>input_sequence_52533
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-------------------------------------------------------------------ATGGCGACGACCA
AGCTGTCCCCGCTCTCGCCCGTGCGGCCGGACGACAAGCGGCGCGCGCCGGCGGCGTCGGTGGTGCTGAAGGTGCAGGAC
AGCTCGGCGGCCGAGGCGTACGAGCAGTACCTGCGGCTGCCGGAGCTGTCGAGGCTGTGGAAGGCCGCGTGCTGCCCGGG
CTGGCCCGACGAGGGCCTGGTCAAGCCCGCGCTGCAGGCGCTGGAGATCACCTTCCGCTTCGTGTCCGTCGCGCTCTCCG
ACCCGCGGGGCTACGCCAGCCGCCGCGAGCTGGCGCGGCGGCTCGAGTCGCTCGCCGCGCGGGAGGTGGAGGTGGTGGCC
GCGCTCTGCGAGGGGGACCGGGGCGCGCCGCTGGCCGAGCTGAGCGCGTCCGAGGGCGTGCTCCCCCGGGAGCGGAGCGC
CTCGGAGGTGTGGCAGCTGCCGGGGAGCACCGCCGCGGTGGTGTGTCACGCCAGCGAGTCCAGCCTGCTCCCGCGCCTCG
CCGCGTGGGACAAGTCGGAGACCCTGGCGGCCAAGATCAAGTACGCCATCGAGAGCCAGATGCAGGGCTGCGCCTTCTCC
CTCGGCCTCGGCGAGCCCAACCTCGCCGGCAAGCCGGTGCTGGAGTACGACCGCGTCGTGCAGCCGCACGAGCTGCACGC
CCTCAAGCCCAGGGTGGCGCCGGAGCCCAAGACCGGCTACCGCAACCGGGAGAACGAGGCGCTCTTCACCATCCACCAGA
TTCTTGAATCCTGGCTGTGCGCGGCGTCTCAGCTTCTCACCCGCCTGAACAGCCGGATCGAAGCGAAGGACTGGGAGGCG
GCGGCGAGCGACTGCTGGATCCTGGAGCGGATCTGGAAGCTGCTCGCCGACATCGAGGACCTGCACCTGCTCATGGACCC
GGACGACTTCCTGCGGCTCAAGAGCCAGCTGGCGATACGGTCGGCGCCGGACGGCACCGACGCGTCCTTCTGCTTCCGGT
CCAGAGCGCTGCTGCACGCCGCGAACGCCACGAGGGACATCAAGAAGCTGGTGCCGTGGGTGATCGGCGTCGAGGTGGAC
CCCAATGGCGGGCCGAGGGTGCAGGAGGCGGCCATGAGGCTGTACCACGGCCGGAGGCGCGGCGAAGGCGAGGACGCCGG
CAAGATCGAGCTGCTGCAGGCTTTCCAGGCCGTGGAGGTGGCCGTGCGGAGGTTCTTCTTCGCGTACCGGCAGGTCGTGG
CGGCGGTGTGTGGCACGGCGGAGGCGTCGGGCAACCGGGCGCTGTTCGTGCCGGCGGAGGGGACGGACCCGCTGTCGCAG
ATGTTCCTCGAGCCGCCCTACTTCCCCAGCCTCGACGCCGCCAAGACGTTCTTGGCCGACTACTGGGTTCAGCACATGGC
CGCCTCCTCTGTTCCGTCAGGGCGCAGCTGA-------------------------------------------------
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>chr3D_1_TraesCS3D01G361800
GTTGTAGATACTTTAAAT--------------------------------------------------------------
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----------------------------------GATCTTATATT-TTTTACAGGGTTATATTTATTTATAGAGGGAGTA
CTACCCACTTCGTTAGAGCAGTCTACGGTTCCGCGGGCGAGATCATCTTCATGCT------------------------A
TGCGACTAAAAAGCATTAGAAAACCACTTGACCTTTGGATATAATAGTGCTCAATAACCAAAGAAAGAACAAGAAAGTCA
CAAAAGTCAACTGCCGAAAGCCGTCCAAACCGAATCCAGGAAGCATTTCAATGGAAGCAAGTACATGGTA-AATCCCAAA
ACCAAAAACAATGGCTGCTGTAGCTTACGACATTGCCGACCAATATCACAAACTATATTAACGTCGCTCTCCGCTTGCTA
GGGAAAAATTAGTCTTCCGCCTACAGAAT--TACCTATGCAAGCAAAGGAGAAATGGATGAAGTTTTCCCACTAAATTAA
GCGATAATAATCCAAAAAAA-TGATAATCCCAACGTCTTTTACGGCGAACCTCGTGCCGGCCCTGGATGGATGGATGGAT
GGGCAGCTGCGGATAGATAGAGACGGCCGCGTTCCACGAGGTACAAGGACGTGCTCTGAGCTGCCCGAACGCAAGAAAAC
ACCACGATTCACGACGACTCGGACAGCACAAAACCGCATCGCATCGCGCATCACAGCTGATGACAG----CCAGCCCACG
--------------TCTCCGGATAAGCTCGGAGCGCCTTTTCTTCCTCCTCGCT-----AATTTCAATGGCTTTC-GCGT
GCCGCCCCGCGCCCACCCCCGCGGTTTGAGAGACATCATTTTCAAACCACCCCGCACCGCGGTCCACACGCCACGCGCG-
---------AGCTCAGCTCCTCCCTATCTATAAGACCATACGGGCACGACGAGCAGTATATAAGCAGCCTCACCTTCTAA
TCCTCGAGGCCACATCCGACCCGAGACCAGAACACGTG----------------------------CGAGCAAGGAGTGG
TAGAAATTTCAAACGAGAGGTTGTTAGTTAACCCGAGAGTTGAGGAGCTGGAGCAGTGCTGAAGGAAATGGCGACGACCA
AGCTGTCCCCGCTCTCGCCCGTGCGGCCGGACGACAAGCGGCGCGCGCCGGCGGCGTCGGTGGTGCTGAAGGTGCAGGAC
AGCTCGGCGGCCGAGGCGTACGAGCAGTACCTGCGGCTGCCGGAGCTGTCGAGGCTGTGGAAGGCCGCGTGCTGCCCGGG
CTGGCCCGACGAGGGCCTGGTCAAGCCCGCGCTGCAGGCGCTGGAGATCACCTTCCGCTTCGTGTCCGTCGCGCTCTCCG
ACCCGCGGGGCTACGCCAGCCGCCGCGAGCTGGCGCGGCGGCTCGAGTCGCTCGCCGCGCGGGAGGTGGAGGTGGTGGCC
GCGCTCTGCGAGGGGGACCGGGGCGCGCCGCTGGCCGAGCTGAGCGCGTCCGAGGGCGTGCTCCCCCGGGAGCGGAGCGC
CTCGGAGGTGTGGCAGCTGCCGGGGAGCACCGCCGCGGTGGTGTGTCACGCCAGCGAGTCCAGCCTGCTCCCGCGCCTCG
CCGCGTGGGACAAGTCGGAGACCCTGGCGGCCAAGATCAAGTACGCCATCGAGAGCCAGATGCAGGGCTGCGCCTTCTCC
CTCGGCCTCGGCGAGCCCAACCTCGCCGGCAAGCCGGTGCTGGAGTACGACCGCGTCGTGCAGCCGCACGAGCTGCACGC
CCTCAAGCCCAGGGTGGCGCCGGAGCCCAAGACCGGCTACCGCAACCGGGAGAACGAGGCGCTCTTCACCATCCACCAGA
TTCTTGAATCCTGGCTGTGCGCGGCGTCTCAGCTTCTCACCCGCCTGAACAGCCGGATCGAAGCGAAGGACTGGGAGGCG
GCGGCGAGCGACTGCTGGATCCTGGAGCGGATCTGGAAGCTGCTCGCCGACATCGAGGACCTGCACCTGCTCATGGACCC
GGACGACTTCCTGCGGCTCAAGAGCCAGCTGGCGATACGGTCGGCGCCGGACGGCACCGACGCGTCCTTCTGCTTCCGGT
CCAGAGCGCTGCTGCACGCCGCGAACGCCACGAGGGACATCAAGAAGCTGGTGCCGTGGGTGATCGGCGTCGAGGTGGAC
CCCAATGGCGGGCCGAGGGTGCAGGAGGCGGCCATGAGGCTGTACCACGGCCGGAGGCGCGGCGAAGGCGAGGACGCCGG
CAAGATCGAGCTGCTGCAGGCTTTCCAGGCCGTGGAGGTGGCCGTGCGGAGGTTCTTCTTCGCGTACCGGCAGGTCGTGG
CGGCGGTGTGTGGCACGGCGGAGGCGTCGGGCAACCGGGCGCTGTTCGTGCCGGCGGAGGGGACGGACCCGCTGTCGCAG
ATGTTCCTCGAGCCGCCCTACTTCCCCAGCCTCGACGCCGCCAAGACGTTCTTGGCCGACTACTGGGTTCAGCACATGGC
CGCCTCCTCTGTTCCGTCAGGGCGCAGCTGAAAGTTTGGAACGCGGCCAGATGCC--------------CCACTTGCCAC
CCCGACGACCCGTAATTTTGCAGGCT-AGAAGT-----TACCTATGATCCCCAGCCTGCAATCATATAGTGATTCATTTC
AGTGGCGATAGATGAGTACATATACTCCTACATGTATCTG-------TTGTGATACCATCTGTTCTAGTGTTAC------
--GTATTTAACTGAGAGACATTCAATTAGATCAAGTAGCCTGATGCAATTTCATTTGCGGTTTGTTTAATGTAAATATGT
TTTGGTTAGATTATGGTTGGTCGATGAAGAAAACAGTTCGTTATAGTGCACCGTCCCGAGCGAATGATACAAGGCACTCT
CTATGATGGAGCATGTCAATTAATGAAATTACGGTAACTTCTCTGGATAGCATGACACAATTGCTGGACATGGGCAACTT
TTCATTTTCTTTTTCGACAAAAGGTGGATTTTATTGGCTCAATACAGAGCATCAAAGGGATACAAACATAAAGAGCATAC
ACCTGGCATCTGCATAGTTAGGATGCACACAATTAACACGGACACACGCACACAAAAATCACACCAGCAATTAGCAAAGT
CATACATGACCGAAACTATGCCAAGGCGGATAAAAAACAAAAAGAAAGTGAAAAAAAGAGCAACGAG--------CATGC
CGAGCAGGTGTTGAGCCAAAAGAAGATGGTGCAAGCACACGCGCTCCGTATGTGGACACGGCCACTCAGACTAAACGCGA
CAC---------AAAGCGGCCTG----CCAAAGACCGTCCGCGGAACCAGAACCTCCGTCGACGTTGGAGTGACATCACT
TGCAGCTCAAACGGTAAGAAGAGATGGTGCCGCCAAAATCTCATGCAGACTCTTTGGTGATCCCATGCCTCTGGTGCAAG
TGTTTGTCGATGGTAAATCTTGGCATGAACACTGGCCCGAGACAATACACCATGAACCTACATTGCGCCGCCATGGTTGC
AACAAGCT-ATCAATATCATCGAACATTACCCCGGCCATGTGCACCGC
>chr3B_14
ATGCAACTATAAACCCTTAGAAAAGCAGTTGACCTTTGGAGTATAATAGTGCTCAATAACCAAAGAAAGAAAGCCACTAA
AGTCAACTGCCAAAAGCCGTCCTAGCCGAATCCAGGAATCATTTCAATGCAAGCAAGTACTACATACAATGTAACTCCCC
AAATGAAAAACAATGACTGCCGTAGCTTACGACATTGCCGACAAATATCACAAACTATATTAACCTCGCTTGCCGGGGTA
AACTTAGTCTCCTCCTACATAATTACCTACGCAAGCAAAGGAAAAAATGGTTGAATTTTCCCTTGTAAATTAAGTGATAA
TAGCAACATCTTTTAAGGCAAAAATTTGGGAGTCATCTTGGCTGCAGGGTCTCATACCCAAAGACATTGCTCCAAAGATT
TTTGAGATATCCGGCAAGAAAGGTGGATCTGTAGCAACGACCTTAAGGAAAGGGCACTGGATAACTCAAATCGATATCCA
AAGCGGCTTGACGCTTGAGCACCTTCAACAATTCGCAGCCCTCTAGGAGAAGCTTGTGAGCATCGTCATCTAGTCAGGCG
TCAAGGATACCATTATATGGAAGCTCGCAACGATGAAAACTACTCGACTAAGTCTGCTTATATGACGTAGTTTACTGGAT
TCACACGCTCAAGCTTACATGTTACAGTCTCGAAGGCTAAATTCTTTGCATGGCTAGTCATTTGTAACAAGATTTGAGCT
ATGGATAAGCTCTAACGTCGAGGATGGCCAAACTGCAACCAATACCCGTTATGCAATCAAGTGCAAGAATTTGTGGCTCG
CCCTGTTTCCAAATGCAAGCTCTCTATCCATGTTTGAAATGAGTTGTTCTCCTGGCTTAACCTTTATATCTCCACGACTC
TTTGGCATCGGTTTGGCATGGTTAAATTGTTGAAAATATGAGCAAGTTATTACGAGATTTAATCCGAATAAGCACAAAAT
AAATCACGACGATTATAACAAAGATTAAACTAATCATGTGGACTAGTATAGTAGATGAATAGATCAAATCTAGGGCACAG
ACTAGAACTAAGAATTCTAGCACGATCTTGAACAAGGAGGACAAGATCACATATGGTTATACCTGGCCATCTGTCGGGCC
GGGCCAGGCTTTGGGCCGGGCCTGCCAAAGCCCGATGCAAAAAACGAGGCCCGAGCCTGGCTTGGCCTAAAAATCAAGCC
CGAGCCCAGTCCATCACGCTAAAAGCCCGCCAGGCCTCGGGTCGGGCCTCTTCCTTAAACAACGATTTTGATGGGCCCGA
GCCCGGCCCGACCCGGCTGTTGGGCTCAAAATCTAGGCCCGAGCCCGGCCCGTGGTCAAGGCTGGGTCGGGCTTTTTCGG
GCAGGGCTACATACGGTGTAGCGGGAGCAGGACCGCCAACATTGATGTTGTCGCCCAGGTCGTTGAGGAAGAGGTTGCCG
AGGTCGGGAAAGAAGTCATCGCTGCCAGCAGTCGTGCGAGTGCGCTCCCCAAAAACCTGATTGCCCTCTCCCGTACAGGA
TCACGAGAGGCGGGGTTCCGGAAGCCTGTTGTCCCTTCTCGCGGTGCACATCGAAAGGAGGGATGGAGAAGACTTGCATG
GCGACGCAATGATCTGGAACGATGATGCGAAACCATGCGATACGACACAACTAGGGTAGACATCTGCCTGACTATATAAT
GCGGGTCGGGTAGGTTGTGGGAGTAAGACGTGCATAGCTATGTCCTCAGCTTGGCTCATTCCCGCAACCCGCATCGCGCC
GAGGCGTGGCATGGCCAGGCGAGCAAGGAGAAGGAGCGCGCGTGTAGGCCTCCTCTTCTCATGCTCATACAAGTGGTCGA
AGATCTCACCTTATAAAAAGGTGCAAGTCTCTCTCAACTTCCGGGATGGGACTAAACTTTAATCTCACTCACACCACTCA
CATGTGTGCATGACTGGGCCAAGAGAATTTCAGAATTTTAGTTGGGCGTTGGCCAAAGGCCCATTAGCAAATTCCAACAT
AAATTTTGGTGGGATGAGCTCCTCACTAACAATGCTCAATCAGTGAAAGCCTTATCTTCTCTACCGCTACTCGTGGGATG
GGAAATCTAGAAGAAAAGGAATGCACACGTCTTCAGGAGCAGCAAGGCGGCGCCGGTGGTGATCATCACGTGGAACATCA
AAAATGAAGTGTCTCCTTGGGCCATTGCGGGTGACAAGTATTTGAGTAATGTAATGTCACAAGAGTAATCTGTTTAGACT
TTTGTCATTTGACGGCGTGTGTGTAACAAAACTCCATTCTTAATTAATGAAAATGACAAGTCTTTACCTTGTTTCATAAT
TTTTTAGTATTGGTTGATGCGATCTATCCTTACTTCAAGTAGTTGGTCAGGCTTCTTGAAGTGAAACCTGCCCAGGCAAT
TCAAGGAGTCTCCTAATTAATGAAAGAAGACAATATTTGTGTTCAAATGTATGTAGCCGCTTAAAAGAATGAAACAAAAA
ATTGTCAAATAGTGTTTACTCTGGTGATCTAAATGATCTTATATTCTTTTACATGGTTATATTTCTTTATAGAGGG-GTA
CTACCCAATTCATGGGAGCAGTCTACACTTCGGCGGGTGAGGTCATCTTCCTGCTCACCCCTCCGAGGGGATAAAAAGAA
TGCGACTAAAAACCCG-----------TTGAACTTTGGATATAATAGTGCTCAATAACCAAAGA------AAGAAAGTCA
CAAAAGTCAACTGCCGAAAGCCGTCCAAACCGAATCCAGGAAGCATTTCAATGGAAGCAAGTACATGGTAAAATCCCAAA
ACCAAAAACAATGGCTGCTGTAGCTTACGACATTGCCGACCAATATCACAAACTATATTAACGTCGCT-------TGCCA
GGGAAAAATTAGTCTTCTGCCTAAGAATTACTACCTACGCAAGCAAAGGAGAAATGGATGAAGTTTTCCTACTAAATTAA
GC--------------------GATAATCCCAACATCTTTTACGGCGAACCTTGTGCCGGCCCA----GGATGGATGGAT
GGGCAGCTGCGGATAGATAGAGACGGCCGCGTTCCACGAGGTACAAGGACGTGCTCTGCGCTGCCCGAACGCAAGAAAAC
ACCACGATTCACGACGACTCGGACGGCACAAAACCGCATCGCATCGCGCATCACAGCTGATGACAG----CCCGCCCACG
CCTCCCTCCCTCCCTCTCCGGATAAGCTCGGAGCGCCTTTTCTTCCTCCGCGCT-----AATTTCAATGGCTTTCTGCGT
GCCACCCCGCGCCCACCCCCGCGGTTTGAGAGACTTCATTTTCAAACCACCCCGCGCCGCGGTCCACACGCCACGCGCTA
GCTCAGCC----------CCTCCCTATCTACACGCAC-----------ACGAGCAGTATATAAGCAGCCTCACCTTCTAA
TCCTCGAGGCCACACCCGACCCGAGACCAGAACACGAGCAAGAAACAAGCAACGAAGTTTCTGTTTCGAGCAAGGAGTGG
TAGAGATTTCAAACCAGAGGTTGTTAGTTAACCCGAGAGTTGAGGAGCTGGAGCAGTGCTGAAAGAAATGGCGACGACCA
AGTTGTCCCCGCTCTCGCCTGTGCGGCCGGACGATAGGCGGCGCGCGCCGGCGGCGTCGGTGGTGCTGAAGGTGCAGGAC
AGCACGGCGGCCGAGGCGTACGAGCAGTACCTGCGGCTGCCGGAGCTGTCGAGGGTGTGGAAGACCGCGTGCTGCCCGGG
CTGGCCCGACGAGGGCCTGGTCAAGCCCGCGCTGCAGGCGCTGGAGATCACCTTCCGCTTCGTGTCCGTCGCGCTCTCCG
ACCCGCGGGGCTACGCCAGCCGCCGCGAGCTGGCGCGGCGGCTCGAGTCGCTCACCGCGCGGGAGGTGGAGGTGGTGGCC
GCGCTCTGCGAGGGGGACCGGGGTGCGCCGCTGGCCGAGCTGAGCGCGTCCGAGGGCGTGCTCCCGCGGGAGAGGAGCGC
CTCAGAGGTGTGGCAGCTGCCGGGGAGCGCCGCCGCAGTGGTGTGTCATGCCAGTGAGGCCAGCTTGCTCCCGCGCCTCG
CCGCGTGGGACAAGTCCGAGACCTTGGCGGCCAAGATCAAGTACGCCATCGAGAGCCAGATGCAGGGCTGCGCCTTCTCC
CTCGGCCTCGGCGAGCCCAACCTCGCCGGCAAGCCGGTGCTGGAGTACGACCGCATCGTGCAGCCGCACGAGCTGCACGC
CCTCAAGCCCAGGGTCGCGCCGGAGCCCAAGACCGGCTACCGCAACCGCGAGAACGAGGCGCTCTTCACCATCCACCAGA
TTCTTGAATCCTGGCTGTGCGCGGCGTCTCAGCTTCTCACCCGCCTGAACAGCCGGATCGAAGCGAAGGACTGGGAGGCG
GCGGCGAACGACTGCTGGATCCTGGAGCGGATCTGGAAGCTGCTTGCCGACATCGAGGACCTGCACCTGCTGATGGACCC
GGACGACTTCCTGCGGCTCAAGAGCCAGCTCGCGATACGGTCGGCGCCGGACGGCACCGACGCGTCCTTCTGCTTCCGCT
CCAGAGCGCTGCTGCACGCCGGGAACGCCACCAGATACATCAAGAAGCTGGTGCCGTGGGTGATCGGCGTGGAGGTGGAC
CCCAATGGCGGGCCGAGGGTGCAGGAGGCGGCCATGAGGCTGTACCACGGCCGGAGGCGCGGCGAAGGCGAGGACGCCGG
CAAGATCGAGCTGCTGCAGGCTTTTCAGGCCGTGGAGGCGGCCGTGCGGAGGTTCTTCTTCGCGTACCGGCAGGTCGTGG
CGGCCGTGTGTGGCACGGCGGAGGCGTCGGGCAACCGGGCGCTGTTTGCGCCGGCGGAGGGGACGGACCCCCTGTCGCAG
ATGTTCCTCGAGCCGCCCTACTTCCCCAGCCTCGACGCCGCCAAGACGTTCTTGGCCGACTACTGGGTTCAGCACATGGC
CGCCGCCTCTGTTCCGTCAGGGCGCAGCTGAAAGTTTGGAACGGCCAAATACCGCCGCTAGATGGGTTGCCACTTGCCAC
GGCGACGACCCGTGATTTTGCTGGCT-AGAAGTTACAGTACCTATGATCCCCAGCCTGCAATCATATAGTGATTCATTTC
AGTAGCGGTAGACGAGTACATATACTCAGACATGTGTGTGTTGTGACTTGTGGTGCCATCTGTTCTAGTGTCCTATTACA
GAGTATTTAACGGAGATACATTCAATTATATCAAGTAGCCTGATGTAACTTCATTTGCGGTTCGTTTAATGTAAATACAT
TTTTTGTTAGATATGGTTGGTCGATGAAGAAAACAGTTCGTTAT------------------------------------
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>chr3A_140
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--------------------AAACCAGTTGACC-TTGGATATAATAGTGCTCAATAACCAAAGA------AAGAAAGCCA
CAAAAGTCAGCCACCGAAAGCCGTCCTAGCCGAATACAGGAAGCATTTCAATGGAAGCAAGTACATGGTAAA-TCCCCAA
ACGAAAAACAATGGCGGCCGTAGCTTACGACATTGCCGACCAATATCACAAACTATTTTAACGTCGCT-------TGCTA
GGGCAAAATTAGTCTTCA-CCTACAGAAT--TACCTACGCAAGCAAAGGAGAAATCGATGAAGTTT-CCCACTAAACTAA
GCGATATATAATAAAAAAAGGTGATAATCCCGACGTCTTTTACGGCGAACCTCGTGCCGGCCCAGGATGGATGGATGGAT
GGGCAGCTGCGGATAGATAGAGACGGCCGCGTTCCACGAGGTACAGCGACGTGCGCTGCCG-----GAACGCAAGAAAAC
ACCACGATTCACGACGACTCGGACGGCACAAAACCGCATCGCATCGCGCATCACAGCTGATGACAGCCAGCCCGCCCACG
CCTCCCTCCCTCC--CTCCGGATAAGCTCGGAGCGCCTTTTCTTCCTCCGCGCTTCCCTAATTTCAATGGCTTTCTGCGT
GC--------GCCCACCCCCGCGGTTTGAGAGACTTCGTTTTCAAACCACCCCGCGCCGCGGTCCACACGCCACGCGCTA
CCTCAGCTCAGCTCAGCTCCTCCCTATCTATACGCCC-----------ACGAGCAGTATATAAGCAGCCTCGCCTTCTAA
TCCTCGAGGCCACACCCGACCCGAGA-----------GCAAGAAACAAGCAACGAAGTTTCTGTTTCGAGCAAGGAGTGG
TAGAGATTTCAAACGAGAGGTTGTCAGTTAACCCGAGGGTTGAGGA-----------GCTGAAAGAAATGGCGACGACCA
AGCTGTCCCCGCTCTCGCCTGTGCGGCCGGACGACAAGCGGCGCGCGCCGGCGGCGTCGGTGGTGCTCAAGGTGCAGGAC
AGCTCCGCGGCCGAGGCGTACGAGCAGTACCTGCGGCTGCCGGAGCTGTCCAGGCTGTGGAAGGCCGCGTGCTGCCCGGG
CTGGCCCGACGAGGGCCTGGTCAAGCCCGCGCTGCAGGCGCTGGAGATCACCTTCCGCTTCGTCTCCGTCGCGCTCTCCG
ACCCGCGGGGCTACGCCAGCCGCCGCGAGCTCGCGCGGCGGCTCGAGTCGCTCGCCGCGCGGGAGGTGGAGGTGGTGGCC
GCGCTCTGCGAGGGGGACCGCGGCGCGCCGCTGGCCGAGCTGAGCTCGTCCGAGGGCGTGCTCCCGCGGGAGCGGAGCGC
CTCGGAGGTGTGGCAGCTGCCGGGGAGCGCTGCCGCAGTGGTGTGTCATGCCAGTGAGGCCAGCTTGCTCCCGCGCCTCG
CCGCGTGGGACAAGTCCGAGACCCTGGCGGCCAAGATCAAGTACGCCATCGAGAGCCAGATGCAGAGCTGCGCCTTCTCC
CTCGGCCTCGGCGAGCCCAACCTCGCCGGCAAGCCGGTGCTGGAGTACGACCGCGTCGTGCAGCCGCACGAGCTGCACGC
CCTCAAGCCCAGGGTCGCGCCGGAGGCCAAGACCGGCTACCGCAACCGGGAGAACGAGGCGCTCTTCACCATCCACCAGA
TTCTTGAATCCTGGCTGTGCGCTGCGTCTCAGCTTCTTACCCGCCTGAACAGCCGGATCGAGGCGAAGGCCTGGGAGGCG
GCGGCGAGCGACTGCTGGATCCTGGAGCGGATCTGGAAGCTGCTCGCCGACATCGAGGACCTGCACCTGCTCATGGACCC
GGACGACTTCCTGCGGCTCAAGAGCCAGCTCGCGATACGGCCGGCGCCGGACGGCACCGACGCGTCCTTCTGCTTCCGGT
CCAGAGCGCTGCTGCACGCCGCGAACGCCACGAGGGACATCAAGAAGCTGGTGCCGTGGGTGATCGGCGTGGAGGCGGAC
CCCAATGGCGGGCCGAGGGTGCAGGAGGCGGCCATGAGGCTGTACCACGGCCGGAGGCGCGGCGAGGGCGAGGAAGCCGG
CAAGATCGAGCTGCTGCAGGCTTTCCAGGCCGTGGAGGCGGCCGTGCGGAGGTTCTTCTTCGCGTACCGGCAGGTCGTGG
CGGCGGTGTGTGGCACGGCGGAGGCGTCGGGCAACCGGGCGCTGTTCGTGCCGGCGGAGGGGACGGACCCGCTGTCGCAG
ATGTTCCTGGAGCCGCCCTACTTCCCCAGCCTCGACGCCGCCAAGACGTTCTTGGCCGACTACTGGGTTCAGCACATGGC
CGCCGCCTCTGTTCCGTCAGGGCGCAGCTGAAAGTTTGGAGCGGCCAAATACCGCGGCTAGATGGGTTGCCACTTGCCAC
GCCGACGACCCGTGATTTTGCAGGCTTAGAAGT-----TACCTACGATCCCCAGCCTGCAATCCTACAGTGATTCATTTC
AGTGGTGATAGATGAGTACATATACTCATACATGTGTGTGTTGTGACTTGTGATGCCATCTGTTCTAGTGTCCTATTACA
GAGTATTTAACGGAGAGACATTCAATTAGATCAAGTAGCCTGATGTAATTTCATTTGCGGTTCGTTTAATGTAAATACAT
TTTT-GTCAGATATGGTTGGTCGATGAAGAGAACAGTTC-----------------------------------------
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>chr7D_2819
TTCATGTACTT---------------------------------------------------------------------
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---------TTTGTCGACAAAGGGTTGATTTTATTAGCTCAATATGGAGCATCAAGAGGATACAAACACATAGATCACAC
ACCCGGCATCTGCATAGTTAGGATGCACACATAGTCAAC--ATGAACGCACAAAAAAATCACACCAACAACTAGCAAAGT
CATACAAGACCAAAGCTATGTCAAGGCAGATAGAAAAAAAAG---------------GAGCAACA----GTAATCCACAC
CGAGAAGGTGTTGAGCCATAATA--------CAAGCGCTTGTAATCCGGACGTGGACACAACCACATGGACTAAACACCC
ACACACACTATGCAAGCACCCTATCCACCAAGGACGCTCCGCGAAACCAGAACCTCTGTTGACGCTAGGGTGACGCCAGT
CGCAGCTCAAATGGCGAGAAGAGACGGTACCGCCAAAATCTCATTGAGACGCTCCAACGATCGCACGCCTCCGATGCAAG
TGTTTGTCGATGGTAAATCTTGGCATGACCACTGGCCCCAGACAATACACCATGGGCCTACACTGCACCGCCATGGCTGC
AGCAAGCC-GTTAATATCGTCGAACATGACCC-GGTCATCTGCACCGC
>chr3D_2828
TTTTTC--------------------------------------------------------------------------
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----------------ATAAAGAGTGGATTTTATTAGCTCGGTATGAAGCATCAAGGGGATACAAACACAAAGAGCACAC
ACCCGGCCTCTGCATAGCTAGGATGCATACAACCAACATAGATGCACGCACACAAAAATCACACCAGCAATTAGCAAAAT
CATACAAGACCGAAGCTATGCCAAGGCGGATAGAAAAAAAAAGTG------AAAAAAGAGCAACG----ATAATTCATGT
AGAGCAGGTGTTGAGCCAAA-GAAGATGGTGCAAGTGCATGTGATCCGTATGTGGACACGACCACTCGGACTAAACGCGA
CCC---------AAAGTGGCCTG----CCAAAGACCGTCTGCGGAACCAGAACCTCTATTGACGTTGGAGTGACATCAGT
CGCAGCTCAAATGGCGAGAAGAGATGGTGCTCCCAAAATCTCGTGGAGACGCTTTGGCGATCCCATGCCTCCGGTGCAAG
TGCTTCTTGATGGTAAATCTTTGCATGACCACTGGCCCCAGACAATACACCACGAGCCTACACTGTGTCGCCATGGTTGC
AACAAGCC-AACAATATCGTCAAACATTACCC-GGCCATCTGCACCGC
>chr5D_2828
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---------TTTTTCAATAAAGAGTGGATTTTATTAGCTCAATATGAAGAATTAAGGGGATACAAACACAAAGAGCACAC
ACCCGGCCTCTGCATAACTAGGATGCACACAGCCAACACAGACGCACGCACACAAAAATCACACCAGCAATTACCAAAGT
CATACAAGACCGAAGCTATGCCAAGGCGGATAGAAAACAAAAAGAAAGTGAAAAAAAGAGCAACG----GTAATCCATGC
CGAGTAGGTGTTGAGCCAAAATAAGATGGTGCAAGTGCATGTAATCTGTATGTGGACACGACCACTCGGACTAAACGCGA
CAC---------AAAGCGGCCTG----CCAAAGAACGTCCGCGGAACCAGAACCTCCGTTGACGTTGGAGTGACATCAGT
CGCAGCTCAAATGGCGAGAAGAGATGGTGCTGCCAAAATCTCATGGGGACGCTTTGGCGATCCCATGCCTCCGGTGCAGG
TGTTTGTCGATGGTAAATCTTGGCATGACCACTGGCCCCGGACAATACACCACGAGTCTACACTGCGCCGGCATGGTTGC
AATAAGCC-GTCAATATCGTCGAACATTACCC-GGCCATCTGCACC--
>chr4D_2828
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---------TTTTTCGACAAAGGGTGGATTTTATTAGCTCAATATGGAGCATCAAGGGGATACAAACACAAAGAGCACAC
ACCCGGCCTCTGCATTGCTAAGATGCACACAGCCAATGCAAACGCACACACACAAAAATCACACCGACAACTAGCAAAGT
CATAC--GACCGAAGCTATGCCAAGGCGGATAGGAAAAAAAAAG----TGAAAAAAAGCA-------ATGTAATCCACGC
CGAGCAGGTGTTGATCCAAAAGAAGATGGTGCAAGCGCACGTGATCCGAACGTGGACACAACCACGTAGACTAAACGCG-
-CACGCACTATGAAAGCGGCTTG----CCAAAGACCGTCCGCGGAACCAGAACCTCCGTCGATGTTCAAGTGACATCGGT
CGCAGCTCAAATAGCAAGAAGAGATGGTACCGCCAAAATCTCATTGAGACGCTCCGGTGATCCCATGCTTCCGATGCAAG
TGTTTGTCGATGGTAAATCTTAGCATGACCATGGGCCCCAGACAATACACCACGAGCCTACACTGCGCCGCCTTGGCTGC
AACAAGCC-GTCAATATCATCGAAGATGAC------------------
>chr3D_2897
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------------------------------------------------------------------------------AC
ACCCGGACTCCGCATAACTAGGATGCACACAGTCAACACGGACGCACACACACTGAAATCACACCAACAATTAGCAAAGT
CATAGAAGACCGGAGCTATGCCAAGACGGATAGAAAACAAAAAGAAAATGAAAAAAAGAGCAACGATATATAATCCATGC
CGAGCAGGTGTTCAGCCAAAAGAAGATGGTGCAAGCACACGTGATCCGTATGTGGACATGACCACTCAGACTAAACGCAA
CAC---------AAAGCGGCCTG----CCAAAGACCGTCTGTGGAACTAGAACCTCTGTCGACATTGAAGTGACATCAGT
CGCAGCTCAAATGGTGAGATGAGAAGGTGCCGCCAAAATCCAATGGAGACGGTTTGGCGATCCCATGCCTCCAATCCATG
TGTTGGTCGATGGTAAATCTTGGCATGAACACTGGCCCCAGACAGTACACCACGAGCCTACACTGCGCCACCATGGTTGC
AACAAGCCTGTCAATATCGCCGTACATTACCC-GGCAATCTGCACCGC
>SNPs
S--S--S-SSSSSSSSS---------------------------------------------------------------
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-----------------------------------------------------S----------S-----------S---
-------S---S-SS-----------SS---S-----S---S--------S-----------------------------
------------S-SSSSSS------S-------------------------------------SSSSSS----------
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--------------------------------------------------------------------SSSSSSS-----
-----------------S-------------------S------------------------------------------
------SSS-SSS------S-------------------------------------------S----------------
----------------------------------------------------------S---------------------
------------------------S-----------------------------------------------S-------
-------------------------------------------------S------------------------------
---S------------------------------S--------------------S----------------------S-
--------------------------------S-S--SSSSSSSSSSS--------------------------------
--------------S---------------------S-------------------------------------------
----S----------------------------------------------------------S----------------
-------------------S------------------------------------------------------------
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-----------------------------------------------------------------S--------------
----------------------------S-------S-----------S-----S---S-----S---------------
----------------S---------------------------------------------------------------
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---------------S----------------------------------------------------------------
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------------------------------S-------------------------------------------------
----------------------------------------------------------------------S---------
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--------------------------------------S-----------------------------------------
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----S--------------------------------------SSSSS-S-SSS--------------------------
S------------S------------------------------------------------------------------
---------------------------S-------S-S----------------S----------------SSS------
-----------S---------------------------------S----------------S--------------SS-
---SSS-SSSS---------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS------------S-------------S--------SS---------S------------S--------S--
---S-----------------------------S---------S------------------------------------
------S-------S-----------------S---------------------------------S-------------
-----------------------------------------S-S----------------S-------------------
------------------------------------------------------------------------------S-
S----------S---------------------------------S----S--------------------S--------
--------------------------------------S----------------S------S-----------------
-------S------------------------S------S--------
>forward_3250
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------------------------------GAGCGCCTTTTCTTCCTCCT------------------------------
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>reverse_5041
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CCCGACGACCCGTAATTTTG------------------------------------------------------------
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