>input_sequence_52038
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---------------------------------ATGTGGACGGGCACCCCGTACTCCTTCGCCGTCCTCGAACGCCTCCT
CCAGGATCACTTCTCCGCCCCTCGCCGCCTCCTCCAGGTCCATCCCCTCCTCCTCACCTCCGGCGCGCTCTCCACCTCCC
ACGCCGCCGCCACCTTCCCCTACAACTGCCTCATCCATGCCCACCTCCGCCTCCCCGCTTCCACCGTTGCCCCGCTATGC
GCCCCCCTCCGCCTCTTCTCGTCCATGCTCGCCGCCGGCGCGCGCCCCAACGGCCACACGTTCCCTTCCCTCCTCAGGTC
CGCCTCCGCCTCCGGACCAGCCACCGGGGCCCTCCACTCGCAGTGCCTCCGCCGCGGGCTTACGGCCGATCGCTTCGTTG
CATGCTCGCTCGTTAGCTCCTATGGCCGAGCTGGCCGTCTCGCGTGTGACGCTTCTAAGGTGTTTGATGAAATGGCCAGC
CCGGATCTGTCCTCCTCTAACGCCATGCTTGATGTGCTGTGCCTCGCCGGGGACGTGGCTGTGGCTAGAGAATTCTTTGA
GCGGATGGTGGTGAGGGATGTGGTGTCGTGGACGACGCTCATCTCCGGGTTATCCAGGAATGGGTGCCACTGGGATGCTG
TTGAGGTCTTCAGGGGATTGTTGGTGGACAACAAGGGGCAGCTCGGGGAGGCCACATTGGTCAGCGTGCTATCGGCTTGT
GCAAATTTGGATGGTGCTGAGGGGCTTGCGGTTGGGACAGCTGTTCACGCCTATGTTCTTCGGCATGAGGTTGACCTCAC
AGCGTTCTTGGGCACGGCGTTGATCGACATGTATGGGAAGTATGGGAAGCTCGACTGTTGTAGGAGAGCTTTTCAGATTG
TATGCGAGAAGGAGGTCTGTACGTGGAATGCACTCCTCTCTGCACTGGCTAATCATGGGAAAGAGACTGAAGCACTGGTC
AAGTTCAACATGATGATAGTTGGAGGGTTCTTGCCAAATCAGATTACATTTCTTGCTCTACTGACAGGTTGTGCTCGAGC
AGGATTAGTGGAGATTGGGTTATACTGGTTCGAGACGATGGTGACTGAATACAAGGTGACTCCGATGATGGCCCATTATG
GATGTGTTGTGGACCTGTTAAGCCATGCTGGCCGTTTTATGGAGGCCATTGAGAAGATAGAGCGGATGCCCTTTTTGCCT
GATGCTTCTGTCTGGGGCGCGCTTCTTGGTGCTTGCAAGCTCCATGGAAATGTGGAGCTTGTTGCTGAGATTGGGCGAAA
ACTAGTGGCTCTTGGTCCTCAGCAATCCGACCGGTATGTGACTATCAGAAATATTTATCTAGAAAATGGGAATTGGTGTG
CTGCGACGAGAATGGGTGAGGTGATGCATGAGGCCGGGATCAAGAAGACAGCAGGGCAAAGCAGTGTTGTGTTTCACAGC
TCTGCCATTACTTGA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>chr4D_1_TraesCS4D01G099500
TCACGCTGCAACCATTTGGGATCTTATGCACACAGTCCGGCCGCTGTCTGGCCGTGATCTAATGATTGATACATGTTGGG
AATGGTCACTTAATTTACTTGCTAAATGCAATGACACAGTGCAGGACATGACAATCATGTTGATTTGGCGGATCTGGAGC
ATACTTACAGTTTTTGTTCATGGCAAGGAAGCTCCTCCATAAAAAATTTCTGTTGATTTCCTGCCAAGTTACTTCG----
GTTGCGGCTGTCAAGGATATACAATACTGAGGGAATTATCGAAGGGGAAATGTCTTGCG-AAGATTTGATTCCCTCGCCG
GTGATCAAGGTGTCAACACCTTCCCCTACATGGCCACCACCTCCC-----------------------------------
--------------------------------------------------------------------------------
-----------------------------GTGCATCAGGTGATTCTTTCGGTGGATGGAGCTTTTTTAGTGGGCGATGGT
TCAGCGGCCGCAGGTGTGATCCTACGAAGACATGATGGGAGTGTTATCTTCGCGGCATATTGGGTTTTATTCAACTGTAG
TAATGCTCTAGAGGCTAAGATTCACGCGTTGATGCAAGGCATGGCATTGGCAAAGCAACACTCGGAGGGCCCAATCATTG
TCCAGTTTGATTCATCGACATCACTGGCATCTCTCATAGGTGATTGTTTGGATCGCTTAGCGTATGGTCATTTAGTTGCT
TAGATTAAATTATTGATGCTTGACAAGGAGTTTATT--CTTAAAAAAATTAGTCATGAACAAAATAGGGTAGCAGATT-T
TTGGCTGGTTATAGTAGAACCGAGTGTAATACTATTGCATACCTACACTGTGGACCTCTATGTATGGAGAATCTTTTGCT
ACTT-ACTGTAACCCAAAAAAGGGACAGCCGACAAGTACACATTTTCTGTGATAAATGATGAAGAAAATGTAGTGCTCTG
TTTCTTGGACGTGATGCGATGCATCCAAATCCCAAACGCATGCATATTTGATTTTGCCGCTGGCTTTCCCGTCCAACGCC
GCCGGTCTCCTCTCGCCGGCTTCCGGCTAGCATATGTGGACGGGCACCCCGTACTCCTTCGCCGTCCTCGAACGCCTCCT
CCAGGATCACTTCTCCGCCCCTCGCCGCCTCCTCCAGGTCCATCCCCTCCTCCTCACCTCCGGCGCGCTCTCCACCTCCC
ACGCCGCCGCCACCTTCCCCTACAACTGCCTCATCCATGCCCACCTCCGCCTCCCCGCTTCCACCGTTGCCCCGCTATGC
GCCCCCCTCCGCCTCTTCTCGTCCATGCTCGCCGCCGGCGCGCGCCCCAACGGCCACACGTTCCCTTCCCTCCTCAGGTC
CGCCTCCGCCTCCGGACCAGCCACCGGGGCCCTCCACTCGCAGTGCCTCCGCCGCGGGCTTACGGCCGATCGCTTCGTTG
CATGCTCGCTCGTTAGCTCCTATGGCCGAGCTGGCCGTCTCGCGTGTGACGCTTCTAAGGTGTTTGATGAAATGGCCAGC
CCGGATCTGTCCTCCTCTAACGCCATGCTTGATGTGCTGTGCCTCGCCGGGGACGTGGCTGTGGCTAGAGAATTCTTTGA
GCGGATGGTGGTGAGGGATGTGGTGTCGTGGACGACGCTCATCTCCGGGTTATCCAGGAATGGGTGCCACTGGGATGCTG
TTGAGGTCTTCAGGGGATTGTTGGTGGACAACAAGGGGCAGCTCGGGGAGGCCACATTGGTCAGCGTGCTATCGGCTTGT
GCAAATTTGGATGGTGCTGAGGGGCTTGCGGTTGGGACAGCTGTTCACGCCTATGTTCTTCGGCATGAGGTTGACCTCAC
AGCGTTCTTGGGCACGGCGTTGATCGACATGTATGGGAAGTATGGGAAGCTCGACTGTTGTAGGAGAGCTTTTCAGATTG
TATGCGAGAAGGAGGTCTGTACGTGGAATGCACTCCTCTCTGCACTGGCTAATCATGGGAAAGAGACTGAAGCACTGGTC
AAGTTCAACATGATGATAGTTGGAGGGTTCTTGCCAAATCAGATTACATTTCTTGCTCTACTGACAGGTTGTGCTCGAGC
AGGATTAGTGGAGATTGGGTTATACTGGTTCGAGACGATGGTGACTGAATACAAGGTGACTCCGATGATGGCCCATTATG
GATGTGTTGTGGACCTGTTAAGCCATGCTGGCCGTTTTATGGAGGCCATTGAGAAGATAGAGCGGATGCCCTTTTTGCCT
GATGCTTCTGTCTGGGGCGCGCTTCTTGGTGCTTGCAAGCTCCATGGAAATGTGGAGCTTGTTGCTGAGATTGGGCGAAA
ACTAGTGGCTCTTGGTCCTCAGCAATCCGACCGGTATGTGACTATCAGAAATATTTATCTAGAAAATGGGAATTGGTGTG
CTGCGACGAGAATGGGTGAGGTGATGCATGAGGCCGGGATCAAGAAGACAGCAGGGCAAAGCAGTGTTGTGTTTCACAGC
TCTGCCATTACTTGACTAGAGTTTGTTTGTTGCAAATATTGCTCTTCTGGGACTACCGTTTGTTTCTCATGATTTGTATC
TTTAGGAAAATACTAAACCACATCTTGTTGTTCAA--GCTTATAACAAATATTTGACGTAATGAAGAATCAAATTTTTAT
TCACTGCATTGTGCGG--GTCACCTTTGATTTGCAAGGTTGCAAAAAGGCAGTATCAGGAAAAGCACAGAATTGTACTGG
CATGTCCAC---TCAAAACCTATAAAATTTTGTTTGCACCAAAGTAGTGTATTTGATTATACCACTGGTAAAACAAAAAG
ATTCTTTGCAAGAGGTTTGACTGAATGAAAAATTCCTATTAAATGTTCTGCAATTGATTTCTTAGAAAAAAATAT----G
GATTCATCATACAAATCAAACAACCAATATAGGAAAATTTTCTAAGATCTTTTAAATCAAAGAGTCCCTAACAGTGATGA
CAAAAAGATTGTCCAGTTTAACCAAAAG--AGAAAGAAAACCAAGCAGCCAAGGTGATATGCGTGCAGTTCTCCATTGTT
TAGCTCCGATCCCTAAGGGCATCTCCAATGTTGTCCATCAAAATGCCGCTAACCATTCGGGCGTGTGGTCCGGACACTTT
GTGTCATCTACCGCCGTATGTCAAATGTCCACAGACCAGTCTGCACGTTTGAATTCCTGCGAACCGGAAGTAAAGCTGGC
GGAGCTTTGCAGATGTCCGAACAGCCGCCGCGTAGGTGTCTGGCACTCAGGACCCGGCCAAAACCCC-ACCCAGAGTCCC
GCTTTTATCTCTCCGTCCCTTCC-CCTTTCTCTCTATCTGCATAGTCTGAGACCGATGTCACCACTACACCAACCACTCA
GCCCTCCAGGCCTTGCCAGACCTTCGCCGCTCCCTGGATGTAGACTAATCACATGTCTCGAAGCTATGGTCAAGTTTGCT
ACTGGGGTGCATGGTCAAGGTATTTGAACCAGAGTACTTGAGAGAACCAACTGCTGAAGACATGCATAAC
>chr7D_81
--------------------------------------------------------------------------------
AATGGTTACTTAATTTACTTGGTAGATGCAACGACACAGTGTGGGATAGGATAATCATGTTGATTTGGCGGATCCGGAGC
ATACGTATAGATTTTGTTCATGGCAAGGAAGCTCCTCCACCAGGAATTTCTATTGATTTCCTGCAAAGTTACTTCACTTC
ATTGCGGCTGTCAAGGGTATACACTACTGAGGAAATTATCAAAGAGAAAATGTCTTGTG-AAGATTTGATTCCCTCGCCG
GTGATCAAGGTGTCAACACCTTCCCCTCCATGGCCACCACCTCCCTGTTAGACTGTATAAAATACACAGCCTCTGTACAA
GTCTTGTAGTCTGTATTGTACACTTCCGTGTACCCCTTATATATATATGAGATAGTCACACCTGTTAAGGGTGTTGAGCA
GTTTCCCAAACCCTAAGTTTAACACTCCCGTGGATCAGGTGGCTCTTTCGGTGAATGGAGCTTTTTCAGTCGGCGATGGT
TCGACGGCCGCAG-TACGATCTTACGGAGACAGGATGGGAGTGTTATCTTCACGGCATACCGGGTTTTATTCAACTGTAA
TGATGCTCTAGAGGCTGAGATTCATGTGTTGATGCAAGGCATGGCATTGGCAAAGTAACACTCGGAGGGCCCAATCATTG
TGCAGTCGGATTCATCGACAACACT-GCATCTCTAATGGGTGATTGTTTCGATCGCTCAGCGTATGGTCATTTAGTTGCT
GAGATTAAATTCTTGATGCTTGAGAGGGAGTTTATT--CC--AAAAAATTAGTCGTGAACAAAATAGGGTAGCAGATCGT
TTGGCTGGTTATAGTCGAACTGAGTGTAATACTATTGTATGGCTACACCGTGGACCTTCATGTATTGAGGATCTTTTGCT
ACTTGATTGTAACCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>chr6A_166
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TACATATTTTGTTCATGGTAAGGAAGCTCCTCCACCAGAAATTTCTGTTGATTTTCTGCAAAATTACTTCACTTC
GTTGCGGCTATCAAGGGTAGACACTAGTAATGAAATTATTAAAGGGAAAATGTCTTGCGAAAGATTTGATTCCCTCGCCG
GTGATCAAGGTGTCAACTCCTTCCCCTCCATGGCCACCACCTCCC-----------------------------------
--------------------------------------------------------------------------------
-----------------------------GTGGACCAGGTGGCTCTTTCGGTGGATGGAGCTTTTTCAGCCGGCGATGGT
TCGGCGGCCGCAGGTATGATCCTAAGAAGACTGGATGGGAGTGTTATGTTTGCAGCATACCGGGTTTTATTCAACTGTAA
TGATGCTCTGGAGGCTGAGATTCATGCGTTGATGCAAGGCATGGCATTGGCAAAGCAACACTCGGAGGGCTCAATCATTG
TGCAGTCTGATTCATTGACAGCACTGGCATCTCTCATGGGTGATTGTTTGGATCGCTCACTGTATGGTCATTTAGTTGCT
GAGATTAAATTCTTGATGCTTGACAGGGAGTTTATTCTCT--AAAAAAATAGTCATGAACAAAATAGGGTAGCAGATCGT
TTGGCTGGTTATAATTGAACTAAGTGTAGTACTGCTGTGTGGCTACACCGTGGACCTTCATGTATTGAGGATCTTTTGCT
ACTTGACTGTAACCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr6D_231
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ACTTC
GTTGCGGCTATCAAGGGTAGACACTACTAATGAAATTATTAAAGGGAAAATGTCTTGCG-AAGATTTGATTCCCTCACAG
GTGATCAAGGTGTCAACTCCTTCCCCTCCATGGCCACCACCTCTC-----------------------------------
--------------------------------------------------------------------------------
-----------------------------GTGGATCAGGTGGCTCTTTTGGTGGATGGAGCTTTTTCAGCCGGCGATGGT
TCGGCGGCCGCAGGTATGATCCTAAGGAGACAGGATGGGAGTGTTATCTTTGCAGCATACCGGGTTTTATTCAACTGTAA
TGATGCTCTGGAGGCTGAGATTCATGCGTTGATGCAAGGCATGGCATTGGCAAAGCAACACTCGGAGGGCTCAATCATTG
GGCTGTCTGATTCATCGACAGCACTGGCATCTCTCATGGGTGATTGTTTGGATCGCTCACCAATTGGTCATTTACTTGCT
GAGATTAAATTCTTGATGCTTGACAGGGAGTTTATTCCCC--AAAAAATTAGTCGTGAACAAAATAAGGTAGAAGATCGT
TTGGCTGGTTATAATCGAACTAAGTGTAGTACTGCTGTATGGCTACATCGTGGACCTCCATGTATTGAGGATCTTTTGCT
ACTTGACTGTAACCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr4D_933
ATTTGAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TTTTACCGCCGGCTTTCCCTTCCTACGCC
GCCGGCCTCCTCTCGCCGGCTTCCGGCTAGCATATGTGGACGGGCTCCCCGTACTCCTTCGCCGTCCTCGAACGCCTCCT
CCAAGATCACTTCTCCGCCCCTCGCCGCCTCCTCCAGGTCCATGCCCTCCTCCTCACCTCCGGCGCGCTCTCCACCTCCC
ACGCCGCCGCCACCTTCCCCTACAATTGCCTCATCCATGCCCACCTCCGCCTCCCCGCTTCCACCATTACCCCGCTATGC
GCCCCCCTCCGCCTCTTCTCGGCCATGCTCGCCGCTGGCGCGCGCCCCAACGGCCACACGTTCCCTTCCCTCCTCAGGTC
CGCCTCCGCCTCCGGACCAGCCACCAGGGCTCTCCACACGCAGTGCCTCCGCCGCGGGCTTACGGCCGATCGCTTCGTTG
CATGCTCGCTCGTCAGCTCCTATGGCCAAGCTGGCCGTCTCGCGTGTGACGCTTCTAAGGTGTTTGATGAAATGGCCAGC
CCGGATCTGGCCTCCTCTAACGCCATGCTTGATGTGCTGTGCCTCGCCGGGGACGTGGCTGCGGCTAGAGAATTCTTTGA
GCGGATGGTGGTGAGGGATGTGGTGTCATGGACGACACTCATCTCTGGGTCATCGAGGAATGGGTGCCACTGGGATGCTG
TCGAGATCTTCAGGGGATTTTTGGTACACAACAGGGGACTGCTCGGGGAGGCCACACTGGTCAGCGTGCTCTCGGCTTGT
GCCAACTTGGATGGTGCCGAGGGGCTTGCTGTCGGGACGGCCGTTCACGCGTATGTCATTCGGCATGAGGTTGTCTTCAC
AGCGTTCTTGGGCACGGCATTGATCGACATGTATGGGAAGTATGGGAAGCTTGCCTGTTGCAGGAGAGCTTTTGAGATTG
TATGCGAGAAGGAGGTCTGTACGTGGAATTCACTGCTCTCTGCACTGGCTAATCATGGGAAAGAGACTGAAGCACTGGTT
AAGTTCAACATGATGATAGTTGGAGGGTTCTTGCCGAATCAGATCACATTTCTTGCTCTACTGACAGGTTGTGCTCGAGC
AGGATTGGTGGAGATTGGGTTATACTGGTTCGAGACGATGGTGACTGAATACAAGGTGACTCCGATGATGGCCCATTATG
GATGTGTTGTGGACCTGTTAAGCCGTGCTGGCCGTTTTATGGAGGCCATCGAGAAGATAGAGCGGATGCCCTTTTTGCCT
GATGCTTCTGTGTGGGGCGCGCTTCTTGGTGCTTGCAAGCTCCATGGAAATGTGGAGCTTGTTGCTGAGATTGGGCGAAA
ACTAGTGGCTCTTGGTCCTCAGCAATCCGACCGGTATGTGACTATCAGGAATATTTATCTAGAAAATGGGAATTGGTGTG
CTGCGACGAGAATGGGTGAGGTGATGCATGAGGCCGGGATCAAGAAGACAGCAGGGCAAAGTAGTGTTGTGTTTCACAGC
TCTGCCATTACTTGACTAGAGTTTGTCTGTTGCAAATATTGCTCTTCTGGGACTACCGTTTGTTTCTGATGACTTGTACC
TTTAGGAAAATACTAAACCACATCTTGTTGTTCAA--GCTTATAACAAATATTTGACGTAATGAAGAATCAGATTTTTAT
TCACTGAATCGGGCGG--GTTACCTTTGATTTGCAAGATTGCAAAAAGGCAGTATTAGGAAAATCACAGAATTGTAGTGG
CATGTCTAC---TCAAAATCTATAGAATTTTGTTTGCACCAAAGTAGTGTATTTGATTATACCACTGGTAAAACAAAAAG
ATTCTTTGCAAGAGGTTTGAGTGAATGAAAAATCCCTA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr4B_933
ATTTGAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TTTTACCGCCGGCTTTCCCTTCCTACGCC
GCCGGCTTCCTCTCGCCGGCTTCCGGCTAGCATATGTGGACGGGCTCCCCGTACTCCTTCGCCGTCCTCGAACGCCTCCT
CCAGGATCACTTCTCCGCCCCTCGCCGCCTCCTCCAGGTCCATGCCCTCCTCCTCACCTCCGGCGCGCTCTCCACCTCCC
ACGCCGCCGCCACCTTCCCCTACAACTGCCTCATCCATGCCCACCTCCGCCTCCCCGCTTCCACCGTTACCCCGCTATGC
GCCCCCCTCCGCCTCTTCTCGGCCATGCTCGCCGCCGGAGCGCGCCCCAACAGCCACACGTTCCCTTCCCTCCTCAGGTC
CGCCTCCGCCTCCGGACCAGCCACCACGGCTCTCCACGCGCAGTGCCTCCGCCGCGGGCTTACGGCCGATCGCTTCGTTG
CATGCTCGCTCGTCAGCTCCTATGGCCGAGCTGGCCGTCTCGCGCGTGACGCTTCTAAGGTGTTCGACGAAATGGCCAGC
CCGGATCTGGCCTCCTCTAACGCCATGCTTGATGTGCTGTGCCTTGCCGGGGACGTGGCTGCGGCTAGAGAGTTCTTTGA
GCGGATGGTGGTGAGGGATGTGGTGTCATGGACGACACTCATCTCTGGGTTATCGAGGAATGGGTGCCACTGGGATGCTG
TCGAGGCCTTCAGGGGATTTTTGGTACACAACAGGGGACTGCTCGCGGAGGCCACGTTGGTCAGCGTGCTCTCAGCTTGT
GCAAACTTGGATGGTGCCGAGGGGCTTGCGGTCGGAATGGCCGTTCACGCTTATGTCGTTCGCCATGAGGTTGACCTCAC
AGCGTTCTTGGGCACGGCGTTGATCGACATGTATGGGAAGTACGGGAAGCTTGACTGTTGCAGGAGAGCCTTTCAGATTG
TATGCGAGAAGGAGGTCTGTACGTGGAATGCATTGCTCTCTGCACTGGCTAATCATGGGAAAGAGACTGAAGCACTGGTC
AAGTTCAACATGATGATAGTTGGAGGGTTCTTGCCGAACCAGATCACATTTCTCGCTCTACTGACAGGTTGTGCTCGAGC
AGGATTGGTGGAGATTGGGTTATACTGGTTCGAGACGATGGTGACTGAATACAAGGTGACTCCAATGATGGCCCATTATG
GATGTGTTGTGGACCTGTTAGGCCGTGCTGGCCGCTTTATGGAGGCCATTGAGAGGATAGAGCGGATGCCCTTTCTGCCT
GATGCTTCTGTGTGGGGCGCGCTTCTTGGTGCTTGCAAGCTCCATGGAAATGTGGAGCTTGTTGCTGAGATCGGGCGAAA
ACTAGTGGCTCTTGGTGCTCAGCAATCCGATCGGTTTGTGACTATCAGGAATATTTATCTAGAAAATGGGAATTGGTGTG
CTGCGACGAGAATGGGCGAGGTGATGCATGAGGCCGGGATCAAGAAGACAGCAGGGCAAAGTAGTGTTGTGTTCCACAGC
TCTGCCATTCCTTGACTAGAGTTTGTTTGTCGCAAACATTTCTCTTCTGGGACTACCGTTTGTTTCTCATGACTTGTACC
T-TAGGAAAACACTAAACCACATCTTGTTGTTCAAAAGCTTATAACAAATATTTTACGTAATGAAGAATCAGATTTTAAT
TCACTGCATCGTGCGCCCGTTACCTTTGATTCGCAAGATTGCAAAAAGTCAGTATTAGGAAAAGCACAGAATTGTAGTGG
CATGTGTCGGTGTCAAAACCTATAAAATTTTGTTTGCACCAAAGTAGTGTATTTGATTATACCACTGGTAAAATAAAAAG
ATTCTTTGCAAGAGGTTTGAGTGAAGGGAAAATTCCTATTAAATGTACCGCAATTGATTTCTTAGAAAAA-TATCCACAG
GATTCATCATGCAAATCAAACAACCAATATAGGGAAAATTTCTAAAATCTTTTAAATCAAAGAGTCCCAC--ACCGATGA
CAAAAATATTGCCCAGTTTAACCAAAAAGAA-AAAGAAATACAAGCAGCCGAGGTGATATGCGTGCAGTTCTCCTTTGTT
TAGCTCCAATCCCTAAGGGCATCTCCAATGTTGTCCATCAAAATGCCGCTAACCATTGGGGCGTGTGGTCCGGACACTTT
GTGCCATCCACCGCCGTACGTCAAACGTGCACAGACCAGTCTGCACGTCTGAATTCCTGCAAACCGGAAGTAAAGTTGGC
GGAGCTTTGCGGATGTCCGAACAGCCACCACGTAGGTGTCTGACACTCTGGACCCAGCCAAAAA-CC-ACCCAGAGCCCT
GCTTTTATCACTCTGTCCCTCCC-CCTTTCTCTCTATCTGCGTAGTCTGAGACCAATGCCGCCGCTACACCAACCACTCA
GCCATCCAGGCCTTGCCGGACCTCTACCGCTCCCTGGATATAGACTAACCACATGTCTCAAAGCCATGGTCAAGTTCGCT
ACCGGGGC----GGTCAAGGTGTTTGAACCGGGGTACTTGAGAGAACCAACTGTCGAAGACA--------
>chr4A_939
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TTTTACCGCCGGCTTTCCCTTCCTACGCC
GCCGGCCTCCTCTCGCCGGCTTCCGGCTAGCATATGTGGACGGGCTCCCCGTACTCCTTCGCCGTCCTCGAACGCCTCCT
CCAAGATCACTTCTCCGCCCCTCGCCGCCTCCTCCAGGTCCATGCCCTCCTCCTCACCTCCGGCGCGCTCTCCACCTCCC
ACGCTGCCGCCACCTTCCCCTACAACTGCCTCATCCATGCCCACCTCCGCCTCCCCGCTTCCACCGTTACCCCGCTATGC
GGCCCCCTCCGCCTCTTCTCGACCATGCTCGCCGCCGGCGCGCGCCCCAACGGCCACACGTTCCCTTCCCTCCTCAGGTC
CGCCTCCGCCTCCGGACCAGCCACCAGGGCCCTCCACGCGCAGTGCCTCCGCCGCGGGCTTACGGCCGACCGCTTCGTTG
CATGCTCGCTCGTCAGCTCCTATGGCCGAGCTGGCCGTCTCGCGCATGACGCTTCTAAGGTGTTTGACGAAATGGCCAGC
CCGGATCTCGCCTCCTCTAACGCCATGCTTGATGTGCTGTGTCTCGCTGGGGACGTGGCTGCGGCTAGAGTGTTCTTTGA
GCGGATGGTGGTGAGGGATGTGGTATCATGGACGACGCTCATCTCTGGGTTATCGAGGAATGGGTGCCACTGGGATGCTG
TCGAGATCTTCAGGGGATTTTTGGTGGACAACAGGGGACTGCTCGGTGAGGCCACGTTGGTCAGCGTGCTCTCGGCTTGT
GCAAACTTGGATGGTGCTGAGGGGCTTGTGGTCGGGACGGCTGTTCACGCTTATGTCGTTCGCCATGAGGTTGACCTCAC
AGCGTTCTTGGGCACGGCGTTGATCGACATGTATGGGAAGTATGGGAAGCTTGACTGTTGTAGGAGAGCTTTTCATGCTG
TATCTGAGAAGGAGGTCTGTACGTGGAATGCGCTGCTGTCTGCACTGGCTAATCATGGGAAAGAGACTGAAGCACTGGTT
AAGCTCAACATGATGATAGTTGGAGGGTTCTTGCCAAATCAGATTACATTTCTTGCTCTACTGACAGGTTGTGCTCGAGC
AGGATTGGTGGAGATTGGGTTATACTGGTTCGAGACGATGGTGACTGAATACAAGGTGACTCCGATGATGGCCCATTTTG
GATGTGTTGTGGACCTGTTAGGCCGTGCTGGCCGTTTCATGGAGGCCATTGAGAGGATAGAGCGGATGCCCTTTTTGCCT
GATGCTTCTGTGTGGGGCGCGCTTCTTGGTGCTTGCAAGCTCCATGGAAATGTGGAGCTTGTTGCTGAGATTGGGCGAAA
TCTAGTGGCTCTTGGTCCTCAGCAATCCGACCGGTATGTGACTATCAGGAATATTTATCTAGAAAATGGGAATTGGTGTG
CTGCGACGAGAATGGGTGAGGTGATGCATGACGCCGGGATCAAGAAGACAGCAGGACAAAGTAGTGTTGTGTTTGACAGC
TCTGCCATTACTTGACTAGAGTTTGTTTGTTGCAAATATTGCTCTTCTGGGACTACCGTTTGTTTCTCATGACTTGTACC
CTTAGGAAAATACTAACCCACATCTTGT---TCAA--GCTTATAACAAATATTTGACGTAATGAAGAATCAGATTTTTAT
TCACTGAATCGGGCGG--GTTACCTTTGATTTGCAAGATTGCAAAAAGGCAGTATTAGGAAAATCACAGAATTGTAGTGG
CATGTCCAC---TCAAAACCTATA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr4D_2753
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------TTCCTATTAAATGTACTGCAATTGATTTCTTAGAAAAAATATCCATAG
GATTCATCATACAAATCAAAAAACGAATATAGGAAAATTTTCTAAAATCTTTTAAATCAAAGAGTCCCTAAAACTGATTA
TAAAAAGATTGTCTAGTTTAACAAAAAG--A-AAAGAAATCCAAGCAGATAGGGTGATATGCGTGCAGTTCTCCATTGTT
TAGCTCCAATCCCTATGGGCATCTCAAACATTGTCCATCAAAATGCCGCTAGCCATTCGGGCGTTTGGTT-GGACCCTTT
GTGTGATCCATCGTCATACGTCAAACGCCCATAGACCAGTCTGCATGTTTGAATTCCCGCAAACTGGAAGCAAAGCTGGC
AGAGCTTCGTGGATGTCCGAACAGCCGCCACGTAGGTGTCTAACACTCCGGATCCAGCCAAAAA-CCCACCCAGAGCCCT
GCTTTTCTCACTCCGTCCCTTCCTCCTTCCTCTCTATCTGCATAGTCTGAGACCGATGTCGTCGCTGCACCAGCCACTTT
GCCATCCATGCCTTGCCGGACCTCCGCCGCTCCCTGGACGTAGACCAACCACATGTCTCGAAGCCATCGTCAAGTTTGCT
ACTGGGGT----GGTCAAGGTGTTTGGACCAAAGTAATTGACAGAACCAACTGCCGAAGACA--------
>SNPs
SSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
------S--------------S--S------S---------SS---S-S--S----------------------S-----
----S-----S----------------------------SS-S---------------------S----------S----
----------------S------S--------S-------S-----S---------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S--------SS-----------------------S---S---------
--S------------S----------------S--------------------------SS------------------S
-S--------------S-------S-------------------------------------------------------
-S----S-------------S----------------S-------------------S----------------------
S----------S-------------S--------------SS-----------------------------------S--
---------------S----S----------------S--SS------S---------S------S---S----------
---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S----S---------S---S-----
-----S---------------------------------------S----------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------S-----------
---------------------S----------------------------------------------------------
-------------------------S-----------S------------------------------------------
-------------S------------------------------------------------------------------
---------S---------------------------------------------------S------------------
---------------------------S-----------------S--------S-------------------------
-S-----------------S-------------S---S-S------------------------------S---------
-----S--------------------------S-----S-----------S-----SS----------------------
---------------------------------------------------S----------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
------------------------S-------------------------------------------------------
-----------S--------------------------------------------------------------------
------------------------------------------------S-------------------------------
-------------------------------------------------------------S------------------
------------------------------------------------------------------------S-----S-
-----------------------------------------------------------------------S--------
---------S----------S----------------S-----------------S--------------------S---
--------------------------------------------------------------------------------
--------------------S-------------------------S------------------------SSSS-----
---------------------------------------------S-------------------------S-S------
-------------------------------S-------S----------------------------------------
-------S------------------------------------------------------------------------
--------S---------S------S----------------------------------S-------------------
----------S------------------S------------S-----S------S-------SS-----------S--S
---------S--------------------------------------------------S--S----------------
---S-------------S-----S------------------------S---------------S---------------
--------SSSS---------S--------------------------------S-------SSSSSSSS
>forward_1002
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GGACAGCCGACAAGTACACA--------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>reverse_1898
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------CTTCGGCATGAGGTTGACCT---
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>forward_1084
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------CCAAATCCCAAACGCATGCA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_3080
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------ACCAAGCAGCCAAGGTGATA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
