>input_sequence_52458
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----------------------------------------------------------------------------ATGG
TGCAGCGTCTGACCTACCGGAAGAGGCACAGCTATGCCACCAAGTCCAACCAGACGCGGGTCGTCAAGACCCCAGGTCTG
GATCCCCTCCCCCT---CTTTTCTGGACGATTTTCTCCCATAATTTGGTGGCTTCTGATTTGTTCGTGCCAAGATCTTCG
CTGAAATCGGTCGGTTTTGTTCCTTGTGTACCGCAGGTGGTAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGC
CCCAAGTGCCCTGTGACCGGGAAGAAGATCCAGGGGGTGAGTTGCCGCGTGGC--TTTGCATCTCTATGAAAATTCTTGA
TTGTTTCGCTTTGTCATGATAGCAGTATTCGATATCTCAGTTTGTATGGTGGATGAGTTGGATTCTTGTGTCTGTATGAT
TATGTGCCGC--TAAATGTGGATTATCTCCATCTTACGCATGGAT--GGCTATCAACTTTTAGAGTATCTTTTAGGCCTT
TACCACGCAGATTACCGACTTGATTGGGGTGGGATGCACAATTAGTAGATGCCGATTTGACCGTATCGTCAATCTGATTG
ATATTTAGACCGTTTCCTTGTATCATTCCTAAGAAGTTATTCCTTTTGGTGGTTTGCATCAGTGCATGAGTATCAAATTT
GGAGTTGGTTGTCCGACAGTTGGTATGATGGTGTACGTGGACAGCTGGTTGTGCAGAGTAGCAATGCTGCATTTCAACAA
TATTTCAATCGTAGTATTTATTTTGGTGGTTCAATTATACTTATTTGTTTCTAGTGGTGCCTTTAGAC--TAATAAATTT
TTAGA-CAGTAATGTGTGTTCAAACACTAGGTTGCTCAGTTGTGTTGATTGTATTATGCGATCAGATTGGAAGCAATGCA
TTATATTACTACCAGCAAAGCAAACTCTCATGAAGGGAATTAATGTCACAGCTCTTTTGGTCCTTGTG--ACTTTTACAG
CTCTATTTGCTCACTCAGCTTGTTTTTATTAGTGAAATGAGATGCTTCTTCCATGCTTGTTGCAAGTTCGGAGGACATTT
TTGTGTTTGAATTCTGCCTTTCTATCTGTCTTTGGTTGATGAATATTGCAACCAGATGGCTCATGATCTGATGTTTCCAT
TTCCAGATTCCCCACCTCAGGCCTACTGAATACAAAAGATCAAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCCTA
TGGTGGAGTGCTCTCTGGAACTGCGGTGAGGGAAAGGTGAGCAAACTTTGCCTTACAACCATCTAATCTCATTAAAGCTC
AAACCTATCATTTATGTAGTCTCATTTGATTCGTGTTCTCCTTCAGGATCATCCGCGCTTTCTTGGTTGAGGAGCAGAAG
ATCGTGAAGAAGGTGTTGAAAATACAGAAGACCAAGGACAAGACGACCTCAAAGTAA-----------------------
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-------------------------------------------
>chr5B_1_TraesCS5B01G226600
ATTCGCAGCACAACACACAAATGGAGTCGTATATGCCGAATCTCCAGCGTGGCCACCATAGATCTGGAGCTTTACTTGTC
ATGGATCGAACACGCTAGGGTTAGGGTTACGCGGTGAGGCGATCTGGGGGAGAGAATGCGAGTGTGCGGGTCGAGCAAGA
GAATGAGAGAGATATAGCGAACCAATATGTTTGGGCCCACATGTAAGGACGGAGGGGCAAATATGTCAAAGCAACAACCA
GTCCGTGATTAAACAACCTTGACTGGATGGAAACGACACAAAAGGGCATCTCTATAAGTGAAATTGACGGCAAAGAGGTA
AATTTGAGCATGCTTCAAAATTAGGGGCAAATTTGAGTGATGGGTTTGAGTTAGGGACACACGTGTAAATGTCCTTACAT
TTTTTATGAC-AAAAAAGGTGTTTGTGTGTATGGTACTTTT--TTCATGTCAATGCCTCTTTTCCCATTCTATATATTTT
TTGCTGGTGTTGATCAACTCAGTGGCAAACTCAATCAAAAGTTTATTTTT-GGACATATGTAATTTTATTCATACTCACA
ACCATTACATGTACGTTGAGTTGAATCCAAGATTCAAAACTTTACA---------------AAGTAAGAATTACAATCAA
AATCTAAACC---ATAATGTTAGCTAGCCAAAATATTAGCCTTTTTT---AGGAGAGCCGAAATATTAGCGGAGCTATAA
AGCTTTTTCTTTCGACAGGGCCTTGCTATTTGCGTTCTTTGAATTTTTTTTAGCGAGGGCCTTGCTAT-TTGCGTGAGCC
TCCAGGCCGTT---------GACTGACAACATAAGCCTTCATAAGACAGCCCATACGGCCCAATCGAACGTCTGGCCCAT
TTACCCCATCAAGCAAATCCTAGCCGTCGGTGCTAGGTCACGGCGACGCGGGGAGGCCATTTATACCCGTCCCAGCCGCC
ACGCGCTCGCTCTCCTCTCTCTCTCCCCACTCTTTGCGCAAGCCCC-CTACTGCCGGCGGCGGAGACGACGGAAACATGG
TGCAGCGTCTGACCTACCGGAAGAGGCACAGCTATGCCACCAAGTCCAACCAGACGCGGGTCGTCAAGACCCCAGGTCTG
GATCCCCTCCCCCT---CTTTTCTGGACGATTTTCTCCCATAATTTGGTGGCTTCTGATTTGTTCGTGCCAAGATCTTCG
CTGAAATCGGTCGGTTTTGTTCCTTGTGTACCGCAGGTGGTAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGC
CCCAAGTGCCCTGTGACCGGGAAGAAGATCCAGGGGGTGAGTTGCCGCGTGGC--TTTGCATCTCTATGAAAATTCTTGA
TTGTTTCGCTTTGTCATGATAGCAGTATTCGATATCTCAGTTTGTATGGTGGATGAGTTGGATTCTTGTGTCTGTATGAT
TATGTGCCGC--TAAATGTGGATTATCTCCATCTTACGCATGGAT--GGCTATCAACTTTTAGAGTATCTTTTAGGCCTT
TACCACGCAGATTACCGACTTGATTGGGGTGGGATGCACAATTAGTAGATGCCGATTTGACCGTATCGTCAATCTGATTG
ATATTTAGACCGTTTCCTTGTATCATTCCTAAGAAGTTATTCCTTTTGGTGGTTTGCATCAGTGCATGAGTATCAAATTT
GGAGTTGGTTGTCCGACAGTTGGTATGATGGTGTACGTGGACAGCTGGTTGTGCAGAGTAGCAATGCTGCATTTCAACAA
TATTTCAATCGTAGTATTTATTTTGGTGGTTCAATTATACTTATTTGTTTCTAGTGGTGCCTTTAGAC--TAATAAATTT
TTAGA-CAGTAATGTGTGTTCAAACACTAGGTTGCTCAGTTGTGTTGATTGTATTATGCGATCAGATTGGAAGCAATGCA
TTATATTACTACCAGCAAAGCAAACTCTCATGAAGGGAATTAATGTCACAGCTCTTTTGGTCCTTGTG--ACTTTTACAG
CTCTATTTGCTCACTCAGCTTGTTTTTATTAGTGAAATGAGATGCTTCTTCCATGCTTGTTGCAAGTTCGGAGGACATTT
TTGTGTTTGAATTCTGCCTTTCTATCTGTCTTTGGTTGATGAATATTGCAACCAGATGGCTCATGATCTGATGTTTCCAT
TTCCAGATTCCCCACCTCAGGCCTACTGAATACAAAAGATCAAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCCTA
TGGTGGAGTGCTCTCTGGAACTGCGGTGAGGGAAAGGTGAGCAAACTTTGCCTTACAACCATCTAATCTCATTAAAGCTC
AAACCTATCATTTATGTAGTCTCATTTGATTCGTGTTCTCCTTCAGGATCATCCGCGCTTTCTTGGTTGAGGAGCAGAAG
ATCGTGAAGAAGGTGTTGAAAATACAGAAGACCAAGGACAAGACGACCTCAAAGTAATCTGTTTGAAACGGAAGTGCGAA
GTGAGATGGTGTTCTGTAAACAAGGAAAATATTTTTGTTGGTGGTTATGATCAATGGTTTAGTCCCTTCTAGCTAAATGT
TTTAGAGTACTTGAAATCCTTCTGCCGCCGTGACATCAGAGATTGTGAAACATTTGATACCCATTTGCAGTTTCATTTCT
GAATGCATGTTGAATCTACTTGTGTTAATTTGGTTTCACCTGGCATTCGTGGTTATTGATCTATAATAATCTTTGAGTTC
CTCACTCTCATGCCCTCGCTTCCCTGCTCCTTTGGAGCAGAAAAGTACACTTGAGAAACTTCACCCATTGCACCACTAGA
TTGTTTTACCATGCCTGTTA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------ATCTTCAAAGGAACATTTTTGTCTGCGAAGGCTGAAAGATTGTGGT
T-------------------------------------------------AATAGTGCATTTGTTTTAGGTTGATTATTG
TCCC------------GGGCTGGATTGGTAGAACATGCTGCTTGCTCTAC------------------------------
--------------------------------------------------------------------------------
CCTTCGGATTCCATGAAAGATAAAACACTTTGCGTGGAAAGTTATTCACGGAGTGCTTCCTTGCTTTTGGGT--TATAGC
TGGGCGCCATATCCCAGATTCACCACAATATGTAGGCGAGCAAAGGAGGCCTGGTTGCATCTTGCATGTTGGAAACGAAG
A----------------------------TAGGTGAGGGTCTATCACAATGGAGATTCTTTCAAAAATGAGTACAGCCTG
GCGGAGCATGAGTAATA---------------------------------------------------------------
------------------GCCACCAATTTTATCAGAGCAAATTTACCGAAGATGCCAGCCCAGAAGATTGACCATATGTG
GAAAAGACCCTGTCATGA-CTGTCAAGGTGAAC---------------------GAGACACATGCAGGTGCTACTGGGTG
A-----------------------TTTTGTAGGAGCAACAACTTGGTTCCTACCACATGTTATCACTGTCGATTCTACGG
AATTTATAGCAGTTCAGAATGGTA-----TGTTCTTGGCGGCTAACATGGGGTGCAACAGTATAGAGATCGAGTCTGACT
GTAGTTTTGCGGTGAACTCTGTGCAACTGATGGACGAGTACTT
>chr5A_1
ATTCGCAGCACATCACACAAATGGAGTCAGATACGCCAAATATCCACCACGGCCACCATAGATCTAGAGCTTTGCTTGTC
GTGGATCGAACGCGCTAGGGTTAGGGTTACCCAGCGAGGCGATCTGCGGGAGAGGATGCGAGCGTGCGGGTCGAGTGAGA
GAATGAGAGAGATATAGTGAATCGGTATGTTTGGGCCCACATGTAAGGACGGAGGGGCAAAAATGTCAAAGAAACGGCCA
GTTAGTGATCAAACAACCTTGACTGGACGAAAACGACACAAACGGGCATCTTTATAAGTGAAATTGATGGCAGAGAGACA
AATTTGAGCATGCTTTCAAATGGGGGGCAAATCTGAGTAGTGGGTTTGAGTTAGGAGCATACGTGTAAATGTCTCTACAT
-TTTTATGACAAAACATGGTGTTTGTGCTTATGGTTCTTTTTTTTCATGTCAATGGCTCTTTGCCCATTCTACATATTTT
TTGTCGGTGTTGATCAACTCAGTGGCAAACTCAATCAAAAGCTTTTTTGGGGGACATATGTAATTTTATTCATACTCACA
ACCATTACATGTACGTTGATTTGAATCAAAGATTCAAAAAATTACA---------------AAGTAAGAATTACAATCAA
AAT---AACC---ATAATGTTAGCTAGCCAAAATATTAGCCTTTTTTTTCAGGAGAGCCAATATAATAGCCGGC---TAA
AGTTTTTTCTTTCGACAGGGCCCTGCTATTTGCGTTCTTTGGTTTTTTCTTAGCGAGGGGGCCTTGCTATTGCGTGAGCC
TCTAGGCCGTTGACTAACTGGACTGGCAACATAAGCCTTCACAAGACAGCCCATACGGCCCAATTGAACGTCTGGCCCAT
TTACCCCATCAAGCAAATCCTAGCCGTCGGTGCTAGGTCACGGCGACGCGGGGAGGCCATTTATACCCGTCACAGCCGCC
ACGCGCTCGCCCTCCTCTCTCTCCCCCCACTCTTTGCCCAAGCCCC-CTACTGCCGGCGGCGGAGACGACGGAAACATGG
TGCAGCGCCTGACCTACCGGAAGAGGCACAGCTATGCCACCAAGTCCAACCAGACGCGGGTCGTCAAGACCCCAGGTCTG
GATCCCCTCCTCCCCCCCTTCTCCAGACGAATTTCTT--------TGGTGGCTTCTGATTTGTTCGTGCCAAGATCTTCG
CTGAAATCGGTCGGTTTTGTTCCTTGTGTGCCGCAGGTGGTAAGCTAGTGTACCAGTACACCAAGAAGAGGGCGAGCGGC
CCCAAGTGCCCTGTGACCGGGAAGAAGATCCAGGGGGTGAGTTGCCGCTTTGCCTTTTGCATCTATATG-AAATTCTTGA
TTGTTTCGCTTTGCCATGATATGGGTATTCGATATCTCTGTTTGTATGGTGGATGAATTGGATTCTTGTGCTTGGGTATT
ATTTATGTGTGGTAAATGTGGTTTATCTCCATCTTACACATGTAT--GGTTATCAGCTTTTAGAGTATCTTTTAGGCTTT
TACCGCACAAATTACCGACTAGATTGTGGTGAGATGCACAATTGGTAGATGCCGATTTGACCTTATCGGGCATCAGATTT
ATGTTTAGACCGTTTCCTCATATCATTCCTAATTAGTTATTCCTTTTGGTGGTTTGTGGTAGTGCATGGGTATCAAATTA
AGAGTTGGTTGTCCGACAGTTGGTACGATGGTGTACGTGGACAGCTGGTTGTGCAGAGTAGCAATGCTGCATTTCAACAA
TAGTTCA-----AGTATTTATTTTGATGGCTCAATCATTCTTATTAGTTTCTAGTGGTGCCTTTAGACTATAATAAATTT
TTAGATCAGTAATGTGTGTTTAAACACTTGGTTGCTCAGTAGTGTTGATTGTATTATACAATCAGATTGGTAGTTATGCA
TGAGTTTACTACCAGCAAAGCAAACTCTCATAACGGGAATGAATGTCACAGCTCATTTGGTCCTTTTGTGATTTCAACAA
CTCCATTTGCTCACTCAGCTTGTTTTTATTAGTGAAATGAGATTCTTCTGCCATGCTTGTTTTAAGTTGAGAGGACATTT
GTGTTTGAATTTTTGCCT------------TTTGGTTGAAGAATATTGCAACATGATGGCTCATGATCTGATACTTCCAT
TTCCAGATTCCCCACCTCAGGCCTACTGAATACAAAAGATCAAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCCTA
TGGTGGAGTGCTCTCTGGAACTGCAGTGAGGGAAAGGTGAGCAAACTTTGCCTTACAACCATCTAATGTCATTAC--CTC
AAACCTATCCTTTATGTAGTCTCATTGGATTCATGTTCTCCTTCAGGATCATCCGCGCTTTCTTGGTTGAGGAGCAGAAG
ATCGTGAAGAAGGTGTTGAAAATACAGAAGACCAAGGACAAGACGACCTCAAAGTAATCTGTTTGAAACAGAAGTGCGAA
GTGCGATGGTGTTCTGTAAACAAGGAAAATATTTTTGTTGGTGGTTATGATCAATGGTTTAGTCCCTTCTAGCTAAATGT
TTTAGAGTACTTGAAATCCTTCTGCCGCCGTGACATCAGAGATTGTGAAACATTTGATACCCATTTGCAGTTTCATTTCT
GAATGCATGTTGAATCTACTTATGTTAATTTGGTTTCACCTTGCATTCGTGGTTATTGATCTATAACAATTTTTCTGTTC
CTCACTCTCATTTCCTTGCTGCCCTGCTCC-TTGGATCAGAAAAGTACACTTGAGAAACTCCATATTAGATACAGAGTTC
CATTCACTCAGGCTCCGTTCGGTGCAAAGGAATTTTAAAGGAAAACTTGCAGGAAAAAAAATGAAGGAAAGTTCTCCCAA
ACTGCGTTCGGTGTGCAGGAATGAGCTCCTCAAGATCCAAAGGGAAGTTGCTGTAGCCTCCAGTTTTACAGGAAAGAAAA
CATCGGGCGGAAGCACGAGGCAAAGTACAGGAAATCTTAGCTGGACCTGCATGCACCACCATTGCCTTGCTTTGTGTGAC
CCCACCACTGCCAGATGGACGCATCAACGAGTGGATGAGAAAATAGACCGACCATGCTTTGTACTAGTGGGACCTACAGA
TACCTTTGCCTTCCTTTGCTTTACCGAACACATCTTCTCAGCTTTCCTACAGACTTCTAATCTAGATGAAAAAATCTAGA
CGTTCCTCTGTTTTTCAGTTTCCCACAGTTTTCTTAACCTTTGCAGCGAACGGAGCCTCAATCCCCGCATTCTAATGAGA
TAGGCAAAACGTTTGGGCTTCTTTGATTCAAAGGATTTTCAAAGGAATTTTAAAGGATTCTAATCCTTAGGATTTTTTCC
TATGTGGGTTGTTTGATTCGTAGGATTGTAAACCGTAGGAATTTTTCCATAGGATTCATTTGCACTAGATTTCATAGGAA
ATTTACCATCCACTCACAAGATGACATGCCAATCCAATCCCACGTTTTTCCTATTCATGCAGTTGGAAAATCCTACGAAT
CAAAGAGTCCC-----------------------------------------TTAATAAACTGGAGACGAACATTTGGGG
CCTTTGGATTCCAGGAAAGATAAAGTACTTTGCGTGGAAAATTCTTCCTGGAGTGCTTCCTTGTTTTGGGGTTCTATAAC
TGGGCGCCATATCCTGGATGTTC---------------------------------------------------------
--------------------------------------------------------------------------------
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----TATAGCAATTGAGGATGGTA-----TGTTCTTGGCGGCTAACATGGGGTGCAACAGTATAGAGATCGAGTCTGGCT
GTAGTTTTGCAGTGAACTCTGTGCAACTGATGGACGAGTACTT
>chr5D_519
T-------------------------------------------------------------------------------
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------------------------------------------TTTTTTTTGGCACATCTGTAACTTTATTCATACTCGCA
ACCATTACATGCACGTTGATTTGAATCCAAGATTAAAAACATACAAAGTACTAACTCTTGGAACTAAGAATTACAATCAA
ACTTTAAACCATAATAATGTTAGCTCGCCAAAATATTAGCCG-----------------------------GGC---TAA
AGCGTTTTCTTTCGACAGGGCCTTGCTATTTGCGATCTTTGA--TTTTTTTAGCGAGGGCCTTGCTAT-TTGCGTGAGCC
TCTAGGCCGTTGACTAATTGGACTGACAACATAAGCCTTCATAAGACAGCCCATACGGCCCAATTGAATGTCTGGCCCAT
TTACCCCATCAAGCAAATCCTAGCCGTCGGTGCTAGGTCACGGCGACGCGGGGAGGCCATTTATACCCGTCCCAGCCGCC
ACGCGCTCGCCCTCCTCTCTCTCCCCCCACTCTTTGCCCAAGCCCCCCTACTGCCGGCGGCGGAGACGACGGAAACATGG
TGCAGCGTCTGACGTACCGGAAGAGGCACAGCTATGCCACCAAGTCCAACCAGACGCGGGTCGTCAAGACCCCAGGTCCG
GATCCCCTCCTCCTCCCCTTCCCCAGACGATTTTCTCGCATGCTTTGGTCGCTTCTGATTTGTTCGTGCCAAGATCTCCG
CTGAAATCTGTCGGTTTTGTTCCTTGTGTACTGCAGGTGGTAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGC
CCCAAGTGCCCTGTGACCGGGAAGAAGATCCAGGGGGTGAGTTGCCGCCAAGC--TTTGCATCTATATG-AAATTCTTGA
TTGTTTCGCTTTGCCATGATAGGGGTATTCGATATCTCTGTTTGTATGGTGGATGAGTTGGATTCTTTTGCTTGGGTATG
ATTTATGTGTGGTAAATGTGGTTTATCTCCATCTCACACATGTATATGGCTATCAACTTGTAGAGTGCCTTTAAGGCTTT
TACC---------------------------AGATGCACAATTAGCAGATGCCGATTTGACCTTATCGGGCATCAGATTT
ATGTTTAGACCGTTTCCTCATATCATTCCTGAGAAGTTATTCC-TTTGGGGGTTTGCGTTAGTGCATGAGTATCAAATTC
AGAGTTGGTTGTCCGACAGTTGGTATGATGGTGTACGTGGACAGCTGGTTGTGCAGAGTAGTACTGCTGCATTTCAACAA
AG-TTCAATTGTTGTATTTATTTTGATGGTTCAATCATTCCTATTTGTTTCTAGTG------------------------
---------------GTGTTTAAACACTTGGTTGCTCGGTTGTGTTGATTGTATTATACGATCAGATT--AAGCGATGCA
TGATTTTACTAGCAGCAAAGCAAACTCTCGTAACGGGAATGAATGTCACAGCTCATTTGGTTCTTCTGTGACTTCAACAC
CTCCATTTGCTCACTCAGCTTGTTTTTATTAGTGAAATGATATTCTTCTTCCATGCTTGTTTTA------GAGGACATTT
TTGTGTTTGAAATTTGCCTTTTTATTTGTCTTTGGTTGAAGAATATTTCAACCTGATGGCTCATGATCTGATACTTCCAT
TTCCAGATTCCCCACCTCAGGCCTACTGAATACAAAAGATCAAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCCTA
TGGTGGAGTGCTCTCTGGAACTGCAGTGAGGGAAAGGTGAGCAAACTTTGCCTTACAACCATCTAATCTCATTAC--CTC
AAACCTATCCTTTATGTAGTCTCATTTGATTCGCGTTCTCCTTCAGGATCATCCGCGCCTTCTTGGTGGAGGAGCAGAAG
ATCGTGAAGAAGGTGTTGAAAATACAGAAGACCAAGGACAAGACGACCTCAAAGTAATCTGATTGAAACGGAAGTGCGAA
GTGAGATGGTGTTCTGTAAACAAGGAAAATATTTTTGTTGGTGGTTATGATCAATGGTTTAGTCCCTTCTAGCTAAATGT
TTTAGAGTACTTGAAATCCTTCTGCTGCCGTGACATCAGAGATTGTGAAACATTTGATACCCATTTGCAGTTTCATTTCT
GAATGCATGTTGAATCTACTTATGTTAATTTGGTTTCACATAGCATTTGTGGTTATCTATCTATAACAATCATTGGGTTA
CTCCCGCTCATGCCCTTGTTGCCCTGCTCC-TT--AGCAGAAAAGT--ACTTGAGAAATTTAACCCTGTAAATTTCGGG-
--------------------------------------------------------------------------------
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------------------------------------------AGGAACAATTTTGTTTGTGAAGGCTGAAAGATTCTGGT
CGTTTTCAGATCTTTGGTATCAAGTTGGATATGTCCTGACAACAGGGGTGAATAGTGCATATGTTCTAGGATACTCTGGG
TCGATTATGCCCATTTGGGCTCGATTGGTGGAACATGCGGCTTTCTCTTGGCTGCTGTAATCTCTATGTCTGCAAATGCT
CTGCTTGGTAGCCTTCATGAAATTGGAGATCTTGCACAGGGCAGTGTTCATATGAACAAGGTGTGGAAGAACACTTGGGG
CCTTCGG-------------------------CGTGGAAAGTGGGGTTTTA--------------------------AGC
TGGGCGCCATATCCCAGATTCACCACAAAATGCCCGATCTGCTCGGTTGGTGTTTCTATCACAATGGAGATTCTTTCAAA
GATGAGTGCAACTTTGGATAACCTGCTCCTAGGTCAGGTTCTATCACAATGGAGATTCTTTCAAAGATGAGTGCAACTAG
GAGCAGGCTGTGGTTATCTGGTGGCGGCAAAGGCGACAATTTGTTAGTGGGGTGCATTCCAAACACCAGAAAAAACCGCT
CTATCAATTAAGGTACTGGCCACTAGCTTTATCAGAGCAAATTTGCCGAAGATGCCAACCCGGAAGATTGATCATATGTG
GAAAAGGCCATGTCATGATCTGTCAAGGTGAACTAAGATGCTTCATTTCATGCAGAGACACATACGGGTGCTACTGGTAT
AGTTATCCAAGATAATAAAGGTGGTTTTATAGCAGCAACAACCTGGTTCCTACCACATGTTAGCTCTGCCGATTCTGCGG
AATTGATAGCAATTGAGAATGGTACTGTATGTTCTTGGCGGCTAACATGGGGTGCAACAGTATAGAGATTGAGTCTGACT
GTAGTTTTGCTGTGGCCCCTCTGCAACTGATGGACGAGTAC--
>SNPs
------------S---------------SS---S---S---S----S-SS---------------S-------S------
S----------S------------------S-S-S-----------S-------S-------S------------SS---
-----------------S---S-SS------------------------------------S---------S---SS---
--SS-----S-----------------S-S------------S--------S---------------S----S----SS-
---------------SS----SS---------S-----SS---------------SS--S-------------SS-----
S-------------S-S----------SS------S-------------------S------S---------S-------
---SS------------------------------------S--S-----------------------------------
-------------------S--------------------S---------------------------------------
---S-------------------------------------------------------S-S---S----S-SSSSS---
------------------------------------------S-------------------------------------
--S-------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
----------S------------S-------------S------------------------------------------
--------------------------------------------------------------------------------
----------S---------S--SS------------S---SS-------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-S-------------S----S----------
-------------S--------SS--------------S-------------------------------SS--SS-SS-
SS-SSSSS-S-----------S---------------S----S----------------------------------S--
----S-S--S----------S-----S----S------------------------------S-----SSS---S----S
--S---------------SS-------------------------------------S-S-------------------S
S-------------------------------------------------------------------------------
--S------S---------------S---------S--S-----------------------------------------
--------------------S-------S----------------------------S----------------S-----
-S--S--------------------------S-S------S-------------S----------S--------SS---S
---S---------------------------------------S-----------------SS-----SS----------
-------------S-------S---S-------------S-------------S------------------SS------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------SSS---
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S-------------------S------------------------S--------S----
----------------S---S---------S-----------------------------------SS-SS--SS-SS-S
SSS-SSSS-SSSSS-S---S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------S------------------S----
------------------------------------------------------------------------S--SSSS-
--SS-----------------S-------S--------S---------S-------------------------------
--------------------------------------------------------------------------------
-------------S----------SS-----------------S---SS--------------S---S------------
----------------------------S---SSS-SSSSSSSS--SS-SSSSS-SSSSSSSSSSSSSSSSSSSSSS--S
S---------------------------------S---S--------------------------S------S--S-SS-
-S-S--SS--S-SSSSS---------------------------------------------------------------
-----------------------S-SS-----------------S------------S---S---------S--------
------S--S-----------------------------------------------------S-S-----------SSS
----------------------------S---S---------S-------------------S-S---S-------S---
-----------S--S-----------------------------------------------------------------
----------S--------------------------------
>forward_998
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------------------CTCTCTCCCCACTCTTTGCG------------------------------------------
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>reverse_2265
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------------------------GGTGAGGGAAAGGTGAGCAA------------------------------------
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-------------------------------------------
>forward_1589
--------------------------------------------------------------------------------
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-------------------------------------------------TGCCGATTTGACCGTATCGT-----------
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-------------------------------------------
>reverse_4064
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---------------------------------------------------------------GCAGGTGCTACTGGGTG
ATT-----------------------------------------------------------------------------
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-------------------------------------------
