>input_sequence_52502
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------------------------------------------------------------------------------AT
GGTGTCGTCCCCGTCCCCTTCCCCTCCTACCTTCACTTCTGCGGTGAGCTCGCGTTGCTTCTACCTT-TTCTCCTTGCGA
TGTG---TGTATGTTGCTTGTGA-----------------------------------GCTTGTGAGCTGCAATGCTAAG
CTGTAATCGTCAGGTGTCCGAGACCAAGCGGCATGGTGGTGTCCCGACGACGGCCTCGGAGAAGCTGGACCAGAAGTACG
CCCACTCCGCGACGCCGCTGCACGGCCACGGCCACGGCGGCGGCGGCGGTGCCAAGAAGACGCCGCGGCGGGGGAGGAGC
GAGGGCGGCGCCGCCGACTCGGCCGCGTATGTCGCGGCGGTGTCCTGCTCCGACTGCCGCTTCAAGCAGCGCGCCCTGGC
GCCGGCGTCGCCGGGAGCCGTCATCCGCTCGCTGTTCGTGTCCCTCACCCGACGCTCCACTCCGCGCTCCTCGCCGTCTC
CCACGTCGGCCTCGGAGGGTGATGGGGGTGAGGGCGAGCAGTGGCGCCTGGCCGCGGCCGACCTCTCGCGGCGGCTCGCC
GCGGCCACGCGGACGCGGGACGACGCGGTGGAGGAGACCTCCCGACTGAAGCAGTCCCTCGCGGAGCTGGAGCTCAAGCT
GGCGCGCCTCGAGGCCCGCGTGCTCCCCACGCCGGCCGCCGCCGTCTTCCCCGTCGAGTCCTTCCTCCGCGCCGTCTCCA
CGGCGCGCGCCACCGTGCGGAACCTCACGCGCGCGCTCTCCACGCACCTGCGCAGCCCCGCGAGCCCCGGCCCCAACCTC
GAGAGCTTCCTCAACCGCGCCTTCCACGCGGACTTCGAGCTGGACACCGAGGGCGACGTCCACACGGCGGACCCGGCGGG
CCGGTGCGAGGCCAACCTCGCGGCGTACCACGCCGTGGCGGCGCTGACCTGGGAGGAGGTGCTCGTCCACGGGACGAAGC
ACTACAGCGACGGGCTGAGCCGGTTCTGCGACGCCAAGATGAGCGAGGTGGTGTCCTCCCTCGGGTGGGCGCGCGCGCGG
CCCTGGCCGGAGCCGCTGCTGCAGGCCTTCTTCCTGGCGGCCAAGGGCGTGTGGGGGGTGCGCCTGCTGGCGCGGTCCGT
GCACCCGCCGCTGCCCGTCGTGCGCGTGGACCGCGGCGCGCGCTTCGACTCGCGGTTCATGGAGGACGCCGCGGCCTCGC
GCGCCGGGCGGCTGGAGCCGGCCAGCGTGAAGATGATGGTGGCGCCGGGGTTCCACGTGTACGTCGCCGGCGCCGGCGTG
GTCAAGTGCAAGGTCGTGTGCTTCTACAACAACGGCCGCGCCGGCGGCCACATGGGTGGCGGGAGCAGCGGCAACGGCGG
CGAGGGGTTGGGCGGTAGCTGTAGCGATATGAATGGTGGTGGTACGGATGCGGTGAAGAGCTGTCAGAGTAGCAGAGTAT
AG------------------------------------------------------------------------------
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---------------------------------------------------------------------
>chr4A_1_TraesCS4A01G080000
CGATAGCAACTTATGAGCAGTGATACTAA-CGACGGCAGACCTGAAGCCTGA------------GACGAGCATGCGTTCT
TTGACTTTTTAATCTCAGACGGAGCACCTCGCCTGGAGCGCTGGAGGAATTCACGCATGTCACCGGCAGCTGCAGTGACG
CAGCGAGTGACAAGACGCGGGAAAAGGTTGATCGGAGCCTCGTAATATCTCTCTCT----AGTACTGTATGTCATCGGAC
TGGGAGGACGGAATCCACCGCATTCAGTTCCACACACGGGAGACGGGACTCGGGGTCGCGCCACGATCCGCAATTCATTG
ACGGCATG-TTGAAGCGTGCGGGGCGGTCCAGACGGGTCGTGCCGATGTCCAGATTTATGGTGTCCTCCCTCCCCAACCT
GCCGTGCCGACCGCTCTTAATGTGCCGCTCCAAAAACTCATGATACGTAC---GAGCATTTGCGCCCCAGTGATTA----
--------------------------------------------------------------------------------
---------------TGAGGACGGACGAGCTAGAGCTAGAGCTCGCGCGGCTGCGGGAGAAGCTGACAGACGTAGCATGG
CGACGCAAAACCTTTTACTACTTTTCTGCCTCCAGAACCCAGGGAGCCGAGGGAGGGATGGCTGGCGCGCGTCTCATCAC
AATGTCACAAATGGAAAATCTGAGCTTCAAAAAGGAAAACAAATGGAGAATCTGAGAGCAGGAGGGGATAAATCGAGAGA
GAG-----------GGGGGAGATGGTCCAGACGGAGGCGGGCGGCATTAAACGCACCAACGACCCGAACTGACCGGCATT
CATGCCCCGCGTCGTCCTGCCTGCCTGCCT---------------CA------GCTCCCCTCCCCGTGAAGTAGACTGCG
AAAAAAGACGTCGTCGCACGTACACGTACACGTACAGTACAGACGCAGGCGAGGCAACCAACACCGCACCGCAGCC----
--------------------------GCCCGCACCACCGCGAGGCAAAAGCAGCCACCATCCCTGC------------GC
TAGCGTCCGACCGCCGCAAGTCCCAGCCCAACAAAAGG----TCGCTGTTGTTCGTAGACGGAGCTCGATCCGCAGCCAT
GGTGTCGTCCCCGTCCCCTTCCCCTCCTACCTTCACTTCTGCGGTGAGCTCGCGTTGCTTCTACCTT-TTCTCCTTGCGA
TGTG---TGTATGTTGCTTGTGA-----------------------------------GCTTGTGAGCTGCAATGCTAAG
CTGTAATCGTCAGGTGTCCGAGACCAAGCGGCATGGTGGTGTCCCGACGACGGCCTCGGAGAAGCTGGACCAGAAGTACG
CCCACTCCGCGACGCCGCTGCACGGCCACGGCCACGGCGGCGGCGGCGGTGCCAAGAAGACGCCGCGGCGGGGGAGGAGC
GAGGGCGGCGCCGCCGACTCGGCCGCGTATGTCGCGGCGGTGTCCTGCTCCGACTGCCGCTTCAAGCAGCGCGCCCTGGC
GCCGGCGTCGCCGGGAGCCGTCATCCGCTCGCTGTTCGTGTCCCTCACCCGACGCTCCACTCCGCGCTCCTCGCCGTCTC
CCACGTCGGCCTCGGAGGGTGATGGGGGTGAGGGCGAGCAGTGGCGCCTGGCCGCGGCCGACCTCTCGCGGCGGCTCGCC
GCGGCCACGCGGACGCGGGACGACGCGGTGGAGGAGACCTCCCGACTGAAGCAGTCCCTCGCGGAGCTGGAGCTCAAGCT
GGCGCGCCTCGAGGCCCGCGTGCTCCCCACGCCGGCCGCCGCCGTCTTCCCCGTCGAGTCCTTCCTCCGCGCCGTCTCCA
CGGCGCGCGCCACCGTGCGGAACCTCACGCGCGCGCTCTCCACGCACCTGCGCAGCCCCGCGAGCCCCGGCCCCAACCTC
GAGAGCTTCCTCAACCGCGCCTTCCACGCGGACTTCGAGCTGGACACCGAGGGCGACGTCCACACGGCGGACCCGGCGGG
CCGGTGCGAGGCCAACCTCGCGGCGTACCACGCCGTGGCGGCGCTGACCTGGGAGGAGGTGCTCGTCCACGGGACGAAGC
ACTACAGCGACGGGCTGAGCCGGTTCTGCGACGCCAAGATGAGCGAGGTGGTGTCCTCCCTCGGGTGGGCGCGCGCGCGG
CCCTGGCCGGAGCCGCTGCTGCAGGCCTTCTTCCTGGCGGCCAAGGGCGTGTGGGGGGTGCGCCTGCTGGCGCGGTCCGT
GCACCCGCCGCTGCCCGTCGTGCGCGTGGACCGCGGCGCGCGCTTCGACTCGCGGTTCATGGAGGACGCCGCGGCCTCGC
GCGCCGGGCGGCTGGAGCCGGCCAGCGTGAAGATGATGGTGGCGCCGGGGTTCCACGTGTACGTCGCCGGCGCCGGCGTG
GTCAAGTGCAAGGTCGTGTGCTTCTACAACAACGGCCGCGCCGGCGGCCACATGGGTGGCGGGAGCAGCGGCAACGGCGG
CGAGGGGTTGGGCGGTAGCTGTAGCGATATGAATGGTGGTGGTACGGATGCGGTGAAGAGCTGTCAGAGTAGCAGAGTAT
AGTCAAAAAA-AGACACGAGGATGGTTATTTGTGTGGTAAAAACAGGACTTGCATTCAATTGATGTGTGAATATGGGGTG
TTAATTCCGCT----------------------CTCGAACAGCATTTCTGCGCTCAGCGTGAGATGAAGTGATCATCTTT
GGTT----GCGGCACACTTCACCGTCATGGCGGCACGGCAGTCGCGCATGCCCGAGACAAATTCGGAAAATTGGTGATTG
GACCTTCCAACGATCTTGACTGGCCATGCGGGTGCTCCTTTCAGAGGAAACGATGCCATGTCACCGGATCCTCGGAGGTG
AGGCCAACTCCAATACAAGGACGCATCGTCCGTTTGGATCCGCGCAAACAAAATACACGGGCCAACGTCAACACAAACGG
ACGGATGTTCGTACTCATTTTTCAACATAAATTGGTTGAGTTTGCGTCTGCGCAGACACCTTCGCCTTGCAAGAGTAATG
CTAGAGATACATATATTTACATAGGATTTACAAGGAGATGAATTTTGATTGGAAATTAAGAAGGAGATATATTTACATAA
GACACCCCTGAGTTTCTGGGTGGACCCTTTCTCCCTCTTAATCTCCAATCAAAATTCATCTGCTTGTAAATCATATGTAA
ATCTACGTATCTCTAGCATTACTCTTCCCTTGTCCTTCCTTGAACCGCCTATCTGTGGCACAACAACGTCATTCCCTCCA
CTCTCTACCAAAACACCCTCGGCCTCCCGCCATGGCCGACGCGCCCAATCCCGCAACTGCTCCCTTCCGGCCCCGTCGTG
TTTGCCCATGTCGTGGGCCCGAAGAAGCCAAAGGTGAGCACCCCGGAGGATACGGTCATCCAGACGGCGAAGAGGGTTGG
CCGGAGGAGGAAGGACAAGGTGGAAAAAGAAGCCGCCGCCACAGATGCTCAGGCCCCACCACTGCGGAGAGCGAGGCCCT
CGTCACCAAGGCCGTGTAGTAGGCCATCCTCTTGCTGGGGTACCGCGAGCCGTCCCTTCTCGCCGCCGC
>chr4B_1
CGATAGCAACTTATGAGCAGTGATCATAACCGACGGCAGACCTGAAGCCTGAGCACTGAGGCCTGACGAGCATGCGTTCT
TTGACTTTT-AATCTCAGACGGAGCACGTCGCCTGTAGCGCTCGAGGCATTCGCACAAGTCACTGGCAGCTGCAGTGACG
CAGCGAGTGACAAGAGGCGGGAAAAGGTTGATCGGAGCCTCGTAATATCTCTCTCTCTCTAGTACTGCATGTCATCAGAC
TCGGAGGACGGAATCCACGGCATTCAGTTCCACGCACGGGA-------CTCGGGGTCGCGCCACGGTTCTCAATTCATTG
ACAGCATGTTTGAAGCGTGCGGGGCGGTCCAGATGGGTCGGGTCGACGTCCGGATTTATGGTGTCCTCCCTGCCCAACCT
GCCGTGCCGACCGCTCTTAATGTGCCGCTCCA-AAACTCATGATACGTAC---GAGTATTTGCGCCCCGGTGATTACGAT
ACGAGTACTCGTATCTTTCTCTCTGCGTTGTACGGTAAGAAAATGTTATGAGGAAATCCAACTCTCATCGATGCCTGTTG
GCTGTTGGCCGGAGGTA---------------------------GCGCGGCTGCGGGAGAAGCTGACAGACGTAGCATGG
CCACGCAAAACCTTTTACT---TTTCTGCCTCCAGAATCCAGGTAGCCGAGGGA--------TGGCTGGCGTCTCATCGC
AAAGTCACAAACGGAA--------------------------------AATCTGAGAGCAGGAGGAGATAAATCGAGAGA
GGGAGCAAGGA---GGGAGAGATGGTCCAGACGGAGCCGGGGGGCATTAAACGCACCAACGACCCGAACTGACCGGCATT
CATGCCCCGCGTCGTCCTGCCTGCCTGCCTGCCTGCCTCTAGGCTCA------GCTCCCCTCCCCGTGAAGTAGACTGCA
AAAAAAGACGTCGTCGCAC------GTACTCGTACAGTACAGACGCAGGCGAGGCAACCAACACCGCACGGTCCGCACCA
CAGCGCTCAGCACTATCGCCTCGCCAGCCGCCACCACCGCAACGCAAAAGCCA-----------GC------------GC
TAGCGTCCGACCACCGCAAGTCCCAACCCAACAAAAGG----TCGTTGTTGTTCGTAGAGGGAGCTCGATCCGCAGCCAT
GGTGTCGTCCCCGTCCCCTTCCCCTCCTACCTTCACATCCGCGGTGAGCTCGCGTCCCTTCTCCTCCT-----CTTGCGA
TGTGTGTTATGTCTCTGTTCTTTGAGTTGGGTCGTGGGTGCTCTTTGCTTGATTGCTTGTCTGTGAGCTGCAATGCTAAG
CTGTAATCATCAGGTGTCCGAGACCAAGCGGCATGCTGGTGCCCCGACGACGGCCTCCGAGAAGCTGGACCAGAAGTACG
CCCACTCCGCGACGCCGCTCCACGGCCACGGCGGC---------------GCCAAGAAGACGCCGCGGCGGGGGAGGAGC
GAAGGCGGCGCCGCCGACTCGGCTGCGTATGTCGCGGCGGTGTCGTGCTCCGACTGCCGCTTCAAACAGCGGGCACTGGC
GCCGGCGTCGCCGGGAGCCGTCATCCGCTCGCTGTTCGTCTCCCTCACCCGACGGTCCACCCCGCGCTCCTCGCCGTCTC
CCACGTCGGCCTCGGAAGGCGACGGGGGTGAGGGAGAACAGTGGCGCCTGGCCGCGGCCGACCTCTCGCGGCGGCTCGCC
GCCGCCACGCGGACGCGGGACGACGCGGTGGAGGAGACCTCGCGGCTGAAGCAGTCCCTCGCGGAGCTGGAGCTCAAGCT
CGCGCGCCTCGAGGCCCGCGTGCTCCCCACGCCGGCCGCCGCCGTCTTCCCCGTCGAGTCCTTCCTCCGCGCCGTCTCCA
CTGCGCGCGCCACCGTGCGGAACCTCACGCGCGCGCTCTCCACCCACCTGCGCAGCCCCGCGAGCCCCGGCCCCAACCTC
GAGAGCTTCCTGAACCGCGCCTTCCACGCGGACTTCGAGCTCGACACCGAGGGCGACGTCCACACCGCGGACCCGGCGGG
CCGGTGCGAGGCCAACCTCGCGGCGTACCACGCCGTGGCGGCGCTGACCTGGGAGGAGGTGCTCATCCACGGGACGAAGC
ACTACAGCGACGGGCTGAGCCGGTTCTGCGACGCCAAGATGAGCGAGGTGGTGTCCTCCCTCGGGTGGGCGCGCGCGCGC
CCCTGGCCGGAGCCGCTGCTGCAGGCCTTCTTCCTGGCGGCCAAGGGCGTGTGGGGGGTGCGCCTCCTGGCGCGGTCCGT
GCACCCGCCGCTGCCCGTCGTGCGCGTGGACCGCGGCGCGCGCTTCGACTCGCGGTTCATGGAGGACGCCGCGGCCTCGC
GCGCCGGGCGGCTGGAGCCGGCCAGCGTGAAGATGATGGTGGCGCCGGGGTTCCACGTGTACGTCGCCGGCGCCGGCGTG
GTGAAGTGCAAGGTCGTGTGCTTCTACAACAACAGCCGCACCGGCAGCCACATAATTGGCGGGAGCAGCGCCAACGGCGG
CGAGGGGTTGGGAGGTAGCTGTAGCGATATGAATGGGGGTGGTACGGACTCGGTGAAGAGCTGTCAGAGTAGCAGAGTAT
AGTCAAAAAAAAGACACGAGGATTGTTATTTGCGTGGTAAAAACAGGACTTGCATTCAATTGATGTGTGAATATGGGGTG
TCAATTCCGCTCTTGTGAGTCACATTTCTTCGTCTTGAACAGCATTTCTGCGCTCAGCGTGAAGTGAAGTGATCATCTTT
GGTC----GCTGCACACTTCACCGTCATGGCGGC-----------------CCGAGACAAAAACGGAAAAATGGTGATTG
GACCTTCCAACGATCTTGACTGGCCATGCGGGTGCTCCTTTCAGCGGAAACGACGCCATGTCATCCGATCCTTGGAGGCG
AG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>chr4D_41
CTGAGGCCTGA------------------------------------------------------ACGAGCATGCGTTCT
TTGACTTTT-AATCTCAGACGGAGCACGTCGCCTGGAGCGCTGGAGGCATTCACGCAAGTCACTGGCAGCTGCAGTGACG
CAGCGAGTGACAAGAGGCGGGAAAAGGTTGATCGGAGCCTCGTAATATCTCTCTCTACTGTAT-CTGTATGTCATCAGAC
TCGGAGGACGGAATCCACCGCATTCAGTTCCACACACGGGA-------CCCGGGGTCGCGCCACGATTCGCAATTCATCG
ACGGCATG-TTGAAGCGTGCGGGGCGGTCCAGATGGGTCGGGTCGATGTCCGGATTTATGGTGTCCTCCCTGCCCAACCT
GCCGTGCCGACCGCTCTTAATGTGCCGCTCCA-AAACTCATGATACGTACTACGAGTATTTGCGCAAAAAC---------
------ACTTGTATCTTCCTCTTTCCGGTGTACTGTACTTACGTAAGAAAACTCTCCTCCGTTTAACCA---------TG
CCTGTTGGCCGGAGGTGAGGACGGACGAGCTAGAACTAGAGCTTGCGCGGCTGCGGGAGAAGCTGGCAG-------ATGG
CGACGCAAAACCTTTTACT---TTTCTGCCTCCAGAACCCAGGGAGCCGAGGGATGGCTGGAGT----GCGTCTCATCAC
AAAGTCACAAATGGAA--------------------------------AATCTGAG---AGGAGGAGATAAATCGAGAGA
GGGAGCAAGCGAGAGGGGGAGATGGTCCAGACGGAGCCGGGGGCCATTAAACGCACCAACGACCCGAACTGACCGGCATT
CATGTCCCGCGTCGTCCTGCCTGCCTGCCTGCCTCTAGGCTGAGCGGGGCGGGGCTCCCCTCCCCGTGAAGTAGACTGCG
AAAAAAGACGTCGTCGCACGTA---GTACACGTACAGTACAGACGCAGGCGAGGCAACCAACACC---------GCACCA
CAGCGCGCAGCACTATCGCCCCGCCAGCCGCCACCACCGCGAGGCAAAAGCCA-----------GCCACCATCCCTGCGC
TAGCGTCCGACCACCGCGAGTCCCAACCGAACAAAAGGTCGTTCGTTGCTGTTCGTAGAGGGAGCTCGATCCGCAGCCAT
GGTGTCGTCCCCGTCCCCTTCCCCTCCTACCTTCACTTCTGCGGTGAGCTCGCGTCCCTTCTACCTTCTTCTCCTTACGA
TGTG---TATGTCTCTGTTCTTTGAGTTGGGCCGTGGGCGCTCCTTGCT---TTGCTTGCTTGTGAGCTGCAATGCTAAG
CTGTAATCGTCAGGTGTCCGAGACCAAGCGGCATGCTGGTGTCCCGACGACGGCCTCGGAGAAGCTGGACCAGAAGTACG
CCCACTCCGCGACGCCGCTCCACGGCCACGGCCACG------GCGGCGGTGCCAAGAAGACGCCGCGGCGGGGGAGGAGC
GAAGGCGGCGCCGCCGACTCGGCCGCGTATGTCGCGGCGGTGTCCTGCTCCGACTGCCGCTTCAAGCAGCGCGCCCTGGC
GCCGGCGTCGCCCGGAGCCGTCATCCGCTCGCTGTTCGTCTCCCTCACCCGACGCTCCACCCCGCGCTCCTCGCCGTCTC
CGACATCGGCCTCGGAGGGCGACGCGGGTGAGGGCGAGCAGTGGCGCCTGGCCGCGGCCGACCTCTCGCGGCGGCTCGCC
GCGGCCACGCGGACGCGGGACGACGCGGTGGAGGAGACCTCGCGGCTGAAGCAGTCCCTCGCCGAGCTGGAGCTCAAGCT
CGCGCGCCTCGAGGCCCGCGTGCTCCCCACGCCGGCCGCCGCCGTCTTCCCCGTCGAGTCCTTCCTCCGCGCCGTCTCCA
CGGCGCGCGCCACCGTGCGGAACCTCACGCGCGCGCTCTCCACCCACCTGCGCAGCCCCGCGAGCCCCGGCCCGAACCTC
GAGAGCTTCCTGAACCGCGCCTTCCACGCGGACTTCGAGCTGGACACCGAGGGCGACGTCCACACCGCGGACCCGGCGGG
CCGGTGCGAGGCCAACCTCGCGGCGTACCACGCCGTGGCGGCGCTGACCTGGGAGGAGGTGCTCATCCACGGGACGAAGC
ACTACAGCGACGGGCTGAGCCGGTTCTGCGACGCCAAGATGAGCGAGGTGGTGTCCTCCCTCGGGTGGGCGCGCGCCCGC
CCGTGGCCGGAGCCGCTGCTGCAGGCCTTCTTCCTGGCGGCCAAGGGCGTGTGGGGGGTGCGCCTCCTGGCGCGGTCCGT
GCACCCGCCGCTGCCCGTCGTGCGCGTGGACCGCGGCGCGCGCTTCGACTCGCGGTTCATGGAGGACGCCGCGGCCTCGC
GCGCCGGGCGGCTGGAGCCGGCCAGCGTGAAGATGATGGTGGCGCCGGGGTTCCACGTGTACGTCGCCGGCGCCGGCGTG
GTCAAGTGCAAGGTCGTGTGCTTCTACAACAACAGCCGCACCGGCGGCCACATAGGTGGCGGGAGCAGCGCCAACGGCGG
CGAGGGGTTGGGGAGTAGCTGTAGCGATATGAATGGTGGCGGTACGGATGCGGTGAAGAGCTGTCAGAGTAGCAGGGTAT
AGT-AAAAAAAAGACACGAGGATTGTTATTTGTGTGGTAAAAACAGGACTTGCATTCAATTGATGTGTGAATATGGGGTG
TCAACTCCGCTCTTGTGAGTCACATTTCTTCATCTCGAACAGCATTTCTGCGCTGAGCGTGAAGTGAAGTGATCATCTTT
GGTTGGTAGCTGCACACTTCACCGTCATGGCGGCAGC-----CGCGCATGCCCGAGACAAAATCGGAAAATTGGTGATTG
GACCTTCCAACGATCTTGACTGGCCATGCGGGTGCTCCTTTCAGCGGAAACGATGCCATGTCATCGGATCCTTGGAGGTA
AGGCCAACTCCAATGCAAGGACGCATCGTCTGTTAGGATCCGCGCACAGAAAATACACGATCCACCGTCCACACAAATGG
GCGGATGTTCGT--------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>SNPs
------------------------SS------------------------------------------------------
---------S-----------------S-------------------S---------S-----S----------------
---------------S------------------------------------------------------------S---
-S---------------------------------------SSSSSSS-------------------S------------
---------------------------------S------S-S--------S-------------------S--------
--------------------------------S-----------------------S-----------------------
--------------------------------------------------------------------------------
----------------------------------S--------S------------------------------------
-------------------SSS--------------------------------S--S---S----SS------------
--S-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S--------------
-S----------------------------------S----S--------------------------------------
--------------------------------------------------------------------------------
----------------------SSS--------------------------------------------S-SSSS-----
-----------------------------SS--------------------SSSSSSSSSSSSS----------------
------------S------------S-------------------S-------------S--------------------
-------------------------------------------------------SS-----------------------
--------S-S-S-SSS--S-SS---------------------------------------------------------
-----------------------------------S--------------------------------------------
-------------------S----------------SSSSSS--------------------------------------
--S-----------------------------------------------------------------------------
---------------------------------------S--------------------S-------------------
-------------------S--S---------------------------------------------------------
-----------------------------------------S--S-----------------------------------
S-------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
-----------S-----------------------------------------------------S--------------
----------------------------------------------------------------S---------------
-------------------------------------------------------------------------------S
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S-----S-------------S----------------S---------
------------S-------------------------------------------------------------------
-----------------------S--------------------------------------------------------
-S------------------------------------------------------------SS----------------
----------S------------------------SSSSSSS-------------------S------------------
--------------------------------------------S------------------S--------S-------
--------------S---------------S---S-----------S-S----------SS---S----S-------S--
S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_282
--------------------------------------------------------------------------------
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----------------------TTCAGTTCCACACACGGGAG--------------------------------------
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>reverse_1640
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------GTCCCTCACCCGACGCTC-----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>forward_595
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TGAGGACGGACGAGCTAGAG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2573
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------CGGTAGCTGTAGCGATATGAA-----------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
>forward_2012
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------CCAACCTC
GAGAGCTTCCTC--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
>reverse_3364
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---TCTACCAAAACACCCTCGGC---------------------------------------------------------
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---------------------------------------------------------------------
