>input_sequence_52500
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------------------------------------------------------------------------TTCGCCAC
TTTCCTGCCTTCCTCCATTGCTCGCCAGGCCGTCCTTAAGCCAACTCAGGTAGCAGCAACTAGAGCCGACATGATGGCGG
AGGCGTGGATGGACGTGCTGCCGCCGCCGGCGCCCTACTTCGCCGGGCAGCCGTGTTGGGCCGTGCAGCAGGAGCGTCGC
GGAGGCGGCGCCTGGACGCTGGAGGAGAACAAGGTGTTCGAGGAGGCGCTCGCGGCGATCGACCTGGACGCGCCGGACCG
GTGGGAGATGGTCGCGCTGATGTTGCCCAGGAAGACGGTCGCCGACGTGGTGAACCACTACCGGGCCCTCGAGAACGACG
TCGGGTTCATCGAGGCCGGGCTGGTCCCGTTCCCTCACTACGACAGCTCGTCCCCTTCGTCCGGGTTCACTCTGGACTGG
GACGGGGGCGCCGCCGGCGCCGGCGGGTTCCGGCGCGGCTACTGCCTCAAGCGCGGGCGCGCCGACCAGGAGCGGAAGAA
GGGCGTCCCGTGGACGGAGGAGGAGCACCGGTAAGCCGCCGTCTTGGTGATCTTCTTCTTGTGCTTGGATGGTTGGTTGC
-------GGAAATCTGATCGCGTTCTTGCGCTGCGTGCAGGCTCTTCTTGAAGGGGCTGAAGAAGTACGGGCGAGGGGAC
TGGAGGAACATCTCCCGCAACTACGTGACGAGCCGCACGCCGACGCAGGTGGCCAGCCACGCGCAGAAGTACTTCATCCG
GCTCACCTCCGGCGGCAAGGACAACAAGCGCCGCTCCAGCATCCACGACATCACCACCGTCAACGTGCCCGACGACGACG
ACCGCGACAGCCCCTCAGGGTCACCGCCGTCCGTGGTCACCACCGTCGACACGAAGCCCTCGCCGTCCTACGGGGGGCAA
CGGCATGCCTTCGTGCCGTCGACGCTGCCAGCGGGGACGCTCGGCGGCGGCCACCCGTACGGCAACGTGAAGCTCGAGCA
CCAGAGCTCGTTCATGTCCGGCGCGGGCCTCGACCTCGACGACTCGCTCCTCCTGCAGATGCAATGCGGCCAGCTGTGAC
GGAGCTTTCTCGCCGCGGCGAAGCCCGCACGGAGGACAAAACAGCGGCGGCCACCTCTCACCATCATCGCATCCACGGGC
GCTACCACACCAGGGACGAGGCAGGCAGGCGGGCGC-GCTTGCCTCGAGAGCAGTTTGGTTGCAGAGTCGCTGTGCTTGT
GTCTCTCTCGACCGACACTCAGATGATGGAACGCAAGCGAAAATATCTGAGAGCGACACGGCGGTGTTGAGCGTACGTGC
AGGTCTGCGTCCATGGAGAAACCTCAAGAACCCATCGG-CGTGCCGTCCAGTGTACATAATTCCGCCACACCCAAGAACC
TCCACTGTACTGAAAAAAGAAT-CTGTAATAAGCCTTCGATGAAGCT---------------------------------
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>chr3D_1_TraesCS3D01G360500
CAAAAGGGAGGCACATATGCTATGTGTTGCAAGTTTTTTTTACTTTGCATTATGTCTGCGACAATAATGTTGTACTTTGT
ACAATGTCTCATAAATACATGTTTGAAAAAAAATCTGAATAAGTTCTTACATGTGTAACAAAAATTTATACACCTACATA
TCCTAGTTATGAAAGACGATCAATTCCTTCGATTTCGTCTCTTCAAGGATCGACTCAACTCCAAGAGCAACCTCTTCAAG
AAGACCATCAC-------------------------CCCCAACGGCCACTGCCCCAT---ATGCAACGCTCCAGTTGATG
ACGACCTTCACATGTTCATTCAGTACCCCATAGGCATCCAAATTTGGGATGCCCTATTCCTCTTGGTGCCGCCCTCCATC
GAGCTCATTTGGGATACCCCCATGTTGTCGAACCTCCACGGTGACATTAGGTCGTCGATTGCTCTCTCCTTGCTATGGAA
AATTTGGGATTCCAGAAACATTCTTGTCTTTTGCAACGAACTCCACTCCGCAAGGACCAATGTTAGAAATTTAGCTAGTG
ACTTCACTCTTTGAACTTTCAGATACGAAAATGTCTCTAA-AAGGATGCCTTCATGTCATGGCGTCAATACCTCTCCTCA
CGCTCTAGCGCACAATTGCAAAGCTCGCCTTGTAGTCGTTTTTGAGTAATGCATTCGCGTAGGGATTCTCTCCCC-TAGT
GATTGGTCA-AAAAATCAATTCCTTTGGTTAAAATAATTCATACATGTCTGAAAAAGCAAGACATATATATTCACCAAAA
CTGAATCTTGTTACCATTAGTTAGCACCCTCCTC-TTTACCTCTTGTGCTTGGTTGAGAGGCCACAAACTCCACCAAGGC
CCAATCACAAGCATCCACTTTCTTTTTGCTCATCTTCTCAAGGCCTCCAACGGTGGAGGCGGAATAAACTCCGGCCGCTT
TTTGTAGCCGCCCGGAATTTGATACTCCCCCGGTCCTCCCCTATATAGGCACGCCTCCTTCCACCTCCCCCCTTCGCCAC
TTTCCTGCCTTCCTCCATTGCTCGCCAGGCCGTCCTTAAGCCAACTCAGGTAGCAGCAACTAGAGCCGACATGATGGCGG
AGGCGTGGATGGACGTGCTGCCGCCGCCGGCGCCCTACTTCGCCGGGCAGCCGTGTTGGGCCGTGCAGCAGGAGCGTCGC
GGAGGCGGCGCCTGGACGCTGGAGGAGAACAAGGTGTTCGAGGAGGCGCTCGCGGCGATCGACCTGGACGCGCCGGACCG
GTGGGAGATGGTCGCGCTGATGTTGCCCAGGAAGACGGTCGCCGACGTGGTGAACCACTACCGGGCCCTCGAGAACGACG
TCGGGTTCATCGAGGCCGGGCTGGTCCCGTTCCCTCACTACGACAGCTCGTCCCCTTCGTCCGGGTTCACTCTGGACTGG
GACGGGGGCGCCGCCGGCGCCGGCGGGTTCCGGCGCGGCTACTGCCTCAAGCGCGGGCGCGCCGACCAGGAGCGGAAGAA
GGGCGTCCCGTGGACGGAGGAGGAGCACCGGTAAGCCGCCGTCTTGGTGATCTTCTTCTTGTGCTTGGATGGTTGGTTGC
-------GGAAATCTGATCGCGTTCTTGCGCTGCGTGCAGGCTCTTCTTGAAGGGGCTGAAGAAGTACGGGCGAGGGGAC
TGGAGGAACATCTCCCGCAACTACGTGACGAGCCGCACGCCGACGCAGGTGGCCAGCCACGCGCAGAAGTACTTCATCCG
GCTCACCTCCGGCGGCAAGGACAACAAGCGCCGCTCCAGCATCCACGACATCACCACCGTCAACGTGCCCGACGACGACG
ACCGCGACAGCCCCTCAGGGTCACCGCCGTCCGTGGTCACCACCGTCGACACGAAGCCCTCGCCGTCCTACGGGGGGCAA
CGGCATGCCTTCGTGCCGTCGACGCTGCCAGCGGGGACGCTCGGCGGCGGCCACCCGTACGGCAACGTGAAGCTCGAGCA
CCAGAGCTCGTTCATGTCCGGCGCGGGCCTCGACCTCGACGACTCGCTCCTCCTGCAGATGCAATGCGGCCAGCTGTGAC
GGAGCTTTCTCGCCGCGGCGAAGCCCGCACGGAGGACAAAACAGCGGCGGCCACCTCTCACCATCATCGCATCCACGGGC
GCTACCACACCAGGGACGAGGCAGGCAGGCGGGCGC-GCTTGCCTCGAGAGCAGTTTGGTTGCAGAGTCGCTGTGCTTGT
GTCTCTCTCGACCGACACTCAGATGATGGAACGCAAGCGAAAATATCTGAGAGCGACACGGCGGTGTTGAGCGTACGTGC
AGGTCTGCGTCCATGGAGAAACCTCAAGAACCCATCGG-CGTGCCGTCCAGTGTACATAATTCCGCCACACCCAAGAACC
TCCACTGTACTGAAAAAAGAAT-CTGTAATAAGCCTTCGATGAAGCTTGTGCTCCGGTGT------------------GC
TCCGGTCAGGAGCTAGCTAGCGCCGGCCTGAAAATTGGTTCGAACG---------------TTTCTCTGTCTATTGTACT
CCAAATGA-----------------------ATCCGTCGCCATTGTTAAACTTGCGCCGCCTGCCTCCCCGTGAGAGGTT
TCGATTTGGCTTTGCTCTCTCGCTCGCTCACGGCTCACCTCACCTGAAACCCTCCATGCCATG-----TGCTGCCGGCCT
AGCCTGGCGAGCGACCGGGCTTCTCATTAATGCCGATC----TCGTCCCGTCCGTCGTCTCCGCCACAAATATTGAATTC
TCGTCTTCGCAGGCCCGGGC--AAACTAGTCCGCCTCGTGCTCCTTGCTCAGGCTGCCCTGCCCGCCCATGCGCAGGTGC
CGGGCTCCGTCCGCCCTGGCGATTCCGTCCGCGCCACCT----CTGGCTGACTCCCAGTTGGCCAGTTGCTTGCCGGGAG
AAAGAAAGAA-GGAGAGTATCAATTTGATTCGTCAATCAGGTCGACGGGAAGTGCCTCGCCTTGCCTGATAGTGGCTGCC
ACGCTGCACGCAGCATCAATATA----CTGTAGGAGTAGTAGGGAGGGGATGAGTTGGAGGTCCACCCAGCCCGGCCAGC
GAGCGAGCA----AGCCAAAAGAAAAGCATCACATGCCCCAACAGCAGCGAATCCCGTGTCCTTCTCGCTGTCGTCTCCC
TTTTCGTCCCCTTCCTTCCTCCCCAGAGGAAAAGAAAAGCAAACTAGCAAAGCCTCGGCGCCGGCCGGCCCTGTACGCTC
GCACCATTCTCCATCGGTGGCGGTGGGCGCACGCTGTCGAGGGCACGGGCACGGCCGCAGTAGTGAGCCTCAGAGCAAAC
TCTAACGGGCCGACCCAAACGGAAGGTCCGCTTTTTGTCCGTTTGGGTCGGCCAGGCGGACACGGATGTCCGTTTTTGCG
TTTGGGTCGGCGCGTGCGCTCAACGCTGGCCTGACCCATTTTGACGGCGGTAGAAAAAAAATAAACGCATGCATATTAAA
AAAGCGA
>chr3A_1
CAAAAGGGAGGCACATATGCTATGTGGTGCAAGTTTTTTTTACTTTGCATTATATCTGCCACAATAATGTTGTACTTTGT
ACAATGTCTCATAAAAACATGTTTCAAAAACAATCTGAATAACTTCTTACATGTGTAACAAAAAATTGTACACCTACATA
TCCTAGTTATGGAACATGATCAATTCCTTCGATTTCGTCTCTTCAAGGATCGACTCAATTCCAAGAGCAACCTCTTCAAG
AAAACCATCACCCCTTTTGCAAAAAAAAAAAATTCACCCCAACGGCCACTGCTGCCCTAGATGCGAGGCTCCAGTTGATG
ACGACCTTCACATGTTCA----GTACCCAGTAGCCATCCAGATGTGGGATGGCCTACTTCACCCGGTGCCACCCTCCATC
GAGCTCATTTGGGTTGTCCCCACGCTGTCGGATCTCCATGACGATATTTCGCCATCGATTGCTCTTTCCTTGTTATGGAA
GATTTGGGATTCCAGAAACATGCTTGTCTTTGGCAACGAACTCCACTTTGCAAGGACCAATGTTAGAAATTTAGCTAGCG
ACTTCACTCTTTGAACTTT---ATACGAAAGTGTCTCTAAGAAGGATGCCTTCATGCCATGGCGTCAATACCTCTCTTCA
CGCTCTAGCGCACAATTGGAAAGCTCGCCTTTTACTCGTCTTTGAGTAATGCATTCGGGTATGTATCCTCTCCCCTTAGT
GATTTGTCA-AAAATTCAATTCCTCCGGTTAAAATAATTCATACATGTCTGAAAAAGCAAGACATATAT--TCAACAAAA
CTGAATCTTGTTACTATTAGCTAGCACTCTCCTCTTTTACCTCTTGTGCTTGGTTGAGAGGCCACAAACTCCACCAAGGC
CCAATCACAAGCATCCACTTTCTTTTTGCTCATCTCCTCAAGGCCTCCAACGGTGGAGGCGGAATAAACTCCGGCCACTT
TTTGTAGCCGCCCGGAATTTGATACTCCCCCGGTCCTCCCCTATATAGGCGCGCCTCCTTCCACCTCCCCCCTTCGCCAC
TTTCCTGCCTTCCTCCATTGCTCGCC-----GTCCCTAAGCCAGCTCAGGTAGCAGCAACTAGAGCCGACATGATGGCGG
AGGCGTGGGCGGACGTGCTGCCGCCGCCGGCGCCCTACTTCGCCGGGCAGCCGTGCTGGGCCGTGCAGCCGGAGCGTCGC
GGAGGGGGCGCGTGGACGCTGGAGGAGAACAAGGTGTTCGAGGAGGCGCTCGCGGCGATCGACCTGGACGCGCCGGACCG
GTGGGAGATGGTCGCGCTGATGCTGCCCCGGAAGACGGTCGCCGACGTGGTGAACCACTACCGGGCCCTCGAGAACGACG
TGGGGTTCATCGAGGCCGGGCTGGTCCCGTTCCCTCACTACGACAGCTCGTCCCCTTCGTCCGGGTTCACCCTGGACTGG
GACGGCGGCGCCGCCGGCGCCGGCGGGTTCAGGCGCGGCTACTGCCTCAAGCGCGGGCGCGCCGACCAGGAGCGGAAGAA
GGGCGTCCCGTGGACGGAGGAGGAGCACCGGTAAGCCGCCATCTTCGTGATCTTCTTCTTGTGCTTGGATTCTTGGTGGC
-------GGAAATCTGATCGCGTTCGTGCTCCGCGTGCAGGCTGTTCTTGAAGGGGCTGAAGAAGTACGGGCGAGGGGAC
TGGAGGAACATCTCCCGCAACTACGTGACGAGCCGCACGCCGACGCAGGTGGCCAGCCACGCGCAGAAGTACTTCATCCG
GCTCACCTCCGGCGGCAAGGACAACAAGCGCCGCTCCAGCATCCACGACATCACCACCGTCAACGTGCCCGACGACGACG
ACCGCGGCAGCCCCTCGGGGTCCCCGCCGTCCGCGCTCACCACCGTCGACACGAAGCCCTCGCCGCCGTACGGCGGGCAA
CGGCACGCCTTCGTGCCGTCGACGCTGCAGCCGGGGACGCTCGGCGGCGGCCACCCCTACGGCAGCGTGAAGCTCGAGCA
CCAGGGCTCGTTCATGGACGGCATGGTCGTCGACCTCGACGAGTCGCTCCTCCTGCAGATGCAATGCGGCCAGCTGTGAC
GGAGCTTTCTCGCCGCGGCAAAGCCCGCACGGAGGACAAAACAGCGGCGGGCACCTATCACCATCATCGCATCCACGGGC
G-----------------------------------TGCTTGCCTCGAGAGCAGTTTGGTTGCAGAGTCGCTGTGCTCGT
GTCTCTCTCGACCGACACCCAGATGATGGAACGCAAGCCAAAACATCTGAGAGCGACGCGGCGGTGCTGAGCGTACGTGC
AGGTCTGCGTCCATGGAGGAACCTCAAGAGCCCATCGA-CGTGCCGTCCCGTGTACATAATTCCGCCACACCCAAGAACC
TCCACTGTACCGAAAAATATATCCTGAAATAAGGCTTCGATGAAGCTTGTGCTCCGG-----------------------
-----TCAGGAGCTAGCCAGCGCCGGCCTGAAAATTGGTTCGAACTTCGAAGTTCGAGCGTTTTCTCTGTCTATTGTACT
AGTCCAAAT-------------------GAGATCCGTCGCCATTGTTGCTCCCT--CCGCCTGCCTCCCCGTGACAAGTT
TCGATTTGGCTTCGCCCTCTCCGTGCG-----------CTCACCTGAAATCCTCCATGCCATG-----TGCTGCCGGCCT
GGCCTG----GCGACCGGGCTTCTCATTAATGCCGATC----TGGCTCCGTCCGTCGTCTCCGCCACAAATATTGAATTC
TCGTCTTCGCAGGCCCGGGCATAAACTAGTCCGCCTCGTGCTCCTTGCTCCGGCTGCCCTGCCCGCCCATGCGCAGGTGC
CGGGCTCCGTCCGCCCTGGCGATCCCGTCCGCGCCACCTCTGGCTGGCTGACTCCCAGTTGGCCAGTGGCC----GGGAG
AAAGAAAGGA-GGGGAGTATCATTTTGATTCGTCAATCAGGTCGACGGCAAGTGCCGTGCCTTGCCTGATAGTGGCTGGC
ACGCTGCACGCAGCAGCAATATACGTACTGTAGGAGTATACGGT--GGTATGAGTTGGAGGCCCACCGAGACGGACCAGC
GAGCGGGCGAGCGAGCCAAAAGAAAAGCATCACATGCCCCAACAGCAGCGAATCCCGTGTCCTTCTCGCTGTCGTCTCCC
TTTTCGTCCCCTTCCTCGGCG----------------------------------CGGCAACGGCCGGCCCTGTGCGCTC
GCACCATTCC---TCAGTGGCGGTGGGCGCACGCTGTCGAGGGCACGGGCACGGCGGCAGTAGTGAGCCTCA--------
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>chr3B_302
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---------ACATGTTCATTTAATGCCCCGCAGCCATCCAGACCTAGGATGCCCTACTCCTCCCGGTATCGCCCTCCATC
GAGCTCATTTGGGATGTCCCCACGCTGCTGGACCTCCATGGTGATATTTGGTCGTCGGTTGTTCTCTCCTTGCTATGGAA
TATTTGGGATTCCAGAAACAAT-TTGTCTTTCGCAACGAACTCCACTCCGTAAGGACTAGCGCTAGAAATTTAGCTAGTG
ACTTCACTCTTTGAACTTTCAGATACGAAAACGTCTCTAAGAAGGATGCCTCCATATCATAGCGTCAATACCTCTCCTCA
CA--CTAGCACACAATTGCAAAGCTTGCCATTTGGTCGCCTTTGAATAATGCATTCGA-TAGGGATCATCTCCCCCTAGT
GATTGGTCACAAAAATCAATTCCTTCGGTTAAAATAATTCACACATGTCTGAAAAAGCAAGACATATAT--TCAACAAAA
CTGAATCTTGTTACCATTAGTTAGCACTCTCCTC-TTTACCTCTTGTGCTTGGTTGAGAGGCCACAAACTCCACCAAGGC
CCAATCACAAGCACCCACTTTCTTTTTGCTCATCTTCTCAAGGCCTCCAACGGTGGAGGCGGAATAAACTCCGGCCACTT
TTTGTAGCCGCCCGGAATTTGATACTCCCCCGGTCCTCCCCTATATAGGCATGCCTCCTTCCACCTCTCCCCTTCGCCAC
TTTCCTGCCTTCCTCCATTGCTCGCC-----GCCCTTAAGCCAGCTCAGGTA---GCAACTAGAGCCGACATGATGGCGG
AGGCGTGGGTGGACGTGCTGCCGCCGCCGGCGCCCTACTTCGCCGGGCAGCCGTGCTGGGCCGTACAGCAAGAGCGTCGT
GGAGGCGGCGCCTGGACACTGGAGGAGAACAAGGTGTTCGAGGAGGCGCTCGCGGCGATCGACCTGGACGCGCCGGACCG
GTGGGAGATGGTCGCGCTGATGCTGCCCAGGAAGACGGTCGCCGACGTGGTGAACCACTACCGGGCCCTCGAGAACGACG
TCGGGTTCATCGAGGCCGGGCTGGTCCCGTTTCCTCACTACGACAGCTCGTCCCCTTCGTCCGGGTTCACTCTGGACTGG
GACGGCGGCGCCGCCGGCGCCGGCGGGTTCAGGCGCGGCTACTGCCTCAAGCGCGGGCGCGCCGACCAGGAGCGGAAGAA
GGGCGTCCCGTGGACGGAGGAGGAGCACCGGTAAGCCGCCATCTTCATGATCTTCTTCTTGTGCTTGGATTGTTGCTTGT
TGTTGGTGGAAATCTGATCGTGTTCGTGCGCTGCGTGCAGGCTGTTCTTGAAGGGGCTGAAGAAGTACGGGAGAGGCGAC
TGGAGGAACATCTCGCGGAACTACGTGACGAGCCGCACGCCGACGCAGGTGGCCAGCCACGCCCAGAAGTACTTCATCCG
GCTCACCTCCGGCGGCAAGGACAACAAGCGCCGCTCCAGCATCCACGACATCACCACCGTCAACGTGCCCGACGACGACG
ACCGCGGCAGCCCCTCGGGGTCCCCGCCGTCCGCGCTCACCACCGTCGACACGAAGCCCTCGCCGTCGTACGGCGGGCAA
CGGCACGCCTTCATGCCGCCGACGCTGCCAGCGGGGACGCTCGGCGGCGGCCACCCCTATGGCAACGTGAAGCTCGAGCA
CCAGAGCTCGTTCATGGACGGCGCGGGCCTCGACCTCGACGACTCGCTCCTCCTGCAGATTCAATGCGGCCAGCTGTGAC
GGAGCTTTCTCGCCGCGGCGAAGCCCGCACGGAGGACAAAACAGCGGCGGCCACCTATCACCATCATCGCGTCCACGGGC
GCGGCCGCACCAGGGACGAGGCAGGCGGACGTGCTCTGCTTGCCTCGAGAGCAGTTTGGTTGCAGAGTCGCTGTGCTTGT
GTCTCTCTCGACCGACACTCGGATGATGGAACGCAAGCGAAAACATCTGAGAGCGACACGGCGGTGTTGAGCGTACGTGC
AGGTCTGCGTCCATGGAGAAG-CTCAAGAACCCATCGATCGTGCCGTCCAGTGTACATAACCCCGCCACAAGTATACGGC
C-------ACTGTACCGAAAAT-CTGAAATAAGCAGTTCATGAAGCTTGTACTCGTTCGCCGTTGTCGCCGGCCGGCGGC
TCCGATCAGG----AGCTCGCACCGGTGTGAAATTTGGTTAGAGCG---------------CTTCTTTCAGTTTATCGTT
GCTAGTTATGCGTGTGAGAAGCTTTCGCGAGATCCGTCGCCATTGCTGCACCGCCTCC----GCCTCCCCGTGAGAAGTT
TCGATTTGGCTTCGCTCTCTCGCTC-------GCTCACCTCACCTGAAATCCTCCATGCCATGCCATGTGCTGCCGGCCT
AGCCTG----GCGACCGGGCTTCTCATTAATGCCGATCGATCTCGTTCCGTCCGTAGTCTCCGCCACAAATATTGAATTC
TCATCTTCGCAGGCCCGGGCATAAACTAGTCCGCCTCGTGCTCCTTGCTCCTG-----CTGCCCGCCCATGCGCAGGTGC
CGGGCTCCGTCCGCCCTGGCGATTCCCTCCGCGCCACCT----CTGGCTGACTCCCAGTTGGCCAGTTGCT----GGGAG
AAAGAAAGAAAGGAGAGTATCAATTTGATTCGTCAATCAGGTCGACGAGAAGTGCCTTGCCTTGCCTGATAGTGGCTGGC
ACGCTGCACGCAGCATCAATATA----CTGTAGGAGTAATAGGGAGGGGGTGAGTTGGAGGTCCACCCAGCCCGGCCAGC
GCGCGAGCA----AGCCAAAAGAAAAGCATCACATGCCCCAACAGCAGCGAATCCCATGTCCTTCTCGCTGTCGTCTCCC
TTTTCGTCCCCTTCCTT----CCCAAAGCAAAAGGAAAGCAAAGCCTCGGCGC--CGGCCACGGCCGGCCCTGTACGCTC
GCACCATTCTTCATCAGTGGCGGTGGGCGCACGCTGTCGAGGGCACGGGCACGG--------------------------
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>SNPs
--------------------------S--------------------------S-----S--------------------
---------------S--------S-----S-----------S---------------------S--S------------
-----------S--S-S-----------------------------------------S---------------------
--S-------------------------------------------------SS-SS-------S-S-------------
--------------------S--------S---S------S--S------------S-----SS----------------
---------------SS-----S-S-----S-------S-----S---S-------------------------------
S------------------------------S------------------------------------------------
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-------------------------------S-------S-----------------S--------S-------------
-------------------------S-------------------------------------------SS---S-----
---------------------------S----------------------------------------------------
----------------------------------------------------------------------------S---
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--------------------------SSSSS------------S------------------------------------
--------S----------------------------------------------S------------------------
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----------------------S---------------------------------------------------------
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-----S------------------------S-------------------------------------------------
----------------------------------------S----S------------------------S---------
-------------------------S-----------------S------------------------------------
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------S---------S-----S----------S-S-------------------------------S-----S------
-----S--------------------------------------------------S-----------------------
----------------SS--------------------------------------------------------------
--------------------------------------------------------S-----------------------
--SS--S-------------------S-S--S--S---------------------------------------------
-------------------------------------------S------------------------------------
-------------------------------------S------------------------------------------
------------------S-------S------------------------------S-S--------------------
----S---------------------------------------------------------------------------
S-S-S-S----------------------------------------SS--SSS-S--------------------S---
------------S------------SSSSSSS-----------------S------------------------------
------SSSS------------------------------------S---------------------------------
--------------------------------------------------S-----------------------------
-----------------------------------------------------------------------SSSS-----
---------------------------------------------------------S--------------------S-
--------------------------------------S-----------------------------------------
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-----------------SSSS----S--S-----S--------SSSS-SSS--SS----SS-------------------
----------S----S---------------------------------------S----------------SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS
>forward_680
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--------------------AAGCTCGCCTTGTAGTCGTT----------------------------------------
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>reverse_2672
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-------------------------------GGCTCACCTCACCTGAAACC-----------------------------
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