>input_sequence_52229
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----------------------------ATGAGCAACATCTCTCCTTCATTCAGCGCCCCCACCCTTCTGGCCACGTCCT
CCTCCTTTCGTCATTTCTTTCCCCTCGGCAGCACCAAGAAGGCCAAGCCTGTCCTCCCCTCTACCCGTCCTGAGCCTCCT
ATGCACCGCATCGATATTACCCACTTCATCAATTTCAAGTTAGATCTCGCCGCAAACAACTACGCTGAGTGGACGCGGAA
GTTCTACGCTATCCTCGCCAAATACGACTGCGCCCACCATGTCGACCACGAGTCTGATCCCCGTCTTCAAGATGCCAAGT
GGCGCAACGACGATCTGACCATTGTGTTGTGGTTCTATGCTACCATTTGCGACGAGCTCTATCAAGTGGTGAGGGAGCCG
GAGAACACCGCGTATACCGTTTGGGACAAGTTGTACACCTTCTTCCGGGACAACCAGCCCGGATGGGCCATCCACATCCG
CGAAGAGTTAAGCGCCACCGAGCAAGGAGACATGACGGTGGCCGCCTACTGCAATCGGATTAAGGCCCTCGCCGATGCCC
T---CGACGCAAGTGAACCAGTTAGCGATGATATGTGGACATTGCAAATGATCCGAGGACTCAACAACCGCTTCCATGTG
CTGGCAACTACTCTTCCCATGCACAGGCCTTTTCCTACCTTTATCCAGGCCCGTTCCATGTTGTTGCTGGAAGAAATCAA
TCTTAATGCATGTGACAGGGCCAAGGGATCCTCCACCATCACCATTGGCACCAACACCGGCTCCAACTCCACCCCCGGTA
GAAGCAACAATGGGAATCAAGGCGATCGCAACGCTTTTTCTAACACCTGGCCTGGACAGTCGGCACAACCGCAACAACGA
CCCTGGATGGGCTACTTTGCGCCATGGGGGGCGCCCTTCCCGTTGCTGAGGCAGCCGCCGCACACTCAGCGGGCCCCTCA
AAACGCCCGCGGCGTCCTCAACCCACGCCCATCTGCTCCAACTCAGGGATACTCGTTGCTCAACTCCATGGCATCCATCT
TTATGC--------------------------------------------------------------------------
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--------------------------------------------------------CGTCGCCTCTTTCGCGGGACCAGT
TCTCCGTGATCGACAGGGCGCCCGGCAACACAAGCTCCACCCCTCCTCCGACAATGACTAGTACATGGACTATGCCGC-T
AATCGCATGTGACGGGTTGCAGAGGTAATCTCAACTAGTATCTTTTCTCTTCAATGCACGCTTGTCGTAGTTTAGTTGTT
AGTGATGGTTCCTGGATCACCATTATTCCTACTAG-TTATACTCATCTCGGTCATACTCCCCCTTTCTCTCAACAATGTT
TGATGTTTTACTCTTGATTGTTAATGACTTCATACCCATATGCAATTTTACTCGGGGCAATTCTTGTTCTATTGAATTTG
ATCCATATGTTTGTTTTGTGAATGATCTAGCCACCAAGGGAATCATCGGGAGATCTAG----------------------
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>chr4A_1_TraesCS4A01G029900
TTCAGTTACGATTAGCTT-TGCAGTGATCAGATCGCCACGTCGGTGCGTGCGCGCCAGCCGTCCGTGGCTCGTCTTTCGT
TACCGGTGCGTGCCTTGCCGTGTACACTCGTGG----CCGGCTTCGTCTTTCGGCGGAACAGTTTGTGCATGCATGCATG
CCGCGCCGCATGCCTGTGCGGACGTGCACGCCATGGCTGAAACTTTTGGTTTGGGTTGGTGAATGGTGGCCACGGGACAA
AACTCGTTGGAATCAGTCGCATGAATGGCTAATATCGGTGGTGGGTGGTGGTGCAGTGCGGCATAAGTTTCCCACAGTAA
GAACTGCACGACACTG------------------------------TATTAGCCATCCGTGTGCCTCGTTCCAACAAGTT
TTGTCTCGTGGTCACCACCTACCACTCCAAACCAAAAAGTTTAGCCATCGCGTGCACGTCCGCACAGGC-ATGCGGCGCG
GCCGGCATGCACGCACAAACTGGCCCGCCGAAAGCCGAAGCCGGTCGGTCACAAGTGTACACGGCAACG------CCGGT
AGCAAAAGGCCAGCTATGCACGGCTGCCCCGCACACACCGACGTGGCGTTCTGATCATTGCAAAAGCTAATCGTAACTGG
AGATGAAAACCTCACTCTAGCTCATCACTTACCGTCACCGATCGAATTACCCGTCATGTCACAGTG--------------
-----------TCATCGTACGCGTCAATCGATCAGACTGTGATGTGATCTCACTAATCGTGGAATCACGGTGACAATTCG
CCTCCTGCATCGATCAGATCCGCTACCCACTACGCAGTACTACGGGTAGGAGTACTACCATGCGTCTCGTCCATCATTTT
GTCCCAAGCTCCCCACCAGCCAAATTCTGGTATACTTTTACTGTTGTTGTAATAAATCTCTCTCCTATGGTTCTACCCCT
TGTGA-TGTGTATATAAACAGGGCAGCGAGTGAACACAAGACATCTTCGAGATTATACTCACAAGTCACAATCGTTCTTG
GTATCACAACCATCTTCTCCTCTTCACCATGAGCAACATCTCTCCTTCATTCAGCGCCCCCACCCTTCTGGCCACGTCCT
CCTCCTTTCGTCATTTCTTTCCCCTCGGCAGCACCAAGAAGGCCAAGCCTGTCCTCCCCTCTACCCGTCCTGAGCCTCCT
ATGCACCGCATCGATATTACCCACTTCATCAATTTCAAGTTAGATCTCGCCGCAAACAACTACGCTGAGTGGACGCGGAA
GTTCTACGCTATCCTCGCCAAATACGACTGCGCCCACCATGTCGACCACGAGTCTGATCCCCGTCTTCAAGATGCCAAGT
GGCGCAACGACGATCTGACCATTGTGTTGTGGTTCTATGCTACCATTTGCGACGAGCTCTATCAAGTGGTGAGGGAGCCG
GAGAACACCGCGTATACCGTTTGGGACAAGTTGTACACCTTCTTCCGGGACAACCAGCCCGGATGGGCCATCCACATCCG
CGAAGAGTTAAGCGCCACCGAGCAAGGAGACATGACGGTGGCCGCCTACTGCAATCGGATTAAGGCCCTCGCCGATGCCC
T---CGACGCAAGTGAACCAGTTAGCGATGATATGTGGACATTGCAAATGATCCGAGGACTCAACAACCGCTTCCATGTG
CTGGCAACTACTCTTCCCATGCACAGGCCTTTTCCTACCTTTATCCAGGCCCGTTCCATGTTGTTGCTGGAAGAAATCAA
TCTTAATGCATGTGACAGGGCCAAGGGATCCTCCACCATCACCATTGGCACCAACACCGGCTCCAACTCCACCCCCGGTA
GAAGCAACAATGGGAATCAAGGCGATCGCAACGCTTTTTCTAACACCTGGCCTGGACAGTCGGCACAACCGCAACAACGA
CCCTGGATGGGCTACTTTGCGCCATGGGGGGCGCCCTTCCCGTTGCTGAGGCAGCCGCCGCACACTCAGCGGGCCCCTCA
AAACGCCCGCGGCGTCCTCAACCCACGCCCATCTGCTCCAACTCAGGGATACTCGTTGCTCAACTCCATGGCATCCATCT
TTATGC--------------------------------------------------------------------------
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--------------------------------------------------------CGTCGCCTCTTTCGCGGGACCAGT
TCTCCGTGATCGACAGGGCGCCCGGCAACACAAGCTCCACCCCTCCTCCGACAATGACTAGTACATGGACTATGCCGC-T
AATCGCATGTGACGGGTTGCAGAGGTAATCTCAACTAGTATCTTTTCTCTTCAATGCACGCTTGTCGTAGTTTAGTTGTT
AGTGATGGTTCCTGGATCACCATTATTCCTACTAG-TTATACTCATCTCGGTCATACTCCCCCTTTCTCTCAACAATGTT
TGATGTTTTACTCTTGATTGTTAATGACTTCATACCCATATGCAATTTTACTCGGGGCAATTCTTGTTCTATTGAATTTG
ATCCATATGTTTGTTTTGTGAATGATCTAGCCACCAAGGGAATCATCGGGAGATCTAGTTGTTCGAAAGATCTATATTCG
CTTTTCTACATAAATAAAGGTGGCCCCTCGATCT-------CAACATGTGGCATCGGCGACTTGGAC--CTAGGGCAAGC
TTCGTTAGTGGCCATGACAAAAAAAAAGTCTTCCTTCTTGTGATAAGCCAATGCAGCCATCACATGTTTGTGA---TTGT
CAATTAGGGTGGCAACCTCGATTGCCTTTTCTTATTTGTCTTTA-TATATCACCTTTCCAAAATACATTGTGATTTGTGG
ACTGTGCCAATTTATAGTTTCTCTGGTTCCCAGTACTACCCTGT--CATTTTATATGACTGTTCTCATTATTCCTGAATA
TTTTCCCTTAGAAACAAATCTGGTACAACTAACAACTTGCAACGTTTTCTATAACTGACAAGTGGGCCCTGGTTAGTTGG
TTAGCCAGCTG-TTTAATTAGGTAAGGCTAAGTTTAACCATCATGGGTCCCAGC-GTCAAGTTTGACCTGCCCACGCCAG
CTTTGATTGCCCCCACTACCACTACAAACTTTGCTCTATTTTGCAACGCTTCACTTGTGTCATGTATAACCCACTTTCAT
CATGGAAAATAGATACTCTAGCGACATTTTTCGGTCACCGCTCCCACCATCACTGAAGCGCCGTCATAGAAAATAAAATT
TTGACGGTACCACTTTTTTCGTCACGCAAGTTGGCATATTAGGTGACAGACAAAAAAATGTCACCAGTGATCATGTTCGG
TGACTGATGAAGACACGTACCTAGGGTAGGGACACAGACCTGATCAAAGAGTCCTACCCTAGGACACCCCTAGGAGAAGT
CACCTTTCAATCGACTTGAAGGTATCCCACTCGACGGGTTCAAGACACTCGACCAAGAAGCTATCACTCGACCATGAAGC
CAACCACTCGACTGACAGGAGACCTAAAGTCACTCCGCAGGCAAACGGTCGGCTGTTAAGTAGTCTTTATGATCATTATA
GCACTTTATTAGGGACGTTACCAGAAACGCCCAAC
>chr4D_1
TTCAGTTACGATTAGCA--TGCACTGATCAGATCGCCACGTCGATTCGTGCGAGCCAGCCGTCCGTGGCTCGTCTTTTGC
TACCGGTGCGTGCCTTGCCGTGTACACTTGTGG----CCGCCTTCGGCTTTCGGCGGAACAGTTTGTGCGTGCATGCTTG
CCGCGCCGCATGCCTGTGCGGACGTGCACGCCATGGCTGAAACTTTTGGTTTGGGGTGGTGAATGGTGGCCACGGGACAA
AACTCGTTGGAATCAGGCGCACGGATGGCTAATATCGGTGGTGGGTGGTGGTGCAGCGCGGCATAAGTTTCCCGCAGTAA
GAACTGCACGACACTG------------------------------TACCAGCCATCCGTGTGCCTCATTCCAACGAGTT
TTGTCCTGTGGCCACCACCTACCACACCAAACCAAAAAATTTAGCCATCGCGTGCACGTCCGCACAGGC-ATGCGGCGCG
GCGGGCATGGACGCACAAACTGTCCCGCCGAAAGCCGAAGCCG----GTCACAAGTGTACACGGCAAGG------CCGGT
AGCAAAAGGCCAGCGACGCACGGCTGCCCCGCACTCATTGACATGGCGATCTGATCATTGC-AAAGCTAATCGTAATTGG
AGATGAAAACCTCACTCAAGCTCATCACTTATCGTCACCGATCGAATTACCCGTCATGTCATAGTGTCACATCACACACA
AAGCTAAAAACTCATCGTACGCATGAATCGATCAGATTGTGATGTGATCTCACAAATCGTAGAACCGCGGTGGCAATTCG
CCTCCTGCATCGATCAGATCCGCTACCCACTGCGTACTACT---GGTGGGAGTACTACCATGCGTCTCGTCCATCATTTT
GTCCCAAGCTTCCCACCAGCCAAATTCTGGTGTACTTTTACCGGTATTGTAATAAATCTCTCTCCTGCGGTTCTACCCCT
TGTGA-T--GTATATAAACAGGGCAGCGAGCGAACACAAGACATCTTCGACATTATACACACAGGTCACAATCGTTCTTG
GTATCACAACCATCTTCTCCTCTTCACCATGAGCAACATCTCTCCTTCTTTCAGCGCCCCCACCCTTCTGGCCACGTCCT
CCTCCCTTCGTCATTTCTTTCCTCTCGCCGGCAGCCAGAGCACCAAGCATGCCATCCCCTCTACCCGTCCCAAGCCTCCT
ATGAACCGCATCAATATTACCCACTTCATCAATTTCAAGCTAGATCCCGCCGCAAACAACTATGCTCAGTGGACGCAGAA
GTTCTACGCTATCCTCACCAAATACGACTGTGCCCACCATGTCGACCACGAGTCTGATCCTCGTCTTCAAGATGCCAAGT
GGCGCAACGACGATCTGACCATTGTTTTGTGGTTCTATGCTACCATTTGCGATGAGCTCTATCAAGTGGTGAGGGAGCCG
GAGAACACCGCGTATACTGTTTGGGACAAGTTGTACACCTTCTTCCGGGACAACCAGCCCGGATGGGCCGTCCACATCCG
CGAAGAGTTAAGCGCCACTGAGCAAGGAGACATGACGCTGGCCGCCTACTGCAATCGGATTAAGGCCCTCGCTGACGCCC
TCGCCGATGCGGGTGAACCAGTCAGCAATGAGATGTTGACATTGCAAATGATCCGAGGACTCAACAACCGCTTCCATGTG
TTGGCAACTACTCTTCCCATGCACAGGCCTTTTCCTACCTTTATCCAGGTCCGTTCCCTGCTGTTGTTTGAAGAAATCAA
TCTTAATGCGCGTGACAGGGCCAAGGGATCCTCCACCATCACCATTGGCACCAACACCGGCTCCAGCTCCACCCTCGGTG
GAAGCAACAATGGGAATCAAGGCGATCGCAACGCTTTTTCTAACACCCGGCCTCGACATTCGGCACAACCACAACAACGA
CCCTGGATGGGCTACTTTGCGCCATGGGGGGCGCCCTTCCCGTTTCCGAGGCAGCCGCCGCACACTCAGTGGGCCCCTCG
AAGCGTCGGCGGCGTCCTCAACCCACGCCCATCTGCTCCAACTCAGGGATACTCGTTGCTCTACTCCATGGCATCCATCT
TTATGC--------------------------------------------------------------------------
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--------------------------------------------------------CGTCGCCTCCCTCGCGACACCGGT
TCTCCGTGATCGACGCGGCGCCCGGCAACACAAGCTCCACCCCTCCTCCAACAATGACTAGTACATGGACTATGCCGCGT
AATCGCATGTGACGGGTTGCAGAGGTAATCTCAACTAGTATCTTTTCTCTTCAATGCA--CTTGTCGTAGTTTAGTTGTT
AGTAATGGTTCCTGGATCACCATTACTCCTACTAG-TTATACTCATCTCGGTCACACTCCCCCTTTCTCTCAACAATGTT
TGATGTTTTACTCTTGATTGTTAATGACTTCATACCCATATGCAATTTTACTCGGGGCAATTCTTGTTCTATTGAATTTG
ATCCATATATTTGTTTTGTGAAGGATCTAGCCACCAAGGGAATCATCGGGAGATCTAGTTGTTAGAAAGATCTATATTCG
CTTTTCTCCATAAATAAAGGTGGCCCCTCGATCTGCTCCATCAACATGTGGCATCGGCGACTTGGACACCTAGGGCAAGC
TTCGTTAGTGGCCATGGCAAAAAAAAAGTATTCCTTCTTGTGATAAGCCAATGCGGCCATCACATG--------------
---------------------------TTTCTTATTTGTCTTTACTATATCACCTTTCCAAAATACATTGTGATTTGTGG
ACTTTGCCAATTTATAGTTTCTCCGGTTTCCAGTACTACCCTAT--CATTTTATATGACTGTTCTCATTATTCCTGAACA
TTTTCCGTTAGAAACAACTCTGGTACAACTAACAACTTGCAATGTTTTCTTTAACTGACAAGTGAGCCCTGGTTAGTAGG
TTAGCCGGCTGATTTAATTAGGTAAGGCTAAGTTTAACCATCATGGGTCCCAACAGTCAGGTTTGACCTGCCCACGCCAG
CTTTGATTGCCCCCACTAGCACTACAAACTTTGCTCTATTTTGCGACGCTTCACTTGTGTCATGTATAACCCGTTTTCGT
CATCGAAAATACAT----TGGCGATGTTTTTCGGTCGTCGCGCCCACCATCACCGAAGCGCTGTCATAGAAAATAAAATT
TCGACGGTACCACTTTTTTCGTCACGCAAGTTGGCATATTAGGTGACGGAA-CAAAAATGTCACCAGCGATCGTGTTTAG
TGAC----------------------------------------------------------------------------
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-----------------------------------
>chr4B_1
TTCAGTTACGATTAGCA--TGGACTGATCAGATCGCCACGTCGATTCGTACGAGCCAGCCGTCCGTGGCTCGTCTTTTGC
TACCGGTGCGTGCCTTGCCGTGTACACTCGTGG----CCGGCTTCGGCTTTCGGCGGAACAGTTTGTGCATGCATGCTTG
CAGCGCCGCATGCCTGTACGGACGTGCACGCCATGGCTGAAATTTTTGGTTTGGGTTGGTGAATGGTGGCCACGGGACAA
AACTCGTTGGAATCAGACGCACGGATGGCTAATATCGGTGCTGGGTGGTGGTGCGGTGCGGCATAAGTTTCCCACGGTAA
GAACTGCACGACACTG------------------------------TATTAGCCATCCGTGTGCCTCGTTCCAACAAATT
TTGTCCCATGGTCACCACCTACCACTCCAAATCAAAAAAATTAGCCATCGCGTGCACGTCCGCACAGGGAATGCGGCGCG
GCCGGCG--------CAAACTGGCCCGCCGAAAGCTGAAGCCG----GTCACAAGTGTACACGGCAACG------CCGGT
AGCAAAAGGCCAGCCACGCACGCCTGCCCCGCACACATCGACGTGGTGATCTGATCATTGC-AATGCTGATCGTAACTGG
AGATGAAAACGTCACTCTAGCTCATCACTTACGGTCACTGATTGAATTACCCGTCATGTCACAGTGG-------------
------------CATCGTACGCGTCAATCGATCAGACTGTGATGTGAGCTCACTAATCGTGGAATCACGGTGAGAATTCA
CCTCCTGCATCGATCAGATCCGGTACCCACTACGTAGTACTACGGGTAGGAGTACTACCATGCGTCTCGTCCATCATTTT
GTCCCAAGCTCCCCACCAGCCAAATTCTGGTATACTTTTACTGTTGTTGTAATAAATCTCTCTCCTATGGTTCTACCCTT
GTGATGT--GTATGTAAATAGGGCAGCGAGTGAACATAAGACATCTTCGAGATTATACTCACAAGTCACAATTGTTCTTG
GTATCACAACCATCTTCTCCTCTTCACCATGAGCAACATCTCTCCTTCATTCAGCGCCCCCACCCTTCTGGCCACGTCCT
CCTCCCTTCATCATTTCTTTCCTCTCGCTGGCACCCAGAAGGCCAAGCCTGTCCTCCCCTCTACCCGTCCCGAGCCTCCT
ATGCACCGCATCGATATTACCCACTTCATCAATTTCAAGCTAGATCTCGCCACAAACAACTACACTCAGTGGACGTGGAA
GTTCTACGCTATCCTCACCAAATACGACTACGCCCACCATGTCGACCACAAGTCTGATCCCCGTCTTCAAGATGCCAAGT
GGCGCAACGACGATCTGACCATTATGTTGTGGTTCTATGCTACCATTTGCGATGAGCTCTATCAAGTGGCGAGGGAGCCG
GAGAACACCGCGTATACCGTTTGGGATCAGTTGTACACCTTCTTCCGGGACAACCAGCCCGGATGGGCCATCCACATCCG
CGAAGAGTTAAGCGCCACCGAGCAAGGAGACATGATGGTGGCCGCCTACTACAATCGGATTAAGGCCCTCGCCGACGCCC
TCGCCGACGCAGGTGAACCAGTCAACGATGAGATCTTGACATTGCAAATGATCCGAGGACTCAACAACCGCTTCCATGTG
CTGGCAACTACTCTTCCCATGCACATGCCTTTTCCTTCCTTTATCCAGGCTCGTTCCCTATTGTTGCTCGAAGAAATCAA
TCTTAATGCGCGTGACAGGGCCAAGGGATCCTCCACCATCACTATTGGCACCAACACCGGCTCCAACTCCACCCCCGGTG
GAAGCAACAATGGGAATCGAGGCGATCACAACGCTTTTTCTAACACCTGGCCTGGACAGTCAGCACAACCACAACAACGA
CCCTATATGGGCTACTTTGCGCCATGGG-GGCGCCCTTCCCATTGCCGAGGCAGCCGCCGCATACTCAGTGGGCCCCTCG
AAGCGTCGGCGGCGTCCTCAACCCACGCCCATCTGTTCCAACACAGGGATACTCGTTGCTCTACTCCATGGCATCCATCT
TTATGTTAGCAAATAAACTAGCGTGACAGGTTCAAGTTCAGGTTAGACGTAGTGTTAGGATTCAGTTTCGTCAGTCTGCA
GTTTTTTCGGTGTTCTGTTTCAGTCAAGCCTAAGGACGCGGTATGTGTGATCCCGAGGCCGTAGCTCGCGGCGAGCGCAT
GCCCATGATCGTGGGATGGCACGATCCAGTAGATGGGGCACGCCTCGATCCGCCTTTCCCATTTTCCAGTGAATAAAAAG
AGGAGGGGAAAAGCAACAAAGTTTGTACTACACAAAACTCAGTCCACTTCGTGTCCCTTTCTCCCTTGCCATTGACAGGA
GCTTTGAGCTCAGAGATAATAATTGGCATCAGAGCGCCTTGTTTGCGATCTAGGGATGACGAAGAAGGACGACACCGACG
ATGGCAAAGCACCACCGACGCCGCGTGCTCGAATCGCTGATGGCTCAGATCAGGGTTCGTCTGCGCGGCTGGTGCACGAC
ACCGGCGACACGACGTGGCCGATGCTGACGAGGACCAACTACACCGACTGGGGCGTGCTGGGATGGTGTGCGGGATGCAT
GTGGTGGATCACGTGGAGCAGCTCTGCGACGTCTGCCTGGCAAGGAAGTAGCGGCGCACTCCCTTCCCATCGCAGGCGCG
CTATCGCGTGGAGAGGCCACTTGAGCTCATGCACGCTGACATCTGCGGGCCAATCACTCCGGCCACACTCGGTGGTAAGA
GGTAGTTCATGTTGATTGTCAATGATCACAACCGCTACATCTAGGCAGTGATGCTGCCAGCAAAGGATGCCGCTACGGAC
GGCATCAAGCGCTTTGTTGCCGCGGCGGAAGAAGAGCTGGGGGTGCGGCTCCGCACGTTCCGCACGGATCGAGGCGGGGA
GTTCACCTCCGGCGTGCTTGGTGATTACTTCACGGACCAGGGCATGCAGAGACACCTGACGGCGCCATATTCACCCTAGC
AGAACAGCGTCGTGGAGCGGCGCAACCAGACGGTCGTTGGCATGGCACGGACTATGCTCAAGGCCAAGAAGATGCCCAGC
TGGTTCCGGGGGAAGGCCGTGGCGACTGTGGTGTTCATCCTGAACCGCTCGTACACACGCAACATTGACGGCAAGACCCC
CTACGAGGCATGGTACAACAATAAACCGGCGGTGCACTACCTACGCGTGTTCGGCGGCATTGCCTATGTCAAGAACACCC
GGCTAGGGCTCAAGAAGCTGGACGATCGCAACACCAAGATGATCTTCATCGGCTACGAGGAAGGGTCGAAGGCGTACAGG
GTCTATTATCCGCTGACTTAACGCATGTATGACACAAACGGCATGGTGTTCGACGAGGGCGTGAGCTAGGACTGGGGCGC
GTCGAGCGAGGCCCAGGACGAGCAACTTGTCTTCCCTGTTCAGCTCCCACTCGCCACCGGTGCAAACTCAGCACCAGCTG
AGACAACATCCCCGGAAGCAGGGCGGACGCCCGAAGGATCACCAGCGCGTGCGTCGCCCGCCACTCCTGATAGCACCGGA
GCACCTGCATCGCCAGACTCCGCGTGGCCAGATGCGACGGCCACACCCAGTAGCAGTGCGCCTCAGGGTGTAGACCCAGG
GGACGTGGAGTTTGTCACACCGCCAGCAACCATGCCTGACCTCTTCGATGCTGATGATGATCTGCCAGTACTCGACCTCG
CTTCCGCCGTATGGCAGATATCCTTGGCGGCCCAGCTAAGCAGCCGGCGGAGCGCTTGTTGCTGGCAGGGGAGGAGCCGG
CCAGTTTCCTCGAGGTTGAGCCCCATGAGTGCTGGCGAAGGGCAATGCTCGAAGAACTGGCGAGCATTGAGGAGAACGGA
ACCTGGGTGCTCACTGATCTTCCTCCAGGTCATCAGGCAATCGGGCTCAAATGGGTGTTGAAGTTGAAGAAAGATGCTAC
CGGTGCTGTTGTTAAGCACAAGGCGAGGCTGGTAGCAAGAGGTTTTGTGCAGAAGGACGGCATGGACTTCGATGATGTGT
TCGCGCCCGTGGCAAAACTGGACTCTGTCCGTGTCATGGTCGGCACGGCGGCGCAGCATGGCTGGGAACTGCATCACCTC
GACATCAAGTCAGCATTTCTGAATGATGAGCTCAAGGAGGAGGTGTACGTTGCCCAACCACCCGATTTTTCTCAGGAGGG
AGAAGAGCACAAGGTCTACCGTCTGCATAAAGGCGCTCTACGACTTGCGGCAGGCGCCGCGGGCGTGGAACGCAAAGCTC
GACGCCACTCTGAAGGAGCTGGGGTTCTCCTGTTGCCCAGCTAATCAGGCTCTGTACGCGCGTGGAAGAGGGCAAGCGCG
GCTCCTAGTCGGCGTGTATGTGGATGATCTCGTCGTCAACGGCGCCGACGGCGAGTGCGTCAGAAAGTTCAAGGCGGAGA
TGATGGCCAAGTTCTGCATGAGCGATCTCGGACTGCTCAGTTTCTACCTCGGCATCAAGATGAAGCAAGGGGGAGCGATA
ATTCTATCCCAGGCTGCATGCACCGGCAAGCTGCTGGAGCGAGTGGGCATGACGGACTGCAACCCAGTGCACGTTCCCAT
GGAGCTGCGGCTTCGTCTGAGCATGAAGGGACCAGAACCACTGGTGGATGCCAAGGACTGCCAGAGCATCATCGGAGGGC
TGCGGTATCTCACTCATACATGGCCGGACATCGTGTTCATGGTGGGGTATGTCAGTCGGTTCATGGAGGCACCGAACACG
GCGCACCTCACCGCTGTCAAACACATGCTGCGTTATATCGCAGGCACGCGCAGGCTTGGTTGCAGGTACACCAAGGGCAG
CGAGAGCATGCTCATTGGGTACCGTGAATCCAACATGGCTGGCAATGTCGATGATCGCAAGAGCACCTCGGGGAACCTCT
TCTTCCTTGGGGGTGCACCGCTCACCTGGCAGTCGCAGAAACAGAAGATTGTTGCTCTATCTTCGTGTGAGGCTGAGTAC
GTGGCGGCAACAATAGTAGCTTGTCAGGCCATTTGGCTGGGCAGGCTCATGGGCGATCTGCTGATGGAGGAGCACGGCGC
TGTCACCATCTTCACCGACAACAAGTCAGCCATATAGTTTTGCAAGAATCCGGTCTTCCATGATCAGAGCAAGCGCATCA
ACGTTCGCTTCCGTTTCATCCGGAGATGCATCAAGGAAGGGAAGATCAAGGACCAAGGTCCAGTACATCGCCACAGGTGA
CTAGCTCACTGACATGTTCACCAAATCACTCGGGCGCATGCGGTTCCAGGAGCTGCGCGCACGCATTGGCATGGTTGAAG
TTTGGTCTCTATGTCACGACTAGCTTAGGGGGAGATTGTTAGAAAATAAACTAGCGTGACGGGTTCAAGTTTAGATTAGA
CGTAGTGTTAGGATCCAGTTTTGTGAGTCTGCAGTTTCTTCGATGTTCAGTTTCAGTCAAGCCTGAGGACGCGGTATGTG
CGATCCCGAGGCCATAGCTCACGGCGAGCGCACGCCCATGATCATGGGATGGCATGATCTAGTAGATGGGGCACGCCTCG
ATCCGTATTTCCCGTTTGAATAAGAAGAGGAGGAGAAAAGCAGTAGAGTTTGCGCTGCACAAAATTCAGTCCCCTTCATG
TCCCTCTCTCCCTCGCCATTGACAGGAGCTTTGAGCTCAGAGATAACACTTTATGACGTCGCCTCCCTTGCGGGACCAGT
TCTCCGTGATCGACAAGGCGCCCGAAAACACAAGATCCACCCCTCCTCCGACAAT---TAGTACATGGACTATGCCGCAT
AATCACATGTGACGGGTTGCAGAAGTAATCTCAACTAGTATCTTTTCTCTTCAATGCACGCTTGTCGTAGTTTAGTTGTT
AGTAATGGTTCCTAGATCACCATTACTCCTACTAG-TTATACTCATCTCGGTCACACTCCCCCTTTCTCTCAACAATGTT
TGATGTATTACTCTTGATTGTTAATGACTTCATACCCATATGCAATTTTACTCGGGGCAATTCTTGTTCTACTAAATTTG
ATCCATATGTTTGTTTTGTGAAGGATCTAGACACCAAGGGAATCATCGGGAGATCTAGTTGTTAGAAAGATCTATATTCT
CTTTTCTCCATAAATAAAGGTGGCCCCTCGATCTGCTCCATCAACATGTGGCATCGGTAACTTGGACACCTAGGGCAAGC
TTCATTAGTGGCCATGGCAAAAAAAAGGTCTTCCTTCTTGTGATAAACCAATGCGGCCATAACATGTTTGTGGGTCTTGT
CAATTAGGGTGGCAACCTCGATTGCCTTTTCTTATTTGTCTTTACTATATCACCTTTCCAAAATACATTGTGATTTGTGG
ACCTTGCCAATTTATAGTTTCTCCAGTTTCCAGTACTACCCTATCACATTTTATATGATTGTTCTCATTATTTCTGAACA
TTTTCCCTTAGAAACAAATCAGGTACAACTAACAACTTGCAACATTTTCTATAACTGACAAGTGAGCCCTCGTTAGTAGG
TTAGCCGGATGATTTAATTAGGTAAG------------------------------------------------------
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>chr4A_3
--CAGTTACGATTAGCTTTTGCAATGATCAGAACGCCACGTCGGTGTGTGCGGGGCAGCCGTGCATAGCTGGCCTTTTGC
TACCGG------CGTTGCCGTGTACACTTGTGACCGACCGGCTTCGGCTTTCGGCGGGCCAGTTTGTGCGTGCATGCCGG
CCGCGCCGCATGCCTGTGCGGACGTGCACGCGATGGCTAAACTTTTTGGTTTGGAGTGGTAGGTGGTGACCACGAGACAA
AACTTGTTGGAACGAGGCACACGGATGGCTAATAC------------------------------AGTGTCGTGCAGTTC
TTACTGTGGGAAACTTATGCCGCACTGCACCACCACCCACCACCGATATTAGCCATTCATGCGACTGATTCCAACGAGTT
TTGTCCCGTGGCCACCATTCACCAACCCAAACCAAAAGTTTCAGCCATGGCGTGCACGTCCGCACAGGC-ATGCGGCGCG
GCATGCATGCATGCACAAACTGTTCCGCCGAAAGACGAAGCCG----GCCACGAGTGTACACGGCAAGGCACGCACCGGT
AACGAAAGACGAGCCACGGACGGCTGGCGCGCACGCACCGACGTGGCGATCTGATCACTGC-AAAGCTAATCGTAACTGA
AGAGGAAAGCCTCACTCTATCTCATCAGTTACCGTC--------------------------------------------
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-----------------------------------
>chr4D_3
--CAATTACGATTAGCTT-TGCAATGATCAGATCGCCATGTCAATGAGTGCGGGGCAGCCGTGCGTCGCTGGCCTTTTGC
TACCGG------CCTTGCCGTGTACACTTGTGA----CCGGCTTCGGCTTTCGGCGGGACAGTTTGTGCGTCCATGCCCG
CCGCGCCGCATGCCTGTGCGGACGTGCACGCGATGGCTAAATTTTTTGGTTTGGTGTGGTAGGTGGTGGCCACAGGACAA
AACTCGTTGGAATGAGGCACACGGATGGCTGGTAC------------------------------AGTGTCGTGCAGTTC
TTACTGCGGGAAACTTATGCCGCGCTGCACCACCACCCACCACCGATATTAGCCATCCGTGCGCCTGATTCCAACGAGTT
TTGTCCCGTGGCCACCATTCACCACCCCAAACCAAAAGTTTCAGCCATGGCGTGCACGTCCGCACAGGC-ATGCGGCGCG
GCAAGCATGCACGCACAAACTGTTCCGCCGAAAGCCGAAGGCG----GCCACAAGTGTACACGGCAAGGCACGCACCGGT
AGCAAAAGACGAGCCACGGACGGCTGGCTCGCACGAATCGACGTGGCGATCTGATCAGTGC-AT-GCTAATCGTAACTGA
AGAAGAAAACCCCACTCTATCTCATCAGTTATCGTC--------------------------------------------
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-----------------------------------
>chr4B_2008
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------------------------------------------------------------------------------CT
TTATGT--------------------------------------------------------------------------
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--------------------------------------------------------CGTTGCCTCCCTCACGGGACCGGT
TCTCCGTGATCGACATGGCGCTCGGCAACACAAGCTCCACCCATCCTCCGACAATGACTAGTACATGGACTATGCCGAGT
AATTGCATGTGACGGGTTGTAGAGGTAATCTCAACTAGTATCTTTTCTCTTCGATGCATGCTTGTCGTAGTTTAGTTGTT
AGTAATGGTTCCTGGATCACCATTACACCTACTAGTTTATACTCATCTCGGTCATACTCCCCCTTTATCTCAACAATGTT
TGATGTTTTACTCTTGATTGTTAATGACTTCATACCCATATGCAATTTTACTCAGGGCAATTCTTGTTCTACTGAATTTG
ATCCATATGTTTGTTTTGTGAAGGATCTAGCCACCAAGGGAATCATCGGGAGATCTAGTTGTTAGAAAGATCTATATTCT
CTTTTCTCCATAAATAAAGGTGGCCCCTCGATCTGCTCCATCAACATGTGGCATCGGCGACTTGGACACCTAGGGCAAGC
TTCGTTAGTGGCCATGGCATAAAAAA-GTCTTCCTTCTTGTGATAAGCCAATGCGGCCATCACATGTTTGTGAGTCTTGT
CAATTAGGGTGGCAACCTCGATTGCCTTTTCTTATTTGTCTTCACTATATCACCTTTCCAAAATACATTGTGATTTGTGG
ACTTTGCCAATTTATAGTTTCTCCAGTTTCCAGTACTACCCTATCACATTGTATATGACTGTTCTCATTATTCCTAAACA
TTTTCCCTGAGAAACAAATCTGGTACAACTAACAACTTGTGACGTTTTCCATAACTGACAAGTCAGCCTTGGTTAGTAGG
TTAGCCGGTTGATTTAATTAGGTAAGGCTAAGTTTAACCATCGTGGGTCCCAACAGTCATGTTTGACCTGCCCACGCCAG
CTTCGATTG-CCCCACTAGCACTACAAACTTTGCTCTATTTTGTGACGCTTCACTTGTGTCATCTATAACCCATTTTCAT
CATGGAAAATACTC----TAGCGATGTTTTTCGGTCCTCGTGCCCACCATCACCGAAGCGCCGTCATAGAAAATAAAATT
TTGACGGTACCACTTTTTTCATCACGCAAGTTGGCATATTAGGTGACAGAG-AAAAAATGTCACCAGTGATCGTGTTCAG
TGA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------
>SNPs
-----------------------S----------------------------S------------------------S-S
----------------------------------------------S------------------------------S--
--------------------------------------------------------------------------------
----------------S----S-S--------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------S-----------------------------------------
-------------------------------------------SSSS---------------------------------
--------------S-S-------------------------------S------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
-------SS-----------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S----------------S----S-S-----S----------------------------------S---------
---------------------------------------S--------------------------S-------------
----------------S---------------------------------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-----------S----------S--------S----S-------------------------------------------
---------------------------------------------------------S----------S-----------
---------SS--------------------------------------------------------------------S
----------------------------------------------------------------------S---------
----------------------------------------------S----------------------S---------S
--S--S-S-----------------------------------------------------S------------------
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-----------------------------------------------------------------SS-------------
---------------S----------------------------------------------------------------
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---S---------------------S------------------------------------------------------
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----------------------S----------------------------------------S----------------
-------S------------------------------------------------------------------------
----------------S-------------------------------------S-------------------------
--------------------------------------------------------------------------------
---S-------------------S----S-------------S-----------------------------------S-
----------------------------------------------------------------S------------S--
------S---------------------------------------------S------S--------------------
------------------S-------------------------S----------------------------S------
-----------S--SSSS------SS----------SS---S-----------S--------------------------
--------------------------------------------------SS--------------------S-----S-
----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_622
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------------------------------------------GTGGCGTTCTGATCATTGCA------------------
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-----------------------------------
>reverse_5746
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-----------------------------------------------------------------TTTCGCGGGACCAGT
TCTC----------------------------------------------------------------------------
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-----------------------------------
>forward_1749
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-------------------------------------------------CCCGTTCCATGTTGTTGCTG-----------
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-----------------------------------
>reverse_6988
--------------------------------------------------------------------------------
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---------------------------CACTCGACGGGTTCAAGACA---------------------------------
--------------------------------------------------------------------------------
-----------------------------------
