>input_sequence_52448
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-------------------------------------------------------AACCACCGCACCACACCACCAAATC
ACACCAACCCCCCAAAACCTCCCCGCATCTCGCGCCTCTCC---GCCGCCGCCGCCGCCGCCGAGGACACCGAGCTTCTC
CCCCGCCCGATCGCCATGGCCGCCCCGACGGCCTTCGCCGCCGCCAGGTTCCTCCCCTCCGCCCACCTCGACTCCTCCGC
GCGACTCGCCCCGCTCCGCGCCGCCCCGACCTCCAACCTCGCCTTCTCCCCGCTGCCGGCTTCCTCCTCCTCCGCGCTCG
TCGCCCTCCGCTCCGCCTCCCCATCCCCGTTCCCGTCCGGGCCGGGAGGGAAGCTGCCCCCACCCCCGCCCCCGCGCTCC
TATGGCGGCGGCGGCGGCGGCGGATCTGGCGACGCGGCGGACTCCGGGGGCGCCGGAGACGGTGCCGGCGGCCGCGCAGG
CATCCTCGGCATGTTCCTCGCCGGGTGGGCGGCCCGCGTCGCCGCGGATCCCCAGTTCCCGTTCAAGGTGCTCATGGAGG
AGCTGGTCGGCGTCACCGCCTGCGTGCTCGGCGACATGTCGTCGCGCCCCAACTTCGGCCTCAACGAGCTCGACTTCGTC
TTCTCCACCCTCGTCGTCGGATCCATCCTCAACTTCGTGCTCATGTACATGCTCGCCCCCACCGCCGGGGTCTCCGCCGC
AGCGGCC------------GCCGCCGTCTCCTCCCTCCCCAGCCACATGTTCGAGCCGGGTCCTTACTCGCTGGGCTCCC
GCGTCGCGACCCTCGTGTCCAAGGGCACCACGTTCGCGGTGGTGGGGTTCGGCGCCGGGCTCATGGGCACCGCCATCTCA
AACGGGCTCATCGCCTTGAGGAAGCGCATGGACCCGGCCTTCGAGACCCCAAACAAGGCGCCGCCCACGCTGCTCAACGC
CGGCACCTGGGCTCTCCACATGGGCATCAGCAGCAACCTGCGGTACCAGACCCTTAATGGGGTTGAGTTCCTTCTTGGCA
ATGTCATGCCACCCCCGGTCTTCAAGGTGTCTGTGATTGCTCTACGATGCATGAACAACGTGCTTGGTGGAATGTCCTTC
GTGTTGCTCGCAAGGCTCACCGGTGCGCAGAAATCAGATAAGCCGGCATCTTCTGATTCAGAAGCCAAGGAGAGATTGAT
AGCCGAGGGCGATGCCATTGCTGCTAATGTTAGCAGTGAGGACAAGTGATTTGGGTATAGTAGAGGGTAAGTAGGTCGGG
GCATGCTTTGCTTGCGCTGTGCATCGCCCTAGCCTCATTTGCTTGGACACAGGCCAAGAAACTTGTAGATGGTAAGTCGG
TCGGTTGGTTGGTAATAATGAGTGAGGCTTGAAATATTTTGTTCAGTCGGTTCGTGGTGATCTGGTGTTATGAGATGGCT
TGCTTAGACGATCTTAGAATAAAGTTTTATCATTCTC-------------------------------------------
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>chr3A_1_TraesCS3A01G337100
TCCTATGTAATTGAAATTTCAAAAAATAATTATATTTAAAAATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGTTGTCCCATTCTTCTCTAATACTCCTACCTCGGTTCCGAATTATTTATCTTAAATTTA
TCCAGATACAGATGTATTTAGACATGTTTCGTCCCGAATCACCTCTCTTAAATTTATATAGATACAAATGAACCTAGACA
CGTAGGGAAGTACGTATATGATACTCCCTCCGTTCCGAATTACTTGTCTTGGATTTGTCTAGATACGGATGTATCTACAC
TCATCTTAGTGCTAGATACCTCCGTATCTAGACAAATCTAAGAAAAGTAATTCGGAACGAAGGGAGTACGTACTAGTGCA
TATTATTCTAGAAAAAAAAAACTTGGACCGTTCCAATCACGCAAGAGTGTGAATCAAACGAAAACTCATGCAAAATTT--
--TCAGAGCTTGGAGGAGCTCCAACGAATTTTCAGAGGAAGCAAACAAAGCGAAGA----------GG-AGGTGAGGTCC
ACAGCCGGCTGTGCGCTGCGACAATCAAACGTCAATATTTTCCCCCACGAGCGGCGGCCCCGTCCGGTCCCGTAGGTCAG
GTGTCGCGCTGTCGCGGCACGTATACATATTGCGCCGCGCACCCACTCCCCACCCAACCACCGCACCACACCACCAAATC
ACACCAACCCCCCAAAACCTCCCCGCATCTCGCGCCTCTCC---GCCGCCGCCGCCGCCGCCGAGGACACCGAGCTTCTC
CCCCGCCCGATCGCCATGGCCGCCCCGACGGCCTTCGCCGCCGCCAGGTTCCTCCCCTCCGCCCACCTCGACTCCTCCGC
GCGACTCGCCCCGCTCCGCGCCGCCCCGACCTCCAACCTCGCCTTCTCCCCGCTGCCGGCTTCCTCCTCCTCCGCGCTCG
TCGCCCTCCGCTCCGCCTCCCCATCCCCGTTCCCGTCCGGGCCGGGAGGGAAGCTGCCCCCACCCCCGCCCCCGCGCTCC
TATGGCGGCGGCGGCGGCGGCGGATCTGGCGACGCGGCGGACTCCGGGGGCGCCGGAGACGGTGCCGGCGGCCGCGCAGG
CATCCTCGGCATGTTCCTCGCCGGGTGGGCGGCCCGCGTCGCCGCGGATCCCCAGTTCCCGTTCAAGGTGCTCATGGAGG
AGCTGGTCGGCGTCACCGCCTGCGTGCTCGGCGACATGTCGTCGCGCCCCAACTTCGGCCTCAACGAGCTCGACTTCGTC
TTCTCCACCCTCGTCGTCGGATCCATCCTCAACTTCGTGCTCATGTACATGCTCGCCCCCACCGCCGGGGTCTCCGCCGC
AGCGGCC------------GCCGCCGTCTCCTCCCTCCCCAGCCACATGTTCGAGCCGGGTCCTTACTCGCTGGGCTCCC
GCGTCGCGACCCTCGTGTCCAAGGGCACCACGTTCGCGGTGGTGGGGTTCGGCGCCGGGCTCATGGGCACCGCCATCTCA
AACGGGCTCATCGCCTTGAGGAAGCGCATGGACCCGGCCTTCGAGACCCCAAACAAGGCGCCGCCCACGCTGCTCAACGC
CGGCACCTGGGCTCTCCACATGGGCATCAGCAGCAACCTGCGGTACCAGACCCTTAATGGGGTTGAGTTCCTTCTTGGCA
ATGTCATGCCACCCCCGGTCTTCAAGGTGTCTGTGATTGCTCTACGATGCATGAACAACGTGCTTGGTGGAATGTCCTTC
GTGTTGCTCGCAAGGCTCACCGGTGCGCAGAAATCAGATAAGCCGGCATCTTCTGATTCAGAAGCCAAGGAGAGATTGAT
AGCCGAGGGCGATGCCATTGCTGCTAATGTTAGCAGTGAGGACAAGTGATTTGGGTATAGTAGAGGGTAAGTAGGTCGGG
GCATGCTTTGCTTGCGCTGTGCATCGCCCTAGCCTCATTTGCTTGGACACAGGCCAAGAAACTTGTAGATGGTAAGTCGG
TCGGTTGGTTGGTAATAATGAGTGAGGCTTGAAATATTTTGTTCAGTCGGTTCGTGGTGATCTGGTGTTATGAGATGGCT
TGCTTAGACGATCTTAGAATAAAGTTTTATCATTCTCTCGTGTGCTCATTTGGTCAAATATCCATCTGTAGT--------
----------TTTACT-TATTCAGTAGTTCATGTTGATTTGTCTGCTTGCATTTTTTGATATTAGCCAACTTTATAAGAT
GTGAGTATATACTGATATTTGATGACAAGATCTTTATGAGTTGAGTAAACTTATTGATGCAATGAGGCCACAGAGCCAAA
TCTAGCCACAGCAATGTGCCGAGATGATTTACTAAATTAAATTTCTGTATATGCTAGTGTCGTAACTTTGGACTAGTCTG
ACAGGTTACATTGTACTATCTCAGTATTCTTTTAAGCAATTTGCATTTCTCTTGGTAATCGGAAGGATGTATCAGTCTGG
TGGCAATGTGTTTGGAAGTTATAATTTCCTGCTTAGCTAGGATACTTGAGAATGATTGT--CTCGATCTGAAGTTTACAC
AGGATTTTGTA-GGGAGTATATGCATCGGCACTGTGTACTGGCTCATAATTTCTCCACAAGTTGTGCATCATGGCCTCC-
-CGGGTATGCACATTGACATTCCACGGTTGTAGTTTTAGTTCTTGTTGTCTGTCTGGCTTCTAAAAAGGAGTCATTATGT
TTGGGGAGCTAAATCTTGATCTTGAATGGTGACTAGTGTTTCAGATTTCAGAAGGCTAACCTTTCTGCTGACATGGTTCC
AAAACTCAAAATATCAATAGTTTGCACTGCTGCTTTTTTTGATGCTGTCGTTGTTGCACGGAAGCGTCGGAAGTATTGGC
TGGTCGTTCCTCTTGTAGACTGCTGCGTGGTTCGGGCTATGCACGAACAGCCAAGGGAAAGTTGCAGCAAGAGAGGAATA
TATGG-TGCGATTTTTCATGGTTGGAGCCGTTCGGGTCTCTAGACCT----------------------AGATCTTGTCC
CTCGGCGCATAGCTTCTCGACAAGTTTCTCATGAGGGTTTGAGTGTGACATGGTTGCTGGTGGACGGTGAGGTTCCAATT
GCTGTGCGCCGTGGTTGGTGAAGCAAGGTTTCCAATTGCTGCGC
>chr3B_724
TATTCGAG------------------------------------------------------------------------
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---------AGAAAAAAAAAGCTTGGACCGTTCCAATCACGCAAGAGTGTGAATCAAACAAAAGCCCAGGCAAAATTTAT
TTTCAGAGCTT---GGAGCTCCAATGAATTTTCAGAGGAAGCAAACAAAGTGAAATTCTTATTAGTTCAAGCTGAGGTCC
GCAGCCGGCACTGTGCGCTTTC---------------TTTTTCCCCACGAGCGGCGGCCCCGTCCGGTCCCGTAGGTCAG
GTGTCGCGCTGTCGCGGCACGTATACATATTGCGCCGCGCACCCACTCCCCACCGAACCACCGCACCGCACCACCACATC
ACACCAA-CCCCCAAAACCTCCCCGCATCTCGCGCCTCTCCCCCGCCGCCGCCGCCGCCGCCGAGGACACCGAGCGTCTC
CCT-GCCCGATCGCCATGGCCGCCCCGACGGCCTTCGCTGCCGCCAGGTTCCTCCCGTCCGCTCACCTCGACTCCTCCGC
GCGCCTCGCCCCGCTCCGGGCCGCCCCGACCTCAAACCTCGCCTTCTCGCCGCTGCCCG---CCTCCTCCTCCGCGCTCC
TCGCCCTCCGCTCAGCT------TCCCCGTCCCCGTCCGGGCCGGGAGGGAGGCTGCCCCCGCCCCCGCCCCCGCGCTCC
TACGGCGGCGGCGGCGGA---GGATCTGGCGACGCAGCGGACTCCGGGGGCGCCGGAGACGGCGCCGGCGGCCGCGCAGG
CATCCTCGGTATGTTCCTCGCCGGGTGGGCGGCCCGCGTGGCCGCGGATCCCCAGTTCCCGTTCAAGGTGCTCATGGAGG
AGCTGGTCGGCGTCACCGCCTGCGTGCTCGGCGACATGTCGTCGCGCCCCAACTTCGGCCTCAACGAGCTCGACTTCGTC
TTCTCCACCCTCGTCGTCGGATCCATCCTCAACTTCGTGCTCATGTACATGCTCGCCCCCACCGCCGGGGTCTCGGCCGC
AGCGGCG------------GCCGCCGTCTCCTCCCTCCCCAGCCACATGTTCGAGCCGGGTCCTTATTCGCTCGGCTCCC
GCTTTGCGACCCTTTTGTCCAAGGGCACTACGTTCGCGGTGGTGGGGTTCGGTGCCGGGCTCATGGGCACCGCCATCTCC
AACGGTCTCATCGCCATGAGGAAGCGCATGGACCCGGCCTTCGAGACCCCAAACAAGGCGCCTCCCACGCTGCTCAACGC
AGGCACCTGGGCGCTCCACATGGGCATCAGCAGCAACCTGCGATACCAGACCCTGAATGGGGTCGAGTTCCTTCTTGGCA
ATGTCATGCCACCCCCAGTCTTCAAGGTGGCTGTGATCGCACTTCGTTGCATGAACAACGTGCTTGGTGGGATGTCCTTT
GTGTTGCTCGCAAGGCTCACCGGTGCGCAGAAATCAGATAAGCCGGCATCTTCTGATTCAGAAGCCAAGGAGAGATTGAT
AGCTGAGGGCGATGCCATTGCCGCTAATGTTAGCACTGAGGACAAGTGATTTGGGTATAGTAGAGGGTAAGTAGGTCGGG
GCATGCTTTGCTTGCGCTGTGCATCGCCCTAGCCTCATTTACTTGGACACAGGCCAAGAAACTTGTAGATGGTAAGTCGG
TCGGTTGGTTGGTAATAATGAGTGAGGCTTGAAATATTTTGTTCAGTCGGTTTGTGGTGATCTAGTGTTATGAGATGGCT
TGCTTAGATGATCTTAAAATAAAGTTTTATCATTCTCCCGTGTGCTCATTTGGTCAATTATGCATCTGCAGT--------
----------CTTTACCTATTCGGTAGTTCATGTTGATCTGTCTGCTTACATTTTCTGATACTAACCAACTTTATAAGAT
GTGAGTATATACTGATATTTGATGACAAGATCTTTATGAGTTGGGTAAACTTATTGATGCAACAAG--------GCCAAA
TCCAGCCACAACAGTGTGCCGAGATGATCTGCTAAATTAAATTTCTGCATATGCTAGTGTCGTAACTTCGGACTAGTTCG
ACAGGTTACATTGTACTATCTTAGTATTCTTTTAAGCAATTTGCATTTCTCTTGGTAATCGAAAGGTTGTATCAGTCTGG
TGGCAATATATTTGGAAGTTATAATTCCCTGCGTAGCTAGGATACTTGAGAATGATTGT--CTTGATCTGAAGTTTTTAT
AGGATTTTCCTGGGGAGTATATGCGTCGACACTTTGTACTGGCTCATAATTTCCCCAGAAGTTGTTCATCATGGCCTCC-
-CAGGTATGCACATTGACATTCCACGGTTGTAATTTTAGTCATTGTGTCTGTCCGGGCTATA-------------TGT-T
TGGGGAAACCAAATCTTGATCTTTGGTGGTGACTAGTGTTTCAGATTTTAGAAGGCTAAACTTTCTGCTGACATCCTTCT
AAAATTCAAAATATCAATAGTTTGTACTGCTGCTCTTTTCGATGCTGTCGTTGTTGCG---------CGAAAGTATTGGC
TGGTCATGCCTCTTGTACATTGCCATGTGG--------ATGCACGAACAGGCATGGGAAAGTTGCAGCAATAGAGGAAGA
CATGCATGCGATTTTTCATGGTTAGAACCGTTTGGGACTCTAGACCTGGCAGAGTCGATTTTCCCCTTGAGATCTTGTCC
CTCGGCGCATAGCTTCTCGACAAGTTTCTCACGAGGGTTTGAGTGCGACATGGTTGTTGGTGGACGGTGAGGTTTCAATT
GCTGTGCGCCTTGGTTGGTGAAGCAAGG----------------
>chr3D_733
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------------AAAAAAAAACTCGGACCGTTCCAATCACGCAAGAGTGTGAATCAAACGAAAACTCAGGCAAAATTT--
--TCAGAGCTTGGAGG---TCCAACGAATTTTCAGAGGAAGCAAACAAAGCGAAATTCTTTGTTGGGG-AGCTGAGGTCC
GCAGCCGGCACTGTGCGCTTTC---------------TTTTTCCCCACGAGCGGCGGCCCCG-----TCCCGTAGGTCAG
GTGTCGCGCTGTCGCGGCACGTATACATATTGCGCCGCGCACCCACTCCCCACCGAACCACCGCACC--------ACATC
ACACCAA-CCCCCAAAACCTCCCCGCATCTGGCGCCTCT---CCCCCGCCGCCGCCGCCGCCGAGGACACCGAGCTTCTC
CCCCGCCTGATCGCCATGGCCGCCCCGACGGCCTTCGCCGCCGCCAAGTTCCTCCCCTCCGCCCACCTCGACTCCTCCGC
CCGCCTCGCGCCGCTCCGCGCCGCCCCGACCTCCAACCTCGCCTTCTCCCCGCTGCCCG---CCTCCTCCTCGGCACTCC
TCGCCCTCCGCTCAGCTTCCCCGTCCCCGTCCCCATCCGGGCCGGGAGGGAAGCTGCCCCCGCCCCCGCCCCCGCGCTCC
TACGGCGGCGG---CGGCGGCGGATCTGGCGACGCAGCGGACTCCGGGGGCGCCAGCGACGGCGCCGGCGGCCGCGCAGG
CATCCTCGGCATGTTCCTCGCCGGGTGGGCGGCCCGCGTCGCCGCGGATCCCCAGTTCCCGTTCAAGGTGCTCATGGAGG
AGCTGGTCGGCGTCACCGCCTGCGTGCTCGGCGACATGTCGTCCCGCCCCAACTTCGGCCTCAACGAGCTCGACTTCGTC
TTCTCCACCCTCGTTGTCGGATCCATCCTCAACTTCGTGCTCATGTACATGCTCGCTCCCACAGCCGGGGTCTCCGCCGC
CGCCTCTGCCGCCGCCTCTGCCGCCGTCTCCTCCCTCCCCAGCCACATGTTCGAGCCGGGTGCTTACTCGCTCGGCTCCC
GCGTCGCGACCCTCGTGTCCAAGGGCACCACGTTCGCGGTGGTGGGGTTCGGGGCCGGGCTCATGGGCACCGCGATCTCC
AACGGGCTCATCGCCTTGAGGAAGCGCATGGACCCGGCCTTCGAGACCCCCAACAAGGCGCCGCCCACGCTGCTCAACGC
AGGCACCTGGGCGCTCCACATGGGCATCAGCAGCAACCTGCGATACCAGACCCTGAATGGGGTCGAGTTCCTCCTTGGCA
ATGTCATGCCACCCCCGGTCTTCAAGGTGTCCGTGATCGCACTCCGTTGCATGAACAACGTGCTTGGTGGGATGTCCTTC
GTGTTGCTTGCAAGGCTCACTGGTGCGCAGAAATCAGATAAGCCGGCATCTTCTGATTCAGAAGCCAAGGAGAGATTGAT
AGCTGAGGGCGATGCCATTGCTGCTAATGTTAGCAGTGAGGACAAGTGATTTGGGTATAGTAGACGGTAAGTAGGTCGGG
GCATGCTT-GCTTGCGTTGTGCATCGCCCTAGCCTCCTTTGCTTGGACACAGGCCAAGAAACTTGTAGATGGTAAGTCGG
TCGGTTGGTTGGTAATAATGAGTGAGGCTTGAAATATTTTGTTCAGTCAGTTCATGGTGATTTGGTGTTATGAGATGGCT
TGCTTAGATGATCTTAGAATAAAGTTTTATCATTCTCCCGTGTGCTCATTTGGTCAATTATTCATCTGCAGTCTTTACTT
ATTCACAGTCTTTACT-TATTCAGTAGTTCATGTTGATCTGTTTGCTTGCATTTTCTGATACTAACCAACTTTATAAGAT
GTGAGTATATACTGATATTTGATGACAAGATGTTTATGAGTTGGGTAAACTTATTGATGCAATGAGGCCACAGAGCCAAA
TTTAGCCACAACAGTGTGCTGAGATGATCTACTAAATTAAATTTCTGTATATGCTAGTGTTGTAACTTTGGACTACTCCG
ACAGGTTACATTGTACTATCTCAGTATTCTTTTAAGCAATTTGCATTTCTTTTGGTAATCGAAAGGATGTATCAGTCTGG
TGGCAATGTGTTTGAAAGTTATAATTTCCTGCTTAGCTAGGATACTTGAGAATGATTGTATCTCGGTCTGAAGTTTCTAC
GGGATTTTCCTGGGGAGTATATGCGTCGGCACTGAGTAGTGGCTCATAATTTCCCCA---------CATCATGGCCATTT
TCATGTATGCACATTGACATTCCACGGTTGTAGTTTTAGTCCTTGTGTCTG----GGCTTCTAAAAAGGAGCCGTTGC-T
TGGGGGAACTAAATCTTGAT--------GTGATTAGTGTTTCAGATTTCAGAAGGCTAACCTTTCTGCTGACATTGTTTC
AAAATTCAAAATAGCAATAGTTTGCACTGCTGCTTTTTTCGATGCTGTCCTTGTTGCATGAAAGCTTCGGAAGTATTGGC
TGGTCGTGCCTCTTGTAGATTGCTGTGT--------------------AGGCGTGGGAAAGTTGCAACAAGAAAGGAATA
TATGG-TGCGATTTTTCATGGTTGGAGCCGTTCGGGTCTCTAGAGTCTAGACCT--------------------------
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>SNPs
-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS-----------------------------------------------------------S-----------
------------------------------------------------------SS---------------S--------
S--------SS--S--SSSSS-SSSSSSSSSSSSSSS----S--------------------------------------
------------------------------------------------------S------------S--------S---
-------S------------------------------------------------------------------------
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---S-----------------------------------------------------S-SSS-----------------S
-------------S--S-----S-------S------------------------------S------------------
--S--------------------------------S--------------------------S-----------------
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------S-----------------------------------------------------------------S-------
----------------------------------------------------S--------------------------S
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S-----------S-----------------------------S-----------S--------S----------------
-------------------------------------S--S--S--S-----------------------S---------
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---S----------------------------------------------------------------------------
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--------S----------------------------S-------------------S---S------S-----------
--------------------------------------S----------------S-----S--S---------------
-------------------------------------------S------------------------------------
----------S--S--------------S-------------------------------------------------S-
-------------------------------------------------------------S------------------
----------------------------------------------------------------------------SS--
--------SSS-------------S----------------------------S---S-------S--------------
--S-------------------------------------S-----SSSSSSS-S----------------S-S--S-S-
-S-----S---------------SSS------------------------------------------------S-----
----S----------------------------------S------------------S-S----S--------------
-------S-----------S-----S----SSSSSSSS------------S--S--------------------------
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-------------------------------S-------------S----------S-----------------S-----
----------S-----------------SSSSSSSSSSSSSSSS
>forward_528
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----------------------------TCGTCCCGAATCACCTCTCT--------------------------------
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>reverse_2044
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-------------------------------------------ACGATGCATGAACAACGTGC-----------------
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>forward_914
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--------------GCTGCGACAATCAAACGTCA----------------------------------------------
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>reverse_2938
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---------------------------------------------------------CAAGTTGTGCATCATGGCCT---
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