>input_sequence_52496
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----------------------------------------ATGAATTCAGTCA----GGGTCACACAGGGGGTAAGGCAT
CCCGATGCGGTAAGGAACCA------GGTTCTGAATTCGGGCAGCGTCAACTCAATCTGAGGGGG-AGGCTGCCCTGCAG
TTCTGGACCAAGAGGGAAATCATTGGTCCTTTTTAGACAAAAAAATGCAATTGGCAACACGTATGACTGTTGTTCTTTAT
GACTGTTTA---GTTTAGTATTGTGGCATTCCTGGGAAGCTTGCAGGTGCAGATACAGGGAAACTAGCTGCTTCTACTTT
GGTTTGATACATAT------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GTAATGAC------TTGCATAGTGTCTGCTTGCGGGTGCAGAGGGTGACTTGCAA----GGGTTTCCTGCCCCCA
GGGACCCGGACATGGA--TACCCTCCTCTTAGAATCCAGATGGGCTCAATCACTTCTGTAGTTTATGAGCTCGATAGTTT
ATGATCTCGATGTTTGTACCACTGACTAAACG---TGTAGATGTTTGCAATTCTTTCTGTGCATGTAGCTGACTATGGTT
GCTCAAAATTATTTCAGTTGCTTGAGAGAGCCCTTGAAGTGTATGGAAATGATTTGGATGATGCAATAAAGAGTTTGAAG
GACCTGCACCTGATGGAGTCAAATCAGGGTAACCT---------------------------------------------
----------------------------------------ATCGTCCACTGGTTCCACTTTTGAAAATGGGCCGACAGCA
GTTCAGCCATCTGTTGAAGGTTCATTTTCCACCAAAAGCTATTCAATTCCTACGGTACATATTAGTAATTTTCAACATTG
TGCTTCCTCGTGCATTTGTCCCAGTTGCAGTAAC----CACACACACACAATAGTGCAGTAATATTATTTTCGTATTTTA
GATATCTAGAAACCCTGCATGTTGCATTTACCTATGTTTTATTGCTACATTTCTACAAGGTCATGTGCTGTCATTTCAAA
ACAGAGAACATGCGTGGATCCATT--TGTGT--CATATGAACTTATGGAGTATGCATGTCACTCTATGTGATTGTCTACC
CGTAGAGTCAGATCACCGCACCCTCGGCCATTCTTACATGTTTTGCGTTGATT-AGAACAACCGTT--CATCTGTCTATC
CAGTAGCACCAAACACTCAATTTCTTGCACTATTACATACCACATGACTGCTCTATA-----------ATGATTAGTCGT
ATCTCACTTATTTCCTACCCCATTTTGTTAATTTCATAAGCTTATCATCATATTGACAAGAGCAACAATGTTTCT-TATG
TTGAT-------AGGTGTTGTTACCAGCGGAGGTGTGGACA-------------------------------CAGCTACT
GAACACCAACCTGCCACAGCT---AGCCACCAGCCACGTAATAGTGGCCCTAAATGGGTCGATCTTTTTGTGAGAGAGAT
GTCAAATGCTTCTGACATGGGACAGCGCTCAAGCTTGTGCTTCAAGAGCTGTGGAAGCCTTGACGAAGTCTATTCTGGAG
GGTGCAGGAGCTGA------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>chr3A_1_TraesCS3A01G181600
ACAGGCAAAAAAATAGCAGTTCTGGTTTGGGCCTCTGGTTAATAGGTTAGTCCCAAAAATAATATAAAAGTGGATAATAA
AGCCCAATAATGTCCAAAACAATCAAGAGATAAGGGAAGGATGTTCCTACAAGGCTTCACAGAGATCAGCGATTCTGGGC
CGTTGGATCGGGTCCCTTGATGCGTTTTCGTCCGTTGGATCGAGAGGTGGGAGGATCTGGGTCGTCGGATCTGGAAGAAA
CACTGCTGGAATGAATAGTAATGGCAACAGAATGTAAATACCATGCCCCCACCAGGGCATTTTGGTCATTTCACATGGTG
GGGGTATAAAAGGGGCCACGCCCGTGGAGATGACCTAGCCGCCTCTCTCTCCCGCACTCGCGCAGCCGCCTCCCTCCCTC
CCTCCCTCGCGCCTTCGCCCCGCGCCTCCACCGCGCCCAGCTCCTCCCGCCTCGCCGCCGCCTCCTTTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNGGCGCCGTCGGCGGCCAGATCCGCCGCAGCAGAGCGCCCCCCCCCCCCACGACGACCAGCAG
CAGAGGAGGGAGGACGAGGAGCATGACGGCGGCGGCGGCAGGGAGCAGCAGTAGCAGGCGGAGGCGCTGTGCTTGCAAGC
CTCCCAAATCCCAAATCCCCACCCGACAGGTTTACGCGTGCTCATTTCCTTGGCTGATGCGGAAGGGGAGGCTTGCAATG
CTGATGCGTAAGGGGAGGCTTGCAAGCAACCCCAGTCTGAATGAATTCAGTCA----GGGTCACACAGGGGGTAAGGCAT
CCCGATGCGGTAAGGAACCA------GGTTCTGAATTCGGGCAGCGTCAACTCAATCTGAGGGGG-AGGCTGCCCTGCAG
TTCTGGACCAAGAGGGAAATCATTGGTCCTTTTTAGACAAAAAAATGCAATTGGCAACACGTATGACTGTTGTTCTTTAT
GACTGTTTA---GTTTAGTATTGTGGCATTCCTGGGAAGCTTGCAGGTGCAGATACAGGGAAACTAGCTGCTTCTACTTT
GGTTTGATACATAT------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GTAATGAC------TTGCATAGTGTCTGCTTGCGGGTGCAGAGGGTGACTTGCAA----GGGTTTCCTGCCCCCA
GGGACCCGGACATGGA--TACCCTCCTCTTAGAATCCAGATGGGCTCAATCACTTCTGTAGTTTATGAGCTCGATAGTTT
ATGATCTCGATGTTTGTACCACTGACTAAACG---TGTAGATGTTTGCAATTCTTTCTGTGCATGTAGCTGACTATGGTT
GCTCAAAATTATTTCAGTTGCTTGAGAGAGCCCTTGAAGTGTATGGAAATGATTTGGATGATGCAATAAAGAGTTTGAAG
GACCTGCACCTGATGGAGTCAAATCAGGGTAACCT---------------------------------------------
----------------------------------------ATCGTCCACTGGTTCCACTTTTGAAAATGGGCCGACAGCA
GTTCAGCCATCTGTTGAAGGTTCATTTTCCACCAAAAGCTATTCAATTCCTACGGTACATATTAGTAATTTTCAACATTG
TGCTTCCTCGTGCATTTGTCCCAGTTGCAGTAAC----CACACACACACAATAGTGCAGTAATATTATTTTCGTATTTTA
GATATCTAGAAACCCTGCATGTTGCATTTACCTATGTTTTATTGCTACATTTCTACAAGGTCATGTGCTGTCATTTCAAA
ACAGAGAACATGCGTGGATCCATT--TGTGT--CATATGAACTTATGGAGTATGCATGTCACTCTATGTGATTGTCTACC
CGTAGAGTCAGATCACCGCACCCTCGGCCATTCTTACATGTTTTGCGTTGATT-AGAACAACCGTT--CATCTGTCTATC
CAGTAGCACCAAACACTCAATTTCTTGCACTATTACATACCACATGACTGCTCTATA-----------ATGATTAGTCGT
ATCTCACTTATTTCCTACCCCATTTTGTTAATTTCATAAGCTTATCATCATATTGACAAGAGCAACAATGTTTCT-TATG
TTGAT-------AGGTGTTGTTACCAGCGGAGGTGTGGACA-------------------------------CAGCTACT
GAACACCAACCTGCCACAGCT---AGCCACCAGCCACGTAATAGTGGCCCTAAATGGGTCGATCTTTTTGTGAGAGAGAT
GTCAAATGCTTCTGACATGGGACAGCGCTCAAGCTTGTGCTTCAAGAGCTGTGGAAGCCTTGACGAAGTCTATTCTGGAG
GGTGCAGGAGCTGAAGC-GCACAGAGCTTGCTTCAGGTAGCCGCTAAATAAATGTCTCGAGTAGGAAATAGCCCTAGGAT
TATAATTAGAGAATAGTGATGCCTGACAAGATCCTCTT---TT-TTTCTTGGCAAATCAGGAAAACATGGTGCTCAAGGA
GCAGGTGACGGCCGTCCTGTCGTAGAACGGGGTCCTGAATTTGTTTATATATTTGTTAGATGTACGAGCAGCAGAAGAAA
ATCTCCCCTCCGCTCATTGTTGGTGGTTGAGACTCGGGTCGTCGATGCAAATCAATCAAGTGCCCCCATCTTTAGTTATT
CTGTTTGGTGGTAC------------------------------------------------------------------
-----------------------GTGGATCTGGAATGTGCTTAATGTTTCCCAGTAGAAAGCTTAGTATTGCTATGTGTT
GTTCAGCATTGGCTCATGGTAATAAATGGTTCC-GTTTAGGGCG-AATTTATCACTCATTGTTTTTTCCAGAGTGAGTTA
TAATCAATAATAATTGTTCCCTTTGTGAGCGAGCTTATTGTTCTTTTTC-ATTTGCAGAATGGGGAGTTGATGAACCCGG
GGTAGCGACAGATATACCTTATCTTCCCGGCGGACAGCACCTTCCACGAGGATGACGTCTCCAACTACTCCAGGTACATC
ACCATGCTCGCTCACACACCACAGTCCTACCTCTGCTCCGCCTCGAAGTCTC-CCGGGATTAACCATGCTCGTCCTCTGA
ATCGTAGCATCTACGGTCCTGTCCATGATGTGCGCATCCCCTACCAGCAGAACCACATGTTTGGGTTCGTCACCTTCGTC
TACAAGGAGAAGGGCAAGGTCCCCGGCAAGTTCAGGCAAGCCCACGACAATCTTTGCCTCTTGCTTCCGGTAGCAGTGAC
----AGCAACATCCCCATGACCATTTATTTTTGCCGTTGCTCT----------------------GTAGGAAGCAGAAGG
GCGAGACGGTGGACTTCTCTACCTGCGGGTCTCCCAACTATTGTATCTACTTGATTGTCTTCTGTTATCCAGATCGAAAT
TGTCCTAAGAATGAGGCA
>chr7A_101
--------------------------------------------------------------------------------
--------------------AATCAAGAGAGAAGAG--------------------------------------------
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--------------------------------------------AAGGATGTTCCTACAA----GGCTTCACAGAGTTCA
GCGACTCTCGGCCGTCGGATCAAAACGCTTGATGG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GTTTTGGGCCGTTGGATCAAGAGGTGGGAG
TATCTGGGCCGTCGGATCTGAAAGAAACACTGCTGGAATGAATAGTAATGGCAACAGAATGTAAATACCATGCCCCCACC
AGGGCATTTCAGTCATTTCGCGTGGTGGGGGTATAAAAGGGCCGGCCGCTCCTGTGACGG--------------------
--------------------------------------------------------------------------AGACCT
AGCCGCCTCCTCCCTCGCTCGCTCCCGCAGCCAC----CTCCCTCCTCCCTCGCTCGCGCCTCCGCCCCG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CGCCTCCCCCGCGCCCAGCTCGTCCCGCCTCGCCGCCGCCTCCTCTCCCCTCCCGCGC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------GCCTCCTGTCCCCTCTGCTCCCCTCTCGCGCGCCTCCTCTCCT
CCCATCCACATCGCCGCCGCCGCCACCCACC-------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------GCCTCGAACAGCGCCGTTGGC--------------------
--------------------------------------------------------------------------------
------------GGCCAGATCCGCCGCAGCAGA-----------------------------------------------
--------------------------------------GCCCCCCCCCCCACCACGACGACGAGCAGCAGAGGAGGGAGG
ACGAGGAGCATGACGGCGGCAGCGGCGGGGAGCAGCAGCAGCAGGCCAAGGCGC--------------------------
------------------
>chr5B_102
--------------------------------------------------------------------------------
---------------------ATCCAGAAATAAGAG--------------------------------------------
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--------------------------------------------AATGATGAATGTACAA----GCCTCCTCAGAGATCA
GCGATTCTGGACCTTCGGATCAAAACGCTTGATGA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GTTTTGGGCCGTTGGATCGAGAGGTGGGAG
GATCTGGACCGTCGGATCTGGATGAAACACTGCTGGAATGAATAGTAATGGCAACAGAATGTAAATACCATGCCCCCACC
AGGGCATTTCGGTCATTTCGCGTGGTGGGGGTATAAAAGGGTCGGCCGCTCCTGTGACGG--------------------
--------------------------------------------------------------------------AGACCT
AGCCGCCTCCTCCCTCGCTCGCTCTCGCAGTCGC----CTCCCTCCTTCCTCGCTCGCGCCTCTGCCCCG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CGCCTCCCCCGCGCCCAGCTCCTCCCGCCTCGCCGCCGCCTCCTCTCCCCTCCCGCGC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------GCCT-------------------------------CCTCTCCT
CCCATCCACATCGCCGCCGCC---ACCCACC-------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------GCCTCGAACGGCGCCGTTGGC--------------------
--------------------------------------------------------------------------------
------------GGCCAGATCCGCCGCAGCAGA-----------------------------------------------
--------------------------------------GCCCT----------------------AGCAGAGGAGGGAGG
ACGAGGAGCATGACGGCGG-------------------------------------------------------------
------------------
>chr7B_986
--------------------------------------------------------------------------------
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-------------------------GCAACCCCAGTCTGAATGAATTCCGTCTTTCTGGGTCACGCAGGGGGTAAGGCAT
CAAGATGCGGTGAGGAAGCACAACTTGGTTCTGAATTCGGGTAGCGTCAACCCATTCTGAGGGGGGAGGCCGCCCTGCGA
TTCTCGACCAACAGGGAAAGCGTTGGTCTTTTCCAGACAA-AAAATGCAATCAACAACACATATGGCTGTTATTCTTTAT
GAGTTACTATGTGTTTAGTATTGTGGCATTCCTGGGAAGCTTACAAGTGCAGATATAGGGAAACTAGCTGCTTCTACTTC
AGTTTGATACATGTGTAATACGTACAACCTCAGTTTGATACATGTGTAATACGTACAACCTCCGTCCGAAAAAAGCTGGT
GCTAGATACATTCATTTGAGGGATAAGCTTGGGCAAGTTTTTTCGGACAGAGGGAGTACATGCTTAGGAATCCAACGTTA
GACGGGTAATGACTTGCAGTTGCATAGTGTCTGCTTGCGGGTGCATAGGATGACTTGCAAGGGTGGGTTTCCTGCCCCCA
GGGACCCGGACATGGT--TACCTTACTCTA-------AGAAGGGCTCAATTGCTTACG----------------TAGTTT
ATCATCTCAATTGTTGTACCGCTGACTAAATCTTATGCAGATGTTTGCTATTGTTTCTGTGCATGTAGCTGACTATGGTT
GCTCATAATGATTTCAGTTGCTTGAGAGGGCCCTTGAAGCGTCCGGAGATGATTTGGATGATGCAATAAAGAGTCTGAAG
GAGCTGCACCTCATGGAGTCAAATCAGGCTAACCT---------------------------------------------
----------------------------------------GTCGGCCGCTGGTTCCGCGTTTGAAAACGGGCCGACTGCA
GTCCAGCCATCTGTTGAAGGTATATCTTCCACCAAAAGCTGTTCCATTTCCAGGGCACATAGTGGTAATGGATAACATCG
TGCTTCCTCATGCATTTGTCCCCGTTGCAGTAACCACGCACACACACACAACAGTGCTGTAATATTATCTTCATATTCTA
GACATCTAGAAACCCTGCATGCTGCATTTACTTATGTTTTATTGTTACATTTCTACAAGGTCATGCGCTGTCATTTCAAA
ACAGAGAACATGTGCAGATCCATT--TG--T--CATATGAACTTATGGAGTATGCATGTCACTGTATGTGATTGTATGCC
CGTAGATTCAGATCACCGCACCCTCGGCCATTCTTACATGTTTTGCATTGATT-AGAATAACAGTT--CATCTCTCTATC
CAGTAGCACCAAACACTCAATTTCTTGCACTATTACATACCACATGACTGCTCTGCA-----------ACGATTAGTCGT
----------------------------TAATTTCATAAGCTTATCATCATATTGACAAGAGCAACAATGTTCCT-TATG
-------TTGGCAGGTATTGTTACCAGCGGCGGTGTGGACA-------------------------------CAGCTACT
GAACACCAACCTGCCGCAGCT---AGCCAGCAGCCAAGTAATAGTGGCCCTGAATGGGTTGATCTTTTTGTGAGGGAGAT
GTCAAATGCTTCTGACATGGACGA-TGCGCGGGCTCGTGCATCAAGAGCTCTGGAAGCCTTGACGAAGTCCATCCTGGAG
GGTGCAGGAGCTGAAGCAGCACAGAGCTTGCATCAGGTAGCCGCTAAATAAATGTCTCGAGGATGAAATGGCCTTGGGAT
TATAATTAGAAAATAGTGATGCCTGACAAGATCCTGTTTTCTT-TTTATTGGCAAAACAGGAAAACATGATGCTCAAGGA
GCAGATGACGGCCGTCCTGTCGCAGAACGCGGTCCTGAA-----------------------------------------
--------------------------------------------------------------------------------
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>chr7D_1280
--------------------------------------------------------------------------------
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-------------T------------------------------------------------------------------
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-----GTAGTGAC------TTGCATAGTGTCTGCTTGCGGGTGCAAAGGAGGACTTGCAG----GGGTTTCCTGCCCCCA
GGGACCCTGACATGGA--TACCCTCCTCTTAGAATCCTGATGGGCTCAATCTCTTCTGTACTTTATGAGCTCGATAGTTT
ATGGTCTTGATCGCTGTACCACTGACTAAATG---CGCAGATGTTTGCTATTGTTTATGTTCATATAGCTGACTATGGTT
GCTCATAATGATTTCAGCTGCTTGAGAGAGCCCTTGAAGCGTCTGGAGATGATTTGGATGATGCAATAAAGAGTCTGAAG
GAGCTGCACCTGATGGAGTCAAATCAGGCTAACCT---------------------------------------------
----------------------------------------GTCGGCCACTGGTTCCGCATTTGAAAACGGGCCGACTGCA
GTTCAGCCGTCTGTTGAAGGTTCATTTTCCACTAAAAGCTATTTCATTTCTACGGCACATAGTAGTAATGCATATTATCG
TGCTTCCTCATGCATTTGCCCCAGTTGAAA----------------CCAAACAGTGCAGTAATGTTATGTTCGTATTTTA
TATATCTAGAAACCCTGCAGGTTGCACTTGCTTATGTTTTATTGTTA----TCTACAAGGTCATGTGGTGTCAATTCAAA
ACAGATAACATGTGTGGATCCATTTGTG--T--CATATAAACTTATGGAGTATGCATGTCACT--ATGTGATTCTCTACC
CGTAGATTCAGATCGCCACACCCTCGGCCACTCTTATATGCTTTGCATTGATTTAGAATAACAATTCACATCTGTCTATC
CAGTAGCACCAAGCACT--ATTTCTTGCATTATTACATACCACATGACTGACTG--------------------------
-----ACTTATTTTCTACCACATCTTGCTAATTTCATAAACTTCGAATCATATTGACAAGAGCAACGAATTTTCC-TTTG
TTGGCACTTGGCAGGCATTGTTACCAGCGGCGGTGTGGACA-------------------------------CAGCTACT
GAACACCAACCTCCTGCAGAT---GGCCAACAGCCAGGTAATAGTGGCCCTGAATGGGTTGATCTTTTTGTGAGGGAGAT
GTCAAATGCTTCTGACATGGATGA-CGCGCGGGCCCGTGCGTCAAGAGCTCTTGAAGCCTTGACGAAGTCCATCCTGGAG
GGTGCAGGAGCTGAAGCAGCGCAGAGCTTGCATCAGGTACCCACCAAATATGTCT---GAGGAATAAATAGCCTTCAGAT
TATAAGGAGGGAATTGCAATGCCTGACAAGATCCTGTTTTTTTCTTTCTTGGCAAAACAGGAAAACATGATGCTCAAGGA
GCAGATGACGGCCGTCCTGTCGCAGAACGCGGTCCTGAA-----------------------------------------
--------------------------------------------------------------------------------
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------------------
>chr7A_1281
--------------------------------------------------------------------------------
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-----GTAATTAC------TCGCGTATTGTGCGCTTGCGTGTGCTAAGGATGACTTGCAG----GGGTTTCCTGCCCCCA
GGGACCCTGACCTGGTTTTACCCTCCTCTTAGAATCCTGATGGGGTCAATTGCTTCTGTAGTTTATGAGCTCAATAGTTT
ATGGTCTCAATCGCTGTACCACTGACTAAATG---TGCAGATGTTTGCTATTGTTTATGTTCATATAGCTGACTATGGTT
TCTCATAATGATTTCAGCTGCTTGAGAGAGCCCTTGAAGCGTCTGGAGATGATTTGGATGATGCAATAAAGAGTTTGAAG
GAGCTGCACCTCATGGAGTCAAATCAGGCTAACCTGCCA-----------------------------------------
--------------------------------------------GCCACTGGATCCACATTTGAAAACGGGCTAACAGCA
GTTCAGCCATCTGTTGAAGGTTCATTTTCCTCTAAAAGCTATTCCATTCCTAGGGTACATAGTAGTAACA----------
TGCTTCCTCATGCATTTGTCCTAGTTGTACTAAC----AACACACTCCAAACACTGCAATATTATTATCTTCGTATGATA
TATAT--AGAATCTCTGCAGGTTGCATTTACTTCTATTTTGTTGTTATATTTCTACAATGCCATGTGCTGTCAAATCAGA
ACAGAGAACATGTGTGGATCCATT--TG--TGTCATAAGAACTTCTGGAGTATGCATGTCACTGTATGTGATTGTCTACC
CATATATTCAGATCACCGCACCCTTGCCCACTCTTATATGTTTCGCATTGAGT-AGAATAGCAATT--CATCTGTCTATC
CAGTAGCACCAAGCACTCGATTTCTTGCACTATTGCATACTACATGACTGCTCTGTATTGAACATCATATGAGTAGTCGT
ATCTCAC-TATTTCCTAGCACATTTTGTTAATTTCATGAACTTAGAATCATATTAACAAGAACAACAAATTTTGCATATG
-------TTGGCAGGCATTGTTACCAGCGGCGGTGTGGACA-------------------------------CAGCTACT
GAACACCAACCTGCTGCAGAT---GGCCAACAGCCAAGTAATAGTGGCCCTGAATGGGTTGATCTTTTTGTGAGGGAGAT
GTCAAATGCTTCTGACATGGATGA-CGCGCGGGCCCGTGCGTCAAGAGCTCTTGAAGCCTTAACGAAGTCCATCCTGGAG
GGTGCAGGAGCTGAAGCAGCGCAGAGCTTGCATCAGGTACCCACCAAATATGTCTTGAGGA-AATAAATAGCCTTAGGAT
TACAAGGAGGGAATTGCAATGCCTGACAAGATCCTGTTTTTCCCTTTCTTGGCAAAACAGGAAAACATGATGCTCAAGGA
GCAGATGACAGCCGTCCTGTCGCAGAACGCGGTCCTGAA-----------------------------------------
--------------------------------------------------------------------------------
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------------------
>chr7D_2552
--------------------------------------------------------------------------------
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-----TGACGGCCGTCCTGTCGCAGAACGTGGTCCTGAATTTGTTTATATATTTGTTAGATGTACGAGCAACAGAAGAAA
ATCTCCCCTTTGCTCATTGTTGGTGGTTCAGACTCGGGTCTTCGATGCAAATCGATCAAGTGCCCCCATCTTTAGTTATT
CTGTTTGGTGGTACGTGGATCTGCTGGTGCACTGGTGAGCCACCCGTTCTACTCCACCTCCTCCTTTGATATTCAGTGCA
ATCCATGTGTTGCTTTGTGCTCAGTTGATGTGGAATGTGCTTAATGTTTCCCAGTAGAAAGCTTAGTATTGCTATGTGTT
GTTCAGCATTGGCTCATGGTAATAAATGGTTCCGGTTTAGGGCG-AATTTATCACTCA-----TTTTCTAGAGTGAGTTA
TAATCAATAATAATTGTTCCCTTTGTGAACGAGCTTATTGTTCTTTTTT-ATTTGCAGAATGGGGAGCTGATGAACCCGG
CGTCTTGACAGATATACCTCATCTTCCCGGCGGACAGCACCTTCCACGAGGATGACATCTCCAACTACTTCAGGTACATC
ACCGTGCTCGCTCACACACCACAGTCCTACCTCTGCTCTACGTCGAAGTCTCGCCGGGATTAACCGTGCTCGTCCTCTGA
ACCGCAGCATCTACGGTCATGTCCATGATGTGCGCATCCCCTACCAGCAGAACCACATGTTTGGGTTCGTCACCTTCGTC
TACAAGGAGAAGGGCAAGGTCCGCAGCAAGTTCAGGCAAGCCCACGGCAATCTTTGCCTCTTGCTTCCGGCAGCAGTAAC
----AACAACATCCTCATGACCATTTATTTTTGTTGTTGCTCT----------------------GCAGGAAGCAGAAGG
GCGTGAGGGTGGACTTCTCTAGCTGCGGGTCTCCCAACTATTGTATCTACTTGATTGCCTTCTGTTATCCAGATCGAAAT
TGTCCTAAGAATGAGGCA
>chr4D_2552
--------------------------------------------------------------------------------
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-----TGACGGCCGTGCTGTCGCAGAACGTGGTCCTGAATTTGTTTATATATTTGTTAGATGTACGAGCAACAGAAGAAA
ATCTACCCTCTGCTCATTGTTGGTGGTTCAGACTCGGGTCTTCGATGCAAATCAATCAAGCGCCCCCATCTTTAGTTATT
CTGTTTGGTGGTACGTGGATCTGCTGGTGCACTGGTGAGCCACCCGTTCTACTCCACCTCCTCCTTTGATATTCAGTGCA
ATCCATGTGTTGCTTTGTGCTCAGTTGATGTGGAATGTGCTTAATGTTTCCCAGTAGAAAGCTTAGTGTTGCTATGTATT
GTTCAGCATTGGCTCATGGTAATAAATGGTTCCGGTTTAGGGCG-AATTTATCACTCATTGTTTTTTCCAGAGTGAGTTA
TAATCAATAATACTTGTTCCCTTTGTGAGCGAGCTTATTGTTCTTTTTT-ATTTGTAGAATGGGGAGCTGATGAACCCGG
CGTCTCGACAGATATACCTCATCTTCCCGGCGGACAGCACCTTCCACGAGGATGACATCTCCAACTACTTCAGGTACATC
ACCGTGCTTGCTCACACACCACAGTCCTACCTCTGCTCTGCCTCGAAGTCTCGCCGGGATTAACCGTGCTCGTCCTCTGA
ACCGCAGCATCTGCGGTCCTGTCCACGATGTGCGCATCCCCTACCAGCAGAACCACATGTTTGGGTTCGTCACCTTCGTC
TACAAGGAGAAGGGCAAGGTCCGCAGCAAGTTCAGGCAAGCCCACGGCAATCTTTGCCTCTTGCTTCCGGCAGCAGTAAC
----AGCAACATCCCCATGACCATTTATTTTTGTTGTTGCTCT----------------------GCAGGAAGCATAAGG
GCGAGAGGGTGGACTTCTCTAGCTGCGGGTCTCCCAACTATTGTATCTACTTGATTGCCTTCTGTTATCCAGATCGAAAT
TGTCCTAAGAATGAGGCA
>chr5D_2552
--------------------------------------------------------------------------------
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-----TGACGGCCGTCCTGTCGCAGAACGTGGTCCTGAATTTGTTTATATATTTGTTAGATGTACGAGCAACAGAAGAAA
ATCTCCCCTCTGCTCATTGTTGGTGGTTCAGACTCGGGTCTTCGATGCAAATCGATCAAGTGCCCCCATCTTTAGTTATT
CTGTTTGGTGGTACGTGGATCTGCTGGTGCACTGGTGAGCCACCCGCTCTACTCCACCTTCTCCTTTGATATTCAGTGCA
ATCCATGTGTTGCTTTGTGCTCAGTTGATGTGGAATGTGCTTAATGTTTCCCAGTAGAAAGCTTAGTATTGCTATGTGTT
GTTCAGCATTGGCTCATGGTAGTAAATGGTTCCGATTTAGGGAG-AATTTATCACTCATTGTTTTTTCCAGAGTGAGTTA
TAATCAATAATAATTGTTCCCTTTGTGAGCGAGCTTATTGTTCTTTTTT-ATTTGCAGAATGGGGAGCTGATGAACCCGG
CGTCTCGACAGATATACCTCATCTTCCCAGTGGACAGCACCTTCCACGAGGATGACATCTCCAACTACTTCAGGTACATC
CCCGTGCTCGCTCACACACCACAGTCCTACCTCTGCTCTGCCTCGAAGTCTCGCCGGGATTAACCGTGCTCGTCCTCTGA
ACCGCAGCATCTACGATCCTGTCCACGATGTGCGCATCCCCTACCAACAGAACCACATGTTTGGATTCGTCACCTTCGTC
TACAAGGAGAAGGGCAAGGTCCGCAACAAGTTCAGGCAAGCCCACGGCAATCTTTGCCTCTTGCTTCCGGCAGCAGTAAC
----ATCAACATCCCCATGATCATTTATTTTTGTTGTTGCTCT----------------------GTAGGAAGCAGAAGG
GCGAGAGGGTGGACTTCTCTAGCTGCGGGTCTCCCAACTATTGTATCTACTTGATTGCCTTCTGTTATCCAGATCGAAAT
TGTCCTAAGAATGAGGCA
>chr3D_2721
--------------------------------------------------------------------------------
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-----------------------GTTGATGTGGAATGTGCTTAATGTTTCCCAGTAGAAAGCTCAGTATGGCCATGTGTT
GTTCAGCACTGGCTCATGATAAT-----GTTCCTGTTTAGGAACAAATTTATCACTCATTG-TTTTTCCAGAGTGAGTTA
TAATCAATAATAATTGTTCCTTTTGTGAGTGAGCTTATTGTTCTTTTTTTATTTGCATAATGGGGAGCTAATAAACCCGG
GGTCCCGGCAGATATACCTCATCTTCACGGCGGACGGCACCTTCCGCGAGGAGGACGACTCCAACTATTTCAGGTACATC
ACCATGCTCACTCGCACACCACAGTCATAATTCAGCTCTGCCTCGAAGTCTCGCTGGGATTAATCGTGCTTGTCCTCTGA
AGCGCATTATCTACAGTCATGTCCACGACGTGCACATCCCCTACCAGCAGAACGACATGTTCGGGTTCGTCACCTTCGTC
TACAAGAAGAAGGGCAAGGTCCCCGGCAAGTTCAGGCAAGCCCACGGTGATCTTTGCCTCTTACTTCCGGCAGCAGTAAC
TAACAGCAACATCCCCATGACCATTTACTTTTGCTTTTGCTCT----------------------GCAGGAAGCTGAAGG
GCGAGAGGGTGGACTTCTCTAGCTGGGGGTCTCCCA--------------------------------------------
------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS--------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS-----------------------S---S-----------S---------------
-SS--------S-----S-----------------------S---------S--S---------------S-------SS
----S------S-------S-S------S---SS------S----------SSS------S----S-----S--------
--S-SSS-----------------------------------S--S---------S-----------------------S
S-----------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S---S------------------------------
---------------------------------------------------S----------------------------
-----------SS-----------------S------S----------S---S---------------------------
-----S---S-----------------------------S--S----S--------------------------------
--S-------------------------S---------------------------------------------------
----------------------------------------S---S-------------S--------S------------
--------------------------------------------S----------------S-------SSSS-----S-
---------S-----------------------------------------S----------------S-----------
-------------------------------S------------S-----------------------------------
------------S---------------SS---------------------------------S----------------
------S---------------------------------------S-----------S---------------------
------------------------------------------------------S-------------------------
-------------------S------------------------------------------------------------
---SS-----------S-------------S-------------------------------------------------
---------------S--------------------S--------------S-------S--------------S-----
--------------------SSS-S---S-SS---S----S---------S-------------------S--S------
-------------------------------S-----------------------------S-S---------S------
-----------------------------------S--------------------S------------S----------
----S-----------------S------S----------------------------------------S---------
----------S-----------------S-----------S---------------------------------------
--------------------------------------------------------------------------------
-------------------------S---S--------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S------------------S------------
---SS--------------S-------------------------------------------------S----------
--------------------------------------S--------------------------S--------------
-S--S---------------------------------------------------------------------------
----------------------------------------------S-----------------------S------S--
----------------------------------S---------------------------------------------
------S--------------S-----------------------------------S----------------------
------------------
>forward_974
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GCAATG
CTGATGCGTAAGGG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_2511
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------AGGTGTGGACACAGCTACTG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_1058
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AT
CCCGATGCGGTAAGGAAC--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_2971
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CGCTCATTGTTGGTGGTTGA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
