>input_sequence_52164
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------AGCCCACTAGTTGAACTGCACCGCACCACTCCCGAACTCATC
AGATACCCTCCTCCTCACTCATCGTCGGCCTATCGTCCGTCCTAGAGAGAGAGGGA--GAGGGAAGGGGTGAAAAAGGTG
TGAGCAGATTGTTGATAGATAGAGGGG--------GGGAGAGAGAGAAAAGAGGGGGATATCGCAGCAGCAGCCGCAGCA
GCGGGCAGAAAGAAAGACCCAAACGAGTGAGAGAGAGCGCC-------ACGAAAGCTTAGAAGAAGAGAGATCCACCTCG
AAGTAACCCCCCTCCCTCCCTCCCCATCCTCTCCTTCCTCCCCACGCC-------------------CTCCTCCCAGCGC
GAGAGCACGCCGCTGCTGCCAGCGGACGACT-------------GCGGCCAAGGCGGCGAATTGCTCTGCTCCGCTCCGC
TCCGGGCCGGGCCGCGAGGATGAGGGAGGAGGAGGAGCCCAGCTGGTTCGCGCGCTTCGACGAGGACCTGCCGGCGCCCG
ACGAGCTCATGCCGCTCTCGCAGTCGCTCATCACCCGCGATCTCGCCGCCGCCTTCGACATCCCCACCACGCACGGCGGG
GGCGGCCCGCTCAGCGGCGGCGCCGACGGGGCCGGCGGCGCGGGCGGCCAGGAGATGAACGGCGGCGCGTCCTCGGCCGC
CGGCTCCAGCGGCGGCAACGGGGGCGGCAACGGCGAGGAGCCGGCCAGGACCCTCAAGCGGCCGCGCCTCGTGTGGACGC
CGCAGCTGCACAAGCGCTTCGTTGATGCCGTGGCGCACCTCGGCATCAAGAACGCCGTGCCCAAGACCATAATGCAGCTG
ATGAGCGTGGACGGCCTCACGCGCGAGAACGTCGCGTCCCACCTCCAGAAGTACCGCCTCTACCTCAAGCGCATGCAGGG
GCTCGGCAACGGCGGTG---GCGGCGGGGGAGGCAGCCACTCCTCCGGCTCCGGGACCGACGCAGCCACCGAGCACCTCT
TCGCCACCGGGCCCTCCCCGTTCCTCCCGCCCGGCCGCGGCCCGGCCGTCGCCGACCCCTACACCCCCTACGCCGCCATG
CCGTCCCACCCCGCGGCGCACCACCATCACCACCACCCGCAGCAGATCGGCCACTTCCACCACCCCGCCGCGCGCCCGTT
CGGCCACTACGGCGCCGGGCCAGGCGGCGGCTTCGACCACGGCTTCCTGAGCCGCGCCGTGGCCAGCGGCGCGCCAGTCG
GCCCGCCCGGGATGCACCACCGCATGGTCGGCGGCGGGGCCGCGATGGGGATGATGGCGCCGTCGTCCTTCGCCGAGGAG
CTGGAGCTAGGGTCCCGCGGCGGCGGCGGCGGCGGCGGGCGCCGGGAGCTGACGCTGTTCCCGACCTCCGGCGAGCACTG
AGCGTCGACATCGACGGTGACCGGCATCGAATGGC------------GTCCGTCCGTCCGTCCTCCTCGGGTATATAAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>chr1A_1_TraesCS1A01G258400
ACCAGTATTACCACTTCCCTTTTCTGTGCAGAAAGAAAAAAAGAAGAAGCTGCGAGAGTAGACCCAATAGGCCATGTTTA
TTAG--------------------------------------------------CTTGATTGAAAGCGAGATAGGTG---
-------TACCCATT--AAAACAAATGGTGAGAATGCAAGGAGCCTTTGACCGCTGCATTCACAATCAAATCCAGTGAAA
TACGATTTTTTT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------AGTAACTTTTAACCGGAACAGCGACATGAGATTCACCCAACCAAATC
CTACTCCTGCTACATTCCTAGACGCTGAACGGCTGTACCTGCGGCAGCAGCAGCAGCAGCAGCTGCTAGGTGGGAGCACG
TACCAGATCCAG------CCCTCCCTCCCACCCCTGCGTGCATAGATCCAGTC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GGTCCAGACGATCGATCCGTCCTCCGTCCGTCCGTCCGTCCAGGCAAC---CAACGCGGGACGCG
CGCGATATCCACCTCGA----CCCCGAGGCCACACGAGCCACACGAGATTCCCCCTCCCCACCACACCACTCCCGCTCCC
CGGTTCGGCTCGGTTCGGTTTGATCCGGCGGGG-----CGAGGCGAGCGACATGTCCACATGAGGACAAACCAAACTCCA
GCTAAGAAGATATCTCCCCGTCGTCTCGTCCCGTCTCGTCCTTTTCCAGTCCAGTGTTTTTGTTTTGTCACCCTGTGCAT
GTGT--TGTGTAGATATGCGCCCCGGAAATCCCGGAAAAACGAAATCGCTCGGCTTATCTTTTTCTTTTCCTCTTTATTA
TTACGTACTCCCTCCGTTCTAAATTACTCGTCGCAGAAATGGATGTATCTAGAACTAAAATACATCTAGATACATCCATA
CCTGCGACAAGTTATTAGTGAGTATTTATGTAGGATATGTAGGAGGAGAGGGGAAAGGGGGAGGAGAATCACGCACAATT
AAAATCGAGTGT-GAAGGCAGGACCAACAAGCGAGCAAACAAAGAAAGCAACCGAGGATAGCACAAAAATAGCTTTAAAG
CCGGACGGACGGA------GGCA------GGGCGGGGCAGCCCACTAGTTGAACTGCACCGCACCACTCCCGAACTCATC
AGATACCCTCCTCCTCACTCATCGTCGGCCTATCGTCCGTCCTAGAGAGAGAGGGA--GAGGGAAGGGGTGAAAAAGGTG
TGAGCAGATTGTTGATAGATAGAGGGG--------GGGAGAGAGAGAAAAGAGGGGGATATCGCAGCAGCAGCCGCAGCA
GCGGGCAGAAAGAAAGACCCAAACGAGTGAGAGAGAGCGCC-------ACGAAAGCTTAGAAGAAGAGAGATCCACCTCG
AAGTAACCCCCCTCCCTCCCTCCCCATCCTCTCCTTCCTCCCCACGCC-------------------CTCCTCCCAGCGC
GAGAGCACGCCGCTGCTGCCAGCGGACGACT-------------GCGGCCAAGGCGGCGAATTGCTCTGCTCCGCTCCGC
TCCGGGCCGGGCCGCGAGGATGAGGGAGGAGGAGGAGCCCAGCTGGTTCGCGCGCTTCGACGAGGACCTGCCGGCGCCCG
ACGAGCTCATGCCGCTCTCGCAGTCGCTCATCACCCGCGATCTCGCCGCCGCCTTCGACATCCCCACCACGCACGGCGGG
GGCGGCCCGCTCAGCGGCGGCGCCGACGGGGCCGGCGGCGCGGGCGGCCAGGAGATGAACGGCGGCGCGTCCTCGGCCGC
CGGCTCCAGCGGCGGCAACGGGGGCGGCAACGGCGAGGAGCCGGCCAGGACCCTCAAGCGGCCGCGCCTCGTGTGGACGC
CGCAGCTGCACAAGCGCTTCGTTGATGCCGTGGCGCACCTCGGCATCAAGAACGCCGTGCCCAAGACCATAATGCAGCTG
ATGAGCGTGGACGGCCTCACGCGCGAGAACGTCGCGTCCCACCTCCAGAAGTACCGCCTCTACCTCAAGCGCATGCAGGG
GCTCGGCAACGGCGGTG---GCGGCGGGGGAGGCAGCCACTCCTCCGGCTCCGGGACCGACGCAGCCACCGAGCACCTCT
TCGCCACCGGGCCCTCCCCGTTCCTCCCGCCCGGCCGCGGCCCGGCCGTCGCCGACCCCTACACCCCCTACGCCGCCATG
CCGTCCCACCCCGCGGCGCACCACCATCACCACCACCCGCAGCAGATCGGCCACTTCCACCACCCCGCCGCGCGCCCGTT
CGGCCACTACGGCGCCGGGCCAGGCGGCGGCTTCGACCACGGCTTCCTGAGCCGCGCCGTGGCCAGCGGCGCGCCAGTCG
GCCCGCCCGGGATGCACCACCGCATGGTCGGCGGCGGGGCCGCGATGGGGATGATGGCGCCGTCGTCCTTCGCCGAGGAG
CTGGAGCTAGGGTCCCGCGGCGGCGGCGGCGGCGGCGGGCGCCGGGAGCTGACGCTGTTCCCGACCTCCGGCGAGCACTG
AGCGTCGACATCGACGGTGACCGGCATCGAATGGC------------GTCCGTCCGTCCGTCCTCCTCGGGTATATAAAA
TTCGTTTTCCCCTCTGCCGCCGCCGCTACTTCCCACAGATCGGCATGGAATCCCAGCAAGATTCAC----CGCATCGTCA
TATCATAGAAGGCCAAGAATTCTTGGGAATTAGCGCTCCGCCACCCACCCATCCATCCATCCAATCCATCCATATTTTCT
ATCTCTCTCTCTCTCTCTCTTGGCCAGTGCTTCTGTTCTGTTCTTGTGTTGCGGATATTTGTCATTGCTGTT-CCCGTTC
TCTCCTTGTTCTTTGCTGTTGATGACATAAAAGCTTAGCCCTAGAGACAATTATTTTAGACGGTAAAAAAGTTGTGAAAA
TTTGGTGCCTGCTAGTAAGTACTTTCATTCATGTTGCTGGTTGTCTGAGGAAAGAAAATTGAATCCTTGCGAATTGCGCG
GAGGATACAGGCTCCAGGGGCCAGTCTGCTCTGCTCATCCCGGCGACTGACACT--------------------------
----TGAGCCGTGATCCCGCGAAACAAGTGATGCAATCATCTACCGTTGCAGATTGCATAGGTGAGTCGACTCGAGTAGA
GATGATATAGGCAGGATTGAATAATGTCAAGGACCCACCCACCCTGAGCTTGGAGGTGAATTTA----------AAGTTT
GTTTGTACCGGCATGATGACAATTTAGCTCCTCGTCCTTCGGGCTTCAGGA-GGATGAACATGTGTAGCAA----AGGTT
GCACTAGTTGCTCTTACATTCTGCTGCCGCTGCTGCTAGGATCATGATTCAGAGCAAGCCAAATTGGAGTTTCTTGTACC
--------AGTAACCATTTGTAAATCTTCCCTGCTCCATTTTAAAATCTTACTGTTTCCTGTAGC-CTGAGAGAAGAACA
A------AAAAA--AGAAAACCATGTTGAATTGTGCGCGTACAGTGGTGCTTAATTGGGGGTATGTTCAAATCAACAGTA
TCTC---CCTGCTCTCCCAATGCGCGAACGCGTCACACTATTCACTAGCAGGTGTGAAGCAGGCATTCCCAACCACGCTG
ACAGTATCTTGCCCACCTGATCATCTGAG
>chr1B_6
-----TATTACCACTTCCCTTTTCTGTGCAGAAAGAAAAAA----GAAGCTGCGAGAGTAGACCCAATAGGCCATGTTTG
GATCACCCATGACTAAAAGTAGTCCCATGACCCAATAGCCGGGGACAGCCGTTTCTTGATTGAAAGCGAGATTGGTGGAT
TTTATAGTACCCATA--GAAACAAACGGTGAGAATGCAAGGAGCCTTTGACCGGTCCAATCACAATCAAATCGAGTGAA-
TACGATTTTTTAAGCCCTGTTTGGTTCATAAGTCCTAAGACTTTTTTAGTCCCAACTTATAAATCTCAAGTCCCTAAAAA
GTCCCTACCTGTTTGATTCCTGGGACTTATAAGTCCCTATAAGACCATATTACAACTATAAGTCCCTCCTTGAGAGTCTT
ATTTCATAAGTCCCAAATGCCCACTATAAGTCCCTATAAATCCCTCCTGTTTGGTTTAAATGGGACTTATAGGGACTTTT
TTAAGTCCCTAAAGCCAATAAGTCCCTGGAAACAAACACCCTCTAAGTACTTCCTCTATAAACTAATATAATATCATAGT
GATCTAAACATTTTTATATTAATTTACGGAGGGAGTAACTTTTAACCGGAACAGCAACATGAGATTCACTCAACCAAATC
CTACTACTGCTACATTCCTAGATGCTGAACGGCTGTACCTGCGGCAGTAGCAGCAGCAGCA---GCTAGGTGGGAGCACG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGGTCCACACGATCGATCCGTCCTCCGTCCGTCCGTCCATCCAT---CCAGGCAACGCGGGACGCG
AGAGATATCCACCTCGATCGACCCCGAGGGCACACGAGCCACACGAGATTCCCCCTCCCCA-----CCACTCCCGCTCCC
TGGTTCCGTTCGGTTGGGTGTGATCCGGC-----GAGACGAGGCGAGCGACATGTCCACATGAGGACAAACCAAACTCCA
GCTAAGAAGATATCTCCCCGTCGTCTCGTCCCGTCTCGTCCTTTTCCAGTCCAATGTTTTTGTTTTGTCATCCTGTGTGT
GATGCATGTGTAGATACGTGCCCCGGAAATCCCGGGAAAACGAAATCTCCCGACTTATCTTTTTCATTTTCTCTTTATTA
CT------------------------------------------------------------------------------
--------------------CGTATTTATCTAGGATATGTAGGAGGAGATGGGAAAGGGGGAGGAGAATCACACAT----
--AATTGAGTGT-GAAGGCAGGACCAACAAGCGAGCAAACAAACAAAGCAACCAGGGATAACACAAAAATAGCTTTAAAG
CCAGACAGAGGCAGGGCAGGGCA------GGGCGGGGCAGCCCACTAGTTGAACTACACCGCACCACTCCCGAACTCGTG
AGATACTCTCCTCCTCACTCATCATCGGCCTAGCGTCCATCCTAGAGAGAGAGAGA--GGGGGAAGGGGCGGAAAAGGTG
TGAGCAGATTGTTGATAGATAGGGGGG--------G----AGAGAGAAAAGAGGGGGATATCACAGCAGCAGCCGCAGCA
GCGGGCAGAAAGAAAGACCCAAACGAGTGAGAGAGGAGA--GAGAGAGACGAAAGCTTAGAAGAAGAGAGATCCACCTCG
AAGTAACC-CCCTCCCT-CCTCCCCATCCTCTCCTTCCTCCCCACGCC-------------------CTCCTCCCGTGCT
CTCTCGCTT--GCTGCTGCCAGCGGAGGACT-------------GCGGCCAAGCCGGCGAATTGCTCTGCTCCGGGCTT-
--------GG-----GAGGATGAGGGAGGAGGAGGAGCCAAGCTGGTTCGCGCGCTTCGACGAGGACCTGCCGGCGCCGG
ACGAGCTCATGCCGCTCTCGCAGTCGCTCATCACCCGCGATCTCGCCGCCGCCTTCGACATCC---CCACGCACGGCGGG
GGCGGCCCGCTCAGCGGCGGCGCTGA---------CGGCGCGGGCGGCCAGGAGATGAACGGCGGCGCGTCGTCGGCCGC
CGGCTCCAGCGGCGGAAACGGCGGCGGCAACGGGGAGGAGCCGGCCAGGACCCTCAAGCGGCCGCGCCTCGTGTGGACGC
CGCAGCTGCACAAGCGGTTCGTCGACGCCGTGGCGCACCTCGGCATCAAGAACGCCGTGCCCAAGACCATAATGCAGCTG
ATGAGCGTGGACGGCCTCACGCGCGAGAACGTCGCGTCCCACCTCCAGAAGTACCGCCTCTACCTCAAGCGCATGCAGGG
GCTCGGCAACGGCGGCG---GCGGCGGGGGAGGCAGCCACTCCTCCGGCTCCGGGACCGACGCGGCCACCGAGCACCTCT
TCGCCACCGGGCCCTCCCCGTTCCTCCCGCCCGGCCGCGGCCCGGCCGTCGCCGACCCTTACACTCCATACGCCGCCATG
CCCGCCCACCCCGCCGCGCACCACCATCACCACCACCCGCAGCAGATCGCCCACTTCCACCACCCCGCCGCGCGCCCGCT
CGGCCACTACGGCGCCGGGCCAGGCGGCGGCTTCGACCACGGGTTCCTGAGCCGCGCCGTGGCCAGCGGCGCGCCAGTCG
GCCCGCCCGGGATGCACCACCGCATGGTCGGCGGCGGGGCCGCGATGGGGATGATGGCGCCGTCGTCTTTCGCCGAGGAG
CTGGAGCTCGGGTCCCGCGGCGGCGGCGGCGGCGGCGGGCGCCGGGAGCTGACGCTGTTCCCGACTTCCGGCGAGCACTG
AGTGTCGACATCGACGGTGACCGGCATCGAATGGCGGAGGGGCATCCGTCCGTCCGTCCGTCCTCCTCGGGTATATAAAA
TTCGTTTTCCCCTCTGCCGCCGCCGCTACTTCCCACAGATCGGCATAGAATCCCAGCAAGATTCAC----CACATCGTCA
TATCATAG-AGGCCAAGAATTCTTGGGAATTAGCGCTCCGCCACCCA------------TCCAATCCATCCATATTTTCT
ATCTATCTCTCTCTTC------GCCAGTGCTTCTGTTCTGTTCTTGTGTTGCGGATATTTGTCATTGCTG-T-CCCGTTC
TCTCCTTGTTCTTTGCTGTTGATGACATAAA-GCTTAGCCCTAGAGACAATTATTTTAGACGGTAAAAAAGTTGTGAAAA
TTTGCTGCCTGCTAGTA----CTTTCATTCATGCCGTTGGTTCTCTGAGT----AAAATTCAATCCTTGCGAATTGCGCG
GAGGAT-------CCAGGGGCCAGTCTGCTCTGCTCATCTCGGCGACTGACACTTGGTCCTTGAGTGATGCAACCATCTG
CATGTGAGCTGTGATCCCTCCAAACAAGTGATGCAATCATCTACCATTGCAGATTGCATAGGTGAGTT-----GAGTAGA
GATGATATAGGCAGGATTGAATAATATCAAGGACCCACCCACCCTGAGGTTGGAGGTGAATAAGTTTGAGAATTAAGTTT
GTTTGTACCGGCATGATGACAATATAGCTCCTCGTCCTTTGGGCATCA-GA-GGATGAACATGTGTAGCAAAGGAAGGTT
GCACTAGTTGCTCTTACATTCTGCTGCTTCT------AGGATCATGA-TCAGAGCAACTCAAATTGGAGTTTCTTATGGT
AGTAGTGTAGTAATCATTTGTAAATTTTCTCTTTTCCCTTCTAAAAGCTTCTTGTTTCTTGTAGCGCCAATAATAACAAA
ATAAATTAAAAC--TGAAAACCTTGTTGAATTGTGCGAGGACAGTGATGCTTAATTGGGAGTATGTTCAAATCAATAGTA
--------------------------------------------------------------------------------
-----------------------------
>chr1D_11
----------CCAGTTCCCTTTTCTGTGCAGAAAGAAAAAA-----AAGCTGCGAGAGTAGACCCAGTAGGCCATGTTTA
TCAG--------------------------------------------------CTTGATTGAAAGCGAGATAGGTGGAT
TTTATAGTACCCTTTAAAAAACAAACGGTGAGAATGCAAGGAGCCTTTGACCGCTCCATTCACAATCAAATCCAGTGAA-
TACGATTTTTTT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------AGTAACTTTTAACCGGCACACCAACATGAGATTCACCCAACCAAATC
CTACTCCTGCTACATTCCTAGACGCTGAACGGCTGTACCTGCGGCAGCAGCAGCAG---CA---GCTAGGTGGGAGCACG
TACGAGAGATCCAGCCCTCCCTCCCTCCCACCATTGCGTAGATAGATCCAGTC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GGTCCAGGCGATCGATCCGTCCTCCCTCCGTCCGTCCGTCCAGCAGCCAGGCAACGCGGGACGCG
AGCGATATCCACCTCGATCGACCCCGAGGACACACGAGCCACACGAGATTCCCCCTCCCCACCACTCC---CCCGCTCCC
CGGTTGGGTTCGGTTGGGTGTGATCCGGCGAGGTGAGACGAAGCGAGGGACATGTCCACATGAGGACAAACCAAACTCCA
GCTAAGAAGATATCTCCTCGTCGTCTCGTCC----------TTTTCCAGTCCAGTGTTTTTGCTTTGTCATGCTGTGTGT
GATGCATGTGTAGATGTGTGCCCCGGAAATCCCGGAAAAACGAAATCGCTCGGCTTATCCTTTTCTTTTCCTCTTTATTA
G-------------------------------------------------------------------------------
---------------TAGTACGTATTTATCTAGGATATGTAGGAGGAGATGTGAAAGGGGGAGGAGAATCACACAG----
--AATTGAGAAGGGAAGGCAGGACCAACAAGCGAGCAAACAAACAAAGCAACCACGGATAACACAAAAATAGCTTTAAAG
CCAGCCAGACAGA------GGCAGCGCAGGGGCGGGGCAGCCCACTAGTTAAACTGCACCGCACCACTCCCGAACTCATC
AGATACTCTCCTCCTCACTCATCATCGGCCTAGCCTCCGTCCTAGAGAGAGAAAGAGAGAGGGAAGGGGTGGAAAAGGTG
TGAGCAGATTGTTGATAGATAGAGGGGGAGAGAGAG----AGAGAGAAAAGAGGGGGATATCACAGCAGCAGCCGCAGCA
GCGGGCAGAAAGAAAGACCCAAACGAGTGAGAGAGGAGAGAGAGAGAGACGAAAGCTTAGAAGAAGAGAGATCCACCTCG
AAGTAACC-CCCTCCCTCCCTCCCCATCATCTCCTTCCTCCCTTCCCCCGCTCTCCTCTCCTCTCCTCTCCTCCCGTGCT
CTCTCGCTT--GCTCCTGCCAGCGGAGGACTGCGGCTTGCTACCGCGGGCAAGGAGGCGAATTGCTCTGCTCCGCCCTGC
TCCGGCCCGG-----GAGGATGAGGGAGGAGGAGGAGCCCAGCTGGTTCGCGCGCTTCGACGAGGACCTGCCGGCGCCGG
ACGAGCTCATGCCGCTCTCGCAGTCGCTCATCACCCGCGATCTCGCCGCCGCCTTCGACATCC---CCACGCACGGCGGG
GGCGGCCCGCTCAGCGGCGGCGCCGACGGGGCCGGCGGCGCGGGCGGCCAGGAGATGAACGGCGGCGCGTCGTCGGCCGC
CGGCTCCAGCGGCGGCAACGGGGGCGGCAACGGGGAGGAGCCGGCCAGGACCCTCAAGCGGCCGCGCCTCGTGTGGACGC
CGCAGCTGCACAAGCGCTTCGTCGACGCCGTGGCGCACCTCGGCATCAAGAACGCCGTGCCCAAGACCATAATGCAGCTG
ATGAGCGTGGACGGCCTCACGCGCGAGAACGTCGCGTCCCACCTCCAGAAGTACCGCCTCTACCTCAAGCGCATGCAGGG
GCTCGGCAACGGCGGCGGCGGCGGCGGGGGAGGCAGCCACTCCTCCGGCTCCGGGACCGACGCCGCCACCGAGCACCTCT
TCGCCACCGGGCCCTCCCCGTTCCTCCCGCCCGGCCGCGGCCCGGCCGTCGCCGACCCCTACACCCCCTACGCCGCCATG
---------CCCGCCGCGCACCACCATCACCACCACCCGCAGCAGATCGGCCACTTCCACCACCCCGCCGCGCGCCCGCT
CGGCCACTACGGCGCCGGGCCAGGCGGCGGCTTCGACCACGGGTTCCTGAGCCGCGCCGTGGCCAGCGGCGCGCCAGTCG
GCCCGCCCGGGATGCACCACCGCATGGTCGGCGGCGGGGCCGCGATGGGGATGATGGCGCCGTCGTCTTTCGCCGAGGAG
CTGGAGCTCGGGTCCCGCGGCGGCGGAGGCGGCGGCGGGCGCCGGGAGCTGACGCTGTTCCCGACTTCCGGCGAGCACTG
AGTGTCGACATCGACGGTGACCGGCATCGAATGGCA----------------TCCGTCCGTCCTCCTCGGGTATATAAAA
TTCGTTTTCCCCTCTGCCGCCGCCGCTACTTCCCACAGATCGGCATAGAATCCCAGCAAGATTCACGCCCCACATCGTCA
TATCATAG-AGGCCAAGAATTCTTGGGAATTAGCGCTCCGCCACCC-------------------------ATATTTTCT
ATCTATCTCTCTCTTC------GCCAGTGCTGCTGTTCTGTTCTTGTGTTGCGGATATTTGTCATTGCTG-TTCCCGTTC
TCTCCTTGTTCTTTGCTGTTGATGACATAAAAGCTTAGCCCTAGAGACAATTATTTTAGACGGTAAAAAAGTTGTGAAAA
TTTGCTGCCTGCTAGTA----CTTTGATTCGTGTTGTTGGTTGTCTGAGGAAAGAAAATTCAATCCTTGCGAATTGCGCG
GAGGAT-------CCAGGGGCCAGTCTGCTCTGCTCATCCCGGCGACTGACGCTTGGTCCTTGAGTGATGCAACCATCTG
CATGTGAGCTGTGATCCCTCCAAACAAGTGATGCAATCATCTACCATTGCAGATTGCATAGGTGAGTC-----GAGTAGA
GATGATATAGGCAGGATTGAATAATGTCAAGGACCCACCCACCCTGAGCTTGGAGGTGAATAAGTCTGAGAATTAAGTTT
GTTTGTACCGGCATGATGGCAATTTAGCTCCTCGTCCTTTGGGCTTCA-GGGGGATGAACGTGTGTAGCAAAGG------
-------TTGCTCTTGCATTCTGCTGCTGCT------AGGATCATGATTCAGAGCAACCCAAATTGGAGTTTCTTGTA--
------GTGGTAACCATTTGTAAATCTTCCCTGCTCCATTTCAATAGCTTGTTGTTTCCTGTAGCCCTGAGAGAAGAACA
A------AAAAAGTAGAAAACCTTGTTGGATTGTGCGCGTACAGTGATGCTTAATTA-GGGTATGTTCAAATCAACAGTA
CTATTTTCCTGCTCTCCCAATGCGTGAACGCGTCACACTATTCACTAGCAGGTGTGAAGCATGCATTCCCAACTACGCTG
ACAGTATCTTGCCCACCTGATCATCTGAG
>SNPs
SSSSS------------------------------------SSSS-----------------------------------
-S------------------------------------------------------------------------------
-------------------------S-----------------------------S-----------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
-------------------------------------------------------------SSS----------------
---S---SSSSS--------------------SS-----SS---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------SSSS------------------
S----------------------------S-----------------------------------S--------------
--------S------S---S----------S-------------------------------------------------
----------------------------------------------------------------------S------SS-
-SSS--------------S-------------------------------------------------------------
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS----SS--------S-------------------S----------------------S--SSSSS
SS---S-------------------------------------S---------SS-----S-------------------
--S---S-------------------------------------------------------------------------
------S----------------S--------S--------------------S-----------------S--------
------------------------------------SSSS----------------------S-----------------
-----------------------------------SSSSSS---------------------------------------
--------S------------------------------------------------------------------SSSSS
SSSSSSSSSSS---------------S------------------------------------------------S-S--
-----S----SSSSS---------------------------------------------------------------S-
---------------------------------------------------------------SSS--------------
-----------------------------------------------------------------------S--------
---------------------------------S----------------------------------------------
----------------------S--S------------------------------------------------------
--------------------------------------------------------------------------------
---------------S-----------------------------------------------S----------------
--------------------------------------------------------------------------------
--SS----------S---------------------------------------------------------------S-
------------------------------------------S-------------------------------------
-------------------------------------------------------------------S------------
--------S--------------------------------------------------------S--------------
--S-----------------------------------------------------------------------------
----------------------------------------------S------------------------S--------
--------S--------------------------------------SSSSSSSSSSSS---------------------
----S---------SSSSSSSS------------------------------------------------S---------
--------------------------------------------------------------------------------
----S------------SSSS---------------S-----------------------S-------------------
------SSSSSSS-------------------------------------------------------------------
---------S--------S-S------------------------S----------------------SSSSS-------
-------------------------------------------------------------SSS----------------
---------------------------------------S--------S-------------------------------
---------------------------S---SSSSSS--------------------S--------------------SS
----------------------------------------------S---SS----------------------------
----------------------S-----------------------S---------------------------------
SSSS--------------------S------------------------------------S-----------S------
-----------------------------
>forward_1598
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GGGAGGAGAATCACGCACAA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_3376
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TCTCTTGGCCAGTGCTTCTG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
