>input_sequence_52193
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---------------------------------------------------------------ATGCAGAGCACCGTCGT
GCTTTACACATGGATGGTCAGGGGCCACCTCCACCCCATGACACAGTTCGCCCACCATCTCGCCGCACATGGCGTTCCTG
TCACCGTCGCCGTCGCCGACGTCCCGTCTATAGGCAAGTCCTCTGAGACCATTGCCGGCCTCGCCGCATCCTATCCTTCC
GTCTCCTTCCACCTACTCCCGCCGTCGGCGACCCGTTCCGCCCAGACGGCTGACCCCGATGCCGATCCATTCATCGCCCT
TGTCGCCGACCTCCGCGCCACCAACTCTGCCCTCCTCGCCTTCCTGAGGCCCCTCCCGTCCCTCAAGGCTCTAGTCACCG
ACTTCTTCTGCGCCTACGGGTTTGATGCCGCCGCAGAGCTCGGCGTCCCGGCCTACCTTTTCTTCACCTCCGCTGCGTCG
GTCCTTGCTGCCTACCTGCACATCCCCGTCATGCGCTCCACTGTCTCCTTCCGGGACATGGGGCGCTCCCTGCTGCACTT
CCCCGGAGTCCACCCAATTCCGGCGTCTGACTTGCCGGAAGTGCTGCTCGACCGCGGCGACAGCCAGTACAAGACAATCC
TTAGCCTTATGGAGCAGCTGCCAAGATCTAAGGGCATTCTGTCGAACACGTTCGAGTGGCTGGAGCCCCGCGCCGTCAAG
GCGATAAAAGACGGGACTCCCTGTCCCGGCGAGTCAGTACCGAAACTGTTCTGCGTCGGTCCATTGGTCGGCGAGGAGAG
GGGAAGCGCCGTGAAGCACGAATGCCTGAGATGGCTAGACAAGCAGCCAGCGCGGAGCGTGGTATTCCTCTGCTTCGGGA
GCGCGAGCTCGGTGCCCGCAGAGCAGTTAAAGGAGATCGCCGTGGGACTGGAGAAGAGCGGGCACGCGTTCTTATGGGCC
GTGCGAGCGCCCGTTGCGCCGGACGCCGACGCGACGAAGCGGTTCGAGGGGCGGGCCGAGGCGGCGGTGGAGCCGCTGCT
GCCGGAGGGATTCTTGGACAGGACGAGGGGACGCGGGATGGTGGTTTCCTCCTGGGCGCCGCAAGTGGAGGTGCTCCGGC
ACCCGGCGACCGGCGCGTTCGTGACGCATTGCGGATGGAACTCGACGCTAGAGGGTGTTGTAGCCGGGGTGCCGATGCTG
TGCTGGCCCATGTACGCGGAGCAGAGGATGAACAAGGTGTTCGTCGTGGAGGAGATGAAACTCGGGGTGGCCATGAGCGG
CTACGACGAGGGGATAGTTAAAGCGGATGAGGTAGAGGGGAAGGTGAGACTGATCATGGAGTCCGAGCAAGGGGAGGAGA
TCAGGGAACGGATGACGATGGCACAAGTGATTGCTGCCAATGCGCTGGAAAGCGGTGGATCTTCGGCGGCAGCATTTGTT
GACTTCGTGGATAATCTGAAGATTTCGATATTCGATTGA-----------------------------------------
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>chr3A_1_TraesCS3A01G279600
TTTTTCAAAGATATGTCAAAGCTTGACGTATCTAAATCAAAGATTGAGAGAGCCTAGAAAGGCATATATCTTTACAACTT
ATCCACGACTATCATAGCCAATCCTCGACATACGGATTACTCATTACTAGCCCACCCATCTAGTCTATCCGGAAGCGGCC
TCTCTTCCCGCAACAACTCAGTCGCCCTCCTGTCTTGCCCTTCTAAGTCGATCCTCTTGAGAAGCTCACTTGTAGAAGGG
ATCACTCCGTTGAACACCACATCGTTCGTGTGTCTCCAAAGCAACCGTGCAACGAGAGCGATTACTGTCCATGTCTCCCT
TCTAAGCTTTGGTTGTGGATTTATAAAGGTATACCATTCCAGCATATTGGCGTCTGCAGTAGATAGTCAAGCTAGCTTAT
CCCAGTAATCAACTTCGGAGAACCACACTTGTCTAGCGAACACACATCAAGAAAGATGT-GGCTGATCGTCTCAGGGGCT
TGGTCACAGAAGGGGCAGGCCGTCGGGTGTGGTAGTTGTCGGTGCGCAAGCCTGTCGTTTCGTCATGTGCTCATGGGTGT
CCAAGCAGTTGCAAAGTCCAAACTTCATTCTACGTGATTCTATTTTTCCGAGCTTGACGTGATTCACGACGGCATAAAAT
AACCATGAATAAGATCGGGTACATCTCCATTCTCGAAGCATATTTTTTGGGAAAAATCTTACTTGGCTGACGCATGCTGG
GAAAGCATGGCATTTCATACGTTTTTTCCAGCAGTTTTAGTCATATAAATATGCTAACTTGGCAGCTGAAACCATTGCTG
GCGTTAATAGTTGCATGCGAAACCAAACTAAATCAAACAACGTATCAA--------------------------------
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------------------------------------------------------------CCTACCATGACCACAC----
----ACTCAAATATGCCTAACTTTACAGCTGGTAGTCGCAGGCGGCTACGAAACATCGCCAGTACA--TATAACACAACC
GATCAATTGCCAGCTTCCCTCCTTCAGAGTTCAGAACACTGCCACTGAAACACAGAAGCAAATATGCAGAGCACCGTCGT
GCTTTACACATGGATGGTCAGGGGCCACCTCCACCCCATGACACAGTTCGCCCACCATCTCGCCGCACATGGCGTTCCTG
TCACCGTCGCCGTCGCCGACGTCCCGTCTATAGGCAAGTCCTCTGAGACCATTGCCGGCCTCGCCGCATCCTATCCTTCC
GTCTCCTTCCACCTACTCCCGCCGTCGGCGACCCGTTCCGCCCAGACGGCTGACCCCGATGCCGATCCATTCATCGCCCT
TGTCGCCGACCTCCGCGCCACCAACTCTGCCCTCCTCGCCTTCCTGAGGCCCCTCCCGTCCCTCAAGGCTCTAGTCACCG
ACTTCTTCTGCGCCTACGGGTTTGATGCCGCCGCAGAGCTCGGCGTCCCGGCCTACCTTTTCTTCACCTCCGCTGCGTCG
GTCCTTGCTGCCTACCTGCACATCCCCGTCATGCGCTCCACTGTCTCCTTCCGGGACATGGGGCGCTCCCTGCTGCACTT
CCCCGGAGTCCACCCAATTCCGGCGTCTGACTTGCCGGAAGTGCTGCTCGACCGCGGCGACAGCCAGTACAAGACAATCC
TTAGCCTTATGGAGCAGCTGCCAAGATCTAAGGGCATTCTGTCGAACACGTTCGAGTGGCTGGAGCCCCGCGCCGTCAAG
GCGATAAAAGACGGGACTCCCTGTCCCGGCGAGTCAGTACCGAAACTGTTCTGCGTCGGTCCATTGGTCGGCGAGGAGAG
GGGAAGCGCCGTGAAGCACGAATGCCTGAGATGGCTAGACAAGCAGCCAGCGCGGAGCGTGGTATTCCTCTGCTTCGGGA
GCGCGAGCTCGGTGCCCGCAGAGCAGTTAAAGGAGATCGCCGTGGGACTGGAGAAGAGCGGGCACGCGTTCTTATGGGCC
GTGCGAGCGCCCGTTGCGCCGGACGCCGACGCGACGAAGCGGTTCGAGGGGCGGGCCGAGGCGGCGGTGGAGCCGCTGCT
GCCGGAGGGATTCTTGGACAGGACGAGGGGACGCGGGATGGTGGTTTCCTCCTGGGCGCCGCAAGTGGAGGTGCTCCGGC
ACCCGGCGACCGGCGCGTTCGTGACGCATTGCGGATGGAACTCGACGCTAGAGGGTGTTGTAGCCGGGGTGCCGATGCTG
TGCTGGCCCATGTACGCGGAGCAGAGGATGAACAAGGTGTTCGTCGTGGAGGAGATGAAACTCGGGGTGGCCATGAGCGG
CTACGACGAGGGGATAGTTAAAGCGGATGAGGTAGAGGGGAAGGTGAGACTGATCATGGAGTCCGAGCAAGGGGAGGAGA
TCAGGGAACGGATGACGATGGCACAAGTGATTGCTGCCAATGCGCTGGAAAGCGGTGGATCTTCGGCGGCAGCATTTGTT
GACTTCGTGGATAATCTGAAGATTTCGATATTCGATTGAATCGTTGACTCTGT---------------------------
----------------------------AGTGGAATTTTCAAACTGAGCAACACCACTTAATCAGTATGGACAAAATGAA
GTGGCAATCAGCTAATGGTGTCCCTTTTTTTTA--AACACACAAACTATGTGTCTTTTGTACTGCCTGCATCCAA-AAAA
GATTGTCTTAAATTTATCTAAATACGGATGCATCTAACACTACAAGCTATTTTGGGTGGAGGTAATGTGAAGATACAGGA
GAAAACAAGTTGCAAGGGGGTGCGACGGTTTCTTGGTCTGGTCCAGGGTTTAGGATTTAAGGTTTGCACCCAGATCTGCG
CGGCGGCGGCGATGGGTGCAGCGAGT-TGGTCTTTGCTTTGCACTATGATCCATATAACAAAG--AAAAAATCGATGATC
AAAATGAGTGAA-TACTAAGTCATAGATGGTATTTATCATTCAAGAGACTCTCAACAAGTTTTACAGGACATATTCACAA
AC-AAAAAACCGATGGCCAAGTGGTGTAGGACTCCGTGAGCTCGTAAGTTTTGCTTCATGTTGCTCTATCTGTTGATAAT
GTGATTGTTATGCTCTATGTTGCACTATTTTGATC-TATGATTTTATCACTTTGCTAACTCGGCCTTGGAGGCTTTGTAC
AACAAGAACGAGGACAAGCCATTCATGAGGCTTCATTGTTGGAGCAAGTTGACGCTTGACCCCAGCGTCGCTTAGGCGAG
CGACTCGGGGGAACCTAGTGATGACCCACAAGTATAGCGGATCTATCGTAGTCTTTTCGATAAGTAAGAGTGTCAAACCC
AACGAGGAGCAGAAGAAAATGATACGCGGTTTTCAGCAAGGTATTCTCTGCAAGCACTGAAATTATAGGTAACAGATAGT
TTTGTGATAAGATAATTGGTAACGAGCAACAAGTAACAAAAGTAAATAAAGTGCAGCAAGGTGGCCCAATCCTTTTTGTA
GCAAAGGACAAGACTGGACAAATTCTAATATGGAGAAAAGCGCTCCCGAGGACACATGGGAAT
>chr7A_1
TTTTTCAAGGATACGTCAAAGGTTGACATATCAGGTTCAAAGATCAAGAGAGCCTAGAAAGGCATATAATTTTACAACTT
ATCCACGGCTATCATAGCCAATCCTCGACATGCGGATTACTCACTACTAGCCCACCCATCTAGACTATCTGGAAGTGACC
TCTCTTCACGCAACAGCCCAGCGGCCCTCCAGTCTTGCCCTTCTAAGCCGATCCTCCTAAGAAGCTCACTTGTGGAAGGG
ATCCTTCCGTTGAACATCATATCGTTTATGTGCTTCCATAACAGCCATGCAACTAGCGCGATTACAGTCCATGTCTCCTT
CCTAAGCTTTGGTTTTGGATTTATAGAGGTCCACCATTCTACCAAGTTGGCGTCTGCAGTAGGTAGCCAAGCTAGCTTAT
CCCAGTGGTCAAGGATGGAGAACCACACTTGTCTAGCGAACACACATCCAAGAAGGATGCGGTTGATCGTCTCAGGGGCT
TGATCACAGAAGGGGCAGGCTGTCGGGTGTGGTATGTGTTGGTGCGCAAGCCTATCGGTCGTC-----------------
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>chr3B_762
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------------------------------------------ATATAAATATGCTAACTTTTCAGCTGAAACCATTGCCG
GCATTAATAGTTGCATGCGAGACCAAACTAAATCAAACAACGTATCAACCTATCGGATCCAGATCCTCTAACATAGGATG
GGAAGTCAGATAAGCTACAGTAGCCTGACTTTCCTTCACTAGATTCCTGTAATTTGCAGCCTAACACAATGATTTAAGAA
CAGTGATTACCTACAGTAATACGCGAACAACAGTAGTTTTTAAACCGTGCTCGTTCTCTGACTTCCTTTCACCATTTTAC
ACAAGATGATGCTGTAGCTCTTTAACTTGCCTTGTGCAAGTTAGAGGATCTGGTTCCCAACCTACCATGACCGCAGAGGC
GCAGACTCAAATATGCCTAACTTTACAGCTGGTAGTCGCAGGCGGCTACGAAACATCGCCAGTACATGTATAACACAACC
GATCGATTGCCAGCTTCCCTCCTTCAGAGTTCAGAACACTGCCACTGAAACACAGAAGCAAATATGCAGAGCACCGTTGT
GCTTTACACATGGATGGTGAGGGGCCACCTCCACCCCATGACACAGTTCGCCCACCATCTCGCCGCACATGGCGTTCCTG
TCACCGTCGCCGTCGCCGACGTCCCGTCTACAGGCAAGTCCTCTGAGACCATTGCCGGCCTCGCCGCATCCTATCCTTCC
GTCTCCTTCCACCTACTCCCGCCGTCAGCGACCCGTTCCGCCCAGACGGCTGACCCCGATGCCGATCCATTCATCGCCCT
TGTCGCCGACCTCCGCGCCACCAACTCTGCCCTCCTCGCCTTCCTGAGGTCCCTCCCCTCCATCAAGGCTCTAATCACCG
ACTTCTTCTGCGCCTACGGGTTTGATGCCGCCGCAGAGCTCCGCGTCCCGGCCTACCTTTTCTTCACCTCCGCTGCGTCG
GTCCTTGCTGCCTACCTGCACATCCCCGTCATGCGCTCCACTCTCTCCTTCCGGGACATGGGGCGCAACCTGCTGCACTT
CCCCGGAGTCCACCCAATTCCGGCGTCCGACTTGCCGGAAGTGCTGCTCGACCGCGGCGACAGCCAGTACAAGGCAATCC
TTAGCCTTATGGAGCAGCTGCCAAGATCTAAGGGCATTCTGTCTAACACGTTCGAGTGGTTGGAGTCCCGCGCCGTTAAG
GCGATAAAAGACGGGACTCCCCGTCCCGGCGAGTCAGTACCGGCATTGTACTGCGTCGGTCCATCGGTCGGCGAGGAGAG
GGGAAGCACCGTGAAGCACGAATGCCTAAGATGGCTAGACAAGCAGCCAGCGCGGAGCGTGGTATTCCTCTGCTTCGGGA
GCGCGAGCTCGGTGCCCGCAGAGCAGTTAAAGGAGATCGCCGTGGGACTGGAGAAGAGCGGGCACGCGTTCTTATGGGCC
GTGCGAGCACCCGTTGCACCGGACGCCGACGCGACGAAGCGGTTCGAGAGGCGGGCCGAGGCGGCGGTGGAGCCGCTGCT
GCCGGAGGGATTCTTGAACAGGACGAGGGGACGCGGGATGGTGGTTTCTTCCTGGGCGCCGCAAGTGGAGGTGCTCCGGC
ACCCGGCGACCGGCGCGTTCGTGACGCATTGCGGATGGAACTCTACGCTAGAGGCTGTTGTAGCCGGGGTGCCGATGCTG
TGCTGGCCGATGTACGCAGAGCAGAGGATGAACAAGGTGCTCGTCGTGGAGGAGATGAAACTCGGGGTGGCCATGAGCGG
CTACGACGAGGGGATAGTTAAAGCGGATGAGGTAGAGGGGAAGGTGAAACTGATCATGGAGTCCGAGCAAGGGGAGGAGA
TCAGGGAGCGGATGACGATGGCGCAAGAGATTGCTGCCAATGCGCTGGAAAGCGGTGGATCTTCGGCGGCAGCATTTGTT
GACTTCCTGGATAATCTGAAGATTTCGATGCTCGATTGAATCGTTGACTATGCCTTTTTAGCCTTCTTCGTGTAATCGTG
TTCACCTTGTCCAACATGTGTACTCTGGAGTGGAATTTTCAAAGTGAGCAACACCACTTAATCAGTATGCACAAAATGAA
GTAGCAATCAGCTAATGGTGTCCCTTTTTTTCAAGAACACACAAGCTATATGTCTTTTGTACTCCCTCTATCCAAAAAAA
AATTATCTTAGATTTGTCTAAATACGGATGCATCTATCAGTACAAACTA-TTTGGGAAGGAGTAATGTGAAGATACGGGG
C----------------------------TTCGTGGCCTG--------------------------------GATCTGCG
TGGCGGCTGCGACGAGTGCAGCAAGGATGGTCTTCGCTTTGCACTATGATCCATATAACAAAGAAAAAAAATCGATGATC
AAAATGAGTGAAATACTAAGTCATAGATGGCACG--TCATTCAAGAGACCATCAACAAGTTTTGCAGGGCATATGTACAA
AT-GCAAAAGCGGTGGCCAAGTGGTGTAGGACTCCATGAGCTCGTAAGTTTTGCTTAATGTTGCTCTATCTGTTGGTAAT
GTGATTGTTCTGCTCTATGTTGCAATGTTTTGGTCATATGATTTTGTTGCTTTGCTAGCTCGGCCTCAGAGGCTTTGTAC
AACAAGAACAAATATAAGTCATTCATGAGGATTCATTGTTGGAGAAAGTTGATGCTCGCCCCC-----------------
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>chr3D_762
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------------------------------------------ATATAAATATGCTAACTTTACAGCTGAAACCATTGCCA
GCATTACTGGTTGCATGCGAAACCAAACTAAATCAAACAACGTATCAAT-------------------------------
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-------------------------------------------------------------CTACCATGACCGCAGA---
-----CTCAAATAT-------------GCTGGTAGTCGCAGGCGGCTACGAAACATCGCCCGTATA--TATAACACACCC
GATCGATTGCCAGCTTCTCTCCTTCAGAGTTCAGAACACTGCCACTGAAACACAGAAGCAAATATGCAGAGCACCGTCGT
GCTTTACACATGGATGGTCAGGGGCCACCTCCATCCCATGACACAGTTCGCCCACCATCTCACCGCACATGGCGTTCCTG
TCACCGTCGCCGTCGCCGACGTCCCGTCTACAGGCAAGTCCTCTGAGACCATTGCCGGCCTCGCCGCATCCTATCCTTCC
GTCTCCTTCCACCTACTACCGCCGTCAGCGACCCGTTCCGCCCAGACGGCTGACCCCGATGCCGATCCATTCATCGCCCT
TGTCGCTGACCTCCGCGCCACCAACTCCGCCCTCCTCGCCTTCCTGAGGTCCCTCCCGTCCGTCAAGGCTCTAGTCACCG
ACTTCTTCTGCGCCTACGGGTTTGATGCCGCCGCAGAGCTCGGCGTCCCGGCCTACCTTTTCTTCACCTCCGCTGCGTCG
GTCCTTGCTGCCTACCTGCACATCAACGTCATGCGCTCCACTGTCTCCTTCCGGGACATGGGGCGCTCCCTGCTGCACTT
CCCCGGAGTCCACCCAATTCCGGCGTCCGACTTGCCGGAAGTGCTGCTCGACCGCGGCGACAGCCAGTACAAGACAATCC
TTAGCCTTATGGAGCAGGTGCCAAGATCTAAGGGCATTCTGTCGAACACGTTCAAGTGGCTGGAGCCCCGCGCCGTCAAG
GCGATAAAAGACGGGACTCCCCGTCCCGGCGAGTCAGTACCGAAACTGTTCTGCGTCGGTCCATTGGTCGGCGAGGAGCG
GGGAAGCACCGTGAAGCACGAATGCCTGAGATGGCTAGACAAGCAGCCAGCGCGGAGCGTGGTATTCCTCTGCTTCGGGA
GCGCGAGCTCGGTGCCCGCAGAGCAGTTAAAGGAGATCGCCGTGGGACTGGAGAAGAGCGGGCACGCCTTCTTATGGGCC
GTGCGAGCACCCGTTGCGCCGGACGCCGACGCAACGAAGCGGTTCGAGGGACGGGCCGAGGCGGCGGTGGAGCCGCTGCT
GCCGGAGGGATTCTTGGACAGGACGAGGGGACGCGGGATGGTGGTTTCTTCCTGGGCGCCGCAAGTGGAGGTGCTCCGGC
ACCCGGCGACCGGCGCGTTCGTGACGCACTGCGGATGGAACTCGACGCTTGAGGCTGTTGTCGCCGGGGTGCCGATGCTG
TGCTGGCCCATGTACGCGGAGCAGGGGATGAACAAGGTGTTGGTGGTGGAGGACATGAAGCTTGGGGTGGCCATGGACGG
CTACGACGAGGCGACCGTGAAATCTAGGGAGGTAGAGGCGAAAGTGAGGCTGGTCATGGAGTCCGAGCATGGGAAGCAGA
TCAGGGAGAGGATGGCGATAGCGAAAGTGATTGCAGCCGATGCGCTGGAGACCGGTGGGTCCTCAGCGGCAGCATTTGTT
GACTTCCTGGATGATCTCAAGATTTCCAT---------------------------------------------------
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>chr3A_1007
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---------------------------------------------------------------------AGCACCGTCGT
GCTCTACACATGGATGGTCAGGGGTCACCTCCACCCCATGACGCAGCTCGCGAATCACCTCGCCGGACATGGCGCTCCCG
TCACCGTCGCCGTCGCCGATGTTCCGTCCACAGGTGACTCCTCACAAACTATTGCCCGCCTCTCTGCCTCCTACCCTGCT
GTATGCTTCCACCTGCTCCCGCCGGCAACAACCCGCTCCGAGGACGCGGCCGATCCCAACGCCGACCCTTTCATCACCCT
CATCGCCGACATCCGCGCCACCAACGCCGCCCTCCTCGCCTTTCTGAGGTCTCTCCCGTCTGTGAAGGCTCTCATCACCG
ACTTTTTCTGCGCGTACGGGCTTGACGCAGCCGCAGAGCTCGGTGTCCCAGCCTACGTGTTCTTCACCCTTTGCGTGTCG
GCTCTTGCCACCTTCCTGCATATCCCCGTCATGCGCTCCGCCGTCTCCTTCGGGGAGATGGGGCGCTCCTTGCTGCACTT
CCCTGGAGTTCACCCAATTCCGGCGTCCGACTTGCCGGAGGTCCTGCTCGATCGTGACAACAGGCAGTACAGTACCACTC
TTGGTCTCTTCAAGCAGCTTCCCAGAGCGAAGGGCATTCTGTCGAACACGTTCGAGTGGCTGGAGCCCCGCGCCGTGAAG
GCGATAAAGGAGGGAATTCCCCGCCCCGGCGAGTCACTGCCGAAACTGTTCTGCGTCGGCCCATTGGTCGGCGAGGAGAG
AGGGAGCAACGCGAATCACGAATGCCTTGTGTGGCTGGACAAGCAGCCGGCGGGGAGCGTGGTGTTCGTCTGCTTCGGGA
GCGCGAGCTCGGTGCCGGCGGAGCAGCTAAATGAGATAGCCGTGGGGCTGGAGAAGAGCGGTCACGCGTTCCTCTGGGCC
GTGCGCGCGCCTGTCGCGCCGGAAGCCGACTCGACGAAGCGGTTCGAGGGGCGGGGTGACGCGGCGGTGGATGCGCTGCT
GCCGGATGGATTCTTGGACAGAACACGGGGACGCGGAATGGTGCTGTCGTCCTGGGCGCCGCAGGTGGAGGTGCTCCGGC
ACCCGGCGACTGGAGCGTTTGTGACGCACTGCGGGTGGAACTCCACGCTGGAGGCGGTCATGGCGGGGGTGCCGATGCTG
TGCTGGCCGATGTACGCGGAGCAGAGGATGAACAAGGTGTTCGTCGTGGAGGAGATGAAACTTGGGGTGGCCTTGAACGG
CTACGACGAGGCGATGGTGAAAGCGGAGGAGGTAGAGGCGAAGGTGAGACTGGTCATGGAGTCCGAGCAAGGGAACGAGA
TCAGGCAGAGGATGACGAAGGCGCAAGAGATTGCTGCCAATGCACTGGAGATCGGTGGATCCTCGGCGGCAGCAATCATT
GACTTGCTGGATAGTCTGAAGATTTCGACAAACGACTGAATCGTT-----------------------------------
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>chr3B_1007
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---------------------------------------------------------------------AGCACCGTCGT
GCTCTACACATGGATGGTCAGGGGTCACCTCCACCCCATGACGCAGCTCGCGAATCACCTCGCCGGACATGGCGTTCCCG
TCACCGTCGCCGTCGCCGATGTTCCGTCCACAGGTGACTCCTCACAAACCATTGCCCGCCTCTCTGCCTCCTACCCTGCT
GTATCCTTCCACCTGCTCCCGCCGGCAACAACCCGCTCCGAGGACGCGGCCGATCCCAACGCCGACCCTTTTATCACCCT
CATCGCCGACATCCGCGCCACCAACGCCGCTCTCCTGGCCTTTCTGAGATCTCTCCCGTCTGTGAAGGCTCTCATCACCG
ACTTTTTCTGCGCGTACGGGCTTGACGCAGCCGCGGAGCTCGGCGTCCCAGCCTACGTGTTCTTCACCCTTTGCGTGTCG
GCTCTTGCCACCTTCCTGCATATCCCCGTCATGCGCTCCGCCGTCTCCTTCGGGGAGATGGGGCGCTCCTTGCTGCACTT
CCCTGGAGTTCATCCAATTCCGGCGTCCGACTTGCCGGAGGTCCTGCTCGATCGTGACAACAGGCAGTACAGTACCACTC
TTGGTCTCTTCAAGCAGCTTCCCAGAGCGAAGGGCATTTTGTCGAACACGTTCGAGTGGCTGGAGCCCCGCGCCGTGAAG
GCGATAAAGGAGGGAATTCCCCGCCCGGACGAGTCACTGCCGAAACTGTTCTGCGTCGGTCCACTGGTCGGCGAGGAGAG
AGGGAGCAACGCGAATCACGAATGCCTAGTGTGGCTGGACAAGCAGCAGGCGGGGAGCGTGGTCTTCGTCTGCTTCGGGA
GCGCGAGCTCGGTGCCGGCGGAGCAGCTAAATGAGATAGCCGTGGGGCTGGAGAAGAGCGGTCACGCGTTCCTCTGGGCC
GTGCGCGCGCCTGTCTCGCCGGATGCCGACTCGACGAAGCGGTTCGAGGGGCGGGATGAGGCGGCGGTGGATGCGCTGCT
GCCGGATGGATTCTTGGACAGAACACGGGGACGCGGAATGGTGTTGTCCTCCTGGGCGCCGCAGGTGGAGGTGCTCCGGC
ACCCGGCGACTGGAGCGTTTGTGACGCACTGCGGGTGGAACTCCACGCTTGAGGCGGTCATGGCGGGGGTGCCGATGCTG
TGTTGGCCGATGTACGCGGAGCAGAGGATGAACAAGGTGTTCGTCGTGGAGGAGATGAAACTTGGAGTGGCCATGGACGG
CTACGACGAGGCGATGGTGAAAGCGGAGGAGGTAGAGGCGAAGGTGAGACTGATCATGGAGTCCGAGCAAGGGGACGAGA
TCAGGCACAGGATGACGAAGGCGCGAGAGATTGCTGCCAATGCACTGGAGATCGGTGGATCCTCGGCGGCAGCAATCATT
GACTTGCTGGATAATCTGAAGATTTCGACAAACGACTGAATCGTT-----------------------------------
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>chr3D_1007
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---------------------------------------------------------------------AGCACCGTCGT
GCTGTACACATGGATGGTGAGGGGTCACCTCCACCCCATGACGCAGCTCGCGAATCACCTCGCCGGGCATGGCGTTCCCG
TCACCGTCGTCGTCGCCGATGTTCCGTCCACAGGTGACTCCCCACAAACCATTGCCCGCCTCTCTGCCTCCTACCCTGCT
GTATCCTTCCACCTGCTCCCGCCGGCAACAACTCGCTCTGAGGACGCGGCCGATCCCAACGCCGACCCTTTCATCACCCT
CATCGCCGACATCCGCGCCACCAACGCTGCTCTCCTCGCCTTTCTGAGATCTCTCCCGTCTGTGAAGGCTCTCATCACCG
ACTTTTTCTGCGCGTACGGGCTTGACGCAGCCGCGGAGCTCGGCGTCCCAGCCTACGTGTTCTTCACCCTTTGCGTGTCG
GCTCTTGCCACCTTCCTGCATATCCCCGTCATGCGCTCCGCCGTCTCCTTCGGGGAGATGGGTCGCTCCTTGCTGCACTT
CCCTGGAGTTCACCCAATTCCGGCGTCCGACTTGCCGGAGGTCCTGCTCGATCGTGACAACAGGCAGTACAGTACCACTC
TTGGTCTCTTCAAGCAGCTTCCCAGAGCGAAGGGCATTTTGTCGAACACGTTCGAGTGGCTGGAGCCCCGCGCCGTGAAG
GCGATAAAGGAGGGAATTCCCCGCCCCGGCGAGTCACTGCCGAAACTGTTCTGCGTCGGTCCATTGGTCGGCGAGGAGAG
AGGGAGCAACGCGGATCACGACTGCCTAGTGTGGCTGGACAAGCAGCCGGCGGGGAGCGTGGTCTTCGTCTGCTTCGGGA
GCGCGAGCTCGGTGCCGGCGGAGCAGCTAAATGAGATAGCCGTGGGGCTGGAGAAGAGCGATCACGCGTTCCTCTGGGCC
GTGCGCGCGCCTGTCGCGCCGGATGCCGACTCGACGAAGCGGTTCGAGGGGCGGGGTGAGGCGGCGGTGGATGCGCTGCT
GCCGGATGGATTCTTGGACAGAACACGGGGGCGCGGAATGGTGCTGTCGTCCTGGGCGCCGCAGGTGGAGGTGCTCCGGC
ACCCGGCGACTGGAGCGTTTGTGACGCACTGCGGGTGGAACTCCACGCTGGAGGCGGTCATGGCGGGGGTGCCGATGCTG
TGCTGGCCGATGTACGCGGAGCAGAGGATGAACAAGGTGTTCGTCGTGGAGGAGATGAAACTTGGGGTGGCCATGAACGG
CTACGACGAGGCGATGGTGAAAGCGGAGGAGGTAGAGGCCAAGGTGAGACTGGTCATGGAGTCCGAGCAAGGGAACGAGA
TCAGGCAGAGGATGACGAAGGCGCGAGAGATTGCTGCCAATGCACTGGAGATCGGTGGATCCTCGGTGGCAGCAATCGTT
GACTTGCTGGATAATCTGAAGATTTCGACAAACGACTGAATCGTT-----------------------------------
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>chr3A_1554
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--------------------------------------------------------GCGACAGCCAGCACAAGGCAATCC
TTAGCCTTATGGAGCAGCTGCCAAGATCTAAGGGCATTCTCTCGAACACGTTCGAGTGGCTGGAGCCCCGCGCCGTCAAG
GCGATAAAAGACGGGACTCCCCATCCCGGCGAGTCAGTACCGAAACTGTTCGGCATCGGTCAATTGGTCGGCGAGGAGAG
GGGAAGCACCGTGAAGCATGAATGCCTGAGATGGCTAGACAAGCAGCCAGCGCGGAGCGTGGTATTCCTCTGCTTCGGGA
GCGTGAGCTCGGAGCCCGCAGAGCAGTTAAAGGAGATCGTCGTGGGACTGGAGAAGAGCGGGCACGCGTTCTTATGGGCC
GTGCGAGCGCCCGTTGCGCCGAACACCGACGCGACAAAGCGGTTTGAGGGGCGAGCCGAGGCGGCGGTGGAGCCGCTGCT
GCCGGAGGGATTCTTGGATAGGACAAGGGGACGCGAGATGGTGGTTTCCTCCTGGGCGCCGCAAGTGGAGGTGCTCCGGC
ACCCGGCGACCGGCGCGTTCGTGACGCATTGCGGTTGGAACTCGACACTAGAGGCTGTTGTAGCCGGGGTGCCGATGCTG
TGCTGGCCCATGTACGCGGAGCAGAGGATGAACAAGGTGTTCGTCGTGGAGGAGATGAAACTCGGGGTGGCCATGAGCGG
CTATGACGAGGGGATAGTTAAAGCGGATGAGGTAGAGGGGAAGGTGAGACTGATCATGTATTCCGAGCAAGGGGAGGAGA
TCAGGGAACAGATGACGATGGCACAAGAGATTGCTGCCAATGCGCTGGAAAGCGGTGGATCGTCGG--------------
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>chr3A_2601
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-----------------------------------------ACAAGCTATTTCGGGTGGAGGTAATGTGAAGATACATGA
GAAAACAAGTTGCAAGGGGGTGCGACAGTTTCTTGGCCTGGTCCAGGGTTTAGGATTTAAGGTTTGCACCCAGATCTGCG
CGGCGGCGGTGATGGGTGCAGCGAGT-TGGTGTTCACTTTGCACCATGATCCATATAACAAAG--AAAAAATCGATGATC
AAAATGAGTGAA-TACTAAGTCATATATGGTATTTATCATTCAAGAGACTGTCAACAAGTTTTGCAGGACATATACACAA
ACAAAAAAACCGGTGGCCAAGTGGTGTAGGATTCCGTGAGCTCATAAGTTTTGCTTCATGTTGCTCTATCTGTTGATAAT
GTGATTGTTATGCTCTATGTTGCACCATTTTGATC-TATGATTTTATCGCTTTGCTAACTCGGCCTTAGAGGCTTTGTAC
AACAAGAACGAGGACAAGCCATTCATGAGGCTTCATTGTTGGAGTAAGTAAACGCTCGACCCCAGCGTCGCTTAGGCGAG
CTACTCGGGGGAACCTAGTG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>SNPs
--------S----S-------S-----S----SSSS--------SS----------------------SS----------
-------S-----------------------S-----------S-------------------S-----S-----S-S--
-------S-------S-S---SS-------S----------------S--------S-S--------------S------
---SS-----------S--S------SS----SS----S-S--S--S------S--S--------S------------S-
S-------------S----------S----SS-------S-S--SS----------------S---S-------------
------SS----SSSS--------------------------------S-SS---SSSS---S-----------------
--S-----------------S-------------SS---S-------------S---S-SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------SS----------------S-
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S--S----
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------S-----------------------------------------------------
-------------------------------------------------S-----------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-----------------------S------------------S--S---------------------------
-------------------------------------------S-------------------------S----------
--S----------------------------S------------S----S-------------S---SS-----------
S---S-----S----S--------------------S--S----------------------------------------
--------------------------S---------S-------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------S------------S----------S-----
------------S-------------------------------------------------------------------
------------------------------------------------S------------------S------------
--------------------------------------------S-----------S-----------------------
-S------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_548
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------AGCCTGTCGTTTCGTCATGT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>reverse_1788
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TGACTTGCCGGAAGTGCTG----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>forward_717
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CTTACTTGGCTGACGCATGC---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>reverse_2987
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GGTTTCTTGGTCTGGTCCAGG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
