>input_sequence_52305
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-----ATGACGAGCGTATGGAAGACCAAGGTTCTTCCCGGGCTCAACAAGATCTTCGACAAGGATGGCAAGAAGGCCGCC
GCCGCCGAGTTCTTGAAATCCTTCAACAAGGTACGTCGAGTTCCGGCTTCTTGCTAATTTCTTGTGAAATTTGTGCGTTC
TGAAATTTTGAAATGGTAGATGA----TGTATATATGTGTTTTGTTTGTTTCTTGATTGTGTGGGCGTGCTCTATGTGTG
TAGGAGGAGATTGACAAGGAGATTGGGGACAAGAAGACAGAACTAGAGCCCAAGCTTGTAGAGACTATTGAAGCATCTCC
TCCAGAAATTAAGGTGAAAAGATTTTTGTTTC--GGTACCTAATTAGTATTGGTTTTGTGTGGTTGCTTAGCACATAATT
GTAGGAAGTAGCCACCTT--------AATTAGTACTAATCATACTGTTATCTTGTTGTAGGGATTGATAAAGGATAAGAA
AACATCCAAGATCAAGAAGAACTCGGTTGCCGTCACCAAGTTCCTTGACGATTTGGCCAAGATTGGTAATG-TTTTTTGT
TGCTTAAATTTTGCAAAATAAAATATTGTGAA-AAAA-----AGATTAAATACATAAATGGAATTACTTTTAGCAATCTT
ATCAGGTAATTTCTTAGGGTCCGTATCTTAAATAACCTTTATTCCTTGCCTTTTGAACAAAATAACC-TTCATTATCCTG
CTTTCACATAATTAAACTTTA-----GAGGTATCTTGTTAGAACAAAAAGAAGACAAACAAAGTAATGGAATCTTCTCAC
ATATGTTTCTTGCAACAGAAGTTCCCATGCAAACAGTACCGTTGCTTTTAGGCGATGCAGACAAAACCATAACATGTGCA
GTTAACAAAAGATGAACAAATTAACAGTAATTAATTAAGCAGCACAATCTTTCATTGTTGCCACAGCCCACAGGTAGACT
CGGCTCTCGGGCATACTGCTGAGAGCTTTGTGCGTTCTAGAATAAAGAACACTCTTAATCACTAGTTAATGAAATTAAT-
-TATATCTAACTGACATATGCTAATCAAACTATCGAGCTAATCAGCGTTGGTTAATATGCAGATTTCCCCGGTGCCAAGC
TGGTGAGCGACGCGGTGGCCAAGTCCGGCACCACGCCCCTCTCCCCGGCCATCGTCTTCATCTTGGACAAGGTTGCGCCT
TTCGTCCCCGCGCCCAAGGAGGAGCCCAAGGCCGAGCCCGAG------GCCGCCGCCCCGGCAGAGGAGACCACCACCCG
CGAGGTCGCCGT---GGAGGAGAAGGAGGAGGAGGCCGAGCCCTCCGCCGCACCGGCAGAAGC---CGCGCCGGTGGAGG
CAGCCGCGCCTGCTGCTGAGGTAGTGGAGGAGAAGAAAGAGGAGGAGAAACCCGCCGAAGCCGCCGCACCTGCCGCCGAG
GAGCCAGAGAAGAAGTGA--------------------------------------------------------------
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-------------------------------
>chr3D_1_TraesCS3D01G164500
TCTTTATGAATAAAATTTATTTGAGCATGGTTTGTTATGTGTATCCGTATCATCAAATGATCGGCGTGTATGCGGTTGCA
TGTATTTGAGATTTCGAA--------ATGTGATTGCACGGGCAAACATTTGAGGGGAGCTATCTGTGATGCATCCGCGAA
CATATAGTGGGTCAAATTTATACATTGTTGTAGATG--------GTCTAACATGTTGGAAGAGAACAAGTATATATTTGC
ACTCCAACATGCATAGGTAAATTC---CATTTTGAGAATATTTTTGAGGTGAAAATATAAGATAAATATTTAATATTCCA
TTTCACAACTTTTTTTGCGAGGATCCATTTCACAACATAAATTAAAATGAGGTATATATTTCTCCAAGTACAACAAATTT
TTGCCAGGAGGATTTTTTAATTCTTGACAGCTCTCCCATCCAATTATA--AAACAAATTAAATCATTAACCGTCTCAAAT
CATTTGTGCAACTTGCAGGACACTTAACC-GATTACCAAAGTCATAGCACAGAGGATCCCAACAACATGTCCTACACTCG
CTGTAGCCTGCAGCCTGTACCCCTCCAGCGCAGCTTGCAAGCCTCCACGACCCATTCATCATTTTCTGGCTGCTCTGGCT
TAATGACACCCCTTCCATAACCTTCTCCTCATTTGACGTTCATGCCCCTGCCCCCCTCCAGCAACCCGCGCCACCTCACG
CGGGGGCACCCACGTAATTTCCCCCAG----------GGCCAGGGCGGCCTATCTGGCCAGCCCATTATATATCGCTCTC
ATGGCACCGTGGCTCATGTACTGCTGCCCATTGATAGGCTGGTGATCACTGCTGTCGAGAGGAA----CTACGCATCCAT
CCCTTCCGCCCCCAGCTACCTCGCTTGCTCCACGTAAGTTTCCGCTCCTTCTAGCTTCCCTTGCTGTCTCCTTGGCTTCT
CCTTCCGATGAGAAAACATCTCATGGAGTTTTGTACT---TTTGTTCTTCT------GTAGGCGTCGTCTTTGAAGGAGA
GGAAGATGACGAGCGTATGGAAGACCAAGGTTCTTCCCGGGCTCAACAAGATCTTCGACAAGGATGGCAAGAAGGCCGCC
GCCGCCGAGTTCTTGAAATCCTTCAACAAGGTACGTCGAGTTCCGGCTTCTTGCTAATTTCTTGTGAAATTTGTGCGTTC
TGAAATTTTGAAATGGTAGATGA----TGTATATATGTGTTTTGTTTGTTTCTTGATTGTGTGGGCGTGCTCTATGTGTG
TAGGAGGAGATTGACAAGGAGATTGGGGACAAGAAGACAGAACTAGAGCCCAAGCTTGTAGAGACTATTGAAGCATCTCC
TCCAGAAATTAAGGTGAAAAGATTTTTGTTTC--GGTACCTAATTAGTATTGGTTTTGTGTGGTTGCTTAGCACATAATT
GTAGGAAGTAGCCACCTT--------AATTAGTACTAATCATACTGTTATCTTGTTGTAGGGATTGATAAAGGATAAGAA
AACATCCAAGATCAAGAAGAACTCGGTTGCCGTCACCAAGTTCCTTGACGATTTGGCCAAGATTGGTAATG-TTTTTTGT
TGCTTAAATTTTGCAAAATAAAATATTGTGAA-AAAA-----AGATTAAATACATAAATGGAATTACTTTTAGCAATCTT
ATCAGGTAATTTCTTAGGGTCCGTATCTTAAATAACCTTTATTCCTTGCCTTTTGAACAAAATAACC-TTCATTATCCTG
CTTTCACATAATTAAACTTTA-----GAGGTATCTTGTTAGAACAAAAAGAAGACAAACAAAGTAATGGAATCTTCTCAC
ATATGTTTCTTGCAACAGAAGTTCCCATGCAAACAGTACCGTTGCTTTTAGGCGATGCAGACAAAACCATAACATGTGCA
GTTAACAAAAGATGAACAAATTAACAGTAATTAATTAAGCAGCACAATCTTTCATTGTTGCCACAGCCCACAGGTAGACT
CGGCTCTCGGGCATACTGCTGAGAGCTTTGTGCGTTCTAGAATAAAGAACACTCTTAATCACTAGTTAATGAAATTAAT-
-TATATCTAACTGACATATGCTAATCAAACTATCGAGCTAATCAGCGTTGGTTAATATGCAGATTTCCCCGGTGCCAAGC
TGGTGAGCGACGCGGTGGCCAAGTCCGGCACCACGCCCCTCTCCCCGGCCATCGTCTTCATCTTGGACAAGGTTGCGCCT
TTCGTCCCCGCGCCCAAGGAGGAGCCCAAGGCCGAGCCCGAG------GCCGCCGCCCCGGCAGAGGAGACCACCACCCG
CGAGGTCGCCGT---GGAGGAGAAGGAGGAGGAGGCCGAGCCCTCCGCCGCACCGGCAGAAGC---CGCGCCGGTGGAGG
CAGCCGCGCCTGCTGCTGAGGTAGTGGAGGAGAAGAAAGAGGAGGAGAAACCCGCCGAAGCCGCCGCACCTGCCGCCGAG
GAGCCAGAGAAGAAGTGATCGGTCGCCGCCGGCCGGAGTCCAAGAGCAACCCAAACCACCACCTGGCTTGCTAGCTGCTG
GTAATGGAAGAAATCATTTTAAGTTATTGTGAATTTGTAGTCGCTCTCCGTGTCAAGGTAGCTGCACAAAAGTAAGCACG
TACGTACGACACACTGCACTTGCCATGCATACCACGCATGCAAACGTACACGCATGGAACATTTGTTATTCTTTCGATGG
ACCGGTCTCCTCACCGTATGTGTACATTTTACGTGGGGCTTTCTTGCTTTTTTGTGGTGATTAAAACCTGTGTAATTATG
ATTATGTTGGTGTGTTAATTTGTTGGTCATGGTATAAGCAGGAACTTGTGCATTCTTCCTCTTCTTGAACTTGTGCAAAC
CCTGGATGAATCATATAGAGCCCGGCTGTTGATATGGTTGATTTTACCGTCATTCACATCAGAGTGGATTAACAACAATG
GCTTTGCATGCATACGCCTCC--------------------------------------GGTCAGGTTTCACAAGATGT-
-ACATAAGCACGAGGGAAGTCGGTAGGAAACTGATGGCGGTGGCGTACCAAATCGTGGCACGAAACCTAGAAACCGATCG
ATGGAGATAGATAGCTTTGGGATATATATATACTGACATTGCACATACTTATCTCGTTTGCTTAGCCAGATCAGTGAAAA
A-AATCAATCAGTGCCGGAAGGAAAGGGACGTGAGCTCAATCCTATCGCCCGGCCGCACGACACGCCTCTCGCCCAGCAG
CCT-----GAGATCTCGATCTCTCATCGGCCCCGCACGGCCGGGCCTGCGTGACGTACGTGCCTGCGTGCACCCAAATTA
-------TTACTAGTAATTAACAAGGCTCGCTCACCATTGATCCCTCCACTGATGGGTACACGCAGGAGGATAAAGGAGA
CGTTTCAGTCGAAAAAAAAGGGGTTGATCGTGATCTTTTCTGGGTTAGTGTTCCGTTCTGTCCGTCCGGGCAAAGCAGTG
AACCACGCACGGTGCCTTCTGCTTTTGTCAG
>chr3B_1
TCTTTACGAATAAAAATTATTTGAGCGTAGTTTGTTACGTGTATTCGTATCATCAAATGATCGATGTGTATGTGGTTACA
TGTATTTGAGATTTCGAAAGTGAGGGATGTGATTGCACGGGCAAACATCTGAGGGGAGCCATCTGGGATGCATCCGCGAA
CATGTAGTGGGTCAAATTTATACATTGTTGTAGATG--------GTCTAACGTGTTGGAAGAGAACAAGTATATAATTGT
ACTCCAACATGCATAGGTAAATTATTACATTTTGAGAAAAAAATT---GTGAAAATAGAAGCTAAATATTTAAGATTCTA
TTTCACATCTTTTTTTGCGGGTATCCATTTCACAATAAAAATTAAAATGAGGTATATAATTCTCAAAATACAGCAAGTAT
TTGCCGGGAGGAATTTTTTATTTTTGACAGATCTCCCATCCATTTATATAAAAAAAATCAAACTATTAATCGTGTCAAAT
CATTTGTGCAACTTGCAGGACAATTAACCACATGACCAAAGTCATAGCACAGAGGATCCCAACAACATGTCCTACACTCG
CTGTAGCCTGCAGCCTGTACCCCTCCAGCGCAGCTTGCAAGCATCCACGACCCATTCATCATTTTCTGGCTGCTCCGGCT
TAATGACACCCCTTCCATAACCTTCTCCTCATTTGACGTCCATGCCCCTGCCTCCCTCCAACAACCCGCGCCACCTCACG
CGGGGGCACCCACGTAATTTCTCCCAG----------GGCGAGGGCGGCCTATCTGGCCAGCCCATTATATATCGCTCTC
ATGGCACCGTGGCTCATGTACTGCTGCCCATTGATAGGCTGGTGATCACTGCTGTCGAGAGGAA----CTACGCATCCAT
CCCTTCCGCCCCCAGCTACCTCGCTTGCTCCACGTAAGTTTCCGTTCCTTCTAGCTTCCCTTGTTGTCTCCTTGGCTTCT
CCTTGTGATGAGAAAAAATCTCATGGAGTTTTGCGCCTCCTTTGTTCTTCTGTTGGAGTAGGCATCGTCTTTGAAGGAGA
GGAAGATGACGAGCGTATGGAAGACCAAGGTTCTCCCCGGGCTCAACAAGATCTTCGACAAGGATGGCAAGAAGGCCGCC
TCCGCCGAGTTCTTGAAATCCTTCAACAAGGTACGTTGAGCTCCGGGCTCTTGCAAAATTCTTGTGAAATTTGCGCGTTA
CGAATTTTTGAAATGATAGATGATGTCTGTATACACGTGTTTTGCTTGCTTGTTGATTGTGTGGGCGTGCTCTGTGTGTG
TAGGAGGAGATTGACAAGGAGATTGAGGACAAGAAGACAGAACTAGAGCCCAAGGTTGTGGAGACCATTGAAGCATCTCC
TCCAGAAATTAAGGTGAAAAGATTTTTTTGGGGGGGTTCCTAATTAGTATTGGTTTTGTGTGGTTGCTTAGGACATAACA
GTAGGAAGTAGCCACCTTGAATCCTTAATTAGTGCTAATCATACTGTTATCTTGTTGTAGGGCTTGATAAAGGATAAGAA
AACATCCAAGATCAAGAAGAACTCAGTTGCCGTCACCAAGTTCCTTGACGATTTGGCCAAGATTGGTAA--TTTTTTTGT
TGCTTAAATTTTGCAAAATAAAATATTGTGAAAAAAA-----GGATTAAATACAAAAATGGAATTA-TTTTAGCAATCTT
ATCAGGTAATTTCTTAGGGTCCGTATCTTAAATAACCTTTATTCCTTGCCTTTTGAACAAAATAACC-TTCATTATCCTG
CTTTCACATAACTAAACTTTA-----GAGGTATCTTGTTAGAACAAAAAGAAGACAAACAAAGTAATGGAATCTTCTCAC
ATATGTTTCTTGCAACAGAAGTTCCCATGCAAACAGTACCGTTGCTTTTAGGCGATGCAGACAAAACCATAACATGTGCA
ATTAACAAAAGATGAACAA-TTAACTGTAATTAA-----------------------TTGCCAT-------AGGTGCACT
CAGCTCTCGGGCATACTGCTGAGAGCTTTGTGAGTTCTAGAATAAAGAACACTCTTAATCATTAGTTAATTAAATTAGT-
-TATATCTAACTGACATATGCTAATGAAACTATCGAGCTAATCAGCGTTGGTTAATATGCAGATTTCCCCGGAGCCAAGC
TGGTGAGCGACGCGGTGGCCAAGTCCGGCACCACGCCCCTCTCCCCGGCCATCGTCTTCATCTTGGACAAGGTTGCGCCC
TTCGTCCCAGCGCCCAAAGAGGAGCCCAAGGCCGAGCCCGAG------GACGCCGCCCCGGCAGAGGAGACCACCACCCG
CGAGGTCGCCGT---GGAGGAGAAGAAGGAGGAAGCCGAGCCCTCCGCCGCACCGGCAGAAGCGGCCGCGCCGGTGGAGG
CAGCCGCGCCCGCTGCTGAGGTAGTGGAGGAGAAGAAAGAGGAGGAGAAACCCGCGGAAGCCGCCGCACCTGCCGCCGAG
GAGCCAGAGAAGAAGTGATCGGTCGCCGCCGGCCGGAGTCCAAGAGCAACCCAAGCTACCACCTAGCTTGCTGCTGGTAA
T--------GAAAACATTTTAAGTTATTGTGAATTTGTGGTCGCTCTCTGTGTCAAGGTAGCTGCACAAAAGTAAGCACG
TACGTACGT-ACACTGCACTTGCCATGCATACCACGCATGCAAACGTACACGCATGGAACATTTGTTATTCTTTCGATGG
ACCGGTCTCCTCACCGTATGTGTACATTTTACGTGGGGCTTTCTTGCTTTTTTGTGGTGGTTAAAACCTGTGTAATTATG
ATTATATTGGTGTGTTAATTTGTTGGTCATGGTATAAGCAGGAACTTGTGCATTCTTCCTCTTCTTGAACTTGTGCAAAC
CCTGGATGAATCATATAGAGCCCGGCTGTTGATATGGTTGATTTTACCGTCATTCACATCAGAGTGGATTAACAACAATG
GCTTTGCATGCATACGCCTCC--------------------------------------GGTCAAGTTTCACAAGATGT-
-AGATAAGCACGAGGGAAGTCGGTAGGAAACTGATGGAGGTGGCGTACCAAATCGTGGCACGAAACCTAGAAACCGATCG
ATGGAGATAGATAGCTTTGGGACATAC-TATACTGACATTGCACATAATTATCTCGTTTGCTTAGCCAAATCAGTGAAAA
A-AATCAATCAGTGCCGGTCGGAAAGGGACGTGAGCTCAATCCTATCGCCCGGCCGCACGACACGCCTCTGGCTCATCAG
CCT-----GAGATCTCGATCTCTCAGAGGCCCCGCATGGACGGGCCTGCGTGACGTACGTGCCTGCGTGCACCCAAATTA
TTTCTAATTATTTGTAATTAACAAG----GCTCACCATTGATCCATCCACTGATGGGTACACGCAGGAGGATAAAGGAGA
CGTTTCAGTCGAAATAAAAGGGGTTGATTGTGATCGTTTCTGGGTTGGTGTTTCGTTCTGTCCGTCCGGGCAAAGCAGTG
AACCACGCACGGTGCCTTGTGCCTTTGTC--
>chr3A_3
--TTTACGAATAAAATTTATTTGAGCGCAGTTTGTTACGTGTATTCGTATCATCAAATGATCGACGTGTATGTGGTTGCA
TGTATTTGAGATTTTGAAAGTGAGGGATGTGATTGCAC-GGCAAACATTTGAGGGGAGCTATCTGGGATGCATCCGCAAA
CATATAGCGGGTAAGATTTATACATTGTTGTAGATGGTCTAAGTGTCTAACGTGTTGGAATAGAACAACTATATATTTGT
ACTCCAACATGCATAGGTAAATTT---CATTTTGCGAAA--TTTTTAGGTGAAAATAGAAGCTAAATATTTAAGATTCTA
TTTCACAACTTTTTTTGCGTGTATCCATTTCACAACAAAAAATAAAATGAGGTACATAATTCTCAAAATACAGCAAGTTT
TTGCCGGGAGGAATTTTTAATTCTTGACACATCTCGCATCCATTTATATATAAAAAGGTGAACTATTAACCGTCTCAAAT
CATTTGTGCAACTTGCAGGACAATTAATCAGATTACCAAAGTCATAGCACAGACGATCCCAACAACATGTCCTACAGTCG
CTGTAGCCTGCAGCCTGTACCCCTCCAGCGCAGCTTGCAAGCCTCCACGACCCATTCATCATTTTCTGGCTGCTCTGGCT
TAATGACACCCCTTCCATAACCTTCTCCTCATTTGACGTCCATGCCCCTGCCCCCCTCCAGCAACCCGCGCCACCCAACC
CGGGGGCACCCACGTAATTTCCCGCAGGGCCAGGCCAGGCCAGGGCGGCCTATCTGGCCAGCCCATTATATATCGCTCTC
ATGGCACCGTGGCTCATGTACTGCTGCCCATTGATAGGCTGGTGATCACTGCTGTCCAGAGGAAGTTCCTACGCATCCAT
CTCTTCCGCCCCCAGCTACCTCGCTTGCTCCACGTAAGTTTCCGTTCCTTCTAGCTCCCCTTGCCGTCTCCTTGGCTTCT
CCTTCCGATGAGAAAACATCTCATGGAGTTTTATAAT---TGTGTTCTTGTGTTGGAGTAGGCGTCGTCTTTGAAGGAGA
GGAAGATGACGAGCGTGTGGAAGACCAAGGTTCTCCCCGGGCTCAACAAGATCTTCGACAAGGATGGCAAGAAGGCCGCC
GCCGCCGAGTTCTTGAAATCCTTCAACAAGGTACGCCGAGCTCCGGGTTCTTGCAAGTTTCTTGTGAAATTTGTGCGTTA
CGAAATTTTGAAATGGTAGATGACGA-TGTCTACATGTGTTTTGTTTGCTTGTTGATTGTGTGGGCGTGCTCTATGTGTG
TAGGAGGAGATTGACAAGGAGATTGAGGACAAGAAGACAGAACTAGAGCCCAAGGTTGTGGAGACCATTGAAGCATCTCC
TCCAGAAATTAAGGTGAAATGATTTTTGTTTC--GGTACCTAATTAGTATTGGTTTTGTATGGTTGCTTAGCACATAACA
GTAGGGAGTAGCCACCTT--------AATTAGTGCTAACCATACTGTTATCTTGTTGTAGGGCTTGATAAAGGATAAGAA
AACATCCAAGATCAGGAAGAACTCAGTTGCCGTCACCAAGTTCCTTGACGATTTGGCCAAGATTGGTAATGTTTTTTTGT
TACTTAAATTTTGCAAA--AAAATATTGTGAAAAAAATAAAAGGATTAAATACATAAATGGAATTACTTTTAGCAATCTT
ATCGGGTAATTTCTTAGGGTCCATATTTTAAATAACCTTTATTCCTTGCCTTTTGAACAAAATAACCTTTCATTATCCTG
CTTTCACATAACTAAACTTTAATTTAGAGGTATCTTCTTAGAACAAAAAGAAGACAAAGC----AATGGAATCTTCTCAC
ATATGTTTCTTCCAACAGAAGTTCCCATGCAAACAGTACCGTTGCTTTTAGGCGATGCAGACAAAACCATAACATGTGCA
ATTAACAAAAGATGAACAAATTAACAGTAATTAATTAAGCTGCACAATTTTTCATTGTTGCCAC-------AGGTACACT
CAACTCTCGGGCATACTGCTGAGTC--TTGTGCGTTCTAGAATAAAGAACACTCTTGATCATTAGTTAATCAAATCAATT
ATATATCTAACTGACATAGGCTAATGAAACTATCGAGCTAATCAGTGTTGGTTAATATGCAGATTTCCCTGGAGCCAAGC
TGGTGAGCGACGCGGTGGCCAAGTCCGGCACCACTCCCCTCTCCCCCGCCATCGTCTTCATCTTGGACAAGGTTGCGCCT
TTCGTGCCCGCGCCCAAGGAGGAGCCCAAGGTCGAGCCCGAGGTCGCCGCCGCCGCCCCGGCAGAGGAGACCACCACCCG
CGAGGTTGCCGTGGAGGAGGAGAAGAAGGAGGAGGCCAAGCCCTCTGCCGCACCGGCAGAAGCTGCCGCGCCGGCGGAGG
CAGCCGCCCCC---GCTGAGGTAGTGGAGGAGAAGAAAGAGGAG---AAACCCGTCGAAGCCGCCGCACCTGCCGCCGAG
GAGCCAGAGAAGAAGTGATCGGTCGCCGCCGGCCGGACTCCAAGAGCAACCCAAGCCACCACCTGGCTTGCTAGCTGCTG
GTAATGGAAGAAATCATTTTAAGTTATTGTGAATTTGTGGTCGCTCTCCGTGTCAAGGTAGCTGCACAAAAGTAAGCACG
TACGTACGT-ACACTGCACTTGCCATGCATACCACGCATGCAAACGTACACGCATGGAACATTTGTTATTCTTTCGATGG
ACCGGTCTCCTCACCGTATGTGTACATTTTACGTGGGGCTTTCTTGCTTTTTTGTGGTGGTTAAAACCTGTGTAATTATG
ATTATGTTGGTGTGTTAATTTGTTGGTCATGGTATAATCAGGAACTTGTGCATTCTTCCTCTTCTTGAACTTGTGCAAAC
CCTGG--------------------CTGTTGATATGGTTGATTTTACCGTCGTTCACATCAGCGTGGATTAACAACAATG
GCTTTGCATGCATACGCCTCCTCCCAAGTGGAGTACTAACTAGAAACCTCGATCATTCCGGTCAAGTTTCACAAGATGTG
TAGATAAGAACGAGGGAAGTCGGTAGGAAACTGATGGAGGTGGCGTACCAAATCGTGGCACGAAACCTAGAAACCGGTCG
ATGGAGATAGTTAGCTTTGGGATATAC-TATACTGACATTGCACATACTTATCTCTCTTGCTTAGCCAGATCAGTGAAAA
AAAATCAATCAGTGCCGGTCGGAAAGGGACGTGAGCTCAATCCTATCGCCCGGCCGCACGACACGCCTCTTGCTCGTCAG
CCGGACCGGAGATCTCGATCTCTCAGAGGCCCCGCACGGCCGGGCCTGCGTGACGTACGTGCCTGCGTGCACCCAAATTA
-------TTACTAGTAATTAACAAGGCTCGCTCACCATTGATCCCTCCACTGATGGGTACACGCG---GGATAAAGGAGA
CGTTTCAGTCGAAATAAAAGGGGTTGATCGTGATCGTTTCTGGGTTGGTGTTCCGTTCTGTCCGTCCGGGCAAAGCAGTG
AACCACGCACGGTGGCTTCTGCCTTTGTC--
>SNPs
------S-------------------S-S--------S------S------------------S--------S-------
-----------------------------------------------------------------S--------------
---------------------------------------------------S---------------------------S
-----------------------S--------------S-S----S-----------S---S-----------S----S-
-------------------S-S---------------S--------------------S-----S--S----S---S---
-----S------S-----------------S-----------S----------S--------SS----------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
----------------------------------------S-----S-------S------------------------S
S--------------------------------S--------------S--S----------------------------
-------------------------S----------------------------S----S-----S--------------
------------------------------------------------------------------------------SS
---------------------------------S----------------------------S-----------------
------------------------S-------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
S---------------------------------------S-------S---------------SSSSSSS-----S---
-S-----------------------------------------------------------S--------S---------
-------------------------S----------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
----------S---------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------S-----------------------------------------
--------SS----------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------S---------------
--S----------------------------------S------------------------------------------
--------------------------SS----------------------------------------------------
------------------SS--------------------------------------------------S--S--S---
-------------------------SS-----------------------------------------------------
--------------------------------------------------------------------------------
--------------S--------------------S----------S---------------------------------
----------------------S------SS
>forward_443
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----------------------CTTGACAGCTCTCCCATCCAA-------------------------------------
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>reverse_1988
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-------------------------------------------------------------------CCACAGGTAGACT
CGGCTCT-------------------------------------------------------------------------
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>forward_1175
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------------------------------------CGAGTTCCGGCTTCTTGCT-------------------------
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>reverse_3219
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------------------AAGGAAAGGGACGTGAGCTC------------------------------------------
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-------------------------------
