>input_sequence_52505
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-------------------------------------------------------------------------ATGGGGC
ACTCCAACGTCTGGAACTCCCACCCCAAGAACTACGGGCCCGGCTCCCGCGTCTGGTAATACTTCTGCCACCGCCTCGAT
CCCCTCCATCTCCTTAAAATGCCTAGTTCGTTGTTCGTTCCCGCGGCTAGATATCTCCT-GCTAGACCAACTGTTCGCCC
GGATCTGTGTGTCTTACACGATTTAGTTGGCGACATATATCATTCGATCGTGGCGTGCTTCATATGGCGATTAAAACCTT
GTTTGCT----------------CTGTGTTATGTGTTGTCAGGGACTTATTAACCGGTTAAATTCTCACATTTGATGATT
GTTATGCCTTGATAAAGGCTTTCCCATCTTCATATGATGTGTATTTTGTTGATGT------------------------A
GTTGGCGACTTGTATCATCTGATTCTGGCGTGCTTCATATGGCGATTAAAATCTTCTTTGCTTAACTCTGTTAGATGTGG
TCAGGTA------------------GGTTTCGGGTTTCGTTGTTAGTATGTCGCTCAAACCATTCAGAGCTTGCTGTGAT
GTGCAAGTGGCTTCACAAG---------CGACTC-AACCAGGAAAATATTGTTAGAATTGCCTCAAAAGTTTAATTTGTT
ACTTAACAAGCATTTCTTCCGGTGCTGTGCGGTAACAAACTGAAATAGCATGTGGTTGCTGGCTTGTCTGGCGTACCATT
CAATCACTGATGTTAT--TGTGATGAACAAGTATGCTTACGAGTGATTGTACTGACCCCAAGTTTGTTATTTTTGGCAGC
CGGGTCTGTGGAAACTCCCATGGACTGATCAGGAAGTATGGGCTGATGTGTTGCAGGCAGTGTTTCCGCAGCAACGCCAA
GGACATTGGCTTCATCAAGGTATACAACAAGAACATTATTGTTGCACCAGGAACAATCTGAAATTATATTATTATTTTGT
CAGCCATGATTCCCTTACTATTTATATATAGTCCTTCAGTAAGCAGCTTCAAATGTCAGTTATGACTTAATACAT-----
-------------------TAGATTTGTGATTCCTTATTGCCTTCT--AGTGTTTGATG----ATACCTATTCCTAGTCT
ACATCCAAATTAGATAAATGATTGGTTAACAAATTGATGTGCTCC--ATTGTTCTCTATGGTTGGCTCATTTACTTTGCA
GTTTCTGTATTGAGATGTTTTTTGCTAGAATTTTATTACATTGAAGATGTATTTCCAAGTCTGACAATTCACTAGTGGTA
TGCTGTTATTGTGGCCAGGCAATTTCTGAAATGGGTTAATATGATTCAGATAACATAATAGCCAAGCTTTGGTACAGTTG
TCTTGATGTTCTTATGCAGTGTCGTTTCTTCTGCATCTAGCCTT-CTAGTCTAGTATAAAGCAT---GTATATCAAAATT
T-----------TA---------TCGTTTGTGCAGAACTATTGTTATAATTATTTGATTATTATCTTTTGTTGCAGTACC
GTTAA---------------------------------------------------------------------------
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----------------------------------------------------------------------------
>chr5A_1_TraesCS5A01G105800
GCTTCTAGTTAGTAATCTAAATAACTCTCATTCATAAATATGAGACTTGCCATAACACTTTCGAGTCACAACTTAGTACC
AATCAATCGCATTGTCATCAAGTATCAATCCCTTTTCCTTGTCAATTTAAGTTATCTAGTCATATTTCACCATAACTGAA
GTCTGGGAACCAGGCATTCAGCCAAATAGTGCGCCACCCAAGAGG--------------ATAGTACTAGGGAGAAAAAAA
--CCTAGCCCAGCGGGAGCGCATCAAACCGCAGGAAAGAACCCTCACAAGTAACAACCCGCATGTCAGGCCCAGGATCGC
AAGACACCAAACTCGAAGAGGATGATGAGACAAACCTAGAGCAGTGGGAATCAGGCGCGGGCACGCGCGCGAGTTCGTCG
GCGCTGGCGGCGGGCATGGCAGGGAGGTGCGAGCAGCTGGTCCGCGCCTCCACCCACCCCGCCTCGGCGCCATAGAGTTC
CAGGCTCAGATCTCCCTCATCGTCCACCTTGCGGTTGATATCGTCGGTACCTTCCTCTCTCTCCTTCCCCTGCGACGACG
AAACATTCGAGGACGCGTCAGTGGAGTGTAAGAAACAACACAGAGACGGTAGGTAGGG---GCTACGTCGTTCACACGGA
CAGGTCGGGATGAAGACGAGTGCTC------TCCGGCTCCGGCGGCGGAAGACATCCTCGGCGAGTCGGAGTGGAGCGGC
AGACGACGATTTTTTTTCCCGACGAGTCTCACGGGCCACGGCGAGTCGTGCAGATACAGCAC----TATATCTGAGGCCC
AAATGCTCATGATTGGCTGGGCCCAACAAAGAGGCCCTTTAAGCCCGTATACGGGGCTAAGTGTCGGCCTGGGCCCAATC
CAACCCGTGCCCTTGGCTTAGGGTTTACCGCGGCGTCTCCCTAT----ATAAGCCACTCCCGCTCGCACCGCCGCCACCT
ACCCTTTCCTCCTCCCACGCGCATCCTAGCAACCGGCGGCGGCAGGCGGAAGGCGAACAAGAAGGCGGCGACGATGGGGC
ACTCCAACGTCTGGAACTCCCACCCCAAGAACTACGGGCCCGGCTCCCGCGTCTGGTAATACTTCTGCCACCGCCTCGAT
CCCCTCCATCTCCTTAAAATGCCTAGTTCGTTGTTCGTTCCCGCGGCTAGATATCTCCT-GCTAGACCAACTGTTCGCCC
GGATCTGTGTGTCTTACACGATTTAGTTGGCGACATATATCATTCGATCGTGGCGTGCTTCATATGGCGATTAAAACCTT
GTTTGCT----------------CTGTGTTATGTGTTGTCAGGGACTTATTAACCGGTTAAATTCTCACATTTGATGATT
GTTATGCCTTGATAAAGGCTTTCCCATCTTCATATGATGTGTATTTTGTTGATGT------------------------A
GTTGGCGACTTGTATCATCTGATTCTGGCGTGCTTCATATGGCGATTAAAATCTTCTTTGCTTAACTCTGTTAGATGTGG
TCAGGTA------------------GGTTTCGGGTTTCGTTGTTAGTATGTCGCTCAAACCATTCAGAGCTTGCTGTGAT
GTGCAAGTGGCTTCACAAG---------CGACTC-AACCAGGAAAATATTGTTAGAATTGCCTCAAAAGTTTAATTTGTT
ACTTAACAAGCATTTCTTCCGGTGCTGTGCGGTAACAAACTGAAATAGCATGTGGTTGCTGGCTTGTCTGGCGTACCATT
CAATCACTGATGTTAT--TGTGATGAACAAGTATGCTTACGAGTGATTGTACTGACCCCAAGTTTGTTATTTTTGGCAGC
CGGGTCTGTGGAAACTCCCATGGACTGATCAGGAAGTATGGGCTGATGTGTTGCAGGCAGTGTTTCCGCAGCAACGCCAA
GGACATTGGCTTCATCAAGGTATACAACAAGAACATTATTGTTGCACCAGGAACAATCTGAAATTATATTATTATTTTGT
CAGCCATGATTCCCTTACTATTTATATATAGTCCTTCAGTAAGCAGCTTCAAATGTCAGTTATGACTTAATACAT-----
-------------------TAGATTTGTGATTCCTTATTGCCTTCT--AGTGTTTGATG----ATACCTATTCCTAGTCT
ACATCCAAATTAGATAAATGATTGGTTAACAAATTGATGTGCTCC--ATTGTTCTCTATGGTTGGCTCATTTACTTTGCA
GTTTCTGTATTGAGATGTTTTTTGCTAGAATTTTATTACATTGAAGATGTATTTCCAAGTCTGACAATTCACTAGTGGTA
TGCTGTTATTGTGGCCAGGCAATTTCTGAAATGGGTTAATATGATTCAGATAACATAATAGCCAAGCTTTGGTACAGTTG
TCTTGATGTTCTTATGCAGTGTCGTTTCTTCTGCATCTAGCCTT-CTAGTCTAGTATAAAGCAT---GTATATCAAAATT
T-----------TA---------TCGTTTGTGCAGAACTATTGTTATAATTATTTGATTATTATCTTTTGTTGCAGTACC
GTTAATTCACCTGTTCCTGGTACCCTGAAGTGAAGCTGATCAGGGATGAAGGATTGGAGCACTTAATAGAATGCTTAATT
TCAATTCCAGTAATGTTTGCTC------------GTGGTTTTATGTTTTGATGGATACTGAATGATGTAATTGTTGAACA
TGAGTTAATTACCCATGGAGAAGTC-TTTTATCGTTCTGTTGTCTGTGTTTGTCCCCTCTCATTGTCATTGTTAGTTATA
AGTACTTG--TTTTTTTATTAGAACATATTGGGTCAATGGCTGTAACAGACCAGCAACCTAGCAAATAAGCTTATTTCAT
ATCTATCTGTGCTTGTATATAAGCACATGAATGACTGAATCCACGCACCGTACCAGAGAGAATGAAGCGCGTGAGCACAT
GAATGAGCATCTCTACTCCTAATGTCTTAGTTGGTAGGTTGTGTTCTGGGTTTAATTTTCGTCTCACCTACCAT-GTTTT
TTTTGGTACTTCTTTGATACCTGCTCTCACCTCCCGGTTCAAAAAAACCCAACCAAAACCACGTTCATGTAGTTCTCTCG
CAAGCGACAGAA-TCTAACAAAGA-------------AAAA-CCAGCGGAAAAAAACCCTCCACGACCTGCACGCGGGCA
GGAATGAGCGAGGCCTCCGGGTCTAGGGTGCCCACCTCTCTTTCTCTCTCGCCTCCCACCCTCACCCTCCCGATCTGGTC
GCCGCCCACCTTCACCCTCCCGATCTCGTGAGCTGCAGGGGAAATCGGTCTTTAGAATCGCCACCATCGATGCCGCTCAG
TTTCCCTCCGCAACCTGCCACTTGCAACGGACCGAGGTCGTCGATGTGGGCTCGACGCAGCCGCCCGGAGCTACTTCGCC
CTCGATGTTGAGGAGGGCGTGGGCCTGATCGAGCTCCCGGCCGCCTTGCTTCTCTACAGACTATCTCTATCCTCAGTCGT
AGGCTCCTCGTGCTTTCTCCCCTGCGCCGCCACCCAATGGTCTCCGCCAGCGCCGCGTGCCCCCAAGAAAATGGCG
>chr5B_29
CATACATATATAT------------------------------GACTTGCCATAACACTTTCGAGTCACAACTTAGTACC
AGTCAATCGCATTGTCATCAAGTATCAATCCCTTTTCCTTGTCAATTTAAGTTATCTAGCCATATTTCACCATAACTGAA
GTATGGGAGCTGGGGATTCGGCCAAATAGTGCCACCGCGAACTAGAACTC------------------------------
----------AAGGGGAGAGCATCAAACAGCAGATAAGAACCCTAACAAT-------CCGCATGTCAGGCCCAGGGTCGC
GAGACACCAAACTCGAAGAGGATGGTGAGACAAACCTAGAGCACTGGGAATCAGACGCGGGCACGCGCGCGAGTTCGTCG
GCGCTGGCGGCGGGCATTGCAGGGAGGTGTGGGCAGCTGGTCCGCGCCTCCACCCACCCCGCCTCGGCGCCATAGAGTTC
CAGGCTCAGATCTCCCTCATCGTCCACCTTGCGGTTGCTATCGTCGGCACCTTCCTCTCTCTGCTTCCCCTGCGACGACG
AGACATTCGAGGACACGTCAGTGGA--GTAAGAAACAACACAGTGACGGTAGGTAGGG---G---CGTCGTTCACACGGA
CAGGTCGGGATGAAGACGAGTGCTCTCCGGCTCCGGCTCCGGCGGCGGAAGACATCCTCGGCGAGGCGGAGTGGAGCAGG
AGAAGACGATTTTTTTTCCCGACGAGTCTCACGGGCCACGGCGAGTCGTGCAGATGATACAGCACATATATCTGAGGCCC
AAATGCTCATGATTGGCTGGGCCTAACAAAGAGGCCCTTTAAGCCCGTATACGGGGCTAAGTGTCGGCCTGGGCCCAATC
CAACCCGTGCCCTTGGCTTAGGGTTTACCG--GCGTCTCCCTATCTATATAAGCCTCTCCCGCTCGCACCGCCGCCACCT
ACCCTTTCTTCCTCCCACGCGCATCCTAGCAACCGGCGGCGGCAGGCGGAAGGCGAACAAGAAGGCGGCAACGATGGGGC
ACTCCAACGTCTGGAACTCCCACCCCAAGAACTACGGGCCCGGCTCCCGCGTCTGGTAATACTTCTGCCACCGCCTCGAT
CCCCTCCATCTCCTTAAAATGCCTAGTTCGTT-------CCCGCGGCTAGATATCTCCTAGCTAGACCAACCGTTCGGCC
GGATCTGTGT--CTTAGATGATGTAGTTGGCGACATATATCATTCGATCGTGGCGGGCTTAATATGGCGATTAAAACCTT
GTTTGCTGACATCTCATATGTAAGTGTGTTAGGTGTGGTCAGGTACTGATTAATCGGTCAAATTCTCACATTGATTGATT
G-TATGCCTTGATGAAGTCATTATCATCTTCATATGATGTGTATTTTGTTGCGGTTGTCTGTGCTATTCTCGGCGATGCA
GTTGGCTACATGTATCATCCGATTCTGGCGTCCTTCATATGGCGATTAAAATCTTTTTTGATTAACTCTGTTAGATGTGT
------------------------------------------------------TCAAACCATTAAGAGCTTGCTGTGAT
GTGCAAGTAGCTTCACAAACAAGTAATGCGACCAGAACTAGGAAAGTATTGCTAGAATTGCCTAGTTAATTTCTTTG---
ACTTAACAAGCATTTCTTCAAACGCTGTGCGGTAACAAACTGAAATAGTGTGTGGTTGCTGACTTGTCTGGCGTACCATT
CGATCACTGATGTTATATTGTGATGAACCAGTATGCTTATGAGTGATTGTACTGACCCCAAGTTTGTTATTTTTGGCAGC
CGGGTCTGTGGAAACTCCCATGGACTGATCAGGAAGTATGGGCTGATGTGCTGCAGGCAGTGTTTCCGCAGCAACGCCAA
GGACATTGGCTTCATCAAGGTATACAACAACAACATTATTGTTACACCAGAAACAATCTGAAATGTTCTTATTATTTTGT
AAGTCATGATTCCCTTCCTATTTATATGTAGTCTGCAAGTAAACGGCTTAAAATGTCTGTTATGACTTATAATTTTTTTG
GTATTGCATTAGCTCTAGATAGATGTGTGAATCCTTAATGCCTTCTCTAGTGTTTGATGATCAATACCTATTCCTAGACT
ACATACAAATGAGATAACTGACTGGTTAACAAATTAATGTGCTCTGTATAGTTCTCTATGGTTGGCTCATTTACTTCGTA
GTTTCTGTATTCAGATGTGTTTTGCTGGCATTTTATTACATTGAGGAACAAGTTC-------------------------
------TATTGTGGCCTGGTGATTTCTGAAATGTT----TATGGTTCAGATAACATAATAGCCAAGCTTTGATATAGTTG
TCTTGATGTTCTTATGCAGCATCCTTTCTTCAGCATCTAGCCTT-CTAGTCTAGAATAAAACATTTAGTATATTAGAATT
TGTAGTTAGACATACCATTTCCTTCGTTTGTGCAAAACTAGCGTTGTAATTATTGGATTATGTTCTTTTGTTGCAGTACC
GTTAATTCACCTGGTCCTGCTACCCTGAAGTGAAGCTAATCAGGGATGAAGTAATGGAACTCTTAATGGAAGGCTTAATT
TCAATTCCAGTAATGATTGCTCAGTACTCTGAGAGTGGCTTTATATTTTGATGGATACTGAATGATGTAATTGTTGAACA
TGAGTTAATTACCCATGGGGTAGCCTTTT-ATCATTCTGTTGCCTGTGTTTGTCTCCTCTCATTGTCATTGGTAGTTTTA
AGTACTTG--TTTTTT-ATTAGAACGTATTGGCTCAATTTCTGTAGAAGACCAGCAACCCAGCGAATATGCTTACTTTAT
TTCTATCAGTTGTTGCATATA-----------------------------------------------------------
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----------------------------------------------------------------------------
>chr5D_47
----------------------------------------------TTGCCATAACACTTTCGAGTGACAACTTAGTACC
AATCAATCGCATTGTCATCAAGTATCAATCCCTTTTCCTTGTCAATTTAAGTTATCTAGTCATATTTCACCATAACTGAA
GTCTGGGAACTAGGGATTCAGCCAAACAGTGCCACCTTGAACTAGAACTCAAGAGGCCAATAGTAATAGGGAGAAAAAAA
AACCTAGCCCAAGGGGAGAGCATCAAGCAGCAGATAAGAACCCTAACAAT-------CCGCATGTCAGGCCCAGGATCGC
GAGACACCAAACTCGAAAAGGATGGTGAGACAAACCTAGAGCACTGGGAATCAGGCGCGGGAACGCGCGCGAGTTCGTCG
GCGCTGGCGGCGGGCATGGCAGGGAGGTGCGGGCAGCTGGTCCGCGCCTCAACCCACCCCGCCTCGGCTCCATAGAGTTC
CAGGCTCAGATCTCCCTCATCGTCCACCTTGCGGTTGCTATCGTCGGCACCTTCCTCTCTCTCCTTCCCCTGCGACGACG
AAACATTCGAGGACAAGTCAGTGGAGTGTAAGAAACAACACAGAGACGGTAGGTAGGGGCTG---CGTCGTTCACACGGA
CAGGTCGGGATGAAGACGAGTGCT------CTCCGGCTCCGGCGGTGGAAGACATCCTCGGCGAGTCGGAGTGGAGGAGG
AGACGACGATTTTTTTTCCCGACGAGTCTCACGGGCCACGGCGAGTCGTGCAGC---TACAGCACATATATCTGAGGCCC
AAATGCTCATGATTGGCTGGGCCCAACAAAAAGGCCCTTTAAGCCCGTATACGGGGCTAAGTGTCGGCCTGGGCCCAATC
CAACCCGTGCCCTTGGCTTAGGGTTTACCG--GCGTCTCCCTAT----ATAAGCCTCTCCCGCTCGCACCGCCGCCAACT
ACCCTTTCATTCTCCCACGCGCATCCTAGCAACCGGCGGCGGCAGGCGGAAGGCGAACAAGAA---------GATGGGGC
ACTCCAACGTCTGGAACTCCCACCCCAAGAACTACGGGCCCGGCTCCCGCGTCTGGTAATACTCCTGCCACCGCCTCGAT
CCCCTCCATCTCCTTAAAATGCCTAGTTCGTT-------CCCGCGGCTAGATATCTCTT-GCTAGACCAACTGTTCGGCT
GGATCTGTCT--CTTGGACGATGTAGTTGGCTACATATATTATTCGATCGTGGCGTGCTTCATATGGCGGTTAAAACCTT
ACTTGCTCACATGTCATATTTAACTGTGTTAGGTGTGGTCAGGTGGCA--------------------------------
--------TTGATAAAGGCTTTCCCATCTTCATATGATGTGTATTTTGTTGATGT------------------------C
GTTGGCAACTTGTATCATCTGATTCTGGCGTGCTTCATATGGCGATTAAACTCTTCTTTGCTTAACTTAGTTAGATGTCG
TTAGGTACTGATTAATTGGTCGAAAGGTTACGGGTTTTGGTGTTAGTATGTTGCTCAAACCATTCAGAGCTTGCTGTGAT
GTGCAAGTGGCTTCACAAT---------CGACTAGAACTAGGAAAATATTGCTAGAATTGCCTCAAAGTTTAAT------
----------------TTCCGGTGTTGTGCGGTAACAAACTGAAATAGCGTGTGG-TGCTGGCTTGTCTGGCGTACCATT
CGATCACTGATGTTAT--TGTGATTAACAAGTATGCTTACGAGTGATTGTACTGACCCCAAGTTTGTTATTTTTGGTAGC
CGGGTCTGTGGGAACTCCCATGGACTGATCAGGAAGTATGGGCTGATGTGCTGCAGGCAGTGTTTCCGCAGCAACGCCAA
GGACATTGGCTTCATCAAGGTATACAACAAGAACATTATTGTTGCACCAGAAACAATCTGAAATTATATTATTATTTTGT
CAGTCATGATTCCCTTACTATATATATGTAGTCCTTAAGTAAACAGCTTCAAATGTCAGATATGACTTAATACAT-----
-------------------TAGATTTGTGATTCCTTATTGCCTTCT--AGTGTTTGATG----ATACCTATTCCTAGACT
ACATCCAAATGAGATAAATGATTTGTTAACAAATTGATGTGCTCC--ATTGTTCTCTATGGTTGACTCATTTACTTTGCA
GCTTCTGTATTGAGATGTGCTTTGCTGGCATTTCATTACATTAAAGATGTAGTTATGAGTCTGACAATTCACTAGTGGTA
TGCTGTTATTGTGGCCTGGCAATTTCTGAAATTGGTTAATATGATTCAGATAACATAATAGCCAAGCTTTGATACAGTTG
TCTTGATGTTCTTATGCAGCGTTGTTTCTT-TGCATCTAGCCTTCCTATTCTAGAATAAAACAT---GTATATCAAAATT
TGTAGTTAGACATA---------TCGTTTGTGCAGAACTATTGTTCTAATTATTGGATTATTTTCTTTTGTTGCAGTACC
GTTAATTCACCTGGTCCTGCTACCCTGAAGTGATGCTGATCAGGGTTGAAGGAATGGAGCACTTAATAGAAGGCTTAATT
ACAATTCCAGTAATGTTTGCTCTGTACTCCGAGAGTGGCTTTATGTTTTGATGGATACTGAATGATGTAATTGTTGAACA
TGAGTTAATTACCCATGGAGAAGTC-TTT-ATCATTCTGTTGACTGTGTTTGTCCCCTCTCATTGCCATTGGTAGTTATA
AGTAACTTGTTTTTTT-ATTAGAACGTATTGGGTCAATGGCTGTAACAGACCAGCAACCCAGCAAATATGCTTATTTCAT
TTCTATCTGTTGTTGCATAAAG----------------------------------------------------------
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>chr3A_2794
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--------ATCTCTACTCCTAATGTCTCAGTTGGTAGGTCGCGTTCCGGGTTTTATTTTCGTCCCACCTCACCCGGTCTT
TTTTGGTACTTCATTGGTACCTGCTCCCACCTCCCAGTTCAAAAAAACCCAACCAAAACCACGTTCACGTAGTTCTCTCG
CAAGCGACAGAA-TCTAACGAAAATAAACCTTTGAAGAAAA-CCAGCGAAAAAAGACCCTCCACGACCCGCACGCAGGCA
GGAACGAGCGAGGCCTCCAGGTCCAGGGTGCCCACCTCTCTTTCTCTCTCGCCTCCCACCCTCACCCTCCCGATCTGGTC
ACCGCCCACCCTCACCCTCCCGATCTCGTGAGTTGCAGGGGAAATCAGTCTCCAGAATCGCCACCACCGATGCCGCTCGG
TTCCCCTCCGCAACCTGCCACTTGCGACGGACCGAGGTCGCTGATGTGGGCTCGACGCAGCCTCCCGGAGCTACTTCGCC
CTCGACGTCGAGGAGGGCGTGGGCCTGATCGAGCTCCCGGCCGCCCTGCTCCTCTACAGACTATCTCTATCCTTAGTCGT
AGGCTCCTCATGCTTTATCCCCTGCGCCGCCACCCAATGGTCTCCGCCAGCGCCGTGTGCCCCCAAGAAAATGGCG
>chr6A_2795
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---------TCTCTACTCCTAATGTCTCAGTTGATAGTCTGCGTT-CGGGTTTTATTTTCGTCCCACCTACATGA----T
TTTTGGTACTTCTTTGGTACCTGCTCCCACCTCCCAGTTCAAAAAAACCCAACCAAAACCACGTTCACGTAGTTCTCCCG
CAAGCGACAGAACTCTAACGAAAATAAACCTTCGAAGAAAAACCAGCGAAAAAA-ACCCTCCACGACCCGCACGTAGGCA
GGAACGAGCGAGGCCTCCAGGTCCAGGGTGCCCACCTCTCTTTCTCTCTCGCCT--------------------------
----CCCACCCTCACCCTCCCGATCTCGTGAGCTGCAGGGGAAATCGGTCTCCAGAATCGCCACCACTAATGCCGCTCGG
TTCCCCTCCGCAACCTGCCACTTGCAACGGACCGAGGTCACCGATGTGGGCTCGACGCAGCCGCCCGGAGCTACTTCGCC
CTCGACGTCGAGGAGGGCGTGGGCCTGATCGAGCTCCCGGCTGCCCTGCTCCTCTACAGACTATCTCTA-CCTCAGTCGT
AGGCTCCTCGTGCTTTCTCCCCTGCGCCGCCACCCAATGGTCTCCGCCAGCGCCGCGTGCCCCCAAGAAAATGGCG
>SNPs
SS-S-SSS-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------
--------------------------------------------------------------------------------
----------S---S-----------------SS-SS-S--SSS---------------------S--------------
-----------SS-----S---------S----SS---------S----SSSSSSSS-----------------------
S-----------------------S------------------S------------------------------------
-------------------------------S------------------------------------------------
-------------------------------------S---------S--------------------------------
--------------S-----------------------------------------------SSS---------------
-----------------------------------------------------------------------------S-S
-------------------------------------------------------SSSS--S------------------
--------------------------------------------------------------------------------
------------------------------SS-----------------------S------------------------
--------S------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------SSSSSSS--------------------------------------S--
----------SS----S-----S---------------------------------------------------------
-------------------------------S----S------S---S-----S----S-------------SSS-----
-S------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
-S---------------------------S-------S-S-----------S----------------------------
------------------S--------------S----S------------S----------------S----S--SSSS
-------------------------------------------------S------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------S-----------------------------
---S-----------------------S--------S-----S-------------------------------------
-----------------------------------------------------------------------------S--
----------S---------------------------------------------------------------------
------------------S-------S-S----------------------S---SS-----------------------
----------------S------------------------------------------------------S--------
-------------------S----------------------------------S-----S-------------------
---------------------------------------------S--------S-------S-----------------
-------------S-----S---------------------------------S-----------------S--------
--------------------------------------S-----------------------------------------
-----------------------------S---S--------S----------------------------S--------
----------------S--------S---------------------------------S--------S-----------
S---------SS---S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS-------------------S-------------S----S------S---------S--------SS---S--
----------------S---------S--------S-------------------------------S------------
-------------------S--S-------------------------S-----S-------------S------S----
----S-------------S----S--------------------------------------------------------
S---------S----------------------------------------SS-------------S-----------S-
--S-------------------------------------S---------------------------------------
-----S--S------------------------------------S----S-----------------------------
----------------------------------------------------------------------------
>forward_203
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-----------------------AAATAGTGCGCCACCCAAGA-------------------------------------
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>reverse_1730
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-------------------------------------------------ATGTGGTTGCTGGCTTGTCT-----------
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>forward_528
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----------------------------TTGCGGTTGATATCGTCGGT--------------------------------
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>reverse_1891
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--------------------------------------------------TTGCAGGCAGTGTTTCCGC-----------
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>forward_1639
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-------------------GCTTCACAAGCGACTCAACC-----------------------------------------
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>reverse_2948
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-------------------------------------------------------------------CGCGTGAGCACAT
GAATGAG-------------------------------------------------------------------------
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