>input_sequence_52354
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----------------------------------------ATGGAGACGGAGCCGCGGTCAACGCCGCACCTCCTCCTCG
TCCCCTTCCCGGCGCAGGGCCACGCGCTGCCGCTGCTCGACCTGGCCGCGCTGCTCGCGTCCCGCGGCCTCCGCCTCACC
GTCGTCACCACGCCCGCCAACGCCCCGCTCCTGTCCCCTCTCCTCGCCGCCCACCCCGGCT---CCGTCCAGCCCCTCGT
CCTCCCCTTCCCCGCGCACCCCTCCCTCCCGCCGGGCCTCGAGAACACCAGGAGCTGCCCGCCCTCCTACTTCCCCGTCT
TCATCCACGCGCTCGCCGCGCTCCGCCAGCCCGTCCTCGCGTGGGCCAGGTCGAA---------CTCTCACCCCGTCGCC
GCCGTCGTGTCCGACTTCTTCTGCGGGTGGACGCAGCCCCTCGCGGCCGAGCTCGGCGTGCCCAGGATTGCCTTCTCGCC
CTCGGGCGTCCTCGGCACCGCCGTCCCGCACTCGCTGTTCCGTCGGCTGGTCAAGCGGCCGTCGGATGCCGATGACGGGT
TCGGCGTCTCGTTCCCGGCGATTCCCGGCGAGCCGGCGTTTCAGTGGAGAGAGATCTCCGGGATGTACAGGGGCTACATG
GAAGGCCAGGCGGGGGAGCAGGTCGGCGAGGCCGTGAGGCAGAACTTCCTCTGGAACCTGGAGAGCTGGGGGTTTGTGTC
GAACACCTTCCGTGCGCTCGAGGGGAGGTACCTGGAGTCGCCGCTCGAGGACCTGGGGTTCAAGCGCGTGTGGGCGGTGG
GTCCGCTAGCGCCGGAGGCGAGCAGCTCCGGAGATCGTGGCGGCGAGGCGGCTCTTGTCGCCGGCGATCTCGGGGCGTGG
CTGGACGGCTTCCCGCAGGGCTCGGTCGTGTACGTGTGCTTCGGCAGCCAGGCGGTGCTGACCCCGGCCGTGGCGACGGC
CCTAGCCGAGGCGCTGGAGCGGAGCGCCGTCCCGTTCCTGTGGGCCGCGGG---------CGACGGCGC---GGTGCTCC
CGGAAGGGTTCGAGGCCCGCGCGTCGGCGGCGAGGCGCGGGCTGGTGGTGCGCGGGTGGGCGCCGCAGGTGGCGATCCTG
CGGCACGCGGCGGTGGGGTGGTTCATGACGCACTGCGGCTGGAACTCGGTGCTGGAGGCGGCGGCGGCGGGCGTGCCCAT
GCTGGCGTGGCCGATGACGGCGGACCAGTTCGTGAACGCGCGGCTGCTCGTGGACGAGGCGCGCGTCGCGGTGCGCGCGT
GCGCGGGCGGGATCGGCGTGGCCCCGGACGCCGGCGAGCTCGCGGCCGTGCTGGCCGGCGCTGTCGGGGAGGGAGGGAGC
GCCGCGCGG----------GCGCGCGCCAAGGAGCTCGCGGCGGAAGCGGCCGGCGCGACCAAGGAAGGCGGGAGCTCGC
GCCAGGATCTGGAGCGGCTGGTGCTAGAGATTCAGAAGCTTTGA------------------------------------
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>chr2D_1_TraesCS2D01G512700
AGATAGTTTCCTTCTTTTGCTACAGGAGAGATATGGACAATTAGGAGAGAGATACTTTCCTTTTTTCTGGAGGGCTAACA
ATGGAATTATGAGGAATTAGAAGAAATGCACCTTACATTCTGGAATTTTATCAAAAAATAAATACACCTTATATAAAGGA
ACGGAGGGAGTATACTATAAATCTGTAAATTTTCATTATGAAATAATGTTGACGTGAGCCACACAAAAGATCATGATTTT
CTACCGCATGTACTCTTCACTATAAAACTTCATGAATGCTTTTTTTGTGTAGACCACATCAAAACGTATCTCATAATGAA
AATTTACAAAGATGAAGTATACACCGTGATATACATATGTAAATTTTTACAGATTTCTTGAAACTTTACAAAGATGAAGT
ATACATATGTATATTCATCCTACTACACACTACCGGGTGTAGTTACACCCATTTCTTATATATTACCATGTGGTAGTATA
TACTCTACTTTATTATTTTTAGTATGTTCATATACTATATCTAAGATACTCCAAAGCGAGTTATGTGAAAAAATTGCATG
TGAGCCCATGTTTTTATAATATTTGTGAAATACGTACATATTTGTACATACAAAGAAGTATGCTCAAAATATACTACATA
CTACTAAAAAATAGTATATATACTACTTAAACATTCTTACATATTACATACTACGTGTACATACTCTCCGATATGATAGA
TACTATCTAGAACGTATGAAACAAAAATGGGAGTAACTACACCCGGTAGTATATATTATTTTGATTTTTTTCGAAATTTC
AAGCTGCATAGAGCAAGGGATCCAAAATAAGATTGGGTTTTTGGGTAAGCGTAGAACTAGTAGGTGCGTGTGTGTGCTGA
GGAGATAAAAAGGTTGGCCACAGCACATCGCAAGCAGGCGTAGAGAGTCAAAGAGCAAGGCGTGGCAAACTCTCCCTGTC
TCTCAGTCCCAGCCGACGAACTCATCTCCAAGCCTCGGCCATGGAGACGGAGCCGCGGTCAACGCCGCACCTCCTCCTCG
TCCCCTTCCCGGCGCAGGGCCACGCGCTGCCGCTGCTCGACCTGGCCGCGCTGCTCGCGTCCCGCGGCCTCCGCCTCACC
GTCGTCACCACGCCCGCCAACGCCCCGCTCCTGTCCCCTCTCCTCGCCGCCCACCCCGGCT---CCGTCCAGCCCCTCGT
CCTCCCCTTCCCCGCGCACCCCTCCCTCCCGCCGGGCCTCGAGAACACCAGGAGCTGCCCGCCCTCCTACTTCCCCGTCT
TCATCCACGCGCTCGCCGCGCTCCGCCAGCCCGTCCTCGCGTGGGCCAGGTCGAA---------CTCTCACCCCGTCGCC
GCCGTCGTGTCCGACTTCTTCTGCGGGTGGACGCAGCCCCTCGCGGCCGAGCTCGGCGTGCCCAGGATTGCCTTCTCGCC
CTCGGGCGTCCTCGGCACCGCCGTCCCGCACTCGCTGTTCCGTCGGCTGGTCAAGCGGCCGTCGGATGCCGATGACGGGT
TCGGCGTCTCGTTCCCGGCGATTCCCGGCGAGCCGGCGTTTCAGTGGAGAGAGATCTCCGGGATGTACAGGGGCTACATG
GAAGGCCAGGCGGGGGAGCAGGTCGGCGAGGCCGTGAGGCAGAACTTCCTCTGGAACCTGGAGAGCTGGGGGTTTGTGTC
GAACACCTTCCGTGCGCTCGAGGGGAGGTACCTGGAGTCGCCGCTCGAGGACCTGGGGTTCAAGCGCGTGTGGGCGGTGG
GTCCGCTAGCGCCGGAGGCGAGCAGCTCCGGAGATCGTGGCGGCGAGGCGGCTCTTGTCGCCGGCGATCTCGGGGCGTGG
CTGGACGGCTTCCCGCAGGGCTCGGTCGTGTACGTGTGCTTCGGCAGCCAGGCGGTGCTGACCCCGGCCGTGGCGACGGC
CCTAGCCGAGGCGCTGGAGCGGAGCGCCGTCCCGTTCCTGTGGGCCGCGGG---------CGACGGCGC---GGTGCTCC
CGGAAGGGTTCGAGGCCCGCGCGTCGGCGGCGAGGCGCGGGCTGGTGGTGCGCGGGTGGGCGCCGCAGGTGGCGATCCTG
CGGCACGCGGCGGTGGGGTGGTTCATGACGCACTGCGGCTGGAACTCGGTGCTGGAGGCGGCGGCGGCGGGCGTGCCCAT
GCTGGCGTGGCCGATGACGGCGGACCAGTTCGTGAACGCGCGGCTGCTCGTGGACGAGGCGCGCGTCGCGGTGCGCGCGT
GCGCGGGCGGGATCGGCGTGGCCCCGGACGCCGGCGAGCTCGCGGCCGTGCTGGCCGGCGCTGTCGGGGAGGGAGGGAGC
GCCGCGCGG----------GCGCGCGCCAAGGAGCTCGCGGCGGAAGCGGCCGGCGCGACCAAGGAAGGCGGGAGCTCGC
GCCAGGATCTGGAGCGGCTGGTGCTAGAGATTCAGAAGCTTTGAGCCTTTGAACGTGGCGCGATGGATTTTGGAGAACAT
TCACGGAGTTGTTTCTGGCTTTCTGCTATACA------------------------------------------------
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-CTCCATATACAGTGCTCAATTTC--------------------------------------------------------
----TAGATTTTTTCGGCACATTTTTTTTCCTGCAGCTATGCCGTTTATATATGATAAACAATCGAAATGGATTATGCAT
GC--------TTCATCCTATTTATGGTTGCCAGCATTGTTCTGTTGTGACAGTTTGAAATATTTTCTTCAATTTTGTCGA
CATTTATCCAGATACGAAACTACTCTACACACGACTGTTGAGAGACGATTCGTGGACGATGTCTTCTTTGAACGGTGTGG
ATTTGTAGAATAATGCCATCTAATGGGTGCTTTTGTCCATCGTGCATAAATGGTGCAGATAATATCGTCTGTCTAGCACT
GCTCATCCAGATATATGTATATGGGAGCCGTTTGGATGTTGTGGCACTGTTTGTAAGAGCTTCTCCAACAGTCGCCGAAT
G--CGTCGCGTGCTAAAAACTACTTTGCCGCGCGTCCATCGCCTGATTTGGCGCGGCGTGCAGCGCTGGCTCCAGCAGCC
GCGCTAAAATGCA--GCGCGC--GCGCAACTCCAGCAGTGCGCAAAAATGCAGCGC--GCACGACTCTCGCACAAACAAC
ATATGCATTCCAAAATAGAAGCAAAAA-ATCAAACACAAACAAAAATAAATCGAAATAAATAGTTCAATTTCGTTATTAC
AACTCAAACAAACAAACAGTTTATCGTTCAATACAACAAATAGTGCAATAAACACAACAAATAGTTCAACAATACAATAT
CGAAAGCACAAATCATGATGCTCTTTGTCGTCCATTTCATGCCCACCACTCCTCAATGAGATCCTTCTGAAGATCGTTAT
GCGCTGCGGGACGTCGAATGGCATGATAGGAGGCAACAAAACGGGCCACCCTTTTAGCCCTCCGTCGCACTCGCACGGGA
TGTCCCAAGAGCTCATACTGAGAGCAGTCTACATCTTGGCCACGCTCATT
>chr2A_917
GGA-----------------------------------------------------------------------------
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---------------------------------------GTAGAGAGTCAAAGAGCAAGGCGTGGCAAACTCTCT-----
---------CAGCCAACGAGCTCATCTCCAAGCCTCAGCCATGGCGACGGAGCGGCCGTCAACGCCGCACCTCCTCGTCG
TCCCCTTCCCGGCGCAGGGCCACGCTCTGCCGCTGCTCGACCTGGCCGCGCTGCTCGCGTCCCGCGGCCTCCGCCTCACC
GTAGTCACCACGCCCGCCAACGCGCCGCTCCTCTCCCCTCTCCTCGCCACCCACCCCGGCT---CCGTCCAGCCCCTCGT
GCTCCCCTTCCCCGCGCACCCCTCCCTCCCGCCGGGGCTCGAGAACACCAGGAGCTGCCCGCCCTCCTACTTCCCCGTCT
TCATCCACGCGCTCGCCGCGCTCCGCCAGCCCGTCCTCGCGTGGGCCAGGTCGCA---------CCCTCACCCCGTCGCC
GCCGTCGTGTCCGACTTCTTCTGCGCGTGGACGCAGCCCCTCGCGGCGGAGCTCGGCGTGCCCCGGATCGTCTTCTCGCC
CTCGGGCGTCCTCGGCACCGCCGTCCCGCACTCGCTGTTCCGTCGGCTGGTCAAGCGGCCGTCGGATGCCGATGACGGGT
TCGGCGTCTCGTTCCCGGCGATTCCCGGCGAGCCGGCGTTTCAGTGGAGGGAGATCTCCGGGATGTACAGGGGCTACATG
GAAGGCCAGGTGGGGGAGCAGGTCGGCGAGGCCGTGAGGCAGAACTTCCTCTGGAACCTGGAGAGCTGGGGGTTTGTGTC
GAACACCTTCCGTGCGCTCGAGGGGAGGTACCTGGACTCGCCGCTCGAGGACCTGGGGTACAAGCGCGTGTGGGCGGTGG
GTCCGCTCGCGCCGGAGACGAGCAGCTCCGGAGATCGTGGCGGCGATGCGGCTCTTGTCGCCGGCGGTCTCGGGGCGTGG
CTGGACGGCTTCCCGCAGGGCTCGGTCGTGTACGTGTGCTTCGGCAGCCAGGCCGTGCTGACCCCGGCCGTGGCGACGGC
CCTAGCCGAGGCGCTGGAGCGCAGCGCCGTCCCGTTCCTGTGGGCCGCGGG---------CGACGGCGC---GGTGCTCC
CAGAAGGGTTCGAGGCGCGCGCGGAGGCGGCGAGGTGCCGGATGGTGGTGCGCGGGTGGGCGCCGCAGGTGGCCATCCTG
CGGCACGCGGCAGTGGGGTGGTTCATGACGCACTGCGGCTGGAACTCGGTGCTGGAGGCGGCGGCAGCGGGCGTGCCCAT
GCTGGCGTGGCCGATGACGGCGGATCAGTTCGTGAACGCGCGGCTGCTCGAGGACGAGGCGCGCGTCGCGGTGCGCGCGT
GCGCGGGCGGGATCGGCGTGGCCCCGGACTCCGGCGAGCTCGCGGCCGTGCTGGCCGGCGCTGTCGGGGAGGGAGGGAGC
GCCGCGCGG----------GCGCGCGCCAAGGAGCTCGCGGCGGAAGCGGCCAGCGCGACCAAGGAAGGCGGGAGCTCGC
GCGAGGATCTGGAGCGGCTGCTGCTAGAGATGCAGAAGCTTTGAGCCTTTGAACGTGGTGCGAAAGATTTTGGATAACAT
TCACGGAGTTGTTTCTG--------CTATACA------------------------------------------------
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-CTCGGTATACAGGGCTCAATTTCCTAGATTTTGAGGCACAC--------------------------------------
-----------------------TTTTTTCCTGCAGCCATGCC-------------------------------------
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>chr2B_967
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------TCCCAGCCGACGAACTCATCTCCAAGCCTCAGCCATGGCCACGGAGCCGCGCTCAACGCCGCACCTCCTCGTCG
TCCCCTTCCCGGCGCAGGGCCACGCGCTGCCGCTGCTCGACCTGGCCGCGCTGCTCGCGTCCCGCGGCCTCCGCCTCACC
GTCGTCACCACGCCCGCCAACGCGCCGCTCCTCTCCCCTCTCCTCGCCGCCCACCCCGGCT---CCGTCCAGCCCCTCGT
CCTCCCCTTCCCCGCGCACCCCTCCCTCCCGCCGGGCCTCGAGAACACCAGGAGCTGCCCGCCCTCCTACTTCCCCGTCT
TCATCCACGCGCTCGCCGCGCTCCGCCAGCCCGTCCTCGCGTGGGCCAGGTCGAA---------CTCGCACCCCGTCGTC
GCCGTCGTGTCCGACTTCTTCTGCGGGTGGACGCAGCCCCTCGCGGCGGAGCTCGGCGTGCCCAGGATCGTCTTCTCGCC
CTCGGGCGTCCTCGGCACCGCCGTCCCGCACTCTCTGTTCCGTCGGCTGGTCAAGCGGCCGTCGGATGCCGATGACGGGT
TCGGCGTTTCGTTCCCGGCGATTCCCGGCGAGCCGGGGTTCCAGTGGAGAGAGCTTTCCGGGATGTACAGGGGCTACATG
GAAGGCAAGGTGGAGGAGCAGGTCGGCGAGGCCGTGAGGCAGAACTTCCTCTGGAATCTGGAGAGCTGGGGGTTTGTGTC
GAACACCTTCCGTGCGCTCGAGGGGAGGTACCTGGAGTCGCCGCTCGAGGACCTGGGGTTCAAGCGCGTGTGGGCGGTGG
GTCCGCTAGCGCCGGAGACGAGCAGCTCCGGAGATCGTGGCGGCGAGGCGGCTCTTGTCGCCGGCGATCTCGGGCCGTGG
CTGGACGGCTTCCCGCAAGGCTCGGTCGTGTACGTGTGCTTCGGCAGCCAGGCGGTGCTGACCCCGGCCGTGGCGACGGC
CCTAGCCGAGGCGCTGGAGCGGAGCGCCGTCCCGTTCCTGTGGGCCGCGGG---------CGACGGCGC---GGTGCTCC
CGGAAGGGTTCGAGGCCCGCGCGTCGGCGGCGAGGCGCGGGCTGGTGGTGCGCGGGTGGGCGCCGCAGGTGGCCATCCTG
CGGCACGCGGCGGTGGGGTGGTTCATGACGCACTGCGGCTGGAACTCGGTGCTAGAGTCGGCGGCGGCGGGCGTGCCCAT
GCTGGCGTGGCCGATGACGGCGGACCAGTTCGTGAACGCGCGGCTGCTCGAGGACGAAGCGCGCGTCGCGGTGCGCGCGT
GCGCGGGCGGGATCGGCGTGGCCCCGGACGCCGGCGAGCTCGCGGCCGTGCTGGCCGGCGCTGTCGGGGAGGGAGGGAGC
GCCGCGCGG----------GCGCGCGCCAAGGAGCTCGCGGCGGAAGCAGCCGGCGCGACCAAGGAAGGCGGGAGCTCGC
GCGAGGATCTGGAGCGGCTGGTGCTAGAGATTCAGAAGCTTTGAGCCTTTGAACGTGGCGCGATAGATTTTGGAGAACAT
TCACGGAGTTGTTTCTG--------CTATCCACTCGGTATCAAGGTTTTGATTACGGAATGAGGCAATTTTACCGAGGGG
GACTGATGAATGTGGTTACCACGGTTACCAAGAAATACCGAGAATATTTCGAATGGATTTTATAGTTGAATTTTGAATTC
AAATAAATGAATGAACGAACATTCGAACCATAGACCTCTCAAAAACAGGAACTGGGTTGCTACCAACATGTCAGAACCAA
CTCTCATGGCATTAATTAGATCCTACGTACTTTACTATAAATCAAGTGTTTAAATTCAAAAAATTGGTATTTTTTGCTCG
GTATGGGGATTTACCGAGGGGCACGGAAATACGCGGTAACCATGGGAAATCCTGATATTTCGACTGGTAACCAAAACCTT
GCTCGGTATACATGGCTCAGTTTCCTGCTCCCTCCGTCCGTAAGTAAGACGTTTTTTTGACACTACATTATGGGACAGAG
GGCATAGATTTTTTTGGCAAACTTTTTTCGCTGCAGCTATGCCGTTTATATGATATGAACAATCAAAATGGATTATGCAT
GCTTCATCGGTTCATCCTATTTATGGTTGCC---------CTGTTGTGACAGTTTGAAATATTTTCTTCAATTTTGTCGA
CATTTATC------------------------------------------------------------------------
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>chr7D_1023
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--------------------------------------------------------------CGCCCCACGTCCTGGTCG
TCCCGTACCCGGCGCAGGGCCACACGATCCCGCTCCTCGACCTCGTCGGCCTCCTCGCGGCCCGCGGGCTCCGCCTCACC
GTCGTCGCCACGCCCGGCACCGCGCCGCTCCTCGCGCCCCTCCTCGCCGCGCATCCGGGCGGCGCCGTCCGCGCGCTCAC
TCTCCCGTTCCCCTCCCACCCGGCCTTCCCCGCCGGCGTCGAGAGCGCCAAGGGGTGCCCGCCCGTGCTCTTCGGCGCGC
TCATCGTCGCCTTCGCGGGGCTCCGTGGCCCGCTCGGCTCCTGGGTGCGCGCCCGCGCGGGCACCCCGGACCGCGTCGTC
GCCATACTCTCCGACTTCTTCTGCGGGTGGACGCAGCCGCTCGCCGCCGAGCTCGGCCTCCCTCGCGTCGCGTTCTCGTC
CTCTGCTGCTTACGCCACCGCCGTGCTCCACTCGCTCCTGCGCCGGCTGCCCAGCCGCGAGGACGAGAGCGACGACGAGT
GCCCGATCGCCTTCCCGGATCTCCCGGGCGCCCCGGTGTACCCGTGGCGGCAGCTCAGCCTGCTCTACCGGACGTACAAG
GAGGGCGACGAGGTTACG---------GAGGGGGTCAGGAGGAACTTCCTCTGGAACCTGGATTGCTCGGCGTTCGTGTC
GAACACGTTCCGGCGGCTCGAGGGGCGGTACCTGGAGGCGCCTCCGGCGGACCTGGGCTTCCGGCGCGTGCGCGCGGTGG
GGCCGCTGGCGCCGGAGGCCGACGCCGCGGGCAACCGCGGCGGGGAGACGGCGGTGGCCGCGGCCGACCTGTGCGCCTGG
CTCGACAAGTTCGAGGACAGATCCGTCGTGTACATCAGCTTCGGGAGCATGGCGGTGCTGCAGCCAGCTCACGCGGCGGC
GCTGGCCGCCGCCCTGGAGAAGACAGGCGCGGCGTTCGTGTGGGCGGTCGG---------CCCT---GC---GACGCTCC
CGGACGGGTTCGAGGAGCGCGCGGCGGCGGGCGGCAGGGGCACGGTGATCCGCGGGTGGGCGCCGCAGGTGGCCGCGCTG
CGGCACCGGGCGGTGGGCTGGTTCGTGACGCACTGCGGGTGGAACTCGGTGCTGGAGTCCGCGGCGGCCGGGGTGACCAT
CCTGGCGTGGCCGATGACGTCCGACCAGTTCGTGAACGCGCGGCTGCTCGTGGAGGAGCTGCGCGCCGCCGTGC------
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>chr2A_1032
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-----------------------------------------------------------------------TCCTCGTCG
TGCCCTTCCCCGCGCAGGGCCACACGGTGGCGCTCCTCGACCTGGCGGCCCTGCTGGCCGCGCGCGGGCTCCGCCTCACC
GTCGTCACCACACCCGCCAATGCCTACCTGCTCTCGCCTCTCCTCGCCGCTCACCCCGACA---TGGTCCGGCCCCTCAC
GCTCCCCTTCCCCTCCCACCCTTCTCTCCCCGCGGGCCTCGAGAGCTTCCAGGACTGCCCTCCCACCTACGCCGCCGTCT
TCGTCCACGCTCTCGCCGCCCTCCACCACCCCATCCTCGCGTGGGCCAAGT---------------CGCACCCCGTCGCC
GCCATCCTGTCCGATTTCTTCTGCGGGTGGACGCAGCCTCTCGCTGCCGAGCTTGGCGTCCCGAGGCTGGTCTTCACGCC
TTCCGGCGTCCTCGGCACCGCCGTCCCGCATTCGCTCTTCCGCCGACTCGTCAAGCAGCGACCGT---CAGACGCCGACC
ACGTCGTTGCCTTCCCGGATATTCCTGGCGAGCCGGTGTATCAGTGGAAGGAGCTCTCCATCATGTACAGGATGTACGCC
GAAGGCCTCGTGGATGAAGAGTTCGGCGGGGCAGTGAGGCGGAACTATCTCTGGAACCTCGAGAGCTGGGGATTCGTGTC
CAACACGTTCCGTGCCCTCGAGGGGAGGTACCTGGACACGCCGCTCGGTGACCTGGGGTCAAGGCGCGTGTGGGCGGTGG
GACCGGTCGCGTCGGAGGCAGACGCCGCCGGCCAGCGCGGCGGGGAGGCGGCCGTCGCGGCCGGCGATCTCAGCGCGTAG
CTGGACGTGTTCCCGGAAGGTTCAGTCCTGTACGTGAGCTTCGGCAGCCTGGTGGTGCTGACCCAGCCAGCGGCCGCGGC
GCTGGCCGAAGCGCTGGAGCGGAGCACCGTCCCGTTCGTGTGGGTGGTGGGCGCCGGGAACGACGGCGG---CTTGGTCC
CACAAGGTTTCGAGGCGCGCGTGGCGGCGGCGGGGCGCGGGGTGGTAGTTCACGGGTGGGCGCCCCAGGTGGCGACGCTG
CGGCACGCGGCGGTGGGGTGGTTCATGACGCACTGCGGGTGGAACTCGGTGCTGGAGGCGGTGGCTGCGGGGGTGCCCAT
GCTGGCGTGGCCGATGACGGCCGACCAGTTCGTGAACGCGCGGCTGCTCGTGGAGGAAGCGGGCGTCGCCGTGCGCGCGT
GCGCGGGCGGGATCGGCGTCTGCCCGGACGCGGGCGAGCTCGCGGCCGTACTGGCGGACGCTGCCGGGGAGGGAGGGCGC
GAAGTGCGC----------GCACGTGCCAAGGAGCTGGCGGCGCAAGCGGCGGCCGCGGTGATGGAAGGTGAGAGCTCGC
GCCTGGACTTGGAGCGGTTGGTTCAAGAGATTCCGAAGCTTTGA------------------------------------
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>chr7B_1041
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TCCCGTACCCGACGCAGGGCCACACGATCCCACTGCTCGACCTGGCCGGCCTCCTCGCGGCCCGCGGGCTCCGCCTCACC
GTCGTCGCCACGCCCGGCACCGCCCCGCTCCTCGCGCCCCTCCTGGCCGCGCACCCGGGCGGCGCCGTCCGCGCGCTCAC
CCTCCCCTTCCCCTACCACCCGGCCTTCCCCGCCGGCGTCGAGAGCGCCAAGGGGTGCCCGCCCGTGCTCTTCGGCGCGC
TCATCGTCGCCTTCGCGGGGCTCCGCGGCCCGCTCGGCTCCTGGGTGCGCGCCCGCTCGGGCACCCCGGACCGCGTCGTC
GCCATACTCTCCGACTTCTTCTGCGGGTGGACGCAGCCGCTCGCCGCCGAGCTCGGCCTCCCTCGCGTCGCGTTCTCGTC
GTCTGCCGTGTACGCCACCGCCGTGCTCCACTCGCTCCTGCGCCGGCTGCCCCGGCGCGAGGACGAGAGCGACGACGAGT
GCCCGATCGCCTTCCCGGATCTCCCGGGCGCCCCGGTGTACCCGTGGCGGCAGCTCAGCTTGCTCTACCGGACGTACAAG
GAGGGCGACGAGGTTACA---------GAGGGGGTCAGGAGGAACTTCCTCTGGAACTTGGATTGCTCGGCGTTCGTGTC
GAACACGTTCCGGCGGCTCGAGGGGCGGTACCTGGAGGCGCGTCTCGCGGACCTGGCCTTCCGGCGCGTGCGCGCGGTGG
GGCCGCTGGCACCGGAGGCCGACGCCGCGGGCAACCGCGGCGGCGAGACGGCGGTGGCCGCGGCCGACCTGTGCGCCTGG
CTCGACAAGTTCGAGGACAAGTCCGTCGTGTACATCAGCTTCGGGAGCATGGCGGTGCTGCAGCCGGCTCACGCGGCGGC
CCTGGCCACCGCCCTGGAGAAGACAGGCGCGGCGTTCGTGTGGACGGTCGG---------GCCG---GCGGTGACGCTCC
CGGACGGGTTCGAGGAGCGCGCGGCGGCGGGCGGCAGGGGCATGGTGATCCGCGGGTGGGCGCCGCAGGTGGCCGCGCTG
CGGCACCGGGCGGTGGGCTGGTTCGTGACGCACTGCGGCTGGAACTCGGTGCTGGAGTCCGCGGCGGCCGGGGTGACCAT
CCTGGCGTGGCCGATGACGTCCGACCAGTTTGTGAACGCGCGGCTTCTCGTGGACGAGCTGCGCTCCGCCGTGCCCTTCT
GCTGGGGCGGCGTCGCCACGGCGCCGAGCGCCGACGAGCTGGTGCGCGTGCTCGAGTCGACCGTC-GTGGGGAAGGGGCC
GGAGTGGGTCGACGTGGCCGCGCGGGCCAAGGAGCTTGCCGAGGAGGCGGCGGCCGCGGTGCGCGAAGGCGGCAGCTCGT
GGCGGGAGGTGGAGGAGCTGGCGCGGGAGCTTCGCGAGCTCGGAGCCT--------------------------------
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>chr2D_2857
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-----------------------------------------------TGTTTATTAGAGCATCTCCAACAGCCGCCGAAC
G--CGCCGCGCGCTAAAAACTATTTTGCCGCGCGCCCATTTCTTGATTTGGCGCGGCGCGCAGCGCTGGCTCTAGTAGCC
GCGCTAAAATGCA--GCGCGC--GCGCAGCTCCAGCAGTGCGCAAAAATGCAGCGC--GCGCGACTCTCGCACAAACAAC
ATATGCATTCCAAAACAGAAACAAAAAGATCAAACACAAACAAAAATAAATCAAAATAAATAGTTCAATTTTGTTATTAC
AACTCAAACA----AACAGTTTATCGTTCAATACAACAAATAGTGCAATAAACACAACAAATAGTTCAACAATACAATAT
CGAACGCACAAATCATGATGCTCTTTGTCGTCCATTTCATGTCCACCACTCCTCAATGAGATCCTTCTGAAGATCATTAT
GCGCTGCGGGACGTCGAATGGCATGATAGGAGGCAACAAAACGGGCCACCCTTTCAGCCCTCCGTCGCACTCGCACGGGA
TGTCCCAAGAGCTCATACTGAGAGTAGTCTACATCTTGGCCACGCTCATT
>chr3D_2863
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-----------------------------------------------------TAAGAGCATCTCCAACAGCCGCCGAAC
G--CGCCGCACGCTAAAAACTACTTTGCCGCGCGCCCATCGCCTGATTTGGCGCGACGGGCAGCGCTGGCTCCAGCAGTC
GCGCTAAAATGCA--GCGCGTTT--GCAGCTCCAGCAGTGCGCAAAAATGCAGCGC--GCGCGACTCTTGCACAAACAAC
ATATGCATTCCAAAACAGAAGAAAAAAGATCAAACACAAACAAAAATAAATCAAAATAAATAGTTCAATTTCGTTATTAC
AACTCAAACAAAC----AATTTATCGTTCAATACAACAAATAGTGCAATAAACAGAACAAATAGTTCAACAATACAATAT
CGAACGCACAAATCATGATGCTCTTTGTCGTCCATTCCATGCCCACCACTCCTCAATGAGATCCTTCTGAAGATCATTAT
GCGTTGCGGGACGTCGAATGGCATGATAGGAGGCAACAAAACGGGCCACCCTTTCAGCCCTCCGTCGCACTCGCACGGGA
TGTCCCAAGAGCTCATACTGAGAGTAGTCTACATCTTGGCCACGCTCATT
>chr7D_2863
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-----------------------------------------------------TAAGAGCATCTTCAACAGCCGCCGAAC
G--CGCCGCGCGCTAAAAACTACTTTGTCGTGCGCCCATCGCCTGATTTGGCGCGGCGCGCAGCGCTGACTCCAGCAGCC
GCGCTAAAATGCA--GCGCGCACGCGCAGCTCCAGTAACGCGCAAAAATGCAGCGC--GCGCGACTCTCGCACAAACAAC
ATATGCATTCCAAAACAGAAGCAAAAAGATCAAACACAAACAAAAATAAATCAAAATAAATAGTTCAATTTCGTTATTAC
AACTCAAACAAAC----AGTTTATCGTTCAATACAACAAATAGTGCAATAAACACAACAAATAGTTCAACAATACAATAT
CGAACGCACAAATCATGATGCTCTTTGTCGTCCATTCCGTGCCCACCACTCCTCAATGAGATCCTTCTGAAGATCATTAT
GCGCTGCGGGACGTCGAATGGCATGATAGGAGGCAACAAAACGGGCCACCCTTTCAGCCCTCCGTCGCACTCGCATGGGA
TGTCCCAAGAGCTCATACTGAGAGTAGTCTACATCTTGGCCACGCTCATT
>chr7D_2863
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-----------------------------------------------------TAAGAGCATCTCCAACAGCCGCCGAAC
G--CGCCGCACGCTAAAAACTACTTTGCCGCGCGCCCATCGCCTGATTTGGCGCG-------GCGCTGGCTCCAGCAGCC
GCGCTAAAATGCA--GCGCGC--GCGCAGCTCCAGCAATGTGCAAAAATGCAGCGC--GCGCGACTCTCGCACAAACAAC
ATATGCATTCCAAAACAGAAGCAAAAAGATCAAACACAAACAAAAATAAATCAAAATAAATAGTTCAATTTCATTATTAC
AACTCAAACAAAC----AGTTTATCGTTCAATACAACAAATAGTGCAATAAACACAACAAATAGTTCAACAATACAATAT
CGAACGCACAAATCATGATGCTCTTTGTCGTCCATTCCATGCCCACCACTCCTCAATGAGATCCTTCTGAAGATCATTAT
GCGCTGCGGGACGTCGAATGGCATGATAGGAGGCAACAAAACGGGCCACCCTTTCAGCCCTCCGTCGCACTCGCACGGGA
TGTCCCAAGAGCTCATACTGAGAGTAGTCTACATCTTGGCCACGCTCATT
>chr1D_2863
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-----------------------------------------------------TAAGAGCATCTCCAACACGCGCCGAAC
G--CGCCGCGCGC-AAAAACTGCTTTGCCGCGCGCCCATCGTCTGGTTTGGCGCGGCGCGCAGCGCTGGCTCCAGCAGCC
GCGCTAAAAAGCA--GCGCGC--ACGCCGCTCCAGCAGCGCGCAAAAATGCAGCGC--GCGCGACTCTCGCACAAACAAC
ATATGCATTCCAAAATATAAGCAAAAAGATCAAACACAAACAAAAATAAATCAAAATAAATAGTTCAATTTCGTTATTAC
AACTCAAACAAAC----AGTTTATCGTTCAATACAACAAATAGTGCAATAAACACAACAAATAGTTCAATAATACAATAT
CGAACGCACAAATCATGATGCTCTTTGTCGTCCATTCCATGCCCACCACTCCTCAATGAGATTCTTCTGAAGATCATTAT
GCGCCGCGGGACGTCGAATGGCATGATAGGAGGCAACAAAACGGGCCACCCTTTCAGCCCTCCGTCGCACTCGCACGGGA
TATCCCAAGAGCTCATACCGAGAGTAGTCTACATCTTGGCTACGCTCATT
>chr2D_2865
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-------------------------------------------------------AGAGCATCTCCAACAGCCGCCGAAC
G--CGCCGCGTGGTAAAAATTACTTTGCCGCACGCCCATCGCCTGATTTGGCGCGGCGCGCAGCACTGGCTCCAGCAGCC
GCGCTAAAATGCACCGCGCGC--GCGCAGCTCCAGCAGTGCGCAAAAATGCACAGC--GCGCGACTCTCGCACAAACAAC
ATATGCATTCCAAAACAGAAGCAAAAAGATCAAACACAAACAAAAATAAATCAAAATAAATAGTTCAGTTTCGTTATTAC
AACTCAAACAAAC----AGTTTATCGTTCAATACAACAAATAGTGCAATAAACACAACAAATAGTTCAACAATACAATAT
CGAACGCACAAATCATGATGCTCTTTGTCGTCCATTCCATGCACACCACTCCTCAATGAGATCCTTCTGAAGATCATTAT
GCGCTGCGGGACGTCGAATGGCATGATAGGAGGCAACAAAACGGGCCACCCTTTCAGCCCTCCGTCGCACTCGCACGGAA
TGTCCCAAAAGCTCATACTGAGAGTAGTCTACATCTTGGCCACGCTCATT
>chr4D_2865
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-------------------------------------------------------AGAGCATCTCCAACAGGCGCCGAAC
G--CGTCGCGCGCTAAAAACTGCTTTGCCGCGCGCCCATCGCCTGGTTTGGCGCGGCGCGCAGCGCTGGCTCCAGCAGCC
GCGCTAAAAAGCA--GCGTGC--GCGCAGCTCCGGCAGTGCGCAAAAATG--CAGC--GCGCGACTCTCGCACAAACAAC
ATATGCATTTCAAAACAGAAGCAAAAAGATCAAACACAAACAAAAATAAATCAAAATAAATAGTTCAATTTCGTTATTAC
AACTCAAACAAAC----AGTTTATCGTTCAATACAACAAATAGTGCAATAAACACAATAAATAGTTCAACAATACAATAT
CGAACGCACAAATCATGATGCTCTTTGTCGTCCATTCCATGCCCACCACTCCTCAATGAGATCCTTCTGAAGATCATTAT
GCGCTGCGGGACGTCGAATGGCATGATAGGAGGCAACAAAACGGGCCACCCTTTCAGCCCTCCGTCGCACTCGCACGGGA
TGTCCCAAGAGCTCATACTGAGAGTAGTCTACATCTTGGCCACGCTCATT
>chr7D_2865
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-------------------------------------------------------AGAGCATCTCCAACAGCCGCCGAAC
G--C--CGCGCGCTAAAAACTACTTTGTCGCACGACCATCGCCTGATTTGGCTCGGCGGGCAGCGCTGGCTCCAGCACCC
GCGCTAAAATGCA--GCGCGC--GCGCAGCTCCAGCAGTGCGCAAAAATG--CAGCGCACACAACTCTCGCACAAACAAT
ATATGCATTCCAAAACAGAAGCAAAAAGATCAACCATAAACAAAAATAAATCAAAATAAATAGTTCAATTTCGTTATTAC
AACTCAAACAAAC----AGTTTATCGTTCAATACAACAAATAGTGCAATAAACAGAACAAATAGTTCAACAATACAATAT
CGAACGCACAAATCATGATGCTCTTTGTCGTCCATTCCATGCCCACCACTCCTCAATGAGATCCTTCTGAAGATCATTAT
GCGCTGCGGGACATCGAATGGCATGATAGGAGGCAACAAAACGGGCCACCCTTTCAGCCCTCCGTCGCACTCGCACGGGA
TGTCCCAAGAGCTCATACTGAGAGTAGTCTACATCTTGGCCACGCTCATT
>chr4B_2865
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-------------------------------------------------------AGAGCATCTCCAACAGCCGCCGAAC
GTGC--CGCGCGCTAAAAACTACTTTGCCGCGCGCCCATCATCTGATTTGGCGCGGCGTGCAGCGCCAGCTCCAGCAGCC
GCGCAAAAATGCA--GTGCGC--GCGCAGCTCCAGCAGTGCGCAAAAATG--CAGCGCGCGCGACTCTCGCATAAACAAC
ATATGCATTCCAAAACAGAAGCAAAAAGATCAAACACAAACAAAAATGAATCGAAATAAATAGTTCAATTTCGTTATTAC
AACTCAAACAAAC----AGTTTATTGTTCAATATAACAAATAGTGCAATAAACACAACAAATAGTTCAACAATACAATAT
CAAACGCACAAATCATGATGCTCTTTGTCGTCCATTCCATGCCCATCACTCCTTAATGAGATCCTTCTGAAGATCGTTAT
GCGCTGCGGGACGTCGAATGGCATGATAAGAGGCAACAAAACGGGCCACCCTTTCAGCCCTCCATCGCACTCGCACGGGA
TGTCCCAAGAGCTCATACTGAGAGTAGTCTACATCTTGGCCACGCTCATT
>SNPs
S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------SSSSSS
SSSSSS------------------------------S-------S-------------------------------S---
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--------------------------------S-----------------------------------------------
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--------------------------------------------------------------------S-----------
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----------S---------------------------------------------------------------------
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----------------------------------------------------------------S---------------
-----------------SSSSSSSS-------------------------------------------------------
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----SS-------S------------------------------------------------------------------
--------------S----S-S-----------------------------SSS--S-------S---------------
-------------------------------SSSSSSSSS----------------------------------------
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-------S----------S-------S
----------------------------------S---------------------------------------------
----------------------------S---------------------------------------------------
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-------------S------------------------------------------------------------------
----S---------------------------------------------------------------------------
------------------------------------------------------S-------------------------
------------------------S-------------------------
>forward_886
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------------------------------------------------------------------CGTGTGTGTGCTGA
GGAGAT--------------------------------------------------------------------------
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>reverse_3301
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--------------------ATGGGAGCCGTTTGGATGTT----------------------------------------
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--------------------------------------------------
