>input_sequence_52338
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--------------------------------------------------------------ATGGCTCTTGCTCTAGCA
CGCCGCCTACTCATGGTGCTGCTCCTCGCGGGCACCCGCGTCGCAGCGCCGCCGCCGCA---GCAGGTCTCACCTTCGGA
GGAAACGGTGGGCGGCATCACGGCCATGTACAACTTCGGGGACTCCATCTCGGACACGGGGAACCTCCTCCGGCAAGGCG
ACACCGGAATACTGCGTTACACTACGGGCCTTCCCTACGGCGTCACCATCGGCCGCCCCACCGGCCGTTGCTCCGACGGC
TTCCTCATGATCGACTTCCTTGGTACAT------GTCCATTTGCCGG---CTAGTAAA-ATGCATGCTAGGCTGCTAGCT
CTCTACTGTCTTTAAACGAGCGAGCATTTGTGGTTGTGCGCAGCTGAAGGTCTCGGCCTCCCGCTGCTCAACCCATACCT
GGACAGGCGCGCGGATTTCACGCACGGTGTCAACTTCGCCGTAGCCGGAGCCACCGCGCTCAGCACGACGGCACTGGCCA
ACAGGGGGGTCACCGTCCCCCACACCAACAGCTCCCTTGGAGTTCAGCTCAGATGGTTCAAGGAGTTCATGAGCTCCACC
ACCAACTCCCCTCGAGGTC------TACTGCCATTCACCTTCTCATTAAGCTACTGCAATTAACTTGCCACCAAATCACA
AATTAAGCTGATGCAAAAA-GTTAACTTTGTACTGCAGAGATACGGAAAAAACTGGCGAGTTCACTGGTGATGCTGGGGG
AGATCGGCGGAAACGACTACAACTACGTCTTCCTACAGCGCCGAGGGACGAATGGTAGATATGACCCGATCAGCAATGCT
ACCCGCAGCGCGGAGAGCTTGGCGCACGCCCTCGCGCTCGTACCCGAGGTCGTGCAATCCATAGCAGACGCAGCCAAGGA
GGTGCTGGACATGGGCGCCACGAGAATGGTCATCCCGGGCAACTTCCCCATCGGGTGCTTGCCGAGCTACCTGAGAGCGG
CGACGGCGTCGAGACCCGCATCGCTGCGCGACGGCGACGGCTGCCTCGTCTCCTTCAACGTCCTGGCGCGCGCGCACGAC
GAGCGCCTGCGCCACGCCATCGGCGAGCTGCGGCGGTCGTACCCTGACGCGACGGTGGCCTACGCCGACTACTTCGCCGC
CTACCTCGAGATCCTTCGCCACGCGCCGCGGCTCGGCTTCGAGGGCGGCGCGGCCCTGCGTAGGGCGTGCTGCGGCGCAA
GCGGCGGCGCTTATAACTTTGATAGTAATAGGCTGTGTGGCGCGCCGGGGACGACGGTGTGCGCGGACCCGAGCAGGCGT
CCAAGCTGGGACGGCATCCACCTCACGCAGCATGGTTACCGCGTCATGACCGAGCTGCTGTATCGCCGAGGGCTCGCGTG
CCCGGCTGCGGTGAAACTCCCGCGCCAGAAGCCTTGCCCGCCCGTCAGTTGA----------------------------
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>chr1B_1_TraesCS1B01G261200
GCTTTTGTATCCTATTCCAATTCTAGTTGC-----------ATACACGTGACATTCCAATGTCCAATACGTAGGTACATA
TTACATGCTAACATGCTAACGTAAAAACTTTAAATCTCAACCTTTATTATTCTGATCAAATGGTGCA-------------
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-AATAATATAGCATATGTGAACGAACGTGATAGCTCGTTTATCGCTTGTCTTATAAGTATATAAGTATATAATAGATAGA
TAGA-TTAAGTTTCATTTAATATCGAGTGTTATATTCTTTTTTAAAAATTGTTCAGGTACATGTTTATGAGTTGTTTGAC
TGTTTTACTTTTTCTAGTAGCTT---TTTTAACATAATAAAGACATAAGCGCTCATACGTATGCGCATACGCACACCTCT
ATGAATGCACACATACTCTGTCC----TTAAGAGCACCTTCGACAAACTGAGTCGGCATATCATCTTGAGGTTTACAAAG
TCATCATAGGCGCCTCATAGTCGACAGGAACGTCTCCTTTCATTAAAACCGCATCGCCGGAAATTCTAAAATAAATCCAG
AAATAATGCGAGCAACAGGACTTGAACCCTGATGGGCTGGGAATATCACTGTCCCTCTCACCATTCAATGCATGGTCGTC
TATTCTTTAAAACTGCGTGACGTAAAAATTCAAAAAGAAAAAGGGTCTGTCCACTGTGTTTGTGGTTTATTTTTTTTGTC
CCAGTTTTTTTGTTCCTTGTTGTTGCGTGATGTGACATCTTTAGAAAACATCTACACGTGAATTAGACAAACCGAAAGCG
TGCGTATGCGCCGCCCGCCAGAAAT-------------------------------------------------------
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---------AACAAAAATTCATCAGTAGGTCAAGGGGCTTGGTGTGAGCGACTTATTGCGCCGGCTGCTGGCGCTGCCGT
TCCAAATGCTCATAGCTACCAACTGTATCTGTGTATTTCTGTGAGGACAGAGGGACATG--CACTAGCTTTGCGTACCGC
ACTCGTGTATATATGTATGGA---TCGGCTCGTTCCGGGGGTACGAAGAGGACACATTATCCATGGCTCTTGCTCTAGCA
CGCCGCCTACTCATGGTGCTGCTCCTCGCGGGCACCCGCGTCGCAGCGCCGCCGCCGCA---GCAGGTCTCACCTTCGGA
GGAAACGGTGGGCGGCATCACGGCCATGTACAACTTCGGGGACTCCATCTCGGACACGGGGAACCTCCTCCGGCAAGGCG
ACACCGGAATACTGCGTTACACTACGGGCCTTCCCTACGGCGTCACCATCGGCCGCCCCACCGGCCGTTGCTCCGACGGC
TTCCTCATGATCGACTTCCTTGGTACAT------GTCCATTTGCCGG---CTAGTAAA-ATGCATGCTAGGCTGCTAGCT
CTCTACTGTCTTTAAACGAGCGAGCATTTGTGGTTGTGCGCAGCTGAAGGTCTCGGCCTCCCGCTGCTCAACCCATACCT
GGACAGGCGCGCGGATTTCACGCACGGTGTCAACTTCGCCGTAGCCGGAGCCACCGCGCTCAGCACGACGGCACTGGCCA
ACAGGGGGGTCACCGTCCCCCACACCAACAGCTCCCTTGGAGTTCAGCTCAGATGGTTCAAGGAGTTCATGAGCTCCACC
ACCAACTCCCCTCGAGGTC------TACTGCCATTCACCTTCTCATTAAGCTACTGCAATTAACTTGCCACCAAATCACA
AATTAAGCTGATGCAAAAA-GTTAACTTTGTACTGCAGAGATACGGAAAAAACTGGCGAGTTCACTGGTGATGCTGGGGG
AGATCGGCGGAAACGACTACAACTACGTCTTCCTACAGCGCCGAGGGACGAATGGTAGATATGACCCGATCAGCAATGCT
ACCCGCAGCGCGGAGAGCTTGGCGCACGCCCTCGCGCTCGTACCCGAGGTCGTGCAATCCATAGCAGACGCAGCCAAGGA
GGTGCTGGACATGGGCGCCACGAGAATGGTCATCCCGGGCAACTTCCCCATCGGGTGCTTGCCGAGCTACCTGAGAGCGG
CGACGGCGTCGAGACCCGCATCGCTGCGCGACGGCGACGGCTGCCTCGTCTCCTTCAACGTCCTGGCGCGCGCGCACGAC
GAGCGCCTGCGCCACGCCATCGGCGAGCTGCGGCGGTCGTACCCTGACGCGACGGTGGCCTACGCCGACTACTTCGCCGC
CTACCTCGAGATCCTTCGCCACGCGCCGCGGCTCGGCTTCGAGGGCGGCGCGGCCCTGCGTAGGGCGTGCTGCGGCGCAA
GCGGCGGCGCTTATAACTTTGATAGTAATAGGCTGTGTGGCGCGCCGGGGACGACGGTGTGCGCGGACCCGAGCAGGCGT
CCAAGCTGGGACGGCATCCACCTCACGCAGCATGGTTACCGCGTCATGACCGAGCTGCTGTATCGCCGAGGGCTCGCGTG
CCCGGCTGCGGTGAAACTCCCGCGCCAGAAGCCTTGCCCGCCCGTCAGTTGACGCGGGTCGTCACGTTTGTTGGCGGTTT
GGGCCTCCGACTGGTGTAGCCACATTGTACGTAC----------------------------------------------
-------------GAGCTGCTTCTTTGTCTCAAAAAAAAAACAGAGCTGTTTT--TGAAT--------------------
----------------------TTGTGAAAGCTCTGCTTCACCTGTCTCTGTTCAGTTACGCAGCTGCATGCGTACCGTT
TATTCGTTCAATACGCTGTTGTATAAATGGAGCCCGGAAGTAGTAATATTTGCCAGATTTTGCATGACCAACGTTATATA
TTTGCCAGATTTTGTACAGAGTGCGACAGTCCCACAAATTAGAGAATAA----TACTACTCGACATGTTATGTAATCGTC
ACAACCACC-GGCCGGAGACAAATTCACCGCAAGCGCACACAAACCCTGACAACCCCGACGCAGTAGCACATATAATCCG
CATATATTCACATCACACGCACACACGCACTCACGCACGCACTCGCAAACCAATAATCCTTGTCAA---------GATGA
TGCTGCACCTTCAAATAGACCACACTCCATCGACGGCCTGCCCGCGTCGACCGATCAGACCCT---TGCTCTGATTCCCA
TAGGCGTCTGAACGATGGCCGCGTTCGCCCCGGCGTGCAGCGACCCGACGCAGAGCAGCTGCGTCCCCGCCAGGATGATC
GTGAACGTCTCCAGCGCGCGCTGCACAC--ACAGACGAGCCGCGTTAGCTAGGTTACACATGGACAAGAGATGGACACGA
CAGATTCTCCATTGATTTACTCGTGCTTAATTACCAGGCTCGGGGGCCTCCAGCCGATGCTGATCTCCTTGCACCCCAGT
CCCATGGCGAGGAGGGTGAGGGTCCAGGTGACGAGGGCGGAGGCGGCGGCGGACATCATGCTGGCGGGGTAGCCCTCGGT
GACGTCGCGCAGGCCTGTGAGCGAGGTGGAGATGCCGACCGCGCCGGCCAGGAGCGCGAAGATGACGAAGAACCCCGTCG
CCAGGTTGCCCATCGGGAAGTAGATCGGGAACAGGCGCACCGGCGGCGACGCGC
>chr1D_1
GCTTTTGTATCCTATTCCAATTCTAGTTGCCTTATACATGCATACACGTGACATTCCAATGTCCAATACGTAGGTACATA
TTACGTGCTAACATGTTAATTTAAAAACATTAAATCTCAACCTTTATTATTTTGATCAAGTGGTGCTTTTTTTTGCGGGA
AATTTTCCGATCTATTCATTTTCAATCAAGGCAGTACAACGAATACCAAAAATAATAAAAAATTATATCCAGATTCGTAG
ACCACCTAGCGACGACTACAAGCACTGAAGCGAGTCAAAGGCGCCCGCCCGTCATCGCCTCTCTATCGTCGGAGTCGGGC
ACAACTTGTTGTAGTAGACAGTCGGAAAGTCGTCGTGCTAAGACCCCATAGGACCAGCGCACCAGAATAGCAACCGCCGC
AGATGAAGAATAACGTAGATCGGAAGGATCCAATCCGAAGACAAATGAACGTAGACGAACACCAACGAGATCCGAGCAAA
TCCACCAAAGATAGATCCGCCGGAGACACACCTCCACACGCCCACCAACGATGCTAGACGCACCACTGGAACGAGGGCTA
GGCGGAGAGACCTTTATTCCATCTTCAGGAAGCCGCCGCCGTTTCGCCTTCCTGAGCAGAACACAAACCCTAATAAAACT
AGAAGGAACGACTAAAAACGAAGCCCTCCCGCCGGCCCTTGGCAGGATCCACCGCGCCTCCATGGCCCTGGGGCCACCGG
AGACGAGGCAAACCTGCGTTGGAGCCAGCGAGAGGCAGAAACCCTAGCTACTTTTTTTTAGGAGGAGGAAGAGGCGGTGC
TAATAATATAGCATATCTGAACAAACGTGATAGCTCATTTGTCTCTTGTCTTATAAATATATAAGTATATAACAGATAGA
TAGATTTAAGTTTCATTTAATATTGAGTGTTATATTCTTTTTAAAAAATTGT--------ATGTTGAGGAGTTGTTTGAC
TGTTTTACTTTTTAAAGTAGGTTTTATTTTAACATAGTACAGACGCGAGCGCTCAAACATATGTGCATACATTTACCTCT
ATGAACGCACACACACGCACACTACCATTATGAGCACCTTCGACAGACTAAGCCGGCATATCATCTTGAGATTTACGAAG
TCACCGTAGACGCCTCGTAGTCGACGAGAACGTCTCCTCCCACTAAAATCGCATCGCCGAAAATCCTGAAATAAATCCAG
GAATAATGCGGGCACCAGGACTTGAACCCTGGTGGGCTGAGGATACCACTGTCCCTCTGACCATCCAATGCATGGTCATG
TATTCATTAAAACTGCGTG-CGAAAAAATTCAAAAGGAAAAA--------------------------------------
---------------------------------------------------------------------------AAGCA
TGCATATGCGCCGCACGTGAGAAATCTATATCTATATCTATACCTACTAATAAAGCAAGGTGTGTTTCTCCGATTTTTCA
TCCGTTCACCGCAAATAGATTATTATTTTTCTATCCGAGGTGGTACTAAACTTTCTATGTTCGTCTATTACCAAACGAAA
AACAATTTGTGCAGAATTTCGTACATGGGCCGCGCACACTATGGCCCCGTAAAGTCAGCCCATTTTTTCTGCCATATAGC
AATAAAAAATCCTATTTCCCGCTCAAGGTAGTAAATAGTTTCAGGTACGCACAGGGCGCCCAAAACTCAGCGGCCCATTT
ATGCTTGGGTTCTGTTTCCATTTTTCTTTTTCTGTTCCGTTCTCTTTTTGTTTTCTATTTCTTTTATATTTTTCTGATCC
TAAGTCTATTTTTTACCTTTTTCTCTCAAATTCCAAATCTTCAAAAATGCTCGCAATTTCATTTTTATTCAAAAATTCAT
AAAAAATTACGAATTACATAAATGTGTTCCTATTATAAAAAATGTTTGGATTTTTTTATTGTGCCAAAAAAATTTCAAAA
TTTAGAAAATATTCCCACTTGTTCAAAAATGACTGCATTTTTAAAAAAATCAATAATTAGAAACATGCATTTTAAAAATG
TTCCAAATTCGAAAAATATGCTTGTGTTCTGTTTCCATTTTTCTTTTTCTGTTTTGTTCTCATTTTGTTTCCTATTTCTT
TTTTATTTTTCCCATTCTAAGTCTATTTTTTACTTTTTTCTGAAATTCAAAATATTCGAAAAATGTTCGCAATTTCTTAT
TAATAAATTCATAAAAAAATACGAATTACATAAATGTGTTCCTATTATAAAAATTGTGTGGATTTTTTGGTTGTGCCAAA
AAAATTCAAATTTAAAAAATATTCCCTTTTGTTAAAAAATGACTGTATTTTAAAAAAACAATATTTGGAAAAAAAATGCA
TTTAAAAAATGTTCCAAATTCGAAAAATATTTTTGTTTTCGCGACATGTTCAAAAATTGAAAATATTTTTTTCATTAAAG
AAAAAAATTACTAAAACTCTTCTGAATCTTCAAAACATGTTCCTATTTTTAAAAATTGTTCACAACTTAAAAAATGTTCG
TAGTTTTATAAAAGGTTCATGTTTTTAAGAAATATTTGTGAATTTCAGGAAATGTTCCATTCAAGTTTTTTATTCTTGCT
TTGTCCAAAAATGTATGGAATTTTCAAAAAAGCATATGTTCGTAATTTGGAAAATGTTCACGTTGACAAGTATATTTGGC
AGTACATAGTTATCAGTTTTTGAAAAGTTCAAAAAAAAAATTTCGACGTTGCATTATATTCTTTAATATTCACGCTGACC
ATTGGTTAACAGGACGCGTTTATTTGAGTGGCTAGCGACATGTGGTCTTGTCTTTGTGGTCGTGAGTTCGATCACTCCCA
TACTGGGCTTGCTCCGCATCCGGCACATCGAGGTAAGTTGGCTTGTTCAAAATAAAGGACAGCATAACTTATTGACTTCC
ATGTGCCAATAAAAAAGAATATGATGGTAATTATAATTGAAAGAAATTGTGGGCACGTGCCAATACAAGAGAATACGGAC
ATGTGGGGGTCTTGATCCATTCTTATAATGAGCTAGAGGCATGCAATTTTATTATCCCGTTGCAAAGCACGGGCATGTGT
GCTAGTAACAACAAAAATTCATCAGCGGGTCAAGGGGCTTGGTGTGAGCGACTTATTGCACCGGCTGCTGGCGCTGCCGT
TCCAAATGCTCATAACTACCAACTGTATCTGTGTATTTCTGTGAGGACAGAGGGACATGCACACTAGCTTTGCGTACCGC
ACTCGTGTATATATGTAGGGA---TCAGCTCGTTCTTGGGGTACGAAGAGGACAAATAATCCATGGCTCTTGCTCTAGCA
CGCCGCCTACTCATGGTGCTGCTCCTCGCGGGCACCGGCGTCGCAGCGCCGCCACCGCCGCCGCAGGTCTCGCCTTCGGA
GGCAACGGTGGGCGGCATCACGGCCATCTACAACTTCGGGGACTCCATCTCGGACACGGGGAACCTCCTCCGGGAAGGCG
ACACCGGAATACTGCGTTACACCACGGGCCTTCCCTACGGCGTCACCGTCGGCCGCCCCACCGGCCGTTGCTCCGACGGC
TTCCTCATGATCGACTTCCTTGGTACAT------GTCCATTTGTTCTTCAAGAAATGAGATGCACGCTTGCTCTTTAATA
TCGA----TCTTTGAACGAGTGAGCATTTGTGGTTGT--GCAGCTAAAGATCTCGGCCTCCCGCTGCTGAACCCATACCT
CGACAGGAGAGCGGATTTCACGCACGGCGTCAACTTCGCGGTCGCCGGAGCCACCGCGCTCAGCACGACGGCACTGGCCA
ACAGGGGGATCACCGTCCCCCACACCAACAGCTCCCTTGGAGTCCAGCTCAGATGGTTCAAGAAGTTCATGAGCTCCACC
ACCTACTCCCCTCGAGGTAGCGCGTTACTGCCCTTCACCTTCTCATCATGCTA-----ATTAACTTGCCACCAAAGCACA
AATTAAGCTGATGCAAAAAGGTTAACTTTGTATCGCAGAGATACGGAAAAAACTAGCGAGTTCACTGGTGATGCTGGGGG
AGATCGGCGGAAACGACTACAACTACGTCTTCCTACAGCCCCGGCGGACGAACGGTAGATACGACCCGATCAGCAATGCC
ACCCGCAGCGCGGAGAGCTTGGCACACGCTCTCTCACTCGTACCCGAGGTCGTGCAATCCATAGCAGATGCAGCCAAGGA
GGTGCTGGACATGGGCGCCACGAGAATGGTCATCCCGGGCAACTTCCCCATCGGGTGCTTGCCGAGCTACCTGAGCGCGG
CGACGGCATCGAGCTCCACATCGCCGCGCGACGGCGACGGCTGCCTTGTCTCCTTCAACGTCCTGGCGCGCGCGCACAAC
GAGCGCCTGCGCCGCGCCATCGGGGAGCTGCGGCGGTCGTACCCGGACGCGAAGGTGGCCTACGCCGATTACTTCGCCGC
CTACCTCGAGATCCTCGGCCACGCGCCGCGGCTCGGCTTCGAGGGCGGCGCGGCCCTGCGTAGGGCGTGCTGCGGCGCGG
GCGGCAGGGAGTATAACTTTGACAACAACAGGCTGTGCGGCGCGCCGGGGACGACGGTGTGCGCGGACCCAAGCAGGCGT
CCCAACTGGGACGGCATCCACCTCACGCAGCATGGTTACCGCGTCATGACCGAGCTGCTGTATCGCCGAGGGCTCGCGTG
CCCGGCTGCGGTGAAACTCCCGCGCCAGAAGCCTTGCCCGCCCGTCAGTTGATGCGGGTCGTCACGTTTGTTGGCGTTTT
GGGCCTCCGTCTGATGTAACCACATTTGGGCGAGCGAACTCGTGGTCGTGGGTGTCCAACGCAAGCAGAGCTGCTTCTTT
GTCTAAAAAAACAGAGCTGCTTGTGTTCCTCAAAAAAAAAAAACAGAGCCGCTTCTGAAT--------------------
----------------------TTGTGAAAGCTCTGCTTCATCTGTCTCTATTCAGCGACCCAGT----TGCGTACCGTT
TAATCGTTCAATACGCTGTTGTATAAATGGAGCCCAGAATTAGTAATGTTTGCCAGATTTTGCATGAACAACGTTATATA
TTTGCCAGATTTTGTGCAGAATGCAAGAGTCCCACAAATTAGAGAATAA----TACTACTCGACATATTATGTGATTGTC
ACCCCCACCGGGCCGGAGACAATTTCACCGCAAGCGCACACACACCCTGAGAACGCCGACACGGTAGCATATATAATCCG
CATATTCACATCA------------------CACGCACGCACACGCAAACCAATAATTCTCCTTGCCAAGATGATGATGA
TGATGCACCTTCAAATAGACCACACTGCATCGACGGCCGGCCTGCGTCGACCGATCAGACCCT---TGCTCTGACACCCA
TGGGCGTCTGCTCGATGGCCGCGTTGGCCCCGGCGTGGAGCGACCCGACGCAGAGCAGCTGCGTCCCCGCCAGGATGATC
GTGAACGTCTCCAGCGCGCGCTGCACAC--ACAGATGAGCCGCGTTAGCTAGGTCACACAAGCACAGGAGGGAT--ACGA
CAGATTCTCCATTGATTTACTGGTGCTTAATTACCAGGCTCGGGGGCCTCCAGCCGATGCTGATCTCCTTGCACGCCAGT
CCCATGGCGAGGAGGGTGAGGGTCCAGGAGACGACGGCGGAGGCGGCGGCCGACATCATGCTGGCGGGGTAGCCCTCGGT
GACGTCGCGCAGGCCGGTGAGCGAGGTGGAGATGCCGACTGCGCTGGCCAGGAGCGCGAAGATGATGAAGAACCCCGTCG
CCAGGTTGCCCATCGGGAAGTAGATCGGGAACAGGCGCACCGGCGGCGACGCGC
>chr1A_853
GGCTGC--------------------------------------------------------------------------
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--------------------------------------------------------------------------TGCCGT
TCCAAATGCTCATAGCTACCAACTGTATCTGTGTATTTCTGTGAGGACAGAGGGACATGCG--CTAGCTTTGCATACCGC
ACTCGTGTATATGTGTAGGGGGGCTCAGCTAGTTCCGTGGGTACGAAGAGGGCAAATTATCCATGGCTCTCGCTCTAGCA
GGTCGCCTACTCATGGTGCTGCTCCTCGCGGGCACAGGCGTCGCAGCGCCG---CCGCCGCCGCAGGTCTCGCCTTCGGA
GGCAACGGTTGACAGCATTACGGCCATCTACAACTTCGGGGACTCCATCTCGGACACGGGGAACCTCCTCCGGGAAGGCG
ACACCGGAATGCTGCGTTACACCACGGGCCTTCCCTACGGTGTCACCATCGGCCGCCCCACCGGCCGTTGCTCCGACGGC
TTCCTCATGATCGACTTCCTTGGTACATCCACATGTCCATTTGCCGACTACTAGTACA-ATGCATGCTAGCTCTCTAGCT
CTCTACTGTCTTTAAACGAGCGAGCATCTGTGGTTGT--GCAGCTGAAGATCTCGGCCTCCCGCTGCTCAACCCGTACCT
CGACAGGCGCGCGGATTTCACGCACGGCGTCAACTTCGCCGTCGCCGGAGCCACCACGCTCAGCACGACGGCGCTGGCCA
ACAGGGGGCTCACCGTCTCCCACACCAACAGCTCCCTTGGAGTCCAGCTCAGATGGTTCAAAGAGTTCATGAGCTCCACA
ACTAACTCCCCTCGAGGTC------TACTGCCCTTCACCTTCTCATTAAGCTACTGTAATTAACTTGCCACCAAAGCACA
AATTAAGCTGATGCAAAAA-GTTAACTTTGTATCGCAGAGATAGATAAGAAACTAGCGAGTTCACTGGTGATGCTGGGGG
AGATCGGCGGCAACGACTACAACTACGTCTTCCTACAGCCCCGGCGGACGAACGACAGACACGACCCGATCAGCAATGCT
ACCCGCAGCGCGGAGAGCTTGGCGCACGCCCTCTCACTCGTACCCGAGGTCGTGCAATCCGTAGCAGACGCAGCCAAGGA
GGTGCTGGACATGGGCGCCACGAGGATGGTCATCCCCGGCAACTTCCCCATCGGGTGCATGCCGAGCTACCTGACCGCGG
CCACGGCGTCGAGCCCCGCGTCGCTGCGCGACGGCGACGGCTGCCTCGTCTCCTTCAACGTCCTGGCGCGCGCGCACAAC
GAGCGCCTGCGCCGCGCCGTCGGGGAGCTGCGGCGGTCGTACC-GGACGCGACGGTGGCCTACGCCGACTACTTCGCCGC
CTACCTCGAGATCCTCCGCCACGCGCCGCGGCTCGGCTTCGAGGGCGGCGCGGCCCTGCGTAGGGCGTGCTGCGGCGCGG
GCGGCGGGGAGTATAACTTTGATCACAACAGGCTGTGCGGCGCGCCGGGGACGACGGTGTGCGCGGACCCGAGCAGGCGT
CCTAGCTGGAACGGCATCCACCTCACGCAGCATGGTTACCGCGTCATGACCGAGCTGCTGTATCGCCGAGGGCTCGCGTG
CCCGGCTGCGGTGAAACTCCCGCGCCAGAAGCCTTGCCTGCCCGTGAGTTGATGCGGGTCGTCACGTTTGTTGGCGTTT-
GGGCCCCCGTCTGGTGTAACCACATTTCGTGGATGTCTCAC---------------------------------------
-----AAAAACCAGAACTGCTTGTGTTTCTCCAAAAAAAAACAGAGCTGCTTCCAATTTTGTGAAAGTAATGGAAAGGGG
TAATGCCCGGTTTAAAAATAAATTGTGAAAGCTCTGCTTCATCTGTCTCTATTCAGTGACGCAGCTGCGT---TACCGTT
TAGTCGTTCAATACGCTGTTGTATAAATGGTGCCCGGAAGTAGTAATATTTGCCAGATTTTGCATGAGCAACGTTATATA
TTTGCCAGATTTTGTGCAGAATGCGACAGTCCCACAAATTAGAGAATAAATACTAGTACTCGACATATTATGTGATCGTC
ACGCCCACC-GGCCGGACACAATTTCACCGCAAGCGCACGCACACCCTGAGAACCCCGACACGGTAGCATATATAATCCG
CATATTCACATCA------------------CACGCACGCACACGCAAACCAATAATCCTTGCCAA---------GATGA
TGCTGCACCTTCAAATAGACCACACTCCATCGACGACCGGCCTGCGTCGACCGATCATCAGACCCGTGCTCTGACTCCCA
TGGGCGTCTGCACGATGGCCGCGTTCGCCCCGGCGTGCAGCGACCCGACGCAGAGCAGCTGCGTTCCGGCCAGGATGATC
GTGAACGTCTCCAGCGCGCGCTGCACACACACAGATGAACATCGTTAATTAGGTTCCACAAGGACAAGAGATGGGGTCGA
CAGATTCTCCATTGATTTACTGGTGCTTAATTACCAGGCTGGGGGGCCTCAGGCCGATGCTGATCTCCTTGCACGCGAGT
CCCATGGCGAGGAGGGTGAGGGTCCAGGTGACGAGGGCGGAGGCGGCGGCGGACATCATGCTGGCGGGGTAGCCCTCGGT
GACGTCGCGCAGGCCGGTGAGCGAGGTGGAGATGCCGACCGCGCCGGCCAGGAGCGCGAAGATGACGAAGAACCCCGTCG
CCAGGTTGCCCATCGGGAAGTAGACCGGGAACAGCCGCACCGGCGGCGACGCGC
>SNPs
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----S----------S---SS-------S----------------------S-------S------S-------------
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----------------S-----S-------------S---S--S------------S---------------S-------
-----------------------S------------------S---------SSSSSSSS-----S-S------------
-------------SS-----S---------------S--S----SSS--------S--S----S------SSSS------
-----S-------S--S-SSS-S-------S--------------S---S--S-----------------S-----S---
---S-S---S------S--------SS-----------SS--S-----S----------S----S--S------------
S---------S---S----------------S-------S-S---S------------S-----S------------S-S
-----S-------------S--S------------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S
---S----------S--SS-------------------------------------------------------------
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-------------------------SS--------------------------------S--------------------
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-----------------S--------S---------------------------S-------------------------
------------------------------------S----------------S----S------------S--------
--S------------------------S---------------------------------------------S------
----------------------S---------------------------------------------------------
----------------------------------------------S---------S-------------SSSS------
-------------------------------------SS----------S------------------------------
S--------------------------S--------------S-------------------------------------
--------S----------------------------------S------------------------------------
--------------------------------S-----------------------S------------------S----
--------------------------------SS--------------------S-------------------------
---------------------------------------S---SS-------S--------S------------------
---------------------------------S-S--------------------------------------------
---------------------------------------------------------------------------S----
-------------S---------------------------------------------------------------S--
-------------S---------S--------------------S-----------------------------------
---------------S--------------------------------------------------------------SS
-------S-SS-------------SS--S--------S------------------------------------------
--S-----------------------------------------------------------------------------
----------------------------------------------------S-----------------------S---
---------S--------S-------SSSS-S-S----------------------------------------------
----------------------S-S-S----------------------S------------------------------
-----------------------------------------S--------S------S----------S-----------
--S----------------------------------------------------------------S------------
---------------S----S---------------------------------------------S------S------
--SS------------------S-------------------S-------S---------S-S------S----------
-----SSS--SSSSSSSSSSSSSSSSSSSSS-----------S-------------------------------------
--------------------------------------S---S-------------------------------S-----
-S--------S---------------------------------------------------------------------
-----------------------------------S------------------------S-------------SS----
---------------------S----------------------------------------------------S-----
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---------------S----------------------------------------------------------------
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>forward_3180
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----------------------------------------GGTGTGAGCGACTTATTGCG--------------------
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>reverse_4819
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------------------GCCACATTGTACGTACGAGC------------------------------------------
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