>input_sequence_52371
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-------------------------------------------------------ATGATCCTAGAACTGAATCAATCTT
CATCGATTATAGATATACTAGCACCTTCCGTTTCTGA--------------------------AAGCTTCCAATTTTATG
GCATATTACAGGACTTGTCAGGCACAACTTTCACAGGGGAAAAAAGGTGCTTGGAAATGGCCAGTGACACAAACGATGCA
GAGCAAGAGCAG------GCAACCGAAAATCAGTTGGCAAGCATCAGCCGCCTCACACCAGACGTCCTGCACGAGATACT
TCTCCGGCTTCCGGTCAGCACTCTGCAGAGACTCTGCCGGACGTGTCACCAATGGCGCGGGGTGATCAGCGACCCCTGCT
TCATCATGGACCATGCCAATCGTGCACCCGAGCACCTCCTCCTTTTCCTGCCGAGGCTGGACGCCTCGGCGAGCCTCAAG
ACCGCCATGCCTGGCCGTGT---GAAGCTCTTCGACGAGAAATGGTCCGTGTCAACGTGGGCGGCGTCTTCCATGGATCC
GGACGACCACCTCTTCGCGTCATGCAACGGCCTGCTCTGCTTCTACCGGAAGTACACGCTGAAGATCGTCAACCCCGCGA
CCGGCCAGCGCCTGCACCTCTCGAAGCCCGACGGGAGATCGCTCCGTGACCTGTACTACCTCTATAGTTTCGGGTTCCAC
CCGGCGACGGGGGAGTACAAGCTCGTCTACTTCCTCCGCGAGCCCCGGCACGGCCGGTCGTCGGGGCAGCCGTTCCGCTT
CGACGCCATCCAGGTGCACACCCTCGGCGAGGACGGGTGGCGGGACGTCAGGGCGCCGAGGGAGAGCTGCCTGGTGAACC
TCGGGGTCGTCAACGTGGACGGCGCGATGTACTGGATATCGGAGGAGGAAGGGGCGTGCTGCGGCGCGGCGGTCATGGCG
TTCGATCTCAAGGACGAGACCTTTGTGACGTTGAGGCCTCCGCCGTTGAGAGCGTGCGGCGTGGCGACGGACG---GGCC
CTGCGGCGCCCCCGCGCTGTCCTACTACGTGACGGAGGTGGAGAAGAAGGTTTGTCTGGTGACAGCCCCTTTCAGCAGCA
GCGCTCCCCGGTGGCGCCGCTACAACGCCGAGGTCTCCGGGAGGATGGACGTCTGGACGCTCGAGAGCCGGGGCGAGGAC
AGGTGGTCGCTCAAGTACAGCGTCGACCTGTCGCCGTCGGCGCCGCGGTGCGTCCCGCAGCCGTGCTTCGTCCGCGGGGG
GAAGGTTCTGCTGCACGGCCGCGACGGCGACGCGTTCTGCCGGGACCTGCGGGGCGA---CGAGGACGGCGGGGAGGAGG
TGAGGCTGCTGAATTTCAGGCCTTACAGGTACTACGAGACGCAGGCGTACCTGTACAAGGAGACGCTCGTCCCGTTGGAC
GTGTACGCCGGGGCGGCCATTGTTCGCACGCCGCACTGGCCTCTCCCTCCGCCAGGTTCCTCCTGA--------------
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-----------------------------------
>chr5B_1_TraesCS5B01G252700
ATACT-GGGCCTTTGCTGCTTGCTGGGCCAATGTCCTTGATATTTTTCTGATTTTGGATTCTACCGGTGGTTGAAGAAGC
CGTCACGCAATCAGAGAGCGGATAGCGGTAACTGCGGAGACC-----------TGGAGTGCGATGCTTGCGTCCACGGCG
GCTAGTTACTGCCAGAGA---GGAGGTCGATAAGTAGCACTCCCG---GAGGATAACGGTGGGATTAAGCTTGTGGCCGC
GGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCCTGGGGGCTTTGTTGA-------------------TGATTCCGCTGT
AAGTTTTCTTCAGATTCCAGCA----ATCTTTTTACCTGGTGTCGGATTCGGCCGCGGTGTCTTGTGTGGCT---AGCTA
AGTGGTTTTGAAGTTGGG----GATGAACTGGAACCTGGAACTGGAAGCAACTTGGACTAGAACCCTGTAGAATGAGTGA
GTGATGGGTTAGTATGCGTAG----GCGTGT----TAGTGGCTTTGTTGGATGCGCCCTGAAGGCTTTCTGCTGCTCCAG
TTCATGGTCCTTCGTTGCTGCTGCATCTACTAGAAAAAGTTGGCCGTGCCTTCGTTTCAACCCCA--GGCTGCGCGGCGG
AACACTTCAAACTTCATTTGCAGCTT-----TGCAGGGCTATTCTAACCAATTCAAGTTGAAAATCAGAGCTAGTAGTAC
ATGCTAGACCAGTGACTGAAAATAGTAGAATGCCTTCTTTTCCGAGGGTATACGACCAAAGCAAAGCCGATTCTCTTGGA
AGGAATTCTGTTCTGGAAGC--------------------ACAAATATACTGAAAACTTAGTCAGCATAATCAAATAGTA
----CTATTTGTTTGGCAGAATGAAAATCCAACGCCTTAAGATGTTCAATAGTATTCTATATAGGCGGGGATGGTGTGTT
AACTAATAGTACAAGCAATCATCTGTCTT--------TAACGAATACATAAGATGGACGGTTTTCCCCTCTTGGATCTGA
TAAGCCGTTCCCATTGAAAAATGGGCTGTTTCTGTCAAAAGTTCGAAGTGATCGCATGATCCTAGAACTGAATCAATCTT
CATCGATTATAGATATACTAGCACCTTCCGTTTCTGA--------------------------AAGCTTCCAATTTTATG
GCATATTACAGGACTTGTCAGGCACAACTTTCACAGGGGAAAAAAGGTGCTTGGAAATGGCCAGTGACACAAACGATGCA
GAGCAAGAGCAG------GCAACCGAAAATCAGTTGGCAAGCATCAGCCGCCTCACACCAGACGTCCTGCACGAGATACT
TCTCCGGCTTCCGGTCAGCACTCTGCAGAGACTCTGCCGGACGTGTCACCAATGGCGCGGGGTGATCAGCGACCCCTGCT
TCATCATGGACCATGCCAATCGTGCACCCGAGCACCTCCTCCTTTTCCTGCCGAGGCTGGACGCCTCGGCGAGCCTCAAG
ACCGCCATGCCTGGCCGTGT---GAAGCTCTTCGACGAGAAATGGTCCGTGTCAACGTGGGCGGCGTCTTCCATGGATCC
GGACGACCACCTCTTCGCGTCATGCAACGGCCTGCTCTGCTTCTACCGGAAGTACACGCTGAAGATCGTCAACCCCGCGA
CCGGCCAGCGCCTGCACCTCTCGAAGCCCGACGGGAGATCGCTCCGTGACCTGTACTACCTCTATAGTTTCGGGTTCCAC
CCGGCGACGGGGGAGTACAAGCTCGTCTACTTCCTCCGCGAGCCCCGGCACGGCCGGTCGTCGGGGCAGCCGTTCCGCTT
CGACGCCATCCAGGTGCACACCCTCGGCGAGGACGGGTGGCGGGACGTCAGGGCGCCGAGGGAGAGCTGCCTGGTGAACC
TCGGGGTCGTCAACGTGGACGGCGCGATGTACTGGATATCGGAGGAGGAAGGGGCGTGCTGCGGCGCGGCGGTCATGGCG
TTCGATCTCAAGGACGAGACCTTTGTGACGTTGAGGCCTCCGCCGTTGAGAGCGTGCGGCGTGGCGACGGACG---GGCC
CTGCGGCGCCCCCGCGCTGTCCTACTACGTGACGGAGGTGGAGAAGAAGGTTTGTCTGGTGACAGCCCCTTTCAGCAGCA
GCGCTCCCCGGTGGCGCCGCTACAACGCCGAGGTCTCCGGGAGGATGGACGTCTGGACGCTCGAGAGCCGGGGCGAGGAC
AGGTGGTCGCTCAAGTACAGCGTCGACCTGTCGCCGTCGGCGCCGCGGTGCGTCCCGCAGCCGTGCTTCGTCCGCGGGGG
GAAGGTTCTGCTGCACGGCCGCGACGGCGACGCGTTCTGCCGGGACCTGCGGGGCGA---CGAGGACGGCGGGGAGGAGG
TGAGGCTGCTGAATTTCAGGCCTTACAGGTACTACGAGACGCAGGCGTACCTGTACAAGGAGACGCTCGTCCCGTTGGAC
GTGTACGCCGGGGCGGCCATTGTTCGCACGCCGCACTGGCCTCTCCCTCCGCCAGGTTCCTCCTGACATGACAGTACTGG
CTTTGCAGTGTTGGAGCGCCTTGTGTTCTGAATTTCTGATTACGGCTCTGCGTTTGCCTTCGGTGGTCATGGTCCAGTAT
AGGTGTAGGCAGCAGATGAATGA----------------------ATTACTTCTGAAACATGAATGAATTATGGTGTAAT
TCTCGATGGAGATTTAAGCAACTGGTTATTGTAACATATTCAGAAGT---------------------------AATAAG
TATTTTGTGCAC------------------------------TAAGCTTTTCTACTTCACTCGTGTAGTG--AATAGTGC
AAATTCTACCCA--------------------------------------------------------------------
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--------------TGATATATCAAGTGGGAACCAATGGAAAATGGCAAAGCCTTCGTCCAGAAAACAGGGCAGCCTTGA
AGTTTTAGATCCACCAAAGTTCTTTTTATT---TTTTTAAAGAAA-----------------------------------
------------AAAGTTGGGCTAATTGGGCCGAACCTGGCCTGCGCAGCATAAAACACCTCGTTCCTCT--TCCGCCAC
GCTAAAAAAGAAAGAACTTGTTCCTCTTGGGCGAAACCCCGGAGCCGCCAGAAGGGGTCGAA-----GAGCTGACGAGGG
GGGAAGCGGCGGGAAATCGTTTCACCGTCAAGCGGAGAGCCCTCCCATCCCAATCCAATGGCGGCGACGGCGGAGCTCGT
CTGATCC--------GAATCGCGCTCGTGAGTCCTCGATGCCCCCTTTCGCTCGCGGAATGCTTTCTCCCCCAATATCCT
TCTTGTCCGCGCTTCTCCATCTGTAACGGCGGCTAGGGTTTGTAGCTACTTGACGTGGTTGAGGGGCTGACTACTTGCTG
TAATGGCGCCCGAGGGCGTCTAGGGTTTGTAGCTACTTGCTGAAGTTGAGGGATTGAGGCGCCGGAGGGACGGCGCGCAC
GAGTGTTCGTTGGATTTGACAGTAGCCTGCATTTTTGGTACATGAGAGATTTG-----TTTTTGACCGTGGGTTCACTTT
TTGGGTAACTAGAGATTGTT-ACTTTTTTTTAGCCTGGAGTAGTC-------------AAAATTTCGGAGCAGAAATTTG
GAGATGCTATCAATATCTTCCT--GCACATTGGTT
>chr5A_1
ATACTCGGGCCTTCGCTGCTTGCTGGGCCTATGCCCTTGATATTTTTCTGTTTTTGGATTCTACGGGCGGTTGAAGAAGC
CGTCACGCAATCAGAGAGA-GATAACGGTAACGCTGGACTCCTGGAGACTTGGTGGAGTGCGATGCTTGGGTCCACGAAG
GCTAGTTACTGCCAGAGA---GGAGGCCGATAAGTAGTAGCACTCTCCGAGGATAACGGTGGGCTTAAGCCTGTGGCCGC
GGGCGG------CTTCTTCTTCGTCTTCTTCGCCTGGGGAAGATAGATCCCGCCGGGAGTTGGAGAGAAGATTCCGCTGT
AAGTTTTCTTCAGATTCCTGCA----ATCTTTTG-CCTAGTGTCGGATTCGGCCGCCATGTC-------------AGCTA
GGTAGTTTTCAAGTCGAGGATCGATGAACTGGAATCTGGAAT------GAACTTGGTCTAGAACCTTGTAGAACGTGTGA
GTGATGGGTTCGTATCCATACGCACGCGTGT----TAGTGGCTTTGTTGGATGCGCCCTGAAGGCGTGCTGCTGTTCCAG
TTCATGGTCCTTTGTTGCTGCTGCAGCTACTAGAAAAAGTTAGCCATGCACTCGTTTCA---------------------
----------------TTTGCAGCCTTGCAGTGCAGGGCTATTCTGACCAATTCAAGTTGAAAATCAGAGC---TAGTAG
ATGCTAGACTAGTGACTGATAATAGCAGAGTGCCTTCTTTTCCGAGGGC--ACGACCAAAGCAAAGCCGGTTCTCTTGGA
AGGAATTTTGTTCTAGAAGCACATATTATGTTGAACACAAACAAATACACTGAAAACTTAGTCAGCATAACCAAATACTT
C-TACTACTTGTTTGGCAGAATATGAATACTCCCTCCGTGCGAGAATAAACGACTCAACTTTATATTAACT---------
----------------------------------------------------------------------TTGGGTCAGA
TAAGCCGTTCCCATAGAAAAATGG-CTGTTTCTGTCAAAAGTTCCAAATGATCGCATGATCCTAGAACTGAATCGATCTT
GATAGATTATAGATATACTAGCACCT-CCATTTCTGAAAGCAACGCACCATATGTATGTTCCTAAGCTTCCAATTTTATG
GCATATTACAGGACTTGTCAGGCACAACTTTCTTAGGGG--AAAAGGTGCTTGGAAATGGCCAGTGACATAAACGACGCA
GAGCACGAGCAG------GCAACCGAAAATCAGTTGGCAAGCATCAGCCGCCTCACACCAGACGTCCTGCACGAGATACT
TCTCCGGCTTCCGGTGAGCACTCTGCAGAGGCTCCGCGGGACGTGCCACCAATGGCGCGGCGTGATCAGCGACCCCTGCT
TCATCATGGACCATGCCAACCGTGCACCGGAGCACCTCCTCCTCTTCCTGCCCAGGCTGGAGGCCTCGGCGAGCCTCAAG
ACCGCCATGCCTGGCCGCAT---GAAGCTCTTCGATGAGAAATGGTCCGTGTCAACGTGGGCGGCGGCGTCCATGGACCC
GGACGACCACCTCTTCGCGTCCTGCAATGGCCTGCTCTGCTTCTACAGGAAGTACACGCTGAAGATCGTCAACCCCGCGA
CCGGCCAGCGGCTGCACCTCTCGAAGCCCGACGGGAGATCGCTCCGCGACCTGTACTATCTCTACAGCTTCGGGTTCCAC
CCGGCGACGGGGGAGTACAAGCTCGTCTACTTCCTCCGCGAGCCCCGGCACGGCCGGCCGTCGGGACAGCCGTTCCGCTT
CGACGCCGTCCAGGTGCACACCCTCGGCGGGGACGGGTGGCGGGACGTCAGGGCGCCGAGGGAGAGCTGCCTGGTGAACC
TCGGCGTCGTCAACGTGGACGGCGCCATGTACTGGCTCGCGGAGGAGGAAGGGGCGTGCTGCGGCGTGGCGGTCATGGCG
TTTGATCTGAAGGAAGAGACCTTTGTGACGTTGAGGCCTCCGCCGCTGAGAGCGTGCGGCGGGGCGACGGACGAGCGGCC
CTGCGGCGCTCCCGCGCTGTCCTACTACGTGACGGAGGTGGGGAAGAAGACGTGCCTGGTGACCGCCCCTTTCAGCAGCA
GCGCCCCCCGGTGGCGCCGCTACAACGCCGAGGTCTCCGGGAGGATGGACGTCTGGACGCTGGAGAGCCGGGGCGAGGAC
CGGTGGTCGCTCAAGTACAGCGTCGACCTGTCGCCGTCGGCGCCGCGGTGCGTCCCGCAGCCGTGCTTCGTCCGCGGGGG
GAAGGTCCTGCTGCACGGCCGCGACGGCGACGCGTTCTGCCGGGACCTGCGGGGCGA---CGAGGACGACGGCGGGGAGG
TGAGGCTGCTGAACTTCCGGCCTTACAGGTACTACGAGACGCAGGCGTACCTGTACAGGGCGACGCTCGTCCCGTTGGAC
GTGTACGCGGGGGCGGCCATTGCTCGCGCGCCGCACTGGCCTCTCCCGCAACCAGGTTCCT-------------------
-----------------------------GAATTTCTGATTACGACTCTGCGTTGGCCTTCTGTGGTCATGGTCCGGTAT
AGGTGTAGGTAACAGAGATGTATTTTGTACAAACTTTCGAACATGTTTACTTGTGAAACATGAATGAATTATGGTGTAAT
TCTCGGCGGAGATTTAAGCTACTGGTTATTGTAACATATTGTATGCTAATAAGGATTTTGTGCCCCCGCGAAAAAATAAG
TATTTTGTGCAGTAAGCTTTTCTGTTTTTTTTTTTGAGGGGATAAGCTTTTCTG-TTCACTCGTGTA--G--AATAGCGC
AAATTCTACCCA--------------------------------------------------------------------
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--------------TGATATATCAA---------AATGGAAAACGGCAAAGCTTTCGTCCAGAAAACAGGGCAGCCTCGA
ATTTTTAGATCCACCAAAGTTCCTTTTTTTCTGTGAAAAAAAAAGGTTCTGAACACAGAATTTTACCCGAGTCCAGTGG-
---AGAATGGACAGTGTTGGGCTAATTGGGCCGAACCTGGCCTGCGCAGCATAAAACA-CTCGTTCCTCT--TCCGCCAC
GCTAAAAAAAATAGAACTTGTTCCTCTTGGGCGAAGCCCCGGAGCCGGCACAAAGGGGTCGAAGAGCCAGCCGACGA-GG
GGGAAGCGGCGGGAAATCATTTCGCCGTCAAGCGGAGAGCTCTCCCATCCCAATCCCATGGCGGCGACCGCGGAGCTCGT
CTGATCC--------TAATCGTGCTTGTGAGTCCTCGATACCTTCTTTTGCTTGCGGAATGCATTCTCCCCCGATTTCCT
TCTTGTCCGCGCTCCTCCATCTGTAACGGCGGCTAGGGTTTGTAGTTACTTGCCGTGGTTGAGGTGCTGACTACTTGCTG
TAATGGCGCCCGAGGGCGTCTAGGGTTTGTAGTTACTTGCTGTAGTTGAGGGATTGAGGCACC-GAGGGACGGCGCGCAC
GAGTGTTCGCTGGATTTGACAGTAATCTGCACTTTTGGTGCATGAGAGATTT----TTTTTTTGACCGTGGGTTCAC--T
TTGGGTAACTAGAGATTGTT-ACTTTTTTT-AGCCTGGAGTGGTC-------------AAAATTTCGGAGCAGAAATTTG
GAGATGCTATCAGTATCTTCCT--GCACATTGGTT
>chr5D_43
-------------------------------------------TTTCCTCATTTTGGATTCTACCGGCGGTTGAAGAAGC
CGTCACGCAATCAGAGAGCGGAGAGCGGTAACCGCGGAGGCC-----------TGTAGTGCGATGCTTGCGTCCACGGCG
GCTACTTACTACAGTACTTCTGGGGGTCGATAAGTAGCAGTTGCG---CAGGATAACGGTGGGGCTAAGCTTGTGGCGGA
GGCGGCTTC-----------TCTTCTTCTTCACCCGGGGAAGATAGATCCTGTTGCAAGTTCGAGAGGTGATTCCGCTGT
AAGTTTTCTTCAGATTCCAGCAATCTATCTTTTG-CTTAGTGTCGGATTCGGCCGCCATGTCTAGTGTGGTCAGCAGCTA
GGTGGGTTTGAAGTTCAG----GATGAACTGGAATCTGGGAT------CAACTTGGACTAGAACCTTGTAGAATGTGCGA
GTGATGGGTCCGTATGCATAAGCGTGTTAGTGGCCTACTGGCCTTGTTGGATGCGCTGTGGAGGCTTCTTGCTGTTCCAG
TTCATGGTCCTCTGTTGCTGCTGCGTCTACTAGAAAAAGTTAGCCGTGCCTTCGTTTCAGCCGCAGGGGCTGCGCGGCGG
AACACTTCAAACTTCATTTGCAGGCT-----TGCAGGGCTATTCTAACCAATTCAAGTTGAAAATCAGAGC---TAGTAC
ATGCTAGACCAGTGACTGAAAATAGTAGAGTGCCTTCTTTTCCGAGGGC--ACGACCAAAGCAAAGCCGGTTTTCTTGGA
AGGAATTCTGTTCTGGAAGCACATATTATGTTGAACACAAACAAATACACTGAAAACTTAGTCAGCATAACCAAATACTT
----CTACTTGTTTGGCAGAATGAAAATCCAACGCCCTCAGATGTTCATTG---TTTTATATTGGCGGGGATGGTGTGTT
AACTAATAGTACAAGCAATCATCTGTCTT--------T-------ACATAAGATGGACGTTTTTTCCCTCGTGGATCAGA
TGAGCAATCA--------------------TCTGTCAAAAGTTCGAAGTGATCGCATGATCCTAGAACTGAATCAATCTT
CATGGATTATAGATATACTAGCACCTTCCGTTTCTGAAAGCAATGCACTATATA----TTCCTCAGCTTCCAATTTTATG
ACATATTACAGGACTTGTCATGCACAACTTTCTAAGGGG--AAAAGGTGCTCGCAAATGGCCAGTGACGCAAACGATGCA
GAG------CAG------GCAACCGAACATCAGTTGGCAAGCATCAGCCGCCTCACACCAGACGTCCTGCACGAGATACT
TCTCCGGCTTCCGGTCAGCACTCTGCAGAGACTCCGCGGGACGTGCCACCAATGGCGCGGCGTACTCAGCGACCCGTGCT
TCATCATGGATCATGCCAATCGTGCACCGGAGCACCTCCTCCTCTTCCTGCCCAGGCTGGAGGCCTCGGCGAGCCTCAAG
ACCGCCATGCCTGGCCGTGT---GAAGCTCTTCGACGAGAAATGGTCCGTGTCAACGTGGGCGGCGTCGTCCATGGACCC
GGACGACCACCTCTTCGCCTGCTGCAACGGCCTGCTCTGCTTCTACCGGAAGTACACGCTGAAGATCGTCAACCCCGCGA
CCGGCCAGCGCCTGCACCTCTCGAAGCCCGACGGGAGATCGCCCCGTGACCTGTACTACCTCTACAGCTTCGGGTTCCAC
CCGGCGACGGGGGAGTACAAGCTCGTCTACTTCCTCCGCGAGCCCCGGCACGGCCGGTCGTCGGGGCAGCCGTTCCGCTT
CGACGCGATACAGGTGCACACCCTCGGCGAGGGCGGGTGGAGGGACGTCAGGGCGCCGAGGGAGAGCTGCCTGGTGAACC
TCGGCGTCGTCAACGTGGACGGGGCCATGTACTGGCTCGCGGAGGAGGAAGGGGCCTGCTGCGGCGTGGCGGTCATGGCG
TTTGATCTCAAGGAAGAGACATTCTCGTCGCTGAGGCCTCCGCCGCTGAGAGGGTGCGGCGGGGCGACGGACG---GGCC
CTGCGGCGCTCCCGCGCTGTCCTACTACGTGACGGAGGTGGAGAAGAAGGCGTGCCTGGTGACCGCCCCATTCAGCAGCA
GCGCTCCCCGGTGGCGCCGCTACAACGCCGAGGTCTCCGGGAGGATGGACGTCTGGACGCTCGAGAGCCGCGGCGAGGAC
CGGTGGTCGCTCAGGTACAGCGTCGACCTGTCGCCGTCGGCGCCGCGGTGCGTCCCGCAGCCGTGCTTCGTCCGCGGGGG
GAAGGTCCTGCTGCACGGCCGCGACGGCGATGCGTTCTGCCGGGACCTGCGGGGCGGGGGCGAGGACGACGGCGGGGAGG
TGAGGCTGCTGAACTTGAGGCCTTACAGGTACTACGAGACGCAGGCGTACCTGTACAGGGAGACGCTCGTCCCGTTGGAC
GTGTACGCGGGGGCGGCCATCGTTCGCTCGCCGCACTGGCCTCTCCCTCCACCAGGTTCCT-------------------
-----------------------------GAATTTCTGATTACGACTCTGCGTTGGCCTTCTGTGGTCATGGCCCAGTAT
AGGTGTAGGTAACAGAGATGTATTTTGTACAAACTTTCGAACATGATTATTTCTGAAACATGAATGAATTATGGTGTAAT
TCTCGGTGGAGGTTTAAGCTACTGGTTATTGTAACATATTGTAAACTAATAAGGATTTTGTGCCCCGGCAAAAAAATAAG
TATTTTGTGCAG------------------------------TAAGCTTTTCTG-TTCACTCGTGTA--GTGAATTGTGC
AAATTCTATCCCTCTATACCTATTATTAAAGGGAATAGATATTCTTGGTTTGGTTTAGTACTTGTGCTTTCATAGAGACC
GCGAAAAATAATTGGGTCAAAATAAATTAACATTTTAGGAATTAAACATAGGCCTTCCTGTCTGGATCTTCAATGTAACA
ACCAACGATATACGCGTCATTCACATTTACTAATTCCAACCCGCTCTAAATATACGAGTGGCAGTCCTCTTGTTTAGGCC
GAGCTAAATAAAGGGAAGATTTTGGGCTTAAATAAAATATTTAAACGATGTGGCTAATTAAAGAAAGGATTATGGGTAAA
CTGGTGGAATAATTAGAAAAAAGATTGTGGTCTTAATAAATAGAATATTCAAATAGATGATGCTAATTAAATGAAAGACT
TGAGGTAAAAAGGTAGGATAATTAAAAGGAAGGATATGTAGGCTTTAATGTGTTGAGGCTACTAAATTAGAAAAGCAAGG
ATTTGATTCCTGACTAAAACAGGTGAAGACGTCAAGGTAATTAAAGGAAGGATTATACTTAAATGGAATCAGTGGGAGAT
TATGCCCAAAAATAAAATATGAACACGGCTAAATTGCATCGTATTTTTTAATGTTCATTTTGTAAAGGATGCTGTGTTGC
AGCATGTTCTTCATAGTGAATCCGGTGCTGTGGAATATTATGCTTGCATAAAACATCAATTTTTCCCGTTGCAACGCACG
GGCATATGTGCTAGTGATATAT-----------CAATGGAAAATGGCAAAGCTTTCATCCAGAAAACAGGACAGGCTCGA
ATTTTTAGATCCGCCAAAGTTTTCTTTTGAAAAG------AAAAAGTTCTGAACACAGAATTTTACCCGAGTCCAGTGGA
GGCAGAATGGACAATGTTGGGCAAATTGGGCCGAACCTGGCCTGCGCAGCATTAAACA-CTCGTTCCTCTCTTCGGCCAC
GCTA-AAAAAATAGAACTTGTTCC-----GGCGAAACCCCGGAGCCGGCACAAGGGGTCGAA-----CAGCCGACGA-GG
GGGAAGCGGCGGGAAATCATTTCAGCGTCAAGCGGAGAGCCCTCCCATCCCAATCCCATGTCGGCGACCGCGGAGCTCGT
CTGATCC--------GAATCGTGCTTGTGAGTCCTCGATGCCCCCGTTTGCTCGCGGAATGCTTTCTGCCCCGATTTCCT
TCTTGTCCGCGCTCCTCCATCTGTAACGGCGGCTAGGGTTTGTAGTTACTTGCCGTGGTTGAGGTACCGACTACTTGCTG
TAATGGCGCCCGAGGGCGTCTAGGGTTTGTAGTTACTGGCTGTAATTGAGGGATTGAGGCGCCGGAGGGACGGCGCGCAC
GAGTGTTCCTTGGATTT---------------------------------------------------------------
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>chr7A_469
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--------------------------------------------TGTTAGATGCGCCCTGAAGGCTTCTTGCTGTTCCAG
TTCATGGTCCTTTGTTGCTACTTCGTCTACTAGAAAAAGTTAGCCATGCACTCGTTTGAACTACA--GGGTGCGCGGCGG
AACACTTCAAACTTCATTTGCAGCCT-----TGCAGGGCTATTCTCACCAATTCAAGTTGAAAATCCGAGC---TAGTAC
ATGCTAGACCAGTGACTGAAAATAGTAGAGTACCTTCTTTTCCGAGGGT--ACG---------AAGCCGGTTCTCTTGGA
AGGAATTCTGCTCTGGAAGCACATATTATGTTGAACACAGAACAATATACTGAAAACTTAGTCAGCATAACCAAATACGG
AGTACTTCTTGTTTGGCAGAATGAAAATCCAACGCCCTAAGATGTTCATTCGTATTTTATATAGGCGGGGATGGTGTACT
AACTAATGGTACAAG-AATCATCTGTCTCAACGAATAT-------ACGTAAGATGGACGTTTTTTTCCTCTTGGGTCAGA
TAAGACGTTCCCATAGAAAAATGGGTCGTTTCTGTCCAAAGTTCTAAGTGATTGCATGATCCTAGAACTGAATCAATCGT
CATTGATTATAGATATAGTAGCACCTTCTGTTTCTGA--------------------------AAGCACTGCACT-----
------------ACTTGTTAGGCGCAACTTTCTTAGGGG-AAAAAGGTGCTTGGAAATGGCCAGTGACACAAATGATGCA
GAG------CAAGAGCAAGCAACTGAAAATCAGTTGGAAACCATCAGCCGCCTCACACCAGACATCCTACACGATATACT
TCTCTGGCTTCCAGTGAGCACTCTGTAGAGGATCC-CAGGATGTGCCACCAATCGTGCAGCGTGATCAGCGACCCCTACT
TCATAATCGACCATGCCAACCGTGCACCGGAGCACCTCCTCCTTTTCCTGCCCAGGCTGGAGGCCTCGGCGAGCCTGAAG
ACCACCATGCCTGGCAGTAGCTAGAAGCTCTT------------------------------------------------
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>chr5A_2610
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--------------------------------------------------------------------------AATAAG
TATTTTGTACAA------------------------------TAAGCTTTTCTG-TTCACTCGTGTAGTG--AATTGCAC
AAATTCTACCCA--------------------------------------------------------------------
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--------------TGATATAT-----------CAATGGAAAATGGCAAAGTTTTCGTCCAGAAAACATGACAGCCTCGA
ATTTTTAGATCCACCAAAGTTTTTTTTTTT---TGAAAAAAAAGTTAT--------------------GAGTCCAGTGG-
---AGAATGGACAGTGTTGGGCTAATTGGGCCGAACCTGGCCTGCGCAGCATAAAACA-CTCGTTCCTCTCTTCGGCCAC
GCTAGAAAAAATATAACTTGTTCCTCTTGGGCGATACCCCGGAGCCGCCGGAAGGGGTCGAG-----GAGCCGACGA-GG
GGGGAGCGGCGGGAAATCATTTCACCGTCAAGCGGAGAGCCCTCCCATCCCAATCCCATGGCGGCGACCGCGGAGCTCGT
CTGATCTGAAATTCTGAATCGTGGTCGTGAGCCCTCGATGCCCCCTTTTGCTCGCGGAATGCATTCTCCCCCGATTTCCT
TCTTGTCCGCGCTCCTCCATCTGTAACGGCGGCTAGGGTTTGTAGTTACTTGCCGTGGTCGAGGTGCTGACTACTTGCTG
TAAT----------GGCGTCTAGGGTTTGTAGTTACTGGCTGTAGTTGAGGGATTGAGGCGCTGGTGGGACGGCGCGCAC
GAGTGTTCG---------ACAGTAATCTGCACTTTTGGTACATGAGAGAAAATATATTTTGTTGACCGTGGGTTCAC--T
TTGGGTAACTGGAGATTGTTGACCTTTTCTTAGCCTGGCGAAGCGAGTATTTTTAGTGAAAATTTCGGAGCAGAGATTTT
GAGATGCTATCAGTATCTTCCTTGGCACATTGGTT
>SNPs
-------------S---------------S---S---------------------------------S------------
--------------------------------S------S----------------------------------------
---------------------------------------S-S---------------------S----------------
----SSS-SSSS---------------------------SSSS-SSSSS-------------------------------
---------------------------------SS---S-----------------SS-----S------SS--------
S---------------S-----------------S------SSSSSSS-----------------S---------S----
----------S------S--S----------------------------------------------S------S-----
------------S----------------------------S--------------------S-----------------
------------------------S----------------------------------------------SSS------
-----------------------------S-------------------SS------------------S----------
----------------------------------------------------------------------S------S-S
-------S----------------------------S-------------S-----S-----------------------
--------------------------------------SSSSSSS--------------S----S------------S--
--------------S-----------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------SS-----S----------------------------------------
-----S--------------------------------------------------------------------------
----------------------------------S--S-------S--------------S-------------------
----------------------------S-----------------------S--------S------------------
--------------------------------------------------------------------S--------S--
---------------------S----------------------------------------------------------
----------------------------------------------------------------S--S------------
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----S--------------------S---------S-SS---------------------------S-------------
--S-----------S------------------------------S---------------S------------------
---------S----------------------------------------SS--S--------S----------------
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S-------------------------------------------------------------------------------
------S-------------------------------------------------------------S---S-S-----
-------------S-------------------------------------------S----------------------
--------S------------------S----------------------S----------SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S---------S------S------------------
---------S-S----SSSS-SS---------------------------------------------------------
-----S-------------S--------------------SSS--S----------------------------------
-----------S-----------------------------------------SS-------------------------
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-------------------------SSSSSSSS-------------------S------------------------S--
-S-------------------------S------SSSS---S--------------------------------------
--------------S-------------------------------------------S---------------------
---------S-S-----------------------------------------------------------S-----S--
------------------S-------------------------------------S-----------S-----------
---------------------S--------------------------S-----------------------S--S----
-------------S-------------------------------S------S-----------S---------------
--------------------------------S---------S-------------------------------------
------------------------SS-----S--------------------S------------------------SS-
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------------S----------------------
>forward_790
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--------------------------------------------------TACGACCAAAGCAAAGCCGA----------
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--------------------------------------------------------------------------------
-----------------------------------
>reverse_2557
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CTGG
CTTTGCAGTGTTGGAG----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
