAATCAGCAAGCCAGAGCTTCTACATTT
CCTAAAGACAAAGTTGCTGGGACTGTTGGTATCAAGAGGCCGCAACCTAATGCCCCCCTGAGCCTG---ACCAACCAGCA
CGCACCAGGAAATCCCGGGGCAAATGGCCATCTCGTGTATGTGCGCAGGAAGCTTGAAACAGACCAAAGCAAAGGAGGCG
CTTCTGCTGGTGCAGAGAGTGCCAATTCTGTGAGCTCAAAGAAACCTGCTACTGGTGGACCGCAGGAGCAAAGTTTGAAG
CTTCAGAACAGTGCAACTCATGCCCAATCAGCTCCTGTTTCCGCGTCTCCTGCTGCAGCTGCTGCTACCACCAATGTGTC
TCATACTCCATCAGCTCCTGTTTTCGCGTCTCCTGCTGCAGCTGCTGCTACCACCAGTGCGTCTCATACTCCATCAGCTC
CTGTTTCTGCGCCTCCTGCTGCTGCAGCTGCTGCTACTGCCCCTGCTTTGCACCCTGCAAGTTTGCCGGCTCACCTTTCT
CTCGCGAAACAGTCTCCAGGAGTGGTTGCTGCTACTGCCCCTGCATTGCACCCTCCAACTTTGCCAGCTCACCTTTCTCT
TGCGAAACAATCTCCAGGGAAGGCCACTGTCCATCCTAGTGTTGTTGTGACTGCTAGTCCGCCGCACCGCAGTGTTGTGT
CTACTGCCATGCCTCAGAACTTTACGGCTGCCAATACATCCCTTTGTAATGTTGTGGCTACTAGTACAGCACCTCGTGAT
GCTGTGGCTACCGCTACGACATGTAATCCGACCGATTCGCAAAGATCGGGGGATCAAGATTGGAAAGCGAGGTTTCTTCG
GCTGCAGGCATTCCTGAGAAATAATGAGCAATCAGGACAGGAAGAATACATCCGCAGTAAGTTCATTATTCTTAGCTGAC
AACAAATTTACCACAACTGCTATCTAAAACATGTGTGTTTTGTCTGAACTGTAGTGCTCCAGTCTTTGTCATCTGTTGGC
CGGAGCAAGCATGCCATTGAGCTCGAGAAACGAGCAGTCAATCTCTTAATCGAAGAAGGTACTCCTCAATCTGAT-----
--TTTTGCAGCTTTGATCTTGCTTCTTAACATTGCTTTGTTGGTATTTGTATTTTCGCACATTGATTCATCGTAAATCTG
TTTACAATAGCTCGAGTGTTTGACCGCACTTACACCCTTATTTGCTTCAGGGAAGGAGCTGCAGAAGATGAAAGCTCTGA
ATGTGCTCGGCAAGCTTCCACCTGCCGAACATCCGTCACTACCAACTCAGCCAACTTTTGGTATGCGTCTGCCGTTCCAG
CCATTCCCAGCCCGCCGCTGA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>chr5A_1_TraesCS5A01G349400
CGACACAGATAGTGGATTTGATTGGATTGGGTTGGGT-----GCGCGCTATTACACGAGTTGGTTGCATTTTGCCACATT
CTGGTACTGTCAGTATAGAATCCTGATTCATAATGCCTAGAATAGAATTGACCTGACTGCAGAGTGGATAA-CACATCCT
GTAATTAATTA--------ACCTAGTCGTGCCCTGTTTGTTTTCT------------TAGAGAAAGCGAGTCTTTCTCAA
TG---------TATATATGTGCTCGTCACCGCCCCGCGGTGTGGTTCTTGCTGGAATGCCGTCGACGGGGTTAGCCGGCC
CTG-ATGCTCTTCATCTTCGGGTCAGGGAGGGCATGTAAAGCTGGCGTTTTTTACACAGGTAGTGGTGGGTTGGATTCGA
TTCGATTGGATGCTCTTACATGAGCTGATTGCATTTGCTTAATTACATTCT--GGTGCCCTTAATCCTGACAGATAACAA
ATGTATAGAATTGACTTGATTGCGGAGTGGACAACACATCTTGTACTCCCTCCGTAGCTTGCAAAATGGTCTTACATTAT
AGGACGGAGGGAGTAGTTAGCTTAGCCGTGGCCGTC--------------------------TTTTTCAGTATATATGTG
TGGACGAACAGTTCTTTCTTTT--AGAGA-GTATGAATTGAGCTAAATCTGCATAAACCATTTCCTTTCGCCAGTTGCTG
GGTACTATCTAAAATAACTAATCCCAGATAGGTAGTAGAGAGAAGCTGAACTTTTTGTTGTATTGTACTGCTCGATGATT
TCCCACCCAAGCTCTGCACTCTAGCATTTTGTGGATAACAGCATTAGTAAAGGTCGTGTG--ATCGTACAATGAGTACTA
GATTGTGACTGGAAACAG-----------------AATTTTCGGAATTTCAGTTGTGTTGATGGACCTACCAAGTTGGTA
CTTGTTGATGGAGTAACTTGTTCTCTGTTGATATTCGTAGTACCTACTTTGCAAATTTCATCACTGATGATGTGTAGA-T
TTTGAATCCAGAT--CCAAGTTGGTTGGCTGCAGTTCTGCAGAGGCACCATGGCTGCTGGTGACCACCCACACTCAATAT
CAGAGAAAAAGGCAGCACTGAGGGAGTCACCTAAGCAATCCAAGAATGATGTTAATCAGCAAGCCAGAGCTTCTACATTT
CCTAAAGACAAAGTTGCTGGGACTGTTGGTATCAAGAGGCCGCAACCTAATGCCCCCCTGAGCCTG---ACCAACCAGCA
CGCACCAGGAAATCCCGGGGCAAATGGCCATCTCGTGTATGTGCGCAGGAAGCTTGAAACAGACCAAAGCAAAGGAGGCG
CTTCTGCTGGTGCAGAGAGTGCCAATTCTGTGAGCTCAAAGAAACCTGCTACTGGTGGACCGCAGGAGCAAAGTTTGAAG
CTTCAGAACAGTGCAACTCATGCCCAATCAGCTCCTGTTTCCGCGTCTCCTGCTGCAGCTGCTGCTACCACCAATGTGTC
TCATACTCCATCAGCTCCTGTTTTCGCGTCTCCTGCTGCAGCTGCTGCTACCACCAGTGCGTCTCATACTCCATCAGCTC
CTGTTTCTGCGCCTCCTGCTGCTGCAGCTGCTGCTACTGCCCCTGCTTTGCACCCTGCAAGTTTGCCGGCTCACCTTTCT
CTCGCGAAACAGTCTCCAGGAGTGGTTGCTGCTACTGCCCCTGCATTGCACCCTCCAACTTTGCCAGCTCACCTTTCTCT
TGCGAAACAATCTCCAGGGAAGGCCACTGTCCATCCTAGTGTTGTTGTGACTGCTAGTCCGCCGCACCGCAGTGTTGTGT
CTACTGCCATGCCTCAGAACTTTACGGCTGCCAATACATCCCTTTGTAATGTTGTGGCTACTAGTACAGCACCTCGTGAT
GCTGTGGCTACCGCTACGACATGTAATCCGACCGATTCGCAAAGATCGGGGGATCAAGATTGGAAAGCGAGGTTTCTTCG
GCTGCAGGCATTCCTGAGAAATAATGAGCAATCAGGACAGGAAGAATACATCCGCAGTAAGTTCATTATTCTTAGCTGAC
AACAAATTTACCACAACTGCTATCTAAAACATGTGTGTTTTGTCTGAACTGTAGTGCTCCAGTCTTTGTCATCTGTTGGC
CGGAGCAAGCATGCCATTGAGCTCGAGAAACGAGCAGTCAATCTCTTAATCGAAGAAGGTACTCCTCAATCTGAT-----
--TTTTGCAGCTTTGATCTTGCTTCTTAACATTGCTTTGTTGGTATTTGTATTTTCGCACATTGATTCATCGTAAATCTG
TTTACAATAGCTCGAGTGTTTGACCGCACTTACACCCTTATTTGCTTCAGGGAAGGAGCTGCAGAAGATGAAAGCTCTGA
ATGTGCTCGGCAAGCTTCCACCTGCCGAACATCCGTCACTACCAACTCAGCCAACTTTTGGTATGCGTCTGCCGTTCCAG
CCATTCCCAGCCCGCCGCTGAGAAGAGCTGAAAATCAGAT--GTCACTGCATGACGAGTGTCCTGACCTGAAGCTTTCTC
ATGACGAACTCTTGCCACCCCAACGCTGCATCATGGTCAGCATGTTTTTGCCTGCGTATGTCCA----------------
----AAGACTTAATGGTAGCTGAACAGACAACCCTCTCATGGTGCCGAAAGCGCATAATAGCGGTGCACCT-TGCCCGAA
CTTTGATGGATCTAAATGTAACCATGAACCCCATAGGTAGATAACTGCTGTGAACATGGGGCATGTGGTTCACAGACTCC
CCTAATCTCTGACCAGCATATTCAACGGGTTGCACTGACGTAGGCTGTGCCAGTATTATTCGTGTGTTGCATCTTGTTTA
ATTGCACGGGCGGGGATCAAGCCATCAAGGTAGGAACTCCGTCAGCAACAAATAATAGAAGTGCTAATTTGACTAAGAT-
--------------------------ATGCACCCTAACCATGACGGCACCACGACTATTAATAACAAGTTTATCGCTTAA
ATACAGATCGGGACAGGCATGCTCCCTCCCAACCAGCACATCATATTTGATCTTATGTTTATGCACGGTAGCAATGATAT
AGTTTTTGATCTTCTCTGATTCTCTCTATCTTCTCACTACTAGTTCTTGTAGACCAACAAATTCTCAATAATATGGAGAA
ATGGAGGTTTTACATGATACCTTGTCACTCAACGTAGACGGAGCCGCCATTTATGGAAGGAGGTTTTTACCTCTTTACTT
TGTTGTCATTTCTGTAACGTCGCTAGCATACTGAACCTCGGCCCCCTGAATTGAGCATGGCCATCAGGATATCAGATATT
TTCAAATCACACACACCATTCTAAGACTTCACGACATCGACGACGTCAAGGAGATCAAACTAGGCTTCCGAGCGTACCAT
TGGCGCAACAAAGTCGCGGAGGAATAAGCTTCCAAGCATACCATTGGCACAGCAAAGTCGAC-AGGAAGAAACTTTCAGC
AGCGAGCCTCCATGGGGGTACTTGCCCTGGTA
>chr5B_3
--ACACAGATAGTGGATTTGATTGGATTGGGTTGGATTGGGCGCTCGCTCTCACACGAGTTGGTTGCATTTTGCCACATT
CTGGTACTATCAGTATAGAATCCTGATTCATAATGCCTAGAAT-----TGACCTGACTGCATTGTGGATAAACACGTCCT
GTG----ATTA--------ACCTAGTCATGCCCTGTTTGTTTTCAACTTTTCATAGATAGAATAAGCGAGTCTTTCTCGA
TATATTTTCAATATACATGTGCTCGTCGCCGCCCCGCGGTGTTGTTCTTGGTGGAATGCCATCGACGGG-TTAGCCTTCC
CCCAATGCTCTTCATCTTCGGGTCAGGGAGGGCATGTAAAGCTGGCGTTTTTTACACAGATAGTGGTGGATTGGATTGGA
TTGGATTGGATGCTCTTACATGAGCTGATTGCATTTGCTTAATTACATTCTCTGGTACGCTTAATCCCGAGTGATAACAA
ATGCATAGAATTGACTTGATTGCGGAGTGGATAACACATCTTGTACTCCCTCCGTAGCTTGCAAAATGGTCTTACATTAT
GGGACGGAGGGAGTAGTTAACTTAGCCGTTGCCTGTTTGTTTTCACAGAAAAAATGAGTCC--TTTTCAGTATATATGTA
TGGACGAACAGTTCTTCCTTTTAGAGAGA-ATATGAATTGAGCTAAATCTGCATAAACCATAGCATTTCGCCAGTTGCTG
GGCACAATCTGAAATAACTAATCCCAGGTAGGTAGTAGAGAGAAGCTCAACTTTTTGTTGTATTGTACTGCTCGATGATT
TTCCACCCGAGCTCTGCACTCTAGCATTTTGTGGATAGCAGCATTAGTAAAGGTCGTGTGTAATCGTACAATGAGTACTA
GATTGTGACTTGAAACTG-----------------AATTTTCAGAATTTCAGTTGTGTTGATGGACCTACCAAGTTGGTA
CATGTTGATTGCGTAACTTGTTCTTTGCTGATATTCGTAGTACCTACTTTGCAAATTTCGTCACTGAT---GTGTAGA-T
TTTGAATCCAGATATCCAGGTTGATTGGCTGCAGTTCTGCAGAGGCACCATGCCTGCTGGTGACAACCCACACTCGATAT
CAGAGAAAAAGGCAGCACTGAGGGAGTCACCTAAGCAATCCAAGAATGACGCTAATCAGCAAGCCAGAGCTTCTACATTT
CCTAAAGACAAAGTTGCTGGGACCGTTGGCATCAAGAGGCCGCAACCTAACGCCCCCCTGAGCCTA---ACCAACCAGCA
CGCGCCAGGAAATCCTGGGGCAAATGGCCATCTCGTGTATGTGCGCAGGAAGCTTGAAACAGACCAAAGCAAAGGAGGCG
CTTCTGCTGGTGCAGAGAGTGCCAATTCTGTGAGCTCAAAGAAACCTGCTACTAGTGGACCGCAGGAGCAAAGTTTGAAG
CTTCAGAACAGTGCAACTCATGCCCAATCAGCTCCTATTTCCGCGTCTCCTGCTGCAGCTGCTGCTACCACCAATGCGTC
TCATACTCCATCAGTTCCTGTTTCCGCGTCTCCTGCTGCAGCTGCTGCTACCACCAATGCGTCTCATACTCCATCAGCTC
CTGTTTCTGCGCGTCCT---------GCTGCTGCAGCTGCCCCTGCTTTGCACCCTGCAAGTTTGCCGGCTCACCTTTCT
CTCGCGAAACAGTCTCCAGGAGTGGTTGCTGCTACTGCCCCTGCATTGCACCCTCCAACTTTGCCAGCTCACCTTTCTCT
TGCGAAACAATCTCCAGGGAAGGCTACTGTCCATCCAAGTGTTGTTGTGACTGCTAGTCCGCCGCACCGCAGTGTTGTGT
CTACTGCTATGCCTCAGAACTTTACGGCTCCCAATACATCGCCTTGTAATGTTGTGGCTACTAGTACAGCACCTCGTGAT
GCTGTGGCTACTGCTACGACACGTAATCCGACTGATTCACAAAGATCAGGGGATCAAGATTGGAAAGCGAGGTTTCTTCG
GCTGCAGGCATTCCTGAGAAATAACGAGCAATCAGGACAAGAAGAATACATCCGCAGTAAGTTCATTATTCTTAGCTGAC
AACAAATTCACCACAACTGCTATCTAAAACATGTGTCCTTTGTCTGAACTGTAGTGCTCCAGTCTTTGTCATCTGCTGGC
CGGAGCAAGCATGCCATTGAGCTGGAGAAGCGAGCAGTGAATCTCTTGATCGAAGAAGGTATTCTTCAATCTGATAAATT
TTTTTTGCAGCTTTGGACTTGCATGTTAACATTGCTCCA--GTTGTTTGTATTTTCAAATGTTGA-TCATCATGAATCTG
TTTACGATAGCTTGAGCGTTTGGTTTTACATGTTTCCTTGTCCCCTTCAGGAAAGGAGCTGCAAAAGATGAAAGCTCTGA
ATGTACTTGGGAAGCTTCCGCCCACCGACCATCCATCGCTACCAACTCAGCCAACTTTTGGTATGCGTCTGCCGTTCCAG
CCGTTCCCAGCCCGCCGCTGAGAAGAGCGGAAAATCAGATATGTC-----------AGTGTT-----CTGAAGCTTTCTC
ATGACGAACTCTTGCCACCGGAATGCTGCAACATGGTCAGCATGTTTTTGCCTGTGTGAGCATAAGCTTTTCATGCGTAT
GTCCAAAACCTAATGGTAGCTGAACAGACAGCCCTCTCATGGTGCCGAAAGCGCATAATAGCGGTGCACCTATGCCCGAA
CTTTGATGGATCTG-ATGTAACCATGAACCCCATGGGTAGATAACTGCTGTGAACATGGGGCATGTGGTTCACAGGCTCC
CCTAATCTCTGACCAGCATATTCAACGGGTTGCACTGACGTAGGCTGTGCCAGTATTATTCGGGTGTTGCATCTTGTTTA
ATTGCACGGGTGGGGATCAAGCCATCAAGGTAGGAACTCCGTCAGCAACAAATAAAAGAAGTGCTAATTTGACTAAGATG
CTTCATTATTGATGCTTATATATACAATACACCCTAACCATGACGACACCACGACTATTAATAACAAGTTTATCGCTTAA
ATACGGATCGGGACAGGCATGCTCCCTCCCAACCAGCACATCATATTTGATCTTATGTTTATGCACAGTAGCAATGATAT
AGTTTTTGATCTTCTCTGATTCTCTCTATCTCATCACTACTAGTTCTTATAGTCCAACAAATCCTCAATAATATGGAGAA
ATGGAAGTTTTACATGATGCCTTGTCACTCAACGTAAACGGA---GCCATTTATGGATGGAGGTTTTTACCTCTTTGCTT
TGTTGGCATCTCTGTAACTTAGTTAGCATACTGAACCTCAGCCGCCTGAATTGAGCATGGCTATCAGAATATCAGATATT
TTCAAATTACATACACCATTCTAAGACTTCACGACATCGACACCGTCAAGGAGATCAAACTAAGCTTCGGAGCATACCAT
TGGCGCAGCAAAGTCGCAGACGAAGGAGCTTCCAAGCATACCATAGGCGCGGCAAAGTCGTCGAGGAAGAAACTTTCAGC
AGCGCG-CTCCATGGGGGTACTTGTCCTGGTA
>chr5D_3
--ACACAGATAGTGGATTTGATTGGATTGGGTTGGGT-----GCTCGCTCTTACACGAGTTGGTTGCATTTTGCCACATT
CTGGTACTATCAGTGTAGAATCCTGTTTGATAATGCCTAGAAT-----TGACCTGACTGCAGAGTGGATAC-CACATCCT
GTA----ATTAACCTAGACACCTAGTCATGCCCTGTTTGTTATCA------------TA---------------------
--------------------------------CCGGCGGTGTGGTTCTTGGTCGAATGCCGTTCATGGGGTTAGCCTGCC
CCCAATGCTCTTCATCTTCGGGTCAGGGAGGGCATGTAAAGCTGGATAGTGG------------------------TGGA
TTGGATTGGATGCTCTTACATGAGCTGATTGCATTTGCTTAATTACATTCT--GGTGCCCTTAATCCTGACAGATAACAA
ATGTATAGAATCGACTTGATTGCGGAGTGGACAACACATCTTGTACTCCCTCCGTAGCTTGCAAAATGGTCTTACATTAT
GGGA-------AGTAGTTAGCTTAGCCGTGGCCTGTTTGTTTTCATAGAGAAAATGAGTCTTTTTTTCAGTATATATGTA
TGGACGAATAGTTCTTTCTTTTAGAGAGACATATGAATTGAGCTAAATCTGCATAAACCATATCGTTTCGCCAGTTGATG
GGCACAATCTGAAATAACTAATCCCAGGTAGGTAGTAGAGAGAAGCTGAACTTTTTGTTGTATTGTAATGTTCGATGATT
TTCCGTCCGAGCTCTGTACTCTAGCATTTTCTGGATAACAGCATAAGTAAAGGAC---TGTAATCGTACAATGAGTACTA
GAGTGTGACTGGAAACTGCATGACAAGTGTAGGCCAAATTTTGGCATTTCAGTGGTGCTGATGGACCTACCAAGTTGGTA
CTTGTTGATTGAGTAACTTGTTCGCTGCTGATATTCGTAGTACCTACTTTGCAAATTTCATCACTGAT---GTGGAGATT
TTTGAATCCAGATATCCAGGTTGATTGGCTGCAGTTCTTCAGAGGCACCATGCCTGCTGGTGACAACCCACACTCGATAT
CAGAGAAAAAGGCAGCACTGAGGGAGTCACCTAAGCAATCTAAGAATGATGTTAATCAGCAAGCCAGAGCTTCTACATTT
CCTAAAGACAAAGTTGCTGGGACCGTTGGCATCAAGAGGCCGCAACCTAACGCCCCCCTGAGCCTAACCACCAACCAGCA
CGCGCCAGGAAATCCCGGGGCAAATGGCCATCTCGTGTATGTGCGCAGGAAGCTTGAGACAGACCAAAGCAAAGGAGGCG
CTTCTGCTGGTGCAGAGAGTGCCAATTCTGTGAGCTCAAAGAAACCTGCTACTGGTGGACCGCAGGAGCAAAGTTTGAAG
CTTCAGAACAGTGCGACTCATGCCCAATCAGCTCCTGTTTCCGTGTCTCCTGCTGCAGCTGCTGCTACCACCAATGCGTC
TCATACTCCATCAGCTCCTGTTTCCGCGTCTCCTGCTGCAGCTGCTGCTACCACCAATGCGTCTCATACTCCATCAGCTC
CTGTTTCTGCGCCTCCTGCTGCTGCAGCTGCTGCTACTGCCCCTGCTTTGCACCCTGCAAGTTTGCCGGCTCACCTTTCT
CTCGCGAAACAGTCTCCAGGAGTGGTCGCTGCTACTGCCCCTTCATTGCACCCTCCAACTTTGCCAGCTCACCTTTCTCT
TGCGAAACAATCTCCAGGGAAGGCTACTGTCCATCCAAGTGTTGTTGTGACTGCTAGTCCGCCGCACTGCAGTGTTGTGT
CTACTGCCATGCCTCAGAACTATACGGCTGTCAATACATCGCCTTGTAATGCTGTGGCTACTAGTGCAGCACCTCGTGAT
GCTGTGGCTACTGCTACGACACGTAATCCAACTGATTCGCAAAGATCAGGGGATCAAGATTGGAAAGCAAGGTTTCTTCG
GCTGCAGGCATTCCTGAGAAATAATGAGCAATCAGGACAGGAAGAATACATCCGCAGTAAGTTCATTATTCTTTGTTGAC
AACAAATTTACCACAACTGCTATCTAAAACACGTGTGCTTTGTCTGAATTGTAGTGCTCCAGTCTTTGTCATCTGTTGGC
CGGAGCAAGCATGCCATTGAGCTGGAGAAACGAGCAGTCAATCTCTTAATTGAAGAAGGTACTCAATCTGA---------
-TTTTTGCAGCTTTGATCTTGCATTTTAACAATGCTTA-TTGGTATTTGTATTTCCGCACATTGATTCATCATAAATCTG
TTTACAATAGCTTGAGTGTTTGACTGCACTTACACCCTTATTTGCTTCAGGGAAGGAGCTGCAGAAGATGAAATCTCTGA
ATGTGCTCGGCAAGCTTCCACCTGCCGAACATCCATCACTACCAACTCAGCCAACTTTTGGTATGCGTCTGCCGTTCCAG
CCATTCCCAGCCCGCCGCTGAGAAGAGCGGAAAATCAGATATGTCACCGCATAACGAGTGTT-----CTGAAGCTTTCTC
ATGACAAACTCTTGCGACCCGAACGCTGCAACATGGTCAGCGTGTTTTTGCCTGTGTGAGCATAAGCTTTTCATGCGTAT
GTCCAAGACTTAATGCTAGCTGAACAGAGAACCCTCTCATGGTGCCGAAAGCGCATAATAGCCGTGCACCT-TGCCTGAA
CTTTGATGGATCTA-ATGTAACCATGAACCCTATAGGTAGATAACTGCTGTGAACATGGGGCATGTGGTTCACAGACTTC
CCTAATCTCTGACCAGCATATTCAACGGTTTGCACTGACGTAGGCTGTGCCAGTATTATTCGTGTGTTGCATCTTGTTTA
ATTGCACGGGTGGGGATCAAGCCATCAAGGTAGGAACTCCGTCAGCAACAAATAAAAGAAGTGCTAATTTGACTAAGATG
CTTCATTATTGATGCTTATATATACAATACACCCTAACCATGACGACACCACGACTATTAATAACAAGTTTATCGCTTAA
ATACGGATCGGGACAGGCATGCTCCCTCCCAACCAGCACATCATATTTGATCTTATGTTTATGCACAGTAGCAATGATAT
ATTTTTTGATCTTCTCTGATTCTCTCTATCTTCTCACTACTAGTTCTTGTAGACAAACATATTCTCAATGATATGGAGAA
ATTGAAGTTTTACATGATGCCTTGTCACTCAACGTAAACAGA---GCCATTTATGGATGGAGGTTTTTACCTCTTTACTT
TGTTCTCATTTCTGTAACGTCGCTAGCATACTGAACCTCGGCCGCCTGAATTGAGCACGGCCATCAGAATATCAGATATT
TTCAAATTACATACACCATTCTAAGACTTCACGACATCGACGCCATCAAGGAGATCAAACTAAGCTTCCGAGCATACCAT
TGGCGCAGCAAAGTCGCAGACGAAGGAGCTTCCAAGCATACCATAGGCGCGGCAAAGTCGTCAAGGAAGAAACTTTCAGC
AGCGAG-CTCCATGGGGGTACTTG--------
>SNPs
SS------------------------------------------S----S------------------------------
--------S----------------------------------SSSSS--------------------------------
---SSSS--------------------S----------------S----------------SS---------------S-
-S-------------S-----------S----------------------S-------------------------S---
-SS--------------------------------------------------------S---------S-------S--
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
S--------------------------------SSS-------------------------------------------S
------------------------------S------------------------------S--S---------------
--S--S----S----------------S----------------------------------------------------
-S------S-----------------------------------------------------------------------
----------------S---------------------------------------------------------------
---------S-----------------S----------------------------------------SSS---------
------------------S----S----------------------------S-----------S----------S----
--------------------------------------------------------------------------------
-----------------------S-----S--------------------S--------------S--------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
-----------------------S--------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-----------S-------------------------------------------
----------------------------------------S-S-------------------------------------
-----------S---------S----------S--------------S--------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
-----------------------S----------------------------------------S---------------
----------------------S-S------------SS--------------------------------S--------
------------S-----------S-------------------------------------------------------
----------------------------------S---------------------------------------------
----------------------------S------------------S----S--------SSSSSS-------------
--------------------S---------S-----------------------S--SS-SSS-----------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
----------S--------------------------------------------S------------------------
----------------------------S----------------S----------------------------------
----S-------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
-----S------------S-----------------S-----SSS------------S----------------------
-------------------------------------------S-----------------------S------------
-------S---S------------------------------S-------------------S----------S------
-------S---------S--S---SS------------------S---S-S---------S-------------------
------S-----------------S-------
>forward_809
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------GCTCGATGATT
TCCCACCCA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>reverse_2581
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------CAACGCTGCATCATGGTCAG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
