>input_sequence_52434
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--------------------------------------------------------ATGGCGAGCCTGAGCGTGCCTCCG
GTGCTCACGCCTCCGCGTGATGACGCCGTCGCTCTCCACAAGGCCTTCAAAGGTACACAGA------------GATGAAA
CGAACGATGA------ACTATTTCTTCCATCCTGTCTAGCAACAATCGATGTTTTCTGTG---TAACAGCCGGTGGTTTT
CTTGTATTG--TGCAGGGTTCGGCTGCGACAGCACGACGGTGACTAACATACTTGCTCACCGCGACTCGGCGCAGCGCGC
GCTCATCCTGCACGAGTACAAAGCCATATACCA-----------------------------------------------
-----------------------------------------TCAGGATCTCTACCATCGCCTAGCAACTGAACTGAGTGG
AAACCACAAGGCATGCAAAATGAACTAGA------TATTTCCATATC---------------------------------
---------------------------------TACACATCCTAGCTACGGATACATACATATCCTTCGTCTTAAAAGTT
AAAACTGAGTGG-----------------------------AGTAC----------------------------------
----------------------------------------------------TGCTCCCGAAACGAAC---CTGCATGGC
TGTGG---------TTGCAGAATGCTATGCTGCTTTGGGTCCTCGACCCCGTGGGGCGTGACGCGACCATACTGAACCAG
GCTCTCAACAGCGACATCACCGACCTGAGAGCCGCCACGGAGGTAATCTGCTCCAGGACGCCGTCGCAGCTGCAGATCAT
GAAGCAAACCTACCGCGCGAGGTTCGGTTGCTACCTCGAGCATGA-----------------------------------
------------------------CATCACCGA-----------------------------------------------
--------------------------ACGCACCTACGGTGATCATCAGAAGGTTAGTCTTTTGTTTCTTGTTTCCATCGT
CATCACATAATTGCC--TTTTCTTGATCTGTTTTG-CGCTTGAATCTATCGCCACTATTTGTCTAATTATTCGGGTGTTG
ATCAATGCAGCTTTTGCTTGCGTACCTGGGAGTCCGGCGCAACGAAGGCCCGGAAGTTGATCCTTCGGCGGTGACAGACG
ACGCGAGGGAGCTGTATCAAGCCGGCGAGAAGAGGGTGGGCACCGATGAGCGGGCCTTCATCCGCATCTTCAGCGAACGC
AGCTGGGCGCACATGGTGTCCGTGGCCAACGCTTACCAGCACATGTACGCCCGGTCCCTGGAGAAGGTGGTGTTTATCTC
CAACTT-GCTTGAAACTCCTCTCATCTTCCTTCCATGAGCAAATCAGGCCTCGAAACTAAATAAATAAAGGC----ATCG
ATGCTCACCGAATTTGCAGGCCGTGAAGAGTGAGACGACAGGGAACTTCCAGTTCGGGCTGCTGACCATCCTCAGGTGCG
CCGACACTCCGGCAAAGTACTTTGCCAAGGTCCTGCACAAGGCGATGAAAGGCCTGGGCACCAGCAACGCGGCGCTCACA
CGGGTGGCGGTGACGAGGACCGAGGTTGACATGAAGTACATCAAGGCAGAGTACCACAACAAGTACAAGGGGTCGCTGGC
TGAAGCTATCCACTCCGAGACGTCGGGGAACTACCGAACCTTCCTCCTCTCACTCGTCGGCTGGGACCGCTAA-------
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----------------------------------------------------------------------------
>chr1A_1_TraesCS1A01G073900
AAACGAGCCAGCTTCTCCACGAGCCAGCGCTAGCTAGCTTCTCGCGGGAGCCAGCGATCGTTCGGCTGTAGAAAACGCTT
TGCCGCCCCCTGTAGCAAGAAAAACGGTTCGTCGTGCCCTGTAGCGAAAGGAAAGTGCTTCAAGGAGGCACTTCGGGAGG
GCATTCCATGTAATATCCAGCAACTCCCACTTCTCGTTTTCCAGGAGCTGGGCGATCGTAGCTTCTGTTTTTTGCACTGC
GGGCCGAGCGGATTCCGGGAGCAGGCTTCTAGAAACTGCGGTGTTCGGCCAGCTCCTCGCCCGCTTCCGGAGAAGCGTGG
AGCCGGAGCACTTCCGAACACAGCCTAAGACTTTACTATTTTTATTATAGTGTGATATTTTTGGGGCCTAAGACTTTACT
ATTTTTATTATAGTGTGATATTTTTGGGGCATCACCGCATCACTGAACAACGCCAACAAATACGTGAAGAGATACTTGCG
ACCAGGTAGATATTTCTGTGATTTAAATTGCACACACCTACAGTACACTTATAAATTCCTTTTGTTGTTATGTTTTTGCA
CAACACATCTTTTCATGTTGTTTCTCATGTGGTAGTGTGGAAGATTACAAAGAGTTTACTAATGTCACCATGTCTAGCAG
TCGGTCGTGGGAGGAGGACATGTCTGGCAGTCGGTCATGGGAGGAGGAGAGGGAAGGGTCTTGAGCTATTGGGTTTAGGA
AGTATGGTTTTTTTCTTTTTCCGTTGCAACGCACAGGTATTTTGGCTAGTGGAAACTAATAAACGCAGACGGAGGTAGTA
GTGCTGTTTCAAAATATTCTGAATCAAAGAATGAGCGGGTTGTGCTTCTCATCCTTGTAATTTCCAAAGAGAAATCGAAT
CTAGCGTCTAAGGGGAAAGCTTCGCGTCTCCCTCTTTAAAAAGCTCCCCCC-GTACGCAGCAC-----------CAGCAC
ACAGAGTCTCACTCACAGAAAA----GAAACCATCGTCCAGCCACGCAGGCGAGCGATGGCGAGCCTGAGCGTGCCTCCG
GTGCTCACGCCTCCGCGTGATGACGCCGTCGCTCTCCACAAGGCCTTCAAAGGTACACAGA------------GATGAAA
CGAACGATGA------ACTATTTCTTCCATCCTGTCTAGCAACAATCGATGTTTTCTGTG---TAACAGCCGGTGGTTTT
CTTGTATTG--TGCAGGGTTCGGCTGCGACAGCACGACGGTGACTAACATACTTGCTCACCGCGACTCGGCGCAGCGCGC
GCTCATCCTGCACGAGTACAAAGCCATATACCA-----------------------------------------------
-----------------------------------------TCAGGATCTCTACCATCGCCTAGCAACTGAACTGAGTGG
AAACCACAAGGCATGCAAAATGAACTAGA------TATTTCCATATC---------------------------------
---------------------------------TACACATCCTAGCTACGGATACATACATATCCTTCGTCTTAAAAGTT
AAAACTGAGTGG-----------------------------AGTAC----------------------------------
----------------------------------------------------TGCTCCCGAAACGAAC---CTGCATGGC
TGTGG---------TTGCAGAATGCTATGCTGCTTTGGGTCCTCGACCCCGTGGGGCGTGACGCGACCATACTGAACCAG
GCTCTCAACAGCGACATCACCGACCTGAGAGCCGCCACGGAGGTAATCTGCTCCAGGACGCCGTCGCAGCTGCAGATCAT
GAAGCAAACCTACCGCGCGAGGTTCGGTTGCTACCTCGAGCATGA-----------------------------------
------------------------CATCACCGA-----------------------------------------------
--------------------------ACGCACCTACGGTGATCATCAGAAGGTTAGTCTTTTGTTTCTTGTTTCCATCGT
CATCACATAATTGCC--TTTTCTTGATCTGTTTTG-CGCTTGAATCTATCGCCACTATTTGTCTAATTATTCGGGTGTTG
ATCAATGCAGCTTTTGCTTGCGTACCTGGGAGTCCGGCGCAACGAAGGCCCGGAAGTTGATCCTTCGGCGGTGACAGACG
ACGCGAGGGAGCTGTATCAAGCCGGCGAGAAGAGGGTGGGCACCGATGAGCGGGCCTTCATCCGCATCTTCAGCGAACGC
AGCTGGGCGCACATGGTGTCCGTGGCCAACGCTTACCAGCACATGTACGCCCGGTCCCTGGAGAAGGTGGTGTTTATCTC
CAACTT-GCTTGAAACTCCTCTCATCTTCCTTCCATGAGCAAATCAGGCCTCGAAACTAAATAAATAAAGGC----ATCG
ATGCTCACCGAATTTGCAGGCCGTGAAGAGTGAGACGACAGGGAACTTCCAGTTCGGGCTGCTGACCATCCTCAGGTGCG
CCGACACTCCGGCAAAGTACTTTGCCAAGGTCCTGCACAAGGCGATGAAAGGCCTGGGCACCAGCAACGCGGCGCTCACA
CGGGTGGCGGTGACGAGGACCGAGGTTGACATGAAGTACATCAAGGCAGAGTACCACAACAAGTACAAGGGGTCGCTGGC
TGAAGCTATCCACTCCGAGACGTCGGGGAACTACCGAACCTTCCTCCTCTCACTCGTCGGCTGGGACCGCTAATTCGCTC
CTGT-----------CGATCCC-ACGCATGCATGGTGGCGCCACCAAGACTGCCATGTGTGATCCATCAATAGGCATTGG
GGCACAATAATCTGAAAAGGAGCAAAATAAGATTGTATTATTCCTGTGGAATCAACACAATTGTTCTATGTTCACTTTTC
CAAATATGGAGCATCAGTACCTTCACTATTTCCAAATAACTCGCCATCAACATGGTTCTTTTTACTATAGTAGTACCCCA
TCTTATACTGCTTTATTCCACCTTATCTCCCCCGTCTCGTCACATTTGGTCTATCACCAGATAAATGTAGTGGGAAGGTG
CCTGCTTGATTATTGTTAACTACCACTCCAGAAGGGAAAA----AAAAGGAACAATAGTTTGGCAACATATTCTACATGA
TTGGCCGACCACATCTCACCTTTCAC--AAAAAAGTAACAATAATTTGACAACATATTCCACACGACTGGCCGACCACAT
CTCGCCTTCCATAA------------------------------------------------------------------
------------------TACGGAAGCTCTATTACGATTCAACGAAACTTAATTAACATAATGTACGGAAAACTTCTCTC
TGCTTCCTCCGTTAGAAGTGAGCCTCCAAAATACCTGAAATGGACTAAAACAACCTGCTATCATAAATTACTGTCACACA
GATGATGCATTTAGGCTCTGTTCGGATTCTCTCCGGTCCCTCACTGCGGCTCCCGGAGCGGAGGGAGCGCCAGCACAAAA
GCAGGGAGTTGCTTGAAACCAGCTCTCGAGCGGAGCGGACTTTAAGGGATGGGAGAGTTTCCGAACAGGCACTTAGTACC
ACATAACATCCAGTCCATCTTAATTGCAGAA-------------------------------------------------
------------------------------ATACAGGTTATTGCTAACGAGTCCACTGGACACTTAGGAAGGCAAATAGG
CAAAGTAATAACCAGTATTAAAAGTAAGGATGCAACAACAGAGTCCAGGTTTCTGATCAAAATTCACAGGTAAGAG--TA
AATGGAGATAATCCAGCTGCAATGATGAATATTTTTT-ATCTACACTCCCAGTAAAG-------------------
>chr7A_1
AAACGAGCCAGCTTCTCCATGAGCCAGCGCTAGCTA--------------------------------------------
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-------------------------------------------------------------GCTTCTCGCGGGAGCCAGC
GATCGTTCGGCTGTAGAAAACGCTTTGCCGCCCCCTGTAGCGAGAAAAACGGTTCGCCGCGCCCAGTAGCGAGAGGAAAG
TGCTTCAAGGAGGCACTTCGGAGGGGCATTCCATGTAATATCCAGCAACTCTCAATTCTCGTTTTCCAGGAGCTGGGCG-
--------------------------------------------------------------------------------
--------------------------------------ATCGTAGCTTCTGTTTTTTGCATTGCG---------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GGC
CGAGCGGATTCCGGGAGCAGGCTTCTAGAAGCTGCGGCGTTCGGCCAGCT------------------------------
--------------------------------------------------------------------------------
------------CCTCGCCCGCTTCCGGAGAAGCGTGGAGCCGTAGCACTTCCGAACGCAGCCTAAGACTTTACTATTTT
TATTATAGTGTGATATTTTTGGGGCATCACCGCATCACTGAGCAATGCCAACAAATACGTGAAGAGATACTTGCGACCAG
GTAGATATTTCTGTGATTTAAATTGCACACACCTACAGTACACTT-----------------------------------
------ATAAATTCC--TTTTGTTGTTATGTTTTTGCACAA-------------------------CAC-------ATCT
TTTCATGTTGTTTCTCATGTGGTAGTGTGGAAGATTTCAAAGAGTTTAC-------------------------------
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--------------------------------TAGTGT---CACCATGTCTGTCA---GTCGGTCGTGGGAGGAGGAGGA
CATGTCTGGCAGTCGGTCATGGAAGGAGGA--------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GGAGAGGGAAGGGT
C---TTGAGCTATTGGGTTT------------------------------------------------------------
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---------------------AGGAAGTATGGTTTTT-TTCTTCTTCCATTGCAACGCACGGGCATTTTTGCTAGT
>chr1D_770
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-------------------------------------------------TGGAAACTAATAAACGCAGACGGAGGTAGTA
GTGCTGTTTCAAAATATTCTGAATCAAAGAATGAGCGGGTTGTGCCTCTCATCCTTGTAATTTTCAAAGAGAAATCGAAT
CTAGCGTCTACGGGGAAAGCTTCGCGTCTCCCTCTTTAAAAAGCTCCCCCC-GTACGCAGCAC-----------CAGTC-
------TCACTCTCACAGAAAG----GAAACCATCGTCCAGGCACGCAGGCGAGCGATGGCGAGCCTGAGCGTGCCTCCG
GTGCTCACGCCCCCGCGCGATGACGCCGTCGCTCTCCACAAGGCCTTCAAAGGTACAC--A------------GATGCAA
CGAACGATGA------ACTATTCCTTCCATCCTGTCTAGCAACAATCGATGTTGTCAGTG---TAACGGCCGGTGGTGGT
CTTGTATTG--TGCAGGTTTCGGCTGCGACAGCACGACGGTGACCAACATACTTGCTCACCGCGACTCGGCGCAGCGCGC
GCTCATCCTGCACGAGTACAAAGCCATGTACCA-----------------------------------------------
-----------------------------------------TCAGGATCTCTACCATCGCCTAGCAACCGAGCTGAGTGG
AAACCACAAGGCATGCAAAATGAACTACA------TTTTTTCATATT---------------------------------
---------------------------------TACACATCCTAGCTAGGGATATTCTGTCCA-----------------
AAAACTGAGTGG-----------------------------AGTAC----------------------------------
----------------------------------------------------TGCTCCCGAAACGAAC---CTGCTTGGC
TGTGG---------TAGCAGAATGCTATGCTGCTTTGGGTCCTCGACCCTGCTGGGCGTGATGCGACCATACTGAACCAA
GCTCTCAACGGCGACATCACCGACCTGAGAGCCGCCACCGAGGTTATCTGCTCCAGGACGCCGTCGCAGCTGCAGATCAT
GAAGCAAACCTACCGTGCGAGGTTCGGTTGCTACCTCGAGCATGA-----------------------------------
------------------------CATCACCGA-----------------------------------------------
--------------------------ACGCACCTATGGAGATCATCAGAAGGTTAA--TTTTGCTTCTTGTTTC---CAT
CATCACATACGTGCC--TTTTCTTGATCTGTTCTG-TGTTTGAATCTATCATCATTATTGTCTACTTTTTTCGTGTGTGG
ATCAATGCAGATTTTGCTTGCGTACCTGGGAGTCCCACGCAACGAAGGCCCGGAAGTTGATCCTTCGGCGGTGACAGACG
ACGCGAGGGAGCTGTATAGGGCCGGCGAGAAGAGGGTGGGCACCGATGAGCGGGCCTTCATCCGCATCTTCACCGAAAGC
AGCAGGGCACACCTGGTGTCCATCGCCAACGCTTACCAGCACATGTACGCCCGGTCCCTGGAGAAGGTGATGTTGGTCTC
CAACTT-TCTTGAAACTCCTCTCATCTTCCTTCCATGTGCAAATCAGGCCCAGAAAATAAATAAATAAATAAAGGTATTG
ATGCTCACCGAATTTGCAGACCCTGAAGAGTGAGACGACAGGGAACTTCCAATTCGGGCTGCTGACCATCCTCAGGTGCG
CCGACACTCCGGCAAAGTACTTTGCCAAGGTCCTGCACAAGGCGATGAAAGGCCTGGGCACCAGCAACGCGGCGCTCATA
AGGGTGGCGGTGACGAGGACCGAGGTCGACATGAAGTACATCAAGGCAGAGTACCACAACAAGTACAAGGGGTCGCTGGC
TGAAGCTATCCACTCCGAGACGTCAGGGAACTACCGAACCTTCCTCCTCTCGCTCGTCGGCCGGGACCGCTAAGGCGCTC
CAGTGCATGCTCAATCGATCCC-CCACATGGATGGTGG---CGCCAAGACTGCCA---GTGATCGATCAATAGGCATTGG
GGCACAATAATCTGAAAAGGAGCAAAATAAGATTGTATTATTCCTGTGGAATCAACACAATTGTTCTATGTTCACTTTTC
CAAATATGGAGCATCAGTACCTTCACTATTTCCAAACAACTCGCCATCAACATAGTTCTTTTTACTATAGTAGTACCCCA
TCTTACACTGCTTTATTCCGCCTTATCTCCCCCGTCTCGTCACATTTGGTCTATCACCAGATAAATGTAGTGGGAAGGTG
C---CTTGATTATTGTTAACTACCACTCCAGAAGGGAAAAGAAAAAAAGGAACAATAGTTTGGCAACATATTCTACATGA
TTGGCCGACCACATCTCGCCTTTCACG-AAAAAAGTAACAATAATTTGACAACATATTCCACACGACTGGCCGACCACAT
CTCGCCTTCCATAAAATTCCAGAGAGAAGTTTATTTCAACAGCCAAAGCTTGTAAATCACTCCTAAGTTTCAGGACTAGT
TAAGGTGCTTCTACGTTATACGGAAGCTCTATTATGATTCAACGAAACTTAATTAACATAATGTACGGAAAACTTCTCTC
TGCTTCCTCCGCTAGAAGTGAGCCTCCAAAATACCTGAAATGGAC----------------------------------A
GATGACGTGT----------------------------------------------------------------------
------------------------------------------------------------------------TTAGTACC
ACATAACATCCAGTCCATCTTAAATTACTGTTACACAGATGATGCGTTTAGTACAACATAACAACCTGCTGTTATAAATC
ACTGTTACAAAGATGATGGTACCAGATAACATAAAGGTTAATGCTAACGACTCCACTGCACAATTAGGGAGGCAAATAGG
CAAAGTAATAACCAGTATTAAAAGTAAGCATGCAACAACAGAGTCCAGGTTTCTGATCAAAATTGACAGGCAAGGGTATA
AATGGAGATAATCCAGCTGCAATGATGAATGTTTGTTCATCTACACTCCCAGTAAAG-------------------
>chr1B_857
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--------------------------------------------------------GTAATTTCCAAAGAGAACCCGAAT
CTAGCATCTGAGGGAAAAGCTTCGCGTCTCCCTCTTTAAAAAGCTCCCCCCCGTACGCAGCATCAGCACAGACACAGTC-
------TCACTCTCACAGAAAGAACGGAAACCATCGTCCAGGCAGGCGGTAGAGCGATGGCGAGCCTGAGCGTGCCTCCG
GTGCTCATGCCTCCGCGCGATGACGCCGTCGCTCTCCACAAGGCCTTCAAAGGTACGT--ACGTACACAGATAGATGCAA
CGAACGATGA------ACTGTTC---------------------------------------------------------
--------------------------------------------------------------------------------
---CATCCTGCACGAGTACAAAGCCATATACCA-----------------------------------------------
-----------------------------------------TCAGGATCTCTACCATCGCCTAGCAACCGAGCTGAGTGG
AAACCACAAGGCATGCAAAAAGAACCACAATACATTTTTTTCATATCTACTCCCTCCGTTAAGTCTTTGTAGAGATTCTC
TACAAAGACTTATATTTAGGAACGGAGAAAGTATACACATCCTAGCTATGGATACATACACATATTCTGCGTC-----TT
AAAACTGAGTGG-----------------------------AGTAC----------------------------------
----------------------------------------------------TGCTCCCAAAACGAAC---CTGCCTGGC
TGTGG---------CTGCAGAACGCTATGCTGCTTTGGGTCCTCGACCC-GTGGGGCGTGACACGACCATACTCAACCAG
GCCCTCAACGGCGACATCACCGACCTGACAGCCGCCACGGAGGTAATCTGCTCCAGGACGCCGTTGCAGCTGCAGATCAT
GAAGCAAACCTACCGCGCGAGGTTCGGTTGCTACCTTGAGCATGA-----------------------------------
------------------------CATCACCGA-----------------------------------------------
--------------------------ACGCACCTACGGTGATCATCAGAAGGTTAGTCTTTTGTTTGTTGTTTCCATCAT
CATCACATACGTGCC--TTTTCTTGATCTGTTTTTGCGTTTGAATCTACCGTCACTGTAACTC-AATTATTCGGATGCTG
ATCAATGCAGCTTTTGCTTGCGTACCTGGGAGTCCCGCGCAACGAAGGCCCGGAAGTTGATCCTTCGGCGGTGACAGACG
ACGCAAGGGACCTGTATCA------CGAGAAGAGGGCGGGCACCGATGAGCGGGCCTTCATCCGCATCTTCAGCGAACGC
ACCTGGGCGCACCTGGTGTCCGTGGCCAACGCTTACCAGCACATGTACGCCCGGTCCCTGGAGAAGGTGGTGTTTATCTC
CAACTT-GCTTGAAACTCCTCTCATCTTTCTTCCATGAGCAAATCAGACCTAGAAAATAAATAAATAAAGGC----ATTG
ATGCTCACCGAATTTGCAGGCCGTGAAGAGTGAGACGACAGGGAACTTCCAGTTCGGGCTGCTGACCATCCTCAGGTGCG
CCGACACTCCGGCGAAGTACTTTGCCAAGGTCCTACACAAGGCGATGAAAGGCCTGGGCACCAGCAACGCGGCGCTCATA
CGGGCGGCGGTGACGAGGACCGAGGTCGACATGAAGTACATCAAGGCAGAGTACCATAACAAGTACAAGGGGTCGCTGGC
TGAAGCCATCCACTCCGAGACGTCAGGGAACTACCGAACCTTCCTCCTCTCGCTCGTCGGCCGGGACTGCTAAGGCGCTC
CCGTGCATGCTCAATCGATCCCACCACATGCATGGTGG---CACCAAGGCTGCCATGCGTGATCGATCAATAGGCATTGG
GGCACAATAATCTGAAAAGGAGCAAAATAAGATTGTATTATTCCTGTGGAATCAACACAATTGTTCTATGTTCACTTTTC
CAAATATGGAGCATCAGTACCTTCACAATTTCGAAATAACTCGCCATCAACATGGTTCTTTTTACTATAGTAGTACCCCA
TCTTATACTGCTTTATTCCACCTTATCTCCCCCGTCTCGTCACATTTGATCTGTCACCAGATAAATGTAGTGGGAAGGTG
C---CTTGATTATTGTTAACTACCACTCCAAAAGGGAAAAGAAAAAAGGGAACAATAGTTTGGCAACATATTC-ACATGA
TTGGCCGACCACATCTCGCCTTTCAGAAAAAAAAGTAACAATAATTTGACAACATATTCCACACGACTGGCCGACCACAT
CTCGCCTTCCATAAAATTCCACGGAGAAGTTTTTTTCAACAGCCAAAGCTTGTAAATCACTCCTAAGTTTCAGGACTAGT
TAAGGTGCTTCTACATTATATGGAAGCTCTATTACGATTCAACAAAACTTAATTAACATAATGTACGGAAAACTTCTCTC
TGCTTCCTCCGTTAGATGTGAGTCTCCAAAATACCTGAAGTGGACTAAAACAACCTGCTATCATAAATTACTGTTAGGCA
GATGACGCGT----------------------------------------------------------------------
------------------------------------------------------------------------TTAGTACC
ACATAACATCCAGTCCATCTTAATTGCAGAA-------------------------------------------------
------------------------------ATACAGGTTAATGCTAACGAGTCGACTGGACACTTAGGAAGGCAAATAGG
TAAAGTAATAACCAGTGTTAAAAGTAAGCATGCAACAACAGAGTCCAGGTTTCTGATCAAAATTCACAGGCAAGAG--TA
AATGGAGATAATCCAGCTGCAATGATGAATGTTTTTT-ATCTACACTCCCAGTAAAG-------------------
>chr3A_991
CAGGCGAAGAA---------------------------------------------------------------------
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---------------------------------------------------------TGGCGAGCCTGAGCGTGCCTCCG
GTGCTCACGTCCCCGCGCCATGACGCCATCGCCCTCCACAGGGCCTTCAAAGGTGCGT---------------------A
CAAATAATGG------AGGACTCTTTTCATCCTGCCCAGCAACGATATGTGCTGCGTAACGGCTGACGGCCGGTGGTGTA
CGTGTTGGTATTGCAGGTTTTGGGTGCGACAGCACGACGGTGATCAACATCCTGGCGCACCGCGACGCGGTGCAGCGCGG
GCTCATCATGCAGGAGTACAGGGCCATATACCA-----------------------------------------------
-----------------------------------------CCAGGACCTCTACCATCGCCTATCGACCGAGCTCAGCGG
GAACCACAAGGCATGCAAACTGCAAAAT----------------------------------------------------
--------------------------------------------GAT------------TTATAAATCACCCAGCAAATA
TCATGCAAAATGATAAGTC----ACACAGACAGCATAGCATAGTATAGTATCCCTTTTCGAAAAAAGAAGAAGCATAGCA
TAGTATAGTATCCCTTTTCGAAAAAAGAAGAAGCATAGCATAGTACTGTATTTGCTCCCGAAATGACCTCTCTGCTTGGG
GGTGCCGGTTCCTTGTGCAGAAGGCGATGCTGCTGTGGGTGCTGGACCCCGTGGGCCGCGACGCCACGATACTGAACCAG
TCCCTCAACGGCGACATCGCCGACCTGCGCGCCGCCACGGAGGTGATCTGCTCCCGGACGCCGTCGCAGCTGCAGATCAT
GAAGCAGGCCTACCGCGCCCGCTTCGGCTGCTACCTCGAGCAGGA-----------------------------------
------------------------CGTCACCGA-----------------------------------------------
--------------------------GCGCACCTACGGCGACCACCAGAAGGTACGTCTTT--------GTTTGCCTCCA
CAGCACCATCGATACGCATACGCTCATCTGTGCAG-TGTTTGAACCTATCATCATTTTGTGTGTTGCTG-------GTGG
CTGGATGCAGCTTCTGCTGGCCTACCTGGGCATCCCGCGGTACGAGGGCCCGGAGGTGGACCCGTCGGCGGCGGCGCGCG
ACGCGAGGGAGCTCTACCGCGCCGGCGAGAAGCGGCTGGGCACCGACGAGCGGGCCTTCATCCGCGTCTTCACCGAGCGC
AGCTGGGCGCACCTCGCCGCCGTCGCCGACGCCTACCACCACCTCTACGCGCGCTCCCTGGACAAGGTGGCCTTCATCTC
CAGCTTTGCTTGAAACTCC-------------------------------------------------------------
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----------------------------------------------------------------------------
>chr3D_996
GAGG------A---------------------------------------------------------------------
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---------------------------------------------------------TGGCGAGCCTGAGCGTGCCTCCG
GTGCTCACGTCCCCGCGCCACGACGCCATCGCCCTCCACAGGGCCTTCAAAGGTACGC--ACGCACGCGCACACATAGAA
TCATACAAGCCTGTCTACGATTCGTTTCATCACGTCGGTCTAATACC---------------------------------
------------GCAGGGTTCGGGTGCGACAGCACGACGGTGATCAACATCCTGGCGCACCGCGACGCGACGCAGCGGGC
GCTCATCATGCAGGAGTACCGGGCCATCTACCA-----------------------------------------------
-----------------------------------------CCAGGACCTCTACCACCGCCTGTCCACCGAGCTCAGCGG
GAACCACAAGGCATGCAAACTGCAAAAT----------------------------------------------------
--------------------------------------------GATACTAATATATACTTATAAATCACCTAGCAAATA
TCATGCAAAATGATAAGTCACACACACACACAGCATAGCATAGTAT----------------------------------
----------------------------------------------------TGCTCCCGAAATGACTTGTCTGCTTGGG
TGTGGCGGTTCCTTCTCCAGAAGGCGATGCTGCTGTGGGTGCTGGACCCCGTTGGCCGCGACGCCGCCATCCTGAACCAG
TCCCTCAACGGCGACATCACCGACCTGCGCGCCGCCACGGAGGTCATCTGCTCCCGGACGCCGTCGCAGCTGCAGATCAT
GAAGCAGACCTACCGCGCCCGCTTCGGCTGCTACCTCGAGCAGGA-----------------------------------
------------------------CATCACCGA-----------------------------------------------
--------------------------GCGCACCTACGGCGACCACCACAAGGTACGTCTTT--------GTTTGCCTCCA
CAGCACCATCGATAC--ATACGCTCATCTGTGCAG-TGTTTGAACCTTTCATCATTTTGTGTGTTGCTC-------GTCG
CTGGATGCAGCTTCTGCTGGCGTACTTGGGGATCCCGCGGTACGAGGGCCCGGAGGTGGACCCGGCGGCGGCGGCGCGCG
ACGCGAGGGAGCTGTACCGCGCCGGCGAGAAGCGGCTCGGCACCGACGAGCGCGCCTTCATCCGCGTCTTCACCGAGCGC
AGCTGGGCGCACCTCGCCGCCGTCGCCGGCGCCTACCACCACCTGTACGCGCGCTCCCTGGAGAAGG-------------
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----------------------------------------------------------------------------
>chr3B_1450
--------------------------------------------------------------------------------
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---------------TGCAGAAGGCGATGCTGCTGTGGGTGCTGGACCCCGTGGGCCGCGACGCGACGATACTGAACCAG
TCCCTCAACGGCGACATCACCGACCTGCGAGCCGCCACGGAGGTGATCTGCTCCCGGACGCCGTCGCAGCTGCAGATCAT
GAAGCAGGCCTACCGCGCCCGCTTCGGCTGCTACCTCGAGCAGGA-----------------------------------
------------------------CATCACCGA-----------------------------------------------
--------------------------GCGCACCTACGGCGACCACCAGAAGGTACGTCTTCGA----TCGTTCCCATCCA
CGTCACGATTTT-----TTTTCTTTCTCTCTGTACATGTCAGAATCTACCATTATATCGGCTGTTGATGA-------TGG
CTGGATGCAGCTTCTGCTGGCGTACCTGGGGATCCCGCGGTACGAGGGCCCGGAGGTGGACCCGGCGGCGGCGGCGCGCG
ACGCAAGGGAGCTGTACCGCGCCGGCGAGAGGCGGCTGGGCACCGACGAGCGCGCCTTCATCCGCGTCTTCACCGAGCGC
AGCTGGGCGCACCTCGCCGCCGTCGCCGGCGCCTACCACCACCTGTACGCGCGCTCTTTGGAAAAGGT------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>SNPs
-------------------S----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------
---------------------------------------------S----------------------------------
-----------------------------------------------------------------------------SSS
SSSSSS--S-S----------S-------------------S--------------------------------------
-----------------S----------------------------------------SS-----------------S--
----------------------S------------------------------S-------------S---------S--
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S--S--------
---------------------------S--------S---S---------------------------------------
----------------------------------------------------------------S----S--SSS--S--
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
---------------------------------------------------S----------------------------
-----------------------------------S--------------------------------------------
-------------------S------------------------------------------------------------
------------S-------------------------------------------------------------------
---------------------------------------------------S----S---------------------S-
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------S-----------------------------------------------------
------------------------S--------------------------S---------S-----------SS-----
-S---------------------S-S------------SSS----------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-SSS----------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-SS--
-----S--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
----------------------------S-----------------------------------------S---------
------------------------------S---------------------------------------------
>forward_695
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-----------------------------------CATGGGAGGAGGAGAGGGAA-------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_2825
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------GGGGAACTACCGAACCTTCC------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_702
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GGAGGAGAGGGAAGGGTCTT------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_2921
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CCACCAAGACTGCCATGTGT--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
