>input_sequence_52309
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-------------------------------ATGGCTTGGGAGCCGGTGATCGGGAAGCTCAGCGTCCGCGTCGTCCGAG
GCCACAACCTCATCGTCGCCGACCCACTCACCCACACCAGCGACCCCTACGTCGTCCTCTACTACGGCTCCCAGGTCAGA
C--GACCCTCATCTCTTCTCTTCTCTTCTTAGTCCTT--GACGTAGGAGCCGT----GTGTTGCCGCCGGCGGCCGGCTG
CTGAGCGCCGCGTGGCCAAGGTCGCAGCCGACGACCGG-------CGCATACATA-------------------------
----------GGTCAGGGAGGGTGCCCATCTGCTCCGAAATCGTTTTGTGCTCACAACATGTTCCATAGATGAACAAAGT
TTCTGACCAGCGATTAACTATTTGCCATC------CTTATATTCTCAGAT-AATTATTGCTCCCGAAAGGTGCGGATTAA
TACATTATGAACAGGTTTCGAAGTGATT-ATATGAATCAGACTGTAGTTGTTCCCAAACTTGGTCATGGGATTTTCTAAA
ATGAACC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------AAT-----------------------------------------------------------
-----------------------------------------------------------TAGTTCTATTTTATCTCATCG
AGGAAGGAACTGTTGCTTGACTTTGATAGT---------GCGCTATAAATTCCGGACGGTGGCATGCATGATGCCAGATT
TTCACTTCACTATTATGCACA---AT--------------------------ATATAATTATACAAACTGTAATTTCTAG
AGTTGGTTT-CAGGTTCTGTATGTGACATGGACAGATGTCCCGCTTCTCACCA--------TTACTGCTAATTTATTTCG
TTATC--TCTGTGTTACTGAAGTTTTATTTCCTCATGGTGTACAAGGTGAAGACTAGCGTCCAGAAGAAAAATGTCAATC
CTCTATGGAATGACGTATTGGTGCTCCCTGTCACAGATCTTACAAAGCCAGTCAAACTTGTAAGTCTCCTGTTTGAGTTT
CTTCGATTCATCAAGTAAACTCTACTAAAACTTTGTCTGTGTATATTATGTGTAACCTGAAGTTGAAAGGAACTTCAATA
TTTGTTACATACAGTAGTAT---------TTTAACAAATTTCTTAAATAAACCCCCAAAATATG-ATCGCACAGAATTTT
CTTCTGCGCTGAAACATG-----AAAAATAGGGG--ACCTTTTACACCATAGGTTCATAGATGGTTGGCGAAGATATTAA
ATGAACGAGGTACTTATATATCCAACTGCCAAAAACATGATGCAGGAGGTTTTTGACGCGGACACATTCACGGCGGATGA
CAGCATGGGAGTGGCCGAGTTCAGCGTAACCGATATCTACGACGCCGCGAAGCTGGATCTAAAGCATGCCTCTGACGGAA
CCAGGATCAAGACGATCTACCCGGTCGGCACAAACTACCTTGGCGGTGAGAGCCACGTGTCGTGGAAGAATGGCAAGGTC
GTCCAGGACCTGATTCTGAAGCTGAAGAATGTCGACAGTGGCTCTGTCGTGCTGCAGCTGGAATGGGTTCACGTCGTCCC
TGGTGTTACGCTTTAA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------
>chr4B_1_TraesCS4B01G380100
CACGCAGAGTGTTCGTCTTCTTACAAGTTGTGGTTGACAACACAAAAATTCATGGGCCATATCCTAAGTCACCACACCGT
CCGAGAGGAAGTTGAACCAAGAGGCAAATTGTTGGGAAGCCGTGGCCGGACACTTATAGTGAGCAGTGTGCCATAAGAAA
GCAAATAAAACATCAAATCAGTAATAGTTACAGAATGCAATTCAAACTCAAGCAAATTCATTTTTTTCATGTACATATAT
TCGACTTCGTGTTATAT---ACTTTGCACCAATTTCCAAATTCAATCCTTCCATGCCA----TTGAATAACAAAAATA--
--GCTCGTCTCTCCCTCCCTCTATCGGTTTGGGGACCAAGTCACCCAACAGTCTTGTCGATGTTAATTTAAAAATTCCTA
TACGCGCAAATTACAATGTAAAGCTAAATTACTCACGCTGATTAATTAGGAGATGCAATTTCAAGCGTTTCCTTATGTAG
AAGAAATTTGCAAGTCTTTGGCACGGCAAAAATAAAAGAGAGAAATTTGCATGCTTTTTTTTTAGCATCAGTACAGACAC
AAGCGCTCATATACACGCGCATACATTCACCCCTATGAACGCGCGCACACACACTCTATCTCTATGAGCACCTCCGATAG
ACTGGGCCGGCATATCATCTTGAGATTTACGAAGCAACCGTAGACGCCTCGTCGTCGATAGGAACGTCTCCTCCCACTGA
AAGCGCATCGCCGGAAATCCTGAAATAAATCCAGGAATTTGCATGCTTTCTGAAACTGAAAAGCCAGCGCCAGCGGGGAT
TTGCAATTTACTCGACACTTAATGAGTA---ACATTAATTCCCATTGCCATACGTACCGTCGTCGCCA-----GCCTGGG
CGGAGG---CGATAAAACCCGGCGCCGGCCGGCCG--------------CATCCATTCCATCCTGCCGCCAGCCCGC---
------------------TCCTCTCCTCGC--------------TCCCATCCAGTGGTTAGAAGCCGAGGATTCGTCCGT
CGAAAAACCTGTGCTGTACCGGCGGTCTGCCATGGCTTGGGAGCCGGTGATCGGGAAGCTCAGCGTCCGCGTCGTCCGAG
GCCACAACCTCATCGTCGCCGACCCACTCACCCACACCAGCGACCCCTACGTCGTCCTCTACTACGGCTCCCAGGTCAGA
C--GACCCTCATCTCTTCTCTTCTCTTCTTAGTCCTT--GACGTAGGAGCCGT----GTGTTGCCGCCGGCGGCCGGCTG
CTGAGCGCCGCGTGGCCAAGGTCGCAGCCGACGACCGG-------CGCATACATA-------------------------
----------GGTCAGGGAGGGTGCCCATCTGCTCCGAAATCGTTTTGTGCTCACAACATGTTCCATAGATGAACAAAGT
TTCTGACCAGCGATTAACTATTTGCCATC------CTTATATTCTCAGAT-AATTATTGCTCCCGAAAGGTGCGGATTAA
TACATTATGAACAGGTTTCGAAGTGATT-ATATGAATCAGACTGTAGTTGTTCCCAAACTTGGTCATGGGATTTTCTAAA
ATGAACC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------AAT-----------------------------------------------------------
-----------------------------------------------------------TAGTTCTATTTTATCTCATCG
AGGAAGGAACTGTTGCTTGACTTTGATAGT---------GCGCTATAAATTCCGGACGGTGGCATGCATGATGCCAGATT
TTCACTTCACTATTATGCACA---AT--------------------------ATATAATTATACAAACTGTAATTTCTAG
AGTTGGTTT-CAGGTTCTGTATGTGACATGGACAGATGTCCCGCTTCTCACCA--------TTACTGCTAATTTATTTCG
TTATC--TCTGTGTTACTGAAGTTTTATTTCCTCATGGTGTACAAGGTGAAGACTAGCGTCCAGAAGAAAAATGTCAATC
CTCTATGGAATGACGTATTGGTGCTCCCTGTCACAGATCTTACAAAGCCAGTCAAACTTGTAAGTCTCCTGTTTGAGTTT
CTTCGATTCATCAAGTAAACTCTACTAAAACTTTGTCTGTGTATATTATGTGTAACCTGAAGTTGAAAGGAACTTCAATA
TTTGTTACATACAGTAGTAT---------TTTAACAAATTTCTTAAATAAACCCCCAAAATATG-ATCGCACAGAATTTT
CTTCTGCGCTGAAACATG-----AAAAATAGGGG--ACCTTTTACACCATAGGTTCATAGATGGTTGGCGAAGATATTAA
ATGAACGAGGTACTTATATATCCAACTGCCAAAAACATGATGCAGGAGGTTTTTGACGCGGACACATTCACGGCGGATGA
CAGCATGGGAGTGGCCGAGTTCAGCGTAACCGATATCTACGACGCCGCGAAGCTGGATCTAAAGCATGCCTCTGACGGAA
CCAGGATCAAGACGATCTACCCGGTCGGCACAAACTACCTTGGCGGTGAGAGCCACGTGTCGTGGAAGAATGGCAAGGTC
GTCCAGGACCTGATTCTGAAGCTGAAGAATGTCGACAGTGGCTCTGTCGTGCTGCAGCTGGAATGGGTTCACGTCGTCCC
TGGTGTTACGCTTTAAGCTGTGCCGGACTGAATGTTATATC---------------------------------------
------------GATGTGTTGGTAATTTGTGGATGTTGTGGTTTG-CAGTGCATGGTGTGTGTACGTGCGTTATTGACTT
CAGCTTGATGTGTGCACTGTATTTGTAGTACTATGGTTGAGGAGTTTGTGCTTGGAGTCGAAGAAATATGAGGGTTGTGC
GTGTTATTGACTTCAGCTTGAAATGAAATTTGCTTCGAACATAGGAGGGTTGAGTTGATCCCTTTTGTGATTTTGCAATT
TGCATAGAGCATGCTCTGCTCCTTAATCGATTATTGGTGGAT--------------------------------------
--------------CTTACAGAAAAACCAAAAGGAGCTGATATATATAGGGAGTAAGGCTGCTCATGCAAGTAACAGGTG
AGATCTTCCATGCAGCTAGAGGTTGGCGCCCCTTTCAGGGATTAAACAGGTGAGATCCATTCTGCTGAAATATGTTAAAG
GTGCTTGTCTTTCAGGGATTAAACATTAGCACGGAGCTCACAATTTTAACTCAGTCTATTATCAATCAGAAAACTATTTC
ATAGATATGTGAAGAAGAAAAATGTAAACGGGGCTGATACTATGTTCTGCGAAGATTGGTGATAGATGATAAACCTCTAA
ATCAATCTTACCCCAGACTTTATGATGTTTGCTTTACTAAAAGCATTGCTGTCTCTGAGGTTTTTGAGAAAGGGTGGGAT
CACTTAACTTCGAAAGAAACTTGTGGGGTGATACGCTACTGCTTGTAAATATCTGAAGTGATTGATGTT-----------
--------------------------------------------------------------------------------
--------------AATCTGTAATTTTTTCTTTTAATGGAAATCAGGGGAACCCCTTTTACTAAAAAGGATGGTGTGGAA
GATTTGGGGCGCTCGGGACGCGCGAGTTTTCCGCCAATAATCAGTAAGTGTTGATGATGTACTCCCTCCGTTCCTAAATG
TAAGTCTTTTTAGAGATTCCAATGAGGGACTACATGCGGAGCAAAATGAGTGAAACTACACTATAAAATATGTCTATATA
CATCCGTATATAGTCCATAGTGGAA
>chrUn_66
-----------------------------------------------------------------AAGTCATCACACGGT
CTGAGAGGAAGTCGAACCTAGAGGCAAGTTGTTGGGAAGCCGTGGACCCACACTTATAGTGAGCAAAAAATGTTTTGACT
CCTAATAAAACATCAAATCAATAGTTACATG---ATGCAATTCGAACTCAAGCAAATTCATTTTTTTCATGTA----TAT
TCGACTTTGCGTTGTACTCCACTTTGCACCAATTTTCAAATTTGATCCTTCCATGCCGTGTTTTGAATAACAAAAATATA
TAGCTCGTCTTTCCCTCCCTCTATCGGTTTGGGGACCAAGCCACC---CAGCCTCGTCGATGTTGATTTAAAAATTCTTA
TA--CGCAAATTACAGTGTAAAGCTAAATTACTCACGCTGGTTAC----GAGATGCAATTTCAAACGTTTCCTTTTGTAG
AAGAAATTTGCAAG-CTTCGCCACGGCAAAAAAAGAAGAGAAATTTGCTATCA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------ATTCTTTCTGAAACGGAAAAGGCAGC-------GGGAT
TTGGAATTTACTCGACACTTAATGAGTAGTAACATTAATTCCCATTGCCATACGTACCGTCGCCGCCT-----GCCTCGG
CGGAGTCGCCGATAAAACCCGGCGCCGGCCGGCCGGCAGCTGTTGGCCGCATCCATGCCACCCTGCCGCCAGCCCGC---
------------------TCCTCTCCTCGCCCAGCCTGCTCCGCTCCCATCCAGTGCCTAGAAGCCGGGGATTCGTCCGT
CGATAAACCTGTACTGTACCGGCCGTCTGCCATGGCTTCGGAGCCGGTGCTCGGGAAGCTCAGCGTCCGCGTCGTCCGAG
GCCACAACCTCGTCGTCGCAGACCCACTCACCCACACCAGCGACCCCTACGTCGTCCTCTACTACGGCTCCCAGGTCAGA
-----CCATCATCTCTTATCTTCTTCCC--AGTCCTT--GACGTAGGAGCCGTACGTGTGTCGCCGCCGGCGGCCGGCTG
CTGAGCGCCCCGTGGCCAAGGTCGCAGC-AACGACCCAGGG----------CATAAGTTATGGCCG-------------C
GTGGGATCGGGTTCAGGGCGGGTGTCTATCTTCTCCAAAATCGATTTGTGCTCGCAAGATGTTCGATAGATGAACAAGTT
TCTGA--CAGCTATTAATTCTTTGAATTTAAGCTAATAAATGTAAGCATGTTTGGCATG---------------------
----------------------ATGATTGATATGAATCAGACTGTAGTTCGTCCCA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GCTTTTTTTTAG
ATAAGAGGCATATTGCCCGGCTGTAGCGATCTGAAGCCCTTACAGAGTGCACACTTAAGGTTCGCGAGAAACGGAAGTAC
GAAAGAATTAGTTGAGTGAAT-----------------------------------------------------------
-----------------------------------------------------------TAGTTCTTGTTTATCTCCTCG
TGGAAT----TGTTGTTTGCCTTTGATAGAATTAGTTGAGTGCTATATATTAATTTCGGACAGTGGAGTAG---------
---------------------------------------------------------------TAAACTGTAATTTCTGC
AGTTAACTTACAGTTTC----TGTAACATGGACAGATATCCTGTTTCTCACCA--------TTACTGCTAATTTCA----
TTATC--TCTGCGTTACTGAAATTTTATTTCCTCATGGTGTAGAAGGTGAAGACTAGCGTTCAGAAGAAAAATGTCAATC
CTTTATGGAATGACGTACTGGTGCTCCCTGTCACAAATCTTACAAAGCCGGTGAAACTTGTAAGTCTCCTGTTTGAGTTT
CTT-----CATCAAGTAAACTCTACTAGAACTTTGCGTGTC-------TGTGTAACCCGAAGTTGAAAGAAACTTCAATA
TTTGTTACATACAGTAGTAT---------TTTCACAAATTTCTTAAATAAGCCCCCAAAAAACG-ATCGCATAGAATTTT
CTTCTGAGCTGAAACATG-----AAAGATAGGGGTT-CCTTTTACACCATAGGTCCACAGATGGTTCGCAAAGTTATTAA
ATGAACGAGCTACTTACATATCCAACTGGCAAAAACATTATGCAGGAGGTTTTTGATGCGGACACATTCACCGCGGATGA
CAGCATGGGAGTGGCTGAGTTCAGCGTAACTGACATCTACGACGCCGCGAAGCTGGATCTAAAGCATGCCTCTGACGGAA
CCAGGATCAAGACCATCTACCCGGTTGGCGCAAACTACCTTGGCGGCGAGAGCCACGTGTCGTGGAAGAATGGCAAGGTC
GTCCAGGACTTGATTCTGAAGCTGAAGAACGTCGACAGTGGCTCCGTCGTGCTGCAGCTGGAATGGGTTCACGTCGTCCC
TGGTGTTACGCTTTAAGCTGAGCCCGGCCGAATGTTATCGCAACCTTGTTTGATGAAGCTGCAGCTATGGTTGGTTCCTG
TTCCTTGTGTCAGATGTGGTAGCAATTTGTGGATGTTGTGGTTTGACAGTGCATGTGGTGTGTGTGCGCGTTATTGACTT
CAGCTTGATGTGTGCACTGTATTTCTAGTTGTAACCTTCAAAAGAAACACAGTAAGTTGTAACCTTCAAAAGAAACACAG
TAAGTTTTTTTTTTCAAATCGGGCTACTGCCCTTTCCATTACTTTCATAACGTAAATTGTTGGAAATGTGTCTTAGGGTC
AATAATTATTATTTAATTATTTCTAAGTTTATGATTAATATTTATGTTCTATGTTATAACTGATATGGCTATCGAGTCTA
CGATAACCAAGAGGCTCACAGAAAAACTCATATGATTAATCTTTTGGTATGTATCGTGTTTCTCCCTTTGTTGCATGGTT
TTCCTTGGGGTTTTCCCCTTTTAGATTTGTAGGTTCTGTAATCTGGAGTCAGTTTAAAAACTGTTGCCCTGATTA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TTGTAAATATCTGAAGTGATTGATGTTGCTAGTGGTGG
TCGAGAGCTGGGCCGCACCCCGGTTGCTCACCATTGGTTTGAATTTGCAGTATGCTGCAGCAGTTTGGTTATTTTGGTTC
TGGTTTGTAAACTGAATTTGTAATGGTATCTTTTAATGGAAATCAGGAGCAACCCCTTTTACAAAAAAAATGATGTGGAG
GATTTGGGTCGGTCGGGACGCGCGAGTTTTCCGCCAATAATCA-------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr5A_745
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AATTTGCAAGCTTTCTAAAACGGAAAAGGCAGC-------GGGAT
TTGCAATTTACTCGACACTTAATG---AGTAACATTAATTCCCATTGCCATACGTATCGTCGTCGCCCGCCCCGCCTCGG
CGGAGTCGCCGATAAAACCCGGCGCCGGCCGGCCGCCAGCTGTTGGTCGCATCCATTCCACCCTGCCGCCAGCCACAGAT
GAGTACTGCTCCTTGATTTCCTCTCCTCGCCCTGCTCGCACCCAGT--------TGGCTAGAAGCCGAGGATTCGTCCGT
CGATAAACCTGTACCG-ACCGGCCGTCTGCCATGGCTTCGGAGCCGGTGATCGGGAAGCTCAGCGTCCGCGTTGTCCGAG
GCCACAACCTCATCGTTGCCGACCCACTCACGCACACTAGCGACCCCTACGTCGTCCTCTGCTACGGCTCCCAGGTCAGA
GTAGACCCTCATCTCTTCTCTTCTTCCC--AGTCCTT--GACGCAGGAGCCGT----GTGTTGCCACCGGCGGCCGGCTG
CAGAGCGCCGCGTGGCAAAGGTCGCAGCCGACGAGCGG-------CGCATACATAGGTTATGGCCGGCCGCACGGCCTTC
GGGGGATCAGGGTCAGGGAGGGCGACCATCTTCTCCGAAATCGTTTTGTGCTCACAAGATGTTCGATAGATGAACAAAGT
TTCTGACCAGCGATTAATTAGTTGCCGCC------CTTATATTTTCAGAT-AATTATTACTCCCGAAAGGTGCGGATTAA
TACCTGATAAACAGGTTTTGAAGTGATTGATATGAATCAGACTGTAGTTC----CCAACTTGGTTTCGGGATTTCAAAAA
TGAACCAA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GAAT-----------------------------------------------------------
-----------------------------------------------------------TAGTTCTATTTTATCTCCTCG
TGGAAT----TGCTGCTTGCCCTCGATAGAATTAGTTGAGTGCTAAAAATTTCCGACAG--------------------T
TTTACTTCACTACTATGCATTATGAT--------------------------CTATGAATATATAAACTGTAATTTCTAG
AGTTGATTT-CAGGTTATGTATGTCACATGGACAGATATCCCGCTTCTCACCAATTCACCATTACTGCTAATTTCA----
TTATC--TCCGTGTTACTGAAGTTTTATTTCCTCATGGTGTAGAAGGTGAAGACTAGCGTTCAGAAGAAAAATGTCAATC
CTCTATGGAATGACGTATTGGTGCTCCCTGTCACAGATCTTACAAAGCCAGTCAAACTTGTAAGCCTTCTGTTTGAGTTT
CTT-----CATCAAGTAAAGTCTACCAAAACTTTGTGTGTGTATATTATGTGTAACCTGAAGTTGAAAGGAACTTCAGTA
TTTGTACTATACAGTGCAGTGGGTATCCCTTTAACAAATTTCTTAAATAAGCCCCCAAAAAAGTTATCGCATAGAATTTA
TTTCTGCGTTGAAACATG-----AAAGATAGGGG--ACTTTTTACACCATAGGTTCATAGATGGTTGGTGAAGATATTAA
ATGAAC-----ACTTATATATCCAACTGGCAAAAACATTATGCAGGAGGTTTTTGATGCGGACACATTCACAGCGGATGA
CAGCATGGGAGTGGCAGAGTTCACCGTAACTGATATCTATGACGCCGCGAAGCTGGATCTAAAGCATGCCTCTGATGGAA
CCAGGATCAAGACGATCTACCCGGTTGGCACAAACTACCTTGGCGGCGAGAGCCACGTGTCGTGGAAGAATGGCAAGGTC
GTCCAAGACTTGATTCTGAAGCTGAAGAACGTCGGCAGTGGCTCTGTCGTGCTGCAGCTGGAATGGGTCCATGTC---CC
TGGTGTTGCGCTTTAAGCTGAGCCCGACTGAGTGTTATTGCAACCTTGTTTGACGAAGCTGCAGCTATGGTTGGTTCATG
TTCCTTGTGTCAGATTTGGTAGCAATTTGTGGATGTTGTGGTTTG-CAGTGCATGTGGTGTGTGTGCGCATTATTGACTT
CAGCT------GTGCACTGTATTTGTAGTACTGTGGTTGTGATGCTTGTGCTTGAAGTCGAACAAATAAGAG--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr2D_994
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------GTCTGCCATGGCGTCGGAGCCGGTGATCGGGAAGCTCAGCGTCCGCGTTGTCCGAG
GCCACAACCTCGTCATCGCCGACCCGCTCACCCACACCAGCGACCCCTATGTCGTCCTCTGCTACGGCTCCCAGGTCGG-
-----CCCTCATCCC----CTTCTCCCC--AGTCCTT--GACGTAGGAGCCGT----GTGTTGCCGCCGGC-------AG
CTGAGAGCGGCGTGGCAAAGGTCGCAGCCAACGACTCAC-------GCATACGTAGGTTGTGGCGG----CACGGCATCC
GGGGGAT-CGGGTCAGGGAGGGTGCCGATCTTCTCCGAATTCGTTTTGTGCTCACGAGATGTTTGATAGATCAATAAGTA
CG--GACCAGCTATTTCTTGCTGTTAAGCTAGGTTCTTATATTCTCATATTAGTTACA---CCGGAGAGGCACCGATTAA
TACCTTATGAACAGGTTTTGAAATGATTGGTTCGAATCGGACTAG---TT----CCCACTTGGTCATGGAATTTCAAGAC
CGACGCATT---CCTGGCGTGCAAACAGGACATGTTATGTTTTGCAGCATGTTGAACTGAACTACTGAACAGCAGTATAT
CAAATCATGAAATAAGTCAAGCTCAAAACAAGAAAATCGTGATGGAAATGTGAATGCCCAGTTGTTTAACTGCATAGCAG
AGTA-CAAAACCTAAAAGTTCACCTAAAATCGAAAAATCATGATGTTATGTCCATTTAGTTGATGATGAATTAGTACAGT
AAGCGGCCTTTGGATGATTCCCACACTGATAGGCTAATCAAAATGGTATATCATCGGTTAAATGGTCAGCTTTTTTTTAG
ATTGGTCAGCTAACATGTTCTAGATTGCTATTTTGTTATTCATAGCTGTCAATTTCTAAGATAAATCACTGAGTATCTTA
CTTTTTTGTTTATTTAAGATTATCTTGTGTGTTAACAAGGGCTTGGCTCTTCTCAAATAGAAAAAAGGGCTTGCTGTGCT
GCATGATTACCTACCCAATGGTTTATATAATACACTCAATAGTTCTGTACGAACAGGTCTAGTTCTATTTTATCTCCTCG
TGGAAT----TGTTGCTAGCCTTTGATAGAGTTGGTTGAATGCTATAAATTTTGCACAGTG----GCATGATGTCAGATT
TTCAGTTCACT---------------------------------ATTATGCACTATGATTATATAAACTGTAATTTCTAC
AGTTGACTT-CAGGTCC----AGTGACATGGACAGCTATCGTGTTTCTCAGCA--------TTACTGCTAATTTCA----
CTATCTATCTGTGTTACTGAAGTTTTATTTCCTCATGGTGTAGAAGGTGAAGACTAGCGTTCAGAAGAAAAATGCCAATC
CCTTATGGAATGACGTACTGGTGCTCCCTGTCACAAATCCTACAAAGCCAGTGAAACTTGTAAGTTTGCTGTTTGAGTTT
CTT-----CATCAAGTAAACTCTACTGAAATTTTGTGTGTACATATTTTGTGTAACCTGAAGTTGAAAGGAACTTCAGTA
TTTGTTATATACAGTAGTAT---------TTTAACCAATTTCTGAAAGAAGCCTCC-AAAAATG-ATTGCATAGAATTTT
CTTCTGTGCTGAAACATACAGTAAAAGATAGGGG--GCCTTTTACACCATAGATCCACAGATGGTTGGTGAAGATATTAA
ATGAAC-----ACTTATATATCCACCTGGCAAAAACATCATGCAGGAGGTTTTTGATGAGGACAAATTCACAGCGGATGA
CAGCATGGGAGTGGCTGAGTTCAACGTAACTGATACCTATGACGCTGCAAAGCTGGATCTAAAGCATGCCTCTGATGGAA
CCAGGATCAAGACGATCTACCCGGTTGGCACAAACTACCTTGGCGGTGAGAGCCACGTATCGTGGAAGAATGGCAAGGTC
GTCCAAGACTTGATTCTGAAGCTGAAGAATGTTGACAGTGGCTCTGTCGTGCTACAGCTGGAATGGGTTCACGTC---CC
TGGTGTTACCCTGTAAGTTGCGCCCGACTGAATGTTAT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr2B_994
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------GTCTGCCATGGCGTCGGAGCCGGTGATCGGGAAGCTCAGCGTCCGCGTTGTCCGAG
GCCACAACCTCGTCATCGCCGACTCGCTCACCCACACCAGCGACCCCTACGTCGTCCTCTGCTACGGCTCCCAGGTCAGA
-----TCCTCATCCC----CCT-TTTCC--CGTCCTT--GACGTAGGAGCCGT----GTGTTGCTGCCGGCC-------G
CTGAGCGCGGCGTGGCAAAGGTCGCGGCCAACGACCCACGCTCTCCGCATACATAGGTTATGGCCG----CGTGGCATTC
AGGGGATCCGGGTCACGGAGGGTGACGATCTTCTCCGAACTCGTTTTGTGCTCACAAGATGTTCGATAGATCAATAAGCA
CG--GACCAGCTATTTCTTGCTGTTATGCTAGGTTCTTATATTCTCATAT-AGTTACA---CGTCCACCGGAGAG-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CT---------------------------------ATTATGCACTATGATTATATAAACTGTAATTTCTAC
AGTTGACTT-CAGGTTC----GGTGACATGGACAGCTATCGTGTTTCTCAGCA--------TTACTGCTAATTTCA----
TTATCTATCTGTGTTACTGAAGTTTTATTTCCTCATGGTGTAGAAGGTGAAGACTAGCATTCAGAAGAAAAATGCCAATC
CCTTATGGAATGATGTATTGGTGCTCCCTGTCACAAATCCTACAAAGCCAGTGAAACTTGTAAGTTTGCTGTTTGAGTTT
CTT-----CATCAAGTAAACTCTACTAAAATTGTGTGTGTACATATT-TGTGTAACCTGAAGTTG---GGAACTTCAGTA
TTTGTTATGTACAGTAGTAT---------TTTAACCAATTTCTGAAAGAAGCCTCC-AAAAATG-ATTGCATAGAATTTT
CTTCTGCGCTGAAACATA-----AAAGATAGGGG--GCCTTTTACACCATAGATCAACAGGTGGTTGGTGAAGATATTAA
ATGAAC-----ACTTATATATCCACCTGGCAAAAACATCATGCAGGAGGTTTTTGATGAGGATAAATTCACAGCGGATGA
CAGCATGGGAGTGGCTGAGTTCAACGTAACTGATATCTATGACGGTGCAAAGCTGGATCTAAAGCATGCCTCTGACGGAA
CCAGGATCAAGACGATCTACCCAGTTGGCACAAACTACCTTGGCGGTGAGAGCCAGGTGTCGTGGAAGAATGGCAAGGTC
GTCCAAGACTTGATTCTGAAGCTGAAGAACGTTGACAGTGGCTCTGTCGTGCTACAGCTGGAATGGGTTCACGTC---CC
TGGTGTTACCCTGTAAATTGCGCCCGATTGAATGTTAT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr2A_994
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------GTCTGCCATGGCGTCGGAGCCGGTGATCGGGAAGCTCAGCGTCCGCATTGTCCGAG
GCCACAACCTCGTCATCGCCGACTCGCTCACCCACACCAGCGACCCCTACGTCGTCCTCTGCTACGGCTCCCAGGTCAGA
-----TCCTCATCCC----CTT-CTTCC--CAGTCCTTGGACGTAGGAGCCAT----GTGTTGCTGCCGGC-------TG
CTGAGCGCGGCGTGGCAAAGGTCGCGGCCAACGACCCAC-------GCATACATAGTTTACGGCCG----CATGGCACTC
AGGGGATCGGGGTCAGGGAGGGTGACGATCTTCTCCGAACTCGTTTTGTGCTCACAAGATGTTCGATAGATCAATAAGTA
CG--GACCAGCTATTTCTTGCTGTTAAGCT-GGTTCTTATATTCTCATAT-AGTTACA---CCAGAGAGGCACCGATTAA
TACCTTATAAACAGGTTTTGAAATGGTTGATTTGAATCAGACTAG---TT----CCCACTTGGTCATGGAATTTCAAGAC
CGACGCATTTGGCCTGGCGTGCAAACAGGACATGTTATGTTTTGCAGCATGTTGAACTGAACTACTGAAGAGCAGTATAT
CAAATCATGAAATAAGTCAAGCTCAAAACAAGAAAATCGTGATGGAAATGTGAATGTCCAGTTGTTTAACTGAAGAGCAG
AGTACCAAAACCTAAAAGTTCACCTTCAATCGAAAAATCATGATGTTATGTCCATTTAGTTGAT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TACCTACCCAATGGTTTATATAGTACAATCAATAGTTCTGTACGAACAGGTCTGGTTCTATTTTATCTCCTCG
TGGAAT----TGTTGCTAGCCTTTGATAGAGTTGGTTGAATGCTATAAATTTTGGACAGTA----GCATGATGTCAGATT
TTCAGTTCACAATTATGCACT---ATTTTTTTTTGAAAAAGACAATTATGCACTATGATTATATAAACTGTAATTTCTAC
AGTTGACTT-CAGGTTC----AGTGACATGGACAGCTATCGTGTCTCTCAGCA--------TTACTGCTAATTTCA----
TTATCTATCTGTGTTACTGAAGTTTTATTTCCTCATGGTGTAGAAGGTGAAGACTAGCGTTCAGAAGAAAAATGCCAATC
CCTTATGGAATGATGTACTGGTGCTCCCTGTCACAAATCCTACAAAGCCAGTGAAACTTGTAAGTTTGCTGTTTGAGTTT
CTT-----CATCAAGTAAACTCTGCTAAAATTTTGTGTGTACATATTTTGTTTAACCTGAAGTTGAAAGGAACTTCAGTT
---------------------------------------------------------AACAATG-ATTGCATGGAATTTT
CTTTTGTGCTGAAACATG-----AAAAATAGGGGGGGCCCTTTACACCATAGATCCATAGATGGTTGGTGAAGATATGAA
ATGAAC-----ACTTATATATCCACCTGGCAAAAACATCATGCAGGAGGTTTTTGATGAAGACAAATTCACAGCGGATGA
CAGCATGGGAGTGGCTGAGTTCAATGTAACTGATATCTATGACGCTGCAAGGCTGGATCTAAAGCATGCCTCTGATGGAA
CCAGGATCAAGACGATCTACCCGGTTGGCACAAACTACCTTGGCAGTGAGAGCCACGTATCGTGGAAGAATGGCAAGGTC
GTCCAAGACTTGATTCTGAAGCTGAAGAACGTTGACAGTGGCTCTGTCGTGCTACAGCTGGAATGGGTTCACGTC---CC
TGGTGTTACCCTGTAAGGTACGCCCAACTGAATGTTAT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-----S--
-S----------S-----S--------S-----------------S-SS----------------SSSSSSSS-SS--SS
S-S-----------------S--S-SSSSSSSSS---------S-----------------------------SSSS---
-------S-S---S--S------------------S------SS-------------S----------------------
----------S-----------------------------S----SSS---S--S---------S------------S--
--SS-----------S------------------------S---SSSSS---------------S---------S-----
--------------S---S-S-----------S-S------S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S------S----SSSSSSS-----
-------------------------------------------------------------------S---------S--
-----S------------------------------------------------------S-------------------
---------------------------------------------------------S----------------------
---S--------S----------S--------------S-----------------------------------------
--------------------------------------------------------------------------------
S-------------------------S-SS--------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S-------------------------S------S---------------
-----------------S--------------------------------------------------------------
---S--------------S------------------------------SS-----------------------SSS---
SSS-S-S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
S----SSSSS---------S---------S----------S----------S---------SSSS--------S------
--------------------S-------------------------------S---S------S----------------
-----S-------------------------------S------------------------------------SSSSSS
------------------------------------------S-----------------S-------------------
--------------------------------------------------------------------------------
---SSSSS----------------------------S-------------------------------------------
--------------------------------------------------S---------S----------S--------
--------------------------------------------------------------------------------
---------S------------------S---------S-----------------S--------------S--------
---------------S--------------S-------------------------------------------------
-------------------------S------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------S---S-------------SS----------------------------------------
------------------S-S-S--------------------------------SS------SS-S-------------
-----------------------------------------S--S---------S-------S-----S---SSSSSSSS
SSSS-S--SSS--SSSSS-SSSSSS-SSSSSSS---S-SS-SSSSSSSSSS-SSSSSSSSSSSSSSSSSS-S--SSSS-S
SSS-SSS-SS--SSSS-SS-SSS---SSSSS-SS-SSSSSS---------------------------------------
----------------S----------SS-S-S--SSSSSSS-S-SSSSS-SS-SSS-S-S---SSSSSSS-SSSS---S
SSSSS-SSSS-SSSS-SSSSSSSSSSSSSSSSS---S-SS--SSSSSSSSS-SSSSSS-SSSSSSSSSSSS--SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------
--------------------------------------------------------------------------------
-----------------S------SS-S-------------------S-S-S---S---SSS-----SS---S------S
--------S--S-------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS
>forward_790
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TGAAACTGAAAAGCCAGCGC----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_3569
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GGGAGTAAGGCTGCTCATGC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
