>input_sequence_52056
--------------------------------------------------------------------------------
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----------------------------------------AGACCACCCAAACAAACCCTAGATCCACGACGCCTTGCTC
TGACAGACCTGATGGCGCTTCGCTCTGCCCTCAGGAAGATGCCTGCCCTCGGTAGGTCGCTCGGGATGGCCCCCCGTACG
GGCCTCGTGCACGCGCTCTCGCTCTCGCTCTCGCCGCCGGCGTGTTCTCGCCTGATGTCCCATGTCCCACAGCCACAGGT
GAGCTATCA--GCTTGGATGTTCTACAAGTTAG---ATCTGATAGCCGGCGGTTCGGTTTTGCTGTTTCTTTCTCTAGTT
TCCTCTAATTTACAACTTATTAGACAATTCAATCACCCCCACCGCGATTTTGCTAGTTTCA-------------------
---------------------CAAA-TATCTGATTCCCGCCGGTCGATTTTGCTCTCTATTAAGTTACATTGTGAGTAAT
TTTTTTACTACTTTTTAGACAAATCGCCCACCACAAGTTAGATCAGACCCCGCCCGTGTGATTTTGCTTTTTTTTCCCGT
CTAGTTTCATCTAATTTACAGCTTTTTAGACAAACCAACTACCTGAAGTTAGATCTGATCCCAGACGATGCGATTTTGCT
CTTTTCCCCTCAGTATCATCGAGTGTCAAAAAGGTTCTTATATTATGAGACGAAGGGAGTAATTTTT---AACTTTTTAG
AGAAATCAATAACCAGTATATATGAGAGGATGTTTGGATGTTGAAAGGTTTTTGTAAGGATATATTCTATTATTACAAAA
GTCAATAAGGATTACTTATTTAGATTTGACCGTAGACCAAAATTTAAAATTTATTGGGTCTTTCTCAACTCTTGAGGCAT
GCATGATTATTTACTTTATTGCAGCTTCCTGATGAAATTCTAGCTTTTTTTAACCTGTACACATGCACTTAAACATTAGG
AAGAAGAGCTGTTTTATTCTGATGAAGCGCGCGCCAAACGGCGCGAGGAATTCAATCGCACTGAAGCAAGTTTTGAGCAG
AGCATGAAGGATATACAGAAAGATTTGGATTTTTTGAAAGAACTTCACAGGTAAATGACCAGAATTTATTATTATAATAA
TTACGCTTGATACTGTTTGTGAACACTCTGGGTCTCAAAACCTTTGTGTGT--GCAGAATGTGTTGCTCTGTATTTTCAG
AC----AAGGAAGCTGTATTTTCAGACAAGGAAGTTGTTATACAAATAACGCTTGCATGCTTATTGACCAGATTATAAAC
TTTGTGTACACTATGTTTTATGTGCACGTAAACAGAACATGTACGTAATACATAACTTTTTCTCT-AACATAATCACCCT
TCTATGCGCAGTCGTGAATGGCCTGATCCTGAAGAAAATTTCCGCAAGGA-GCTTCGCAAATTTGAGAAGAAATGTGATA
TTGCTCTTCTTGTACTCGTGCCTACAACTGCTGTGCTCTTTATGAGTATACCATATTACCTTTAGCGGGTTATAAGAAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>chr7B_1_TraesCS7B01G305300
TTTTAAAAAGAGAATTTTAAATACAATATTCAATAAATCATAAAATGTTTCTGGTTTAAGAAAATGTTTGTAATTTTTTT
AAAAAGTGTCTGCATATTCAGAAAATGTTCTTAACTTTGAAAATAAATGTTTGGAAAATAAAAAAATATTCATGAATTTT
TTTTAAAAAATTGAGTATTA-AAAATATAAATAAAATTGAACAAAATGTTCATCAAAATATTATCGGCAACACATGGATG
CAGCAGAATGTTTTCATGGTCTTTGGATATTATGATTTATTTCTCCCTATGCAACACATGGACTCTTTTGCTAGTATTAC
TTGCGGTGAATCCTGGAAATAATTTTTTTTAACACAGTGCAAATGCAAGCGTTCATATATACATGCATACACTCACCCCT
ATGAACGCACACACCCACATCCTACTCCTATGAACACGTTCGAGAGACTGAGCCGGCATATCATTTTGAGATTTACGAAG
CCACCGTAGTCGCCTCATCGTCGATGGGAACATCTCCTCCCACTGAAAGCGCATCATCAGAAATTCTAAAATAAATTCAA
AAATAATGCGAGCACCATGACTTGAACCCTCATGTGCTGAGGATATCATTATCTCTCTAACCATCCAACCATAGGTAGGT
TCGCATCATAAAAACAATATTGCTCTGAAATTGGACTTGGATTGAAA-------GATTATATTATACTAGTAGGGAGAAG
TGTATGTACTACACGGTTAGCATGTGTAG----------TTTTTTTTTTGAGAATTTTAGCGTGTGTACTGTGTTTAGAG
AAAAAAAAAATGGGGATCGAATTGGGCCAGCGCTACAAGTTA---TGTTGGTGGCGGAACCGGACCTACTTACTTACCGA
GGAATACCGCTAA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------AAAACAAAACTTACCGAGGAGTT--------------------------------------------------
----GGAGAGCGACCTGGTCCGTCCGCTCCTGTTTTTTTTTTTAGGGAGGTCCGCCCGCTCCTGTTTTTTTTTATATAAT
GTGAGGCTCCCCGTCTCT-----------GAAGCGAAATCAGACCACCCAAACAAACCCTAGATCCACGACGCCTTGCTC
TGACAGACCTGATGGCGCTTCGCTCTGCCCTCAGGAAGATGCCTGCCCTCGGTAGGTCGCTCGGGATGGCCCCCCGTACG
GGCCTCGTGCACGCGCTCTCGCTCTCGCTCTCGCCGCCGGCGTGTTCTCGCCTGATGTCCCATGTCCCACAGCCACAGGT
GAGCTATCA--GCTTGGATGTTCTACAAGTTAG---ATCTGATAGCCGGCGGTTCGGTTTTGCTGTTTCTTTCTCTAGTT
TCCTCTAATTTACAACTTATTAGACAATTCAATCACCCCCACCGCGATTTTGCTAGTTTCA-------------------
---------------------CAAA-TATCTGATTCCCGCCGGTCGATTTTGCTCTCTATTAAGTTACATTGTGAGTAAT
TTTTTTACTACTTTTTAGACAAATCGCCCACCACAAGTTAGATCAGACCCCGCCCGTGTGATTTTGCTTTTTTTTCCCGT
CTAGTTTCATCTAATTTACAGCTTTTTAGACAAACCAACTACCTGAAGTTAGATCTGATCCCAGACGATGCGATTTTGCT
CTTTTCCCCTCAGTATCATCGAGTGTCAAAAAGGTTCTTATATTATGAGACGAAGGGAGTAATTTTT---AACTTTTTAG
AGAAATCAATAACCAGTATATATGAGAGGATGTTTGGATGTTGAAAGGTTTTTGTAAGGATATATTCTATTATTACAAAA
GTCAATAAGGATTACTTATTTAGATTTGACCGTAGACCAAAATTTAAAATTTATTGGGTCTTTCTCAACTCTTGAGGCAT
GCATGATTATTTACTTTATTGCAGCTTCCTGATGAAATTCTAGCTTTTTTTAACCTGTACACATGCACTTAAACATTAGG
AAGAAGAGCTGTTTTATTCTGATGAAGCGCGCGCCAAACGGCGCGAGGAATTCAATCGCACTGAAGCAAGTTTTGAGCAG
AGCATGAAGGATATACAGAAAGATTTGGATTTTTTGAAAGAACTTCACAGGTAAATGACCAGAATTTATTATTATAATAA
TTACGCTTGATACTGTTTGTGAACACTCTGGGTCTCAAAACCTTTGTGTGT--GCAGAATGTGTTGCTCTGTATTTTCAG
AC----AAGGAAGCTGTATTTTCAGACAAGGAAGTTGTTATACAAATAACGCTTGCATGCTTATTGACCAGATTATAAAC
TTTGTGTACACTATGTTTTATGTGCACGTAAACAGAACATGTACGTAATACATAACTTTTTCTCT-AACATAATCACCCT
TCTATGCGCAGTCGTGAATGGCCTGATCCTGAAGAAAATTTCCGCAAGGA-GCTTCGCAAATTTGAGAAGAAATGTGATA
TTGCTCTTCTTGTACTCGTGCCTACAACTGCTGTGCTCTTTATGAGTATACCATATTACCTTTAGCGGGTTATAAGAAAC
ACACTATCTTAGTTTTAGCTATCCTGGTTGTAGTGATCGAGGCTTTAGGCATTATTAAGTACGTAGCTATGTATTATCCT
GGTTTGACTCGTGTAATCTGAATGCACCTACTTACA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CTAAACAGTGGATGCTACTCGTCGAATT
CCCATGGCTGTATACTCGTTCTCTCCTTGTTGGATCTGACATATGACGTGAAATACATACGTCACTCTTCTTTTTTTTGA
ATTATATATAAGGGGTTGCTCCCCAATTTCATTTACTGAAATTGAAAGGCAAAC-AAACTTCCCAATTATTACAGACA--
-------AAGAAAGCCAAAACTGGACATCAAAGGTAAAAGACCCGAGATTCTTTTAACTAGAAACTAGTAGAGCTGTCGA
CATCGTTTTCAGCAGCTCATTCAAGAAGTCTTTATACAGCATTTCCCGCCTGTCATCCGGCATTCCTCAACACCATTGGC
ACCCTGTCTAGTTGCCTGCATAAGGCCTAGGCCCGCGCGGGAAGGGAACAGGCTGTTTGATTGACTGATTTTACTGTTGA
GCCTGCATAGCGCGAAACTTAAAACATCTTTGGACCTGGCTCACTAGAAGATCGGCGGTTTCTCGCGAGCTGGCCCTTGC
ACTAGTGGAGATGGGAGGGATGCGAGTGATTACACCTCCAGTAAGCTTCTCTCTAATCTCCTCTCTTCCTTGTTCCTCTG
ATCTACACAACGGTGCTTCGGTTTAAGGTAATCTCTACACGAAAAAGATGCACCTCGATGCTACGGTTCCATTCAGGCGA
TCGGTTCGTAGTTTCGTCGGTCGTAAGTTCTTAATCTCGTGTTCTCGTTTGGAGCTATTTTGGACGAATCTTGTCCGATT
CGTCGCGCACGATCGATCATTTGAAATTTCCTTTGACCAGTAGCCTAATCTCGCAGTTCCTCACAACATTCGTGTTGTAA
GTTTTTGATTTCGACGATCGTAGTTTCATCTCTCTTTGAACAGCAGTCTACTGCACTGACGCCGC
>chr2B_1
TTTTAAAAAGAGAATTTTAAATACAATATTCAATAAACCATAAAATGTTTCTGGTTTAAGAAAATGTTTGTAATTTTTTT
AAAAGGTGTCCGCATATTCAGAAAATGTTCTTAACTTTAAAAATAAATGTTTGGGAAATAAAAAAATATTCATGAAA-TT
TTAGAAAAGATTGTGTATTAAAAAATATAAATAAAATTAAACAAAATGTTCATCAAAATATTATCGGCAACACATGGATG
CAGCAGAATGTTTTCATGGTCTTTGGATATTATGATTTATTTCTCCCTATGCAACACATGGACTCTTTTGCTAGTATTAC
TTGCGGTGAATCCTGAAAATA-TTTTTTTTAACACAGTGCAAATGCAAGCGTTCATATATACGTGCATACACTCACCCCT
ATGAACGCACACACCCACATCCTACCCCTATGAACACCTTCGAGAGATTGAGCCGGCATATCATCTTGAGATTTACGAAG
CCACCGTAGTCGCCTCATCGTCGACGGGGACGCCTCCTCCCACTGAAAGCGCATCATCGAAAATTCTGAAATAAATCCAA
AAATAGTGCGAGCACCATGACTTGAACCCTCGTGCGCTGGGATACCACTG------------------------------
TCCCATCTTGAAAATGATATCGATTGGAAATTGGACTTGGGTTGACACGTACACGATTATATTATACTAGTAGGGAGAAG
TGTATGTACTACACGTTTTGCGTGTGTAGTTTTTCTTCTTTTTTTCTTGGAGAGTTTTAGCGTGTGTACTGTGTTTAGAG
-AAAAAAAAATGGGGATCGAGTTGGGCCAGCGCTACAAGTTA---TGTTGGTGGCGGAACAGGACCTACCTACCGAGGAG
TTGGAAACTTGGA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------ATATAAT
GTGAGGCTCCCCGTGCCCCTTTTGCCTGGGAAGCGAAATCAGACCACCCAAACAAACCCTAGATCCACGACGCCTTGCTC
TGACAGACCTGATGGCGCTTCGCTCTGCCCTGAGGAAGATGCCTGCCCTCGGTAGGTCGCTCGGGATGGCCCCCCGTATG
GGCCTCATGCACGCGCTCTCGCTCT------CGCCGCCGGCGTGTTCTCGCCTGATGTCCCATGTCCCACAGCCACAGGT
GAGCTATCT--GCTTGGATGTTCTACAAGTTAGATCATCTGATAGCCGGCGGTTCGGCTTTGCTGTTTCTTTCTCTAGTT
TCCTCTAATTTACAACTTATTAGCCAATTCAATCACCCCCACCGCGATTTTGCTAGTTTCAT------------------
--------AAATCAGTCATCACAAA-TATCTGATTCCCGCCGGTCGATTTTGCTCTCTATTAAGTTACATTGTGAGTTAT
TTTTTTACAACTTTTTAGACAAATCACCCACCACAAGTTAGATCAGACCCCGCCCGTGTGATTTTGCTTTTTTTTGCCGT
CTAGTTTCATCTAATTTACAGCTTTTTAGACAAACCGACTACCTGAAGTTAGATCTGATCCCAGACAATGCGATTTTGCT
CTTTTCCCCTTAGCATCATC---------------------------------------TAATTTTT---AACTTTTTAG
AGAAATCAATAGCCCGTATATATGAGAGGATGTTTGGATGGTGAAAGGTTTTTGTAAGGATATATTCTATTATTACAAAA
GTCAACAAAGATTACTTATTTAGATTTGACGATAGACCAAAATTTAAAATTTATTTGGTCTTTCCCAA--CTTGAGGCAT
GCATGATTATTTACTTTATTGCAACTTCTTGATGAAATTCTAGCA-TTTTTAACCTGTACACATGCACTTTAACATTAGG
AAGAAGACCTGTTTTATTCTGATGAAGCGCGCGCCAAACGGCGCGAGCGAATCAAACGCAATGAAGCAAGTTTTGAGGAG
AGCATGAAGAATGTGCAGAAAGATTTGGATTTTTTGAAAGAACTTCACAGGTAATTGACCAGAATTTATTATTATTATAA
TTACGCTTGATACTGTTTATGAACACTCTCGGTCTCAAAACCTTTATGTGTGAGCAGAATGTGTTGCTCTGTATTTTCAG
AC----AAG-------------------------TTGTTATACAAATAACGCTTGTATGCTTATTGACCAGATTATAAAC
TTTGTGTACACTATGTTTTATGTGCCCGTGAACAGAACATGTACGTAATACATAACTTTTCCTCT-AACATAATCACCCT
TGTATGTGCAGTCGTGAATGGCCTGATCCTCGAGAAAATTTCCTCAAGGA-GCTTCGCAAATTTGAGAAGAAATGTGACA
TTGCTCTTCTTGTACTAGTGCCTACAACTGCTGTGCTCTTTATGAGTATACCATATTACCTTTAGTGGGTTATAAGAAAC
ACACTACCTTAGTTTTAGCTATCATGGTTGTAGTGATCGAGGCTTTAGGCATTAAGTAGCTAC-------CTATTATCCG
GGTTTGACTCCTGTAATCTGAATGCATCATGGTTTTAGTGATCAACGTTCCAGGCATTATTAAGTAGT------------
--------------------------------------------------------------------------------
-------GGGTTTGACCTTTGTAGTAATCTGAACTTGTCCAAGCTATAATGGTTCTAGTGATAGAGGTTCCAGGTAT--C
ATGTATTATCCGGGTTTGACTTCATGTAATCTGAATGCAC---CTACTTATGCTAAACAGTGGATGCTACTCGTCCAATT
CCCATGG-------------------------------------------------------------------------
--------------GTTGCTCCCCAATTTCATTTACTGAAATTGAAAGACAAACAAACCTTCCTAATTATTACAGACAGA
CCAACAAAAGAAAGCCAAAACTGGACATCAAAGGTAAAAGACCCGAGATTCTTTTAACTACAAACTAGTACAGATGTCAA
CATCGTTTTCAGCAGCTCATTCAACAAGTCTTTATACAGCATTTCCGGCCTGTGATCCGGCATTCCTCAACACCATTGGC
GCCCAGTCT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr2A_665
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TGAAATTGGACTTGGGTTGGCACGTACACGATTATATTATACTAGTAGGGAGAAG
TGTATGTACTGCACGTTTAACGTATGTATTC-----------TTTTTTTGAGAATTTTAGCGTGTGTACTGTGTTTAGAG
-AAAAG-AAATGGGGATCGAGTTAGGCCAGCGCTACAAGTTAGTATGTTGGTGGCGGAACCGGACCTACTTACCGAGGAG
TTGCAAAAGCGATCCACAAGCAAGAATTTCAAAGCCCATTGTCCACACATCTCTTTATTAGTAGGTATTTAGATGAGGTG
CGAGGAAGTCAGAGGGGCCAAAGTAGAAGTAATTGTTCAGCTACCATTTGAGCTCCTCAAGCATGGAAGCCACCGCCCGT
GAAACATGCAAAGCTTAACGCTAATGCAGCAGTGACAAAAAATACAAACAAAGGAGCCGTGGGAGTTGTGTGTAGGTATG
AACATGGAAATTACCTGAGGGTTCTTGCGGTTGTTTTTGAAGGTTTGACGGAGCCTGAAACTTTGAAAGCGTTTGCGTGT
CAAGAAGCTCAAGTTCTAGGTGAGGATTTGGCACTTCGCAAGATCCATATCACTACCGATTGTCTGAGAGTCATACATGA
GCTTAAGGAGACAGAGCAGCGTAGTGAGTACTGTATGATAGTGAAGGAGATTAACTCTCGTAGATCCTTTTTTTGGCATG
TGAAATATGCCACGAGCAGCGCGAGCACAATTTTGAGGCTCAGACTATTGCTAAGATGGCTACTAGCTTGGATGTGGGAC
GTTATTCGTGGCTCTCCAATCCTCCTAGTAACATTTGTATCCCACAAACCTTGTTTGATTGAAATATAAAAAAGCGCTGT
TTCGTCTAAAAGAAAACTTACCGAGGAGTTGTTTCTCAAAAAATAAAATAAAATTTACCCAGGAGTTGGAATACGATGCG
AGTCGGAGAGCGACCTGGTCCGTCCGCTCCTGTTC-------------------------------------TATATAAT
GTGAG---------GCCCCTTTTGCCAGGGAAGCGAAATCAGACCACCCAAACAAACCCTAGATCGACGACGCCTTGCTC
TGACATACCTGATGGCGCTTCGCTCTGCCCTGAGGAAGATGCCTGCCCTTGGTAGGTCGCTCGGGATGCCCCCCGTACGG
G-------------------GCTCT------CGCCGCCGGCGTGTTCTCGCTTGATGTCCCATGTCCCACAGCCAGAGGT
GAGCTATCTCTGCTTCCATGCTCTACAAGTTAG---ATCTGATAATCGGCGGTTCGATTTTGCTGTTTCTTTCTCTAGTT
TCATCTAATTTACAACTTATATAG--------------CCACCGCGATTTTGCTAGCTTCATAAAATTTTATCACTTTTG
TTTTAGACAAATCAGTCATCACAAAATATCTGATTCCCGCTGGTCGATTTTGTTCTCTATTAAGTTGCATAGAGAG-TAA
TTTTTTACAACTTTTTAGACAAATCACCCACAACAAGTTAGATCAGACCCCGCCCGTGTGATTTTCCTTTTTTTT--CGT
CTAGTTTCATCTAATTTACAGCTTTCTAGACAAACCGACTACCT-AAGTTAGATCTGATCCCAGACGATGCAATTTTACT
CTTTTCCCCTTAGTATCATC---------------------------------------TATTTTTTTAAAACTTTTTAG
AGAAATCAATAACCCTTTTATATGAGAGGATGTTTGGATGGTGAAAGGTTTTTGTAAGGATATATTCTATTATTACAAAA
GTCAACAAGGATTACTTATTTAGATTTGACGATGGACCAAAATTTAAAATTTATTTGGTCTTTCTCAA--CTTGAGGCAT
GCATGATTATTTACTTTATTGCAACTTCTTGATGAAATTCTAGCA-TTTTTAACCTCTACACATGCACTTTAACATTAGG
AAGAAGAACTGTTTTATTCTGATGAAGCGCGTGCCAAACTGCGCGAGCAAAGCAAACGCAATCAAGCAAGTTTTGAGCAG
AACATGAAGAATGTACAGAAAGATTTGGATTTTTTGAAAGAACTTCACAGGTAAATGACCAGAATTTATTATTATAATAA
TTACGCTTGATACTGTTCATGAACACTCTCGGTCTCAAAACCTTTATGTGTGAGCAGAATGTGTTGCTCTGTATTCTCAG
ACAAGGAAG-------------------------TTGTTATACAAATAACGCTTGCATGCTTATTGACCAGATTATAAAC
TTTGTGTACACTATGTTTTATGTGCCCGTGAACAGAACATGTACGTAATACATAACTTTTCCTCTTAACATAATCACCCT
TCTATGTGCAGTCGTCAATTGCCTGATCCTCGAGAAAATTTCCGCAAGAAGGCTTCGCAAATTTGAGAAGAAATGTGACA
TTGCTCTTCTTATACTAGTGCCTACAACTGCTGTGATCTTTATGAGTATACCATATTAACTTTAGTGGGTTATAACAAAC
ACACTATCTTAGTTTTAGCTATCATGGTTCTAGTGATCAAGGCTTTAGGCATTAAGTAGCT------TATCTATTTTCCG
GGTTTGACTCCTGTAATCTGAATGCATCATGGTTTTAGTGATCAACGTTCCAGGCATTATTAAGTACTCCCTCTGTAAAG
AAATATAAGAGCATTTTAGATCACTACAGTAGTGATCCAAATGCTCTTATATTTGTTTACGGAGGGAGTACATGCTATGT
ATTATCCGGGTTTGACCCTTGTAGTAATCTGAACTTGTCCAAGCTATAATGGTTGTAGTGATAGAGGTTCCAGGTATATC
ATGTATTATCCGGGTTTGACTTCCTATAATCTGAATGCACCTACTACTTATGCTAAACAGTGGATGCTACTCGTCCAATT
CCCATGG-------------------------------------------------------------------------
--------------GTTGCTCCCCAATTTCATTTACTGAAATTGAAAGACAAACAAACCTTCCTAATTATTACAGACAGA
CCAACAAAAGAAGTCCAAAACTGGACATCAAAGGTAAAAGACCCGAGATTCTTTTAACTACAAACTAGTACAGCTATCAA
CATCGCTTTCAGCAGCTCGTTCAAGAAGTCTTTATACAGCATTTCCGGCCTGTGATCCGGCATTCCTCAACACAATTGGC
GCCCAGTCT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>SNPs
-------------------------------------S------------------------------------------
----S-----S---------------------------S---------------S---------------------SS--
--SS----S----S------------------------S-----------------------------------------
--------------------------------------------------------------------------------
---------------S-----S----------------------------------------S-----------------
-------------------------S-----------S---------S----------------S---------------
------------------------S---S--SS-------------------------SS-------S--------S---
-----S-------------------------S--S----S-SSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
--S----S-S----SS----S-S-S---------------S----S----------------------------------
---------------S-----S----------------------------------------------------------
S-------------------S----------------------------------------------------SS-SSSS
SSSSS-S---S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
--------------SS-S--------------------------------------------------------------
-------------------------------S----------------------------------------------S-
------S------------------SSSSSS-------------------------------------------------
--------S-----------------------------------------------------------------------
-----------------------S--------------------------------------------------------
-----------------------------------------------------------------------------S--
--------S----------------S-------------------------------------------------S----
------------------------------------S-------------------------------------------
----------S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------
--------------S-------------------------S---------------------------------------
-----S------------------------SS-----------------------S------------SS----------
-----------------------S----S---------------SS------------------------S---------
-------S---------------------------------------S--S----S----S-------------------
---------S--S-------------------------------------------------------------------
------------------S----------S---------------S----------------------------------
---------SSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------------
-------------------------S---S------------------------------S-------------------
------S-----------------------SS----------------------------------------------S-
----------------S------------------------------------------------S--------------
-----------------------S------------------------------SSS--SSSSSSSS---S--------S
----------S---------------S-SSSS-SSS--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS----------------------------------S--------S-----S----------------
------------------------------------------------------------S---------S-------S-
----------------------------------------------S------S--------------------------
S---S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_426
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GCACACACCCACATCCTACT------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_2846
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------GTGTGTGCAGAATGTGTTGCT--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>forward_1696
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TAAT
GTGAGGCTCCCCGTCT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_3959
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------GGGAAGGGAACAGGCTGTTT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
