>input_sequence_52049
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----------ATGGCCCCGCCGTCGTCTTCTCCTCCCCTTCCGGCATGGGCGGCGGCGAACGCCCTCTTCCGACGCCACC
GCCGCCTTCTCCCGCTCCTCCTTCCTCCGGCCTCCCTCTGCGCCCTCCTACCCGTCCTCTCCCACTGCCTCGTTTCCGGC
CTCGCCGGCAACCCCTTCGTCGCCTCCCGCCTCATCCTCGCCTCCTCGCGCCTCTCCCTCACATTCTCCCTCCTCCTCCT
CTCCCACCTTCCAGCCTCCTCCCTCTCGCCCTTCTCCTTCAACTCGCTCATACGCGCGTCGCCTCCAAGCCTCGCCCTCC
GCCTGTTCGAACAAATGCGGCGCCGAGGCGTTCCCACGGATAACTACACCCTCCCCTTCTTGATCCATGCCTGTTCCGGC
AGTGACACTCCACTGGGACAGTCCCTGCACGGGAAGAGCGTCCGTCTTGGTTACAGCTCCCACGTCTTCACGCAGACGGC
GCTGATGAACATGTACTTTGGGTGTGGCCTGGCTGTTCCCGCCGGCAGGGTGTTCGATGAAATGCAGGCCAGGGATCTGG
TTGCATGGACCGGCATGGTCTCTGGTTATGTGGACTCTGGAATGCACCTTCGAGCTGCTGAGGTCTTTAAGGAAATGAGG
GGTAGTGAGGAGGTTGCAAGGCCTAACGTGGCAACGTTGGTGTCGGTTGCTTCTGCCGGTGCTGGTCTTGGCTCCCTGGA
GTATGCTAAGGGGCTGCACGGCTACGTGGAGAAGGTGGGGTTGCGAGGCGATTTGATTGTGACGAATGCACTGATGGATA
TGTATGGAAAGTGTGGTAGCATAGAGTCAGCTCGTGCTCTGTTTGATTTCATGCATGAGAAGGACCTACTTTCATGGACA
ACCATGATTTCAGGGTTGGCTTCTCATGGACATGGCAACGAAGCGGTTGCTTTGTTTTTAAGCATGCGAGAGGTGGGAGT
ACTGCCGGATTCAACCACCTTCATTGTGGTTCTGTCTGCTTGTAGCCATGCTGGACTGGTGGATGAGGGGATATCAATCT
TCAATTCCATGTCGAGTGAATACAGGGTCAACCCAGATATTAAGCATTATGGTTGCATGGTGGATCTTTTCAGCAGGGCA
GGGCTTCTTTCACGTGCTTATGAGCTTATTGACAACATGCCTTTTGAACCAAACTTGGCAATTCTTGGAGCATTGCTGAG
TGCATGCAGTGTCAATAATGATCTGGAGATTGGGGAACTAGTTCTCCAGAAGATTGATTCTGTTTGTTCCTATAAAGGAG
GTGCTGGTGTGCTTCTGTCCAACATCTACGCTAACCAGAACTTATGGCATGAAGTTGATTCCATTAGAAGGAAGATAAGA
AATGGTACCATACCCAGAAAGCCACCTGGTCAGAGTTCGGTGGCATCAGAAGTTCCTTTCATGAGTTTGTAA--------
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>chr6D_1_TraesCS6D01G127400
CATCACCGA-CGTCGATCATCGCCGTCACCATGGCACTGTTGAAGAAAAACACAAGTAGCCTCCACATCCAGATCTAGAA
GAACTCCATTGCAGACCATGCTGCTTTGGGAA-CCGATTAAACGGTCCGTTGGAGGCGACGGAACCGAGTCTTTGTGGCA
TGTCGGTCGG----GGACCATCCCCAAGTCTGCCAGATCTTGACGACGTCGTCTTCATCCAACGTGATCGGAGAAGAAG-
AGCGTCG----------CCATCCGCACACCACACTCCAAGACACCTGCATACTTTGGACC-AGCCGACGATGTCGTCCAA
GAAGACGCCAAGCACCAGCCACCAT-AACCTAACATC-GTCAAAACCAAAGTCCGACGAGACACGGGGGCTACCTG-CTT
TCGGGCGTTGCTGATCGAAGCATCACTAGGGTGGGGAAGAAATAGAGTCATCT-TATTCCGACGCGGCGCTGATTCCACC
ACAAATG----CAACACCTTCGAGAAAAA--CTAAGCCTATCATATCTTGTTGTCGAAGCGAAG-TCGCC----------
------GGGTCCCCGGCCCCTCGGGCCGCCGGAGCGGTAGCTGAAGGGGCCGAGGACCCATAGCCACACAGGCGAAGGAA
GGAGGC--AGAGAAGATCGCCTCACAATCGCCTGTGCAGA--GCGGGTGGTGAGAGAAAAGTTGGAACCGTTTCATGATA
ACCTGGGTGAGTTGAACTGTTGAAGGAGAAGGGCGAGCGGTAGGAGGCGGGAAGGTGGGATAGCATGGGTACTATCTCTC
CGTTCTTTTTGTAGAGATTTCAGTATGGACCACATATGGATGTATCTCAATACATTTTAAAATATAGATTTACTCATTTT
GCTCTGTATGTAGTCCATAGTGAAATCTCCTCAAAGACTTATATTTAGTCCATACTGAAATCTCTACAAAGACTTATATT
TAGAAAAGTATTTTTTTTCTCT-TGTGTACATATACGCTTTCCCCTCAAGAATACGTAACAAAGGATATGCCTTCCGGAC
TGTCGTTTACATGGCCCCGCCGTCGTCTTCTCCTCCCCTTCCGGCATGGGCGGCGGCGAACGCCCTCTTCCGACGCCACC
GCCGCCTTCTCCCGCTCCTCCTTCCTCCGGCCTCCCTCTGCGCCCTCCTACCCGTCCTCTCCCACTGCCTCGTTTCCGGC
CTCGCCGGCAACCCCTTCGTCGCCTCCCGCCTCATCCTCGCCTCCTCGCGCCTCTCCCTCACATTCTCCCTCCTCCTCCT
CTCCCACCTTCCAGCCTCCTCCCTCTCGCCCTTCTCCTTCAACTCGCTCATACGCGCGTCGCCTCCAAGCCTCGCCCTCC
GCCTGTTCGAACAAATGCGGCGCCGAGGCGTTCCCACGGATAACTACACCCTCCCCTTCTTGATCCATGCCTGTTCCGGC
AGTGACACTCCACTGGGACAGTCCCTGCACGGGAAGAGCGTCCGTCTTGGTTACAGCTCCCACGTCTTCACGCAGACGGC
GCTGATGAACATGTACTTTGGGTGTGGCCTGGCTGTTCCCGCCGGCAGGGTGTTCGATGAAATGCAGGCCAGGGATCTGG
TTGCATGGACCGGCATGGTCTCTGGTTATGTGGACTCTGGAATGCACCTTCGAGCTGCTGAGGTCTTTAAGGAAATGAGG
GGTAGTGAGGAGGTTGCAAGGCCTAACGTGGCAACGTTGGTGTCGGTTGCTTCTGCCGGTGCTGGTCTTGGCTCCCTGGA
GTATGCTAAGGGGCTGCACGGCTACGTGGAGAAGGTGGGGTTGCGAGGCGATTTGATTGTGACGAATGCACTGATGGATA
TGTATGGAAAGTGTGGTAGCATAGAGTCAGCTCGTGCTCTGTTTGATTTCATGCATGAGAAGGACCTACTTTCATGGACA
ACCATGATTTCAGGGTTGGCTTCTCATGGACATGGCAACGAAGCGGTTGCTTTGTTTTTAAGCATGCGAGAGGTGGGAGT
ACTGCCGGATTCAACCACCTTCATTGTGGTTCTGTCTGCTTGTAGCCATGCTGGACTGGTGGATGAGGGGATATCAATCT
TCAATTCCATGTCGAGTGAATACAGGGTCAACCCAGATATTAAGCATTATGGTTGCATGGTGGATCTTTTCAGCAGGGCA
GGGCTTCTTTCACGTGCTTATGAGCTTATTGACAACATGCCTTTTGAACCAAACTTGGCAATTCTTGGAGCATTGCTGAG
TGCATGCAGTGTCAATAATGATCTGGAGATTGGGGAACTAGTTCTCCAGAAGATTGATTCTGTTTGTTCCTATAAAGGAG
GTGCTGGTGTGCTTCTGTCCAACATCTACGCTAACCAGAACTTATGGCATGAAGTTGATTCCATTAGAAGGAAGATAAGA
AATGGTACCATACCCAGAAAGCCACCTGGTCAGAGTTCGGTGGCATCAGAAGTTCCTTTCATGAGTTTGTAATTTGGAGG
TGAGCGTACCCATTTTCAATTGAGTTGCTCTTGTCACTGTATGGATTAGGAAGTCATCGCATAAATACATAGTAACCTTA
TCAAATGTTGCTTGTTTCAAGATGTCATGATTCTCATGGTTATGTAAGTTGAGAAATGAATGTGTAAGTTGCACCTCTGC
TCCAAAATAAGTGTCTCAACTTTAGTACAACTTTGTACTAAAGTTGAGACACTTATTTTGGGACGGAGGGAGTACATGCC
ACTACTCTTCTAGAAACTAGATTTTGAGCATGTTGATTGCTGGATAGAGATCAATATCTGTATG----------------
---------------------------------------------GGCAATAAGAATGACAATATCGTTTTTT-GATAGA
GTAAGTTTGGATGACACATTTGCCTATACTTCTGTTATGTAGCAAGACATACATTCTTGTGCTCCAAAACTTGACTTATG
TGCATACTCTCCTTTCTTGATGAGCATCAGTTAGGGCTAATAGGACCTTGTAAATCCTATGATTCCACTAAATATTATGT
C---------------CTCATATGGGGTTTGATTTTCATATGTTTCCACTTGTACTT----------T-GAGTTAATATT
ATTTAGCCTATCTAATATTTC--ATTCTCTGTTTTAGATTCCCATGAGAATTTCTTATTATCATGCCAGTCATTATTGAT
TTTCGAATCTTGGTTAGCTGATCTTTCGTTTTTGTATTCTTCTCAAATGCAGCTTTTAGAGAGAAATCCACTTTGTTGTC
ACTGTTAACCTTGACTGGCAAAATGGCTGATTTTCATGCGAACTGGTAAGAAAGTCTCGTCAGTTACTTTTACGACAAGG
CATCACTATCTCTTCTTTGCTTATGA------------------------------------------------------
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------------AGTAGATATCAGCGTATTATGTCAAAGAAAAGTACTCCCTCCGAGATACCAGTGTGTCACCCATTTTG
TTACTGTGTTGAAATTGTTGTGGTTTTTACTATTGAGTA-TAAGTAGCGAGCATATTATACCTGTGGAATCATAAGTACG
TTGACTGACTGAACTTCTGTTTGCTTTAT
>chr1A_1
CATCACCTGTCGTCGATCACCGCCACCACCATGGCACCGCCGGAGAAAAACGCCAGTAGCCTCCACATCTAGATATGGAA
GAACTCCATTGTAGACCACACTATTTTGTGAA-CCGATTAAACGGTCAGTCAGAGGCGACGGAACCGAGTCTTTGTGACA
CGTCGGTCAG----GGATCATCCCCAAGTCTGCCAGATATTGATAATGTCGTCTTCATCCAACGTGATCGGAGAAGAAG-
AGCGCCACCGCAAGCCGCCATCTGCACA-CACACTCCAAGACATCCGCATACTCTGGACC-AGCTGACGCTGTCGTCCGA
GAAGACACCAAGCACCAGCCACCAC-AACCTAACATC-GTCAAAACCAAAGTCTGACGAGACACAGGGGCTACTTG-CTT
CCCGGCGTTGCTAATTGAAGCATCACTAGGGTGGGGAAGAAGAAGAGTCATCT-TATTCCGACGCGGCATTGATTCTACC
ACAAATG----CAACACCTCTGAGAAAAA--CTAAGCTTA----------------------------------------
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>chr6D_12
------------TCGATCACCGCCATCACTGTAGTATCTTCGAAGAAAGACGTAAGTAGCCTTCACACCCAGATCTAGAA
GAACTCCATTGCAGACCACGCTGCTTTGTGAA-CCGATTAAACGGCCCGTCGAAGGCGATGGAACCGAGTCTTTGTGGCA
CGTCGATCGA----GGATCATCCTCAAGTCTACCAGATCCCGACGGTGTCGTCTTCATCCAT-ATGATCGGAGAAGAAAA
AGCGTCGCCGCAAGCCACCGTCCGCCCACCACACTCCAAGACAC------ACACTGCCCC-AGCCGATGCTGTCGCCCGA
GAAGACACCAAGCACCGGCCAGCAC-AATCTAACATC-GTCAAGACCAAAGTTCGATGAGACACAAGGGCTACATG-CTT
CCTGGCGTTGGCAATTGAAGCATCACCATGGTGTGGAAGAAGCAGAGCCATCT-TATTCCGATGCGACGTTGATTCCACC
ACCAATG----CACCGTCTTCAGAAAAAA--CTAAGTCTATCATATCTAGGCGTCAGAGCGAAG-CCGCC----------
-----GGGGTCCCCGGCCCCTCGGGCTGCCGGAGTGGCAGCCGAAGGGGCCGAGGACCCGTAGCCACACCGGCGAAGAAA
AGAGAC--AGA---GATCGCCTTGCGATCGCTTGTGCGAG--------GGCGAGAGAAAAGTTGGAACC-----------
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>chr4B_14
--------------GATCACCGCTGTCGCCGTGGCACCGCCGGAGAAAGACGTGAGCAGTCTTCACACCCAGATCTGAAA
GAACTTCATTGCAGACCACGTTGCTTTGTGAA-CCGATTAAACGGCTCGTCGAAGGCGGCAGAACCAAGTCTTTGTGGCA
CGTCGACCGA----GGATCATCCCCAAGTCTACCAGATCCCGACCGCGTCGTCTTCATCCAACATGAGCGGAGAAGAAA-
AGCGTCGTCGCAAGCCACCGTCCGCACACCACATTCCAAGGCACCCACATACTCTGCACC-AGCCGATGTTATCGCCCAA
GAAGACGCCAAGCACCAGCCACCAC-AATCTAACATT-GTCAAGACCAAAGTTCAACGAGACACAAGGGCTACCTG-CTT
CTTGGCGATGCTGATTGAAGCATCAC-ATGGCGGGGGAGAAGCAGGGCCATCT-TATTCCGACGTGAGGTTGATTCCACC
ACCAATG----CAACGCCTCCGAGGAAAA--CTAAGTCTATCCTATCTAGTCGCCGGAGCGAACCT-GCT----------
-----GGGTTCCCCGGCCCCTCGGGCT------------GCCCAAGGGGCCGAGGACTCGTAGCCACACCGGCGAAGAAA
AGCGACATAGA---GATCGCCTCGCGATCGCCTGCGCGAG----------------------------------------
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>chr7B_17
-----------------CATCGCCGTCAT-ATGGCACCGCCGGAGAAGGACATGAGCAACCTCCACACCAAAATCTGGAA
GAACTCCATTGCAGACCATGCTGCTTTGTGAGCCTGATTAAATGGCCGGTCAAAGACGATGAAACCGAGTCTTTGTGGCA
CGTCGGCCGG----AGATCATCTTCAAGTCTGCCAGATCC-GCCGTCGTCGTCTTCATCCAACTTGGTCGGAGAAGAAG-
AGGAGCGCCGCAAGCCATCATCCGCACACCACGCTCCA-----CACATATACTCTGCACAAAACTGACGTAATCGCCCGA
GAGGACACCAAACTCCAGCCAGCAC-AACCTAACATC-GACGAAACCGAAGTCCGACGAGCCACAAGAGCCACCTG-CTT
TCCGACGGTGCCGATTGAAGCACCAATGGAGTGGGGAAGAAGCAGAGCCATCT-TATTCTAACACGGCGTTGATCCCACC
ACTGATGCAACCAACGCCTCTGAGAAAAA--CTAAACCTACCCTATCTAGTCACCAGAGCAAAGTC-ACC----------
-----AGGGTCCCGGATCCCTCGCGGTGCTGGAGCGGCAGCCGGAGGGGCCGAGGACCCACAGCCTCGCCGGCGCAGAGA
GCAGGC--AGAGAGATC---------------------------------------------------------------
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------------------------------GCTTTGGAATCGCATGTG--------------------------------
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>chr5D_26
--------------------------CACCATGGCACCACCGAAGAAAGACGTGAGCAACCTTCACACCCAAATCTAGAA
GAACTCCATTGCAGACCACACTGCTTTGTGAA-CCGATTAAAGGGCCCGCCGGAGACGACAAAACCGAGTGTTTGTGGCA
CGTCAGTCGG----GGATCATCCCCAAGTCTGCCAGATCTTGACGACGTCATCTTCATCCAAAGTGACCGGAGAAGAAA-
AATGTCGCCACAAGCCGCCATCCGCGCACCACGCTCCAAGACATGCACATACTCTGCACC-AGCCGACGCTGTCGCCCGA
GAAGACCCTAAGCACCAGCCACCAC-AAGCTAACATC-ATCAAAACTAAAGTCCGACGAGACACAGAGGCTACCTG-TTT
-CCGGCGCTGCCGATTGAAGCATCACTAGGGTGGGGAAAAAGCAGAGCCAGCT-TATTCCGACGCGGTGTTGATTCCACC
ACCAATG----CAACACCTCCGAGAAAAA--CTAAGCCTATCCTATCTAGTAGCCTTAACGAAGTT-GCC----------
-----GGGGTCCCCAGTCCCTCAGGCCACCGGAGTGGCAGTCGCAGGGGCTGAGGACCTGCAACCACGCCGATGAAGAAA
GGCGGC--AGAGAAGGTCGCCTCTTGATCGCCTATGCGAG----------------------------------------
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>chr3A_26
--------------------------CACCATGGCACCACGGGAGAAAGACGTGAGCAACCTTCACACCAAGATCTAGAA
GAACTCCATTGCAGACCACACTGCTTTGTAAA-CCAATTAAACGGCCTGCCGGAGGTGATGGAATCGAGTCTTTGTGGCA
CGTCGGTCGA----GGATCATCCTCAAGTCTACCAGATCCTGATGGCGTCGTCTTCATCCAAAGTGATCGAAGAAGAAG-
AACGTCACCGCCAACCGCCATCCGCACATCACACTCCAAGATACACGCATACTCAACACT-ACCCGAAGTTGTCGCTCAA
GAAGACGCCAATCACTAGCCACCAC-AACCTAACATC-GTCAAAACCAAAGTCCGACGAGATACAGAGGCTACCTG-CTT
CCCGGCGTTGCTGATTGAAGCATCAACAGGGTGGAGAAGAAGCGGAGCCAATT-TATT----CGCGTCGTTGATTCCACT
ACCAATG----CAACACCTCCCAGAAAAAAATTAAGCTTATCCTATCTAGTTGCTA------------------------
------GGGTCCCCAGCCCGTCGGCCCGCCAGAGTGGCAGCCGAAGGGGCCTAGGACCCGCAGCCACGCTAGCGAAGAAA
GGAGGC--AGAAAAG-----------------------------------------------------------------
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>chr6A_54
------------------------------------------------------AGTAGCCTCCACATCCAGATATGGAA
TAATTTCATTGCAGACCACACTGCATTGGGAA-CCGATTAAACAGTCCGTCGGTGACGAGGGAAGCGAGTCTTTGTGGCA
TGTCGGTCGG----GGATCATCCCCAAGTCTGCCAGATCTTGATGATGTCGTCTTCATCCAACGTGATCGGAGAAGAAG-
AGCGCCGCTGCAAGCCGCCATTCACACACCACACTCCAAGACACTCTCATACTCTGGACC-AGCCGACGATGTCGTCCAA
GAAGACGCCAAGCACCATCCACCAC-AACCTAACATC-GTCAAAACCAAAAATCCGAC-GAGACAAAGGCTACCTG-CTT
CCGGGCGTTGCTGATCGAGGCATCACCAGGGTGGGAAAGAAGTAGAGCCATCTCTATTCCGGCGTGGCTTTGATTCCACC
ACAAATG----CAACACCTCCGAGAAAAA--CTAAGTCTATCCTATCTTGTCGTCGAAGCGAAG-TCGCCGGGGAGGGGG
GGGAGGGGGTCCCCGGCCCCTCGGGCCGCAGGAGCGGTAGCCGAAGGGGCCGAGGACCCGCAACCACACAGGCGAAGGAA
GGAGGC--AGAGAAGATCGCCTCACGATCGCCTGTGCAGAACAGTC--GGTGAGAGAAAAGTTGGAACCGCTTTGTGATA
ACCTCGGTGAGTTAAACTGTTGAAGGAGAAGGGCGAGTAGTAGGA----GGAAGGTGGGATAGCAGGATGGTACTA----
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-----------TTTTTTTCTCT-TGTGTGCATATACGCTTTCCCCTCAACACTACGTAAAAAAGGATATGCCTTCCGGAC
TCTCGTTTACATGGCCCCGCCGTCGTCTTCTCCTCCCCTTCCGGCATGGGCGGCGGCGAACGCCCTCTTCCGACGCCACC
GCCGCCTTCTCCCGCTCCTCCTTCCCCCGGTGTCCCTCTGCGCCCTCCTACCCGTCCTCTCCCACTGCCTCGTTTCCGGC
CTCGCCGGCAACCCCTTCGTCGCCTCCCGCCTCATCCTCGCCTCCTCGCGCCTCTCCCTCACATTCTCCCTCCTCCTCCT
CTCCCACCTTCCAGCCTCTTCCCTCTCGCCCTTCTCCTTCAACTCGCTCATACGCGCGTCGCCTCCAGGCCTCACCCTCC
GCCTGTTCGAACAAATGCGCCGCCGGGGCGTTCCCACGGATAACTACACCCTCCCCTTCTTGATCCATGCCTGTTCCGGC
AGTGACATGGCACTGGGACAGTCCCTGCACGGGAAGAGCGTCCGTCTTGGTTACAGCTCCCACATCTTCACGCAGACGGC
GCTGATGAACATGTACTTTGGGTGTGGCTTGGCTGTTTCCGCCGGCAGGGTGTTCGATGAAATGCAGGCGAGGGATGTGG
TTGCATGGACCGGCATGGTCTCTGGTTATGTGGACTCTGGAATGCACCTTCGAGCTGCTGAGGTCTTTAAGGAGATGAGA
GGCGGTGAGGAGGTTACAAGGCCTAATGTAGCAACGTTGGTGTCGGTTGCTTCTGCGTATGCCAGTCTTGGCTCCCTGGA
GTATGCTAAGGGGCTGCACGGCTATGTGGAGAAGGTGGGGTTGCGAGGCGATTTGATTCTGACGAATGCACTGATGGATA
TGTATGGAAAGTGTGGTAGCATAGAGTCAGCTCGTGCTCTGTTTGATTTCATGCATGAGAAGGACCTACTTTCATGGACA
ACGATGATTTCAGGGTTGGCTTCTCATGGACATGGCAAAGAAGCGGTTGCTTTGTTTTTAAGCATGCGCGAGGTGGGAGT
ACTGCCGGACTCAACCACCTTCATCGTGGTTCTGTCTGCTTGTAGCCATGCTGGACTGGTGGATGAGGGGATATCAATCT
TCAATTCCATGGCGAGTGAGTACAAGGTCACCCCAGATATTAAGCACTATGGTTGCATGGTGGATCTTTTCAGCAGGGCA
GGACTTCTTTCACGTGCTTATGAGCTTATTGATAGCATGCCTTTTGAGCCAAACTTGGCAATTCTTGGAGCATTGCTGAG
TGCATGCAGTGTCAATAATGAACTGGAGATTGGGGAACTAGTTCTCCAGAAGATTGATTCTGTTTGCTCCTATAAAGGAG
GTGCTGGTGTGCTTCTGTCCAACATCTACGCTAACCAGAACTTATGGCATGAAGTTGATTCCATTAGAAGGAAGATAAGA
AATGGTACCATACCCAGAAAGCCACCTGGTCAGAGTTCGGTGGCATCAGAAGTTCCTTTCATGAGTTTGTGATTTGGAGG
TGAGTGTACCCATTTTCAATTGAGTTGCTCTTGTCATTGTATGGATTAGGAAGTCGTCGCATAAATGCATAGTAATCTTA
TCAAACGTTGCTTGTTTCAAGTTG--------------------------------------------------------
----------------------------------------------AGACACTTATTTTTG---GGATGGAGTACATGCC
ACTACTCTTCTAGAAACTAGATTTTGAGCATGTTGATTGCTGGATAGAGATCAATATTTAGGGCTAGACATACATTCTTG
TGCTCCAAAACTTCTGTTATGTAGCAAGACATACATTCTTGTGCTGGCAATAAGAATGACAATATCGTTTTTTTGACAGA
GTAAGTTTGAATGACACATTTGCCTATACTTCTGTTATGTAGCAAGACATACATTCTTGTGCTCCAAAACTTGACTTATG
TGCATACTCTCCTTTCTTGATGAGCATCAGTTAGGGCTAGTAGGACCTTGTAAATCCTAT-ATTCCACTAAATATTATGT
C---------------CTCATATGGGGTTTGATTTTCACATGTTTCCACTTGTACTT----------TAGAGTTAATATT
ATTTAGTCTATCAAATATTTCATATTCTCTGCTTTAGATTCCCATGAGAATTTTTTATTATCATGCCAGTCATTATTGAT
TTTCGAATCTTGGTTAGCTGATCTTTCGTTTTTGTATTCTTCTCAAATGCAGCTTTTAGAGAGAAATCCACTTTGTTGTC
ACTGTTAACCTTGACTGGCAAAATGGCTGATTTTCATGCGAACTGGTAAGGAAGTCTCATCAATTACTTTTACGACAAGG
CAGCTTATGAAGTACTCCCCCGTTCCTAAATATTTGTCTTTTTAGAGATTTTAAATGGACTACCACATACGGATGTATAT
AGACATATTTTAGAGTGTGGATTCACTCATTTTGCTTCGTATGTAGTCACTTGTTGAAATCTCTAGAAAGACAAATATTT
AGGAACGGAGGGAGTAGATATCAGCGTATTATGTCAAAAAAAAGTACTCCCTCCGAGATTCCAGCGTGTCACCCATTTTG
TTACTGTGTTGAAATTGTTGTGGCTTTTACTATTGAGTATTAAGTAGCGAGCATATTATACCTGTGGAATCATAAGCACA
TTGACCGACTGAACTTCTGTTTGCTTTAT
>chr1A_59
-----------------------------------------------------------CCTTCACACCAAGATCTAGAA
GAACTCCATTGCAGACCACACTGATTTATGAA-CCGATTAAACGACCCACAGAAGACGGCAGAACCGAGTCTCTGTGGCA
CGTCGGTCGGCCAGGGATCATCCCTAAGTCTTCTG---------------GACTTCATCCGCACTGATCGGAGAAGAAG-
AACACCGCCGCAAGCGGCCATCCGCACACCACACTTCAAGGCACACGCATACTCTGCACT-AGCAGACGTTGTCGCCCAA
GAAGACACCAAGCACCAGCCATCACA-ACCTACCATCAGTCAAAGCCAAAGTCCGACGAGACATAGAGGCTACCTA-CTT
CCTAGCGTTGTCGTTTGAAGCATCACCAGGATGGGGAAGAAGCACCACCAATT-TATTTTAACACGGCGTTGATTCCACC
ACCAATG----CAACACCTGTGAAAAAAA--CTAAGCCTGTCCTATCTAGTAGCCGAAGTGAAG-T-GCC----------
-----GGGGTCCCCAGCCCGTCGGGCCGCCAGAGTGGCAGCCGAAGGG--------------------------------
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>chr7D_62
--------------------------------------------------------------CCACACCAAGATCTGGAA
GAACTCCATTGCAGACCACGTTGCTTTGTGAA-TTGATTAAATGGCCCGCCGGAGGCGATAGAACCGAGTCTTTGTGGCA
TGTCGGTCGG----GGATCATCCCCAAGTCTGCCAAATCCCGACGGCATTGCCATCATCCAAAG-GATCAGACAAGAAG-
AACGCCGCCGCAAGCCGCCATCCGCACACCACACTCCAACACACATGCATAGCCA-----------ACGCTGTCGCTCGA
GAAGACGCCAAGCACCAGCCACCACAAACCTAACGTC-GTCAAAACCGAAGTCCGACGAGACACAGAGGCTGCCAGCTTC
-CCGGCACTGCCGATTGAAGCATCACCAGGGTGGGGAAGAAGTAGAGCCGATT-TATTCTGACGCGGCATTTATTCCACC
ACCAATG----CAACACCTTCGAGAAAAA--TTAAGCCTATCCTATCGAGTAGCCAGAGCGAAG-TTGCCGG--------
-------GGTCCCCAGCCCGCTGGGCCGCCGAAGTGGCAGCCGAAGGGGCCGAGGACTTGCAGCCGTGCTGGCGAAGAAA
GGAGGC--AGAGAAGTTCGCCTCCCGATTGCCTGTGCAAGGCGCGGTTCGCGAGCGAAAAGTTGGAAC------------
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>chr6B_667
TGA-----------------------------------------------------------------------------
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-------------------------------------------------------------------------------A
ACCTGGGTGAATTGAACCGTTGAAGGAGAAGGGCGAGCGGTAGGAGGCTGGAAGGTGGGACAGCAAGAGGGTACTA----
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-----------TTTTTTCCCCACTGTGTACATTTACGCTTTCTCCTCAAGAATACGTAACAAAGGATATGCCTTCCGGAC
T---GTTTACATGGCCCCGCCGTCGTCTTCTCCTCCCCTTCCGGCATGGGCGGCGGCGAACGCCCTCTTCCGACGCCACC
GACGCCTTCTCCCGCTCCTCCTTCCTCCCGCCTCCCTCTGCGCCCTCCTTCCAGTCCTCTCCCACTGCCTCGTTTCCGGC
CTCGCCGGCAACCCCTTCGTCGCCTCCCGCCTCATCCTCGCCTCCTCGCGCCTCTCCCTCACATTCTCCCTCCTCCTCCT
TTCCCACCTCCCAGCCTCCTCCCTCTCGCCGTTCTCCTTCAACTCGCTCATACGCGCGTCGCCTCCAAGCCTCGCCCTCC
GCCTGTTCGAACAAATGCGCCTTCGAGGCGTTCCCACGGACAACTACACCCTCCCCTTCTTGATCCATACCTGTTCCGGC
AGTGACACTCCACTGGGACAGTCCCTGCACGGGAAAAGCGTCCGTCTCGGTTACAGCTCCCACGTCTTCACGCAGACGGC
GCTGATGAACATGTACTTTGGGTGTGACCTGGCTGTTCCCGCTGGCAGGGTGTTCGATGAAATGCAGGCGAGGGATCTGG
TTGCATGGACCGGCATGGTCTCTGGTTATGTGGCCTCTGGAATGCACCTTCGAGCTGCTGAGGTCTTTAAGGAAATGAGA
GGTAGTGAGGAGGTTGCAAGGCCTAACGTGGCAACGCTGGTGTCGGTTGCTTCTGCCGGTGCTGGTCTTGGCTCCCTGGA
GTATGCTAAGGGGCTGCACGGCTATGTGGAGAAGGTGGGGTTGCGAGGCGATTTGATTGTGACGAATGCACTGATGGATA
TGTATGGAAAGTGTGGTAGCATAGAGTCAGCTCGTGCTCTGTTTGATTTCATGCATGAGAAGGACCTACTTTCATGGACA
ACGATGATTTCAGTGTTGGCTTCTCATGGACATGGCAATGAAGCGGTTGCTTTGTTCTTAAGCATGCGAGATGTGCGAGT
ACTGCCGGATTCAACCACCTTCATTGTGGTTCTGTCTGCTTGTAGCCATACTGGACTGGTGGATGAGGGGATATCAATCT
TCAATTCCATGGCGAGTGAGTACAAGGTCACCCCAGATATTAAGCACTATGGTTGCATGGTGGATCTTTTCAGCAGGGGA
GGGCTTCTTTCACGTGCTTATGAGCTTATTGACAGCATGCCTTTTGAGCCAAACTTGGCAATTCTTGGAGCATTGCTGAG
TGCATGCAGTGTCAATAATGAACTGGAGATTGGGGAACTAGTTCTCAAGAAGATTGATTCTGTTTGCTCCTATAAAGGAG
GTGCTGGTGTGCTTCTGTCGAACATCTACGCTAACCAGAACCTGTGGCATGAAGTTGATTCCATTAGAAGGAAGATAAGA
AGTGGTACCATTCCGAGAAAGCCACCTGGTCAGAGTTCGGTGGCATCAGAGGTTCCTTTCATGAGTTTGTGATTTGGAGG
TGAGGGTGTCCAGTCTCTATTGAGTTGCTCTTGTCATTGTACGGATTAGGAAGTTAC--CACACAAATACAGTAATCTTA
TCAAATGTTGCTTGTTTCAAGATGTCATGATTCTCATGGTTAATTTTTGGA--AAATGAATGTGTAAGTTGCATAA----
------------------------------------------------------------------------TACATGCC
ACTA----------AACTAGATTTTGAGCATGTTGATTGCTGGATAGAGATCAATATCTGTATA----------------
---------------------------------------------AGCAATAGGAATGACAATATTG-TTTTTTGACAGA
GTAAGTTTGGATGACACATTTGCCTATACTTCTGTTATGTAGCAAGACATACATTCTTGTGCCCCAAAGCATGACTTATG
TGCATACTCTCCTTCTTTGATGAGCATCAGTGAGGGCTAGTAGGACCTGGTAAATCCTATGATTCCACTAAATATTATGT
TATATTATGTCCTCAGCTCATATGTGGTTTGAT-TTCACATGTTTCCACTTGTACTTCATTTGCACCT-GAGTTAATATT
ATTCAGCCTATCAAATATTTCATATTCTCTTGTTTAGATTCCCATGAGAATTTTTTATTATGATGA-AGTCATTATTAAT
TTTCCAATCTTGGTTAGCTGACCCTTCTTTTTTGTATTTTTTGCAAATGCAGCTTTTAAAGAGAAATCCACTTTGTTGTC
CCTGTTAACCTTGACTGGCAAAATGGCCGATTTCCATGCGGACTGGTAAGGAAGGCTCATCAATTGCTTTTACGACAAGG
CAGCACTATCTCTTCTTTGCTT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>SNPs
-------SS----------------------------S--S---------------------------------------
--------------------------------------------------S-----------------------------
-----------------S--------------------------------------------------------------
-----------------------------------------------------S--------------------------
------------------------S---------------------------------------S---------------
-----------------------------------------S---------------------------S----------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
-------------------------S--------------------S-----------------------S--SS-----
------------------------------------------------S----------------S-S-SSSSS-SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS---------------------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
-----------S-------S----S-----S---------------S---------------------------------
----------------------------------S------------S--------------------------------
---------------------S--------------------------------------------S-------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
----S-------------------------------S--------------------------------------S----
------------------------------------------SS-SSSSSSSS--------------------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S-SSS---S------------
---------------------------------------------------------------S----------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------S-----------------------------------------
------------S------------------S---------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-------S---S-----------------
--S-------------------S-SS------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S--------------------S----S---------------
-----------------------S----------------------------------------------------S--S
-----S-----------------------
>forward_788
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GGGAAGGTGGGATAGCATGG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_1590
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------CAGGGATCTGG
TTGCATGGA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>forward_1380
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GCCTGTTCGAACAAATGCGG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_2704
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CGGAGGGAGTACATGCC
AC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
