>input_sequence_52032
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----------------------------------------------------------ATGCAGAGCACCGTCGTGCTTT
ACACATGGATGGTCAGGGGCCACCTCCATCCCATGACACAGTTCGCCCACCATCTCACCGCACATGGCGTTCCTGTCACC
GTCGCCGTCGCCGACGTCCCGTCTACAGGCAAGTCCTCTGAGACCATTGCCGGCCTCGCCGCATCCTATCCTTCCGTCTC
CTTCCACCTACTACCGCCGTCAGCGACCCGTTCCGCCCAGACGGCTGACCCCGATGCCGATCCATTCATCGCCCTTGTCG
CTGACCTCCGCGCCACCAACTCCGCCCTCCTCGCCTTCCTGAGGTCCCTCCCGTCCGTCAAGGCTCTAGTCACCGACTTC
TTCTGCGCCTACGGGTTTGATGCCGCCGCAGAGCTCGGCGTCCCGGCCTACCTTTTCTTCACCTCCGCTGCGTCGGTCCT
TGCTGCCTACCTGCACATCAACGTCATGCGCTCCACTGTCTCCTTCCGGGACATGGGGCGCTCCCTGCTGCACTTCCCCG
GAGTCCACCCAATTCCGGCGTCCGACTTGCCGGAAGTGCTGCTCGACCGCGGCGACAGCCAGTACAAGACAATCCTTAGC
CTTATGGAGCAGGTGCCAAGATCTAAGGGCATTCTGTCGAACACGTTCAAGTGGCTGGAGCCCCGCGCCGTCAAGGCGAT
AAAAGACGGGACTCCCCGTCCCGGCGAGTCAGTACCGAAACTGTTCTGCGTCGGTCCATTGGTCGGCGAGGAGCGGGGAA
GCACCGTGAAGCACGAATGCCTGAGATGGCTAGACAAGCAGCCAGCGCGGAGCGTGGTATTCCTCTGCTTCGGGAGCGCG
AGCTCGGTGCCCGCAGAGCAGTTAAAGGAGATCGCCGTGGGACTGGAGAAGAGCGGGCACGCCTTCTTATGGGCCGTGCG
AGCACCCGTTGCGCCGGACGCCGACGCAACGAAGCGGTTCGAGGGACGGGCCGAGGCGGCGGTGGAGCCGCTGCTGCCGG
AGGGATTCTTGGACAGGACGAGGGGACGCGGGATGGTGGTTTCTTCCTGGGCGCCGCAAGTGGAGGTGCTCCGGCACCCG
GCGACCGGCGCGTTCGTGACGCACTGCGGATGGAACTCGACGCTTGAGGCTGTTGTCGCCGGGGTGCCGATGCTGTGCTG
GCCCATGTACGCGGAGCAGGGGATGAACAAGGTGTTGGTGGTGGAGGACATGAAGCTTGGGGTGGCCATGGACGGCTACG
ACGAGGCGACCGTGAAATCTAGGGAGGTAGAGGCGAAAGTGAGGCTGGTCATGGAGTCCGAGCATGGGAAGCAGATCAGG
GAGAGGATGGCGATAGCGAAAGTGATTGCAGCCGATGCGCTGGAGACCGGTGGGTCCTCAGCGGCAGCATTTGTTGACTT
CCTGGATGATCTCAAGATTTCCATGCTAGATGTTATTTAA----------------------------------------
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>chr3D_1_TraesCS3D01G279500
AATCT-ATGTGTGTCTTTTAGGAAGGTGATCTTACATATATGGTGTGATTTTTAAATTCTTAATCACTTATTATTTATGT
GATTGAATTGAATTAGCACCTGCCTAAACAAGCACGATACAAGATCTCCATAATGAGATTTGGTTTTTTAATGTGAAAGA
GAAAAAACCAATGGGATGGGGAAGTGAGAGGTGAAACAAAAATATACTATACCAGGCTACCAACTCCCCCTTTAGGAGTA
GAGATATATACATGTGGTTTGGTAGGATGAGAAAATGTGTATATTATTTGGTAAGATAAGAAAAAAGATATGTTGTTTTT
GTTGTATTAGAAAAGTTGTGATTGTCATTTAATAGTAGAGATAGCGATATCAATAAATGGCAGCACATTGAGAAGTATCT
TATTTTGTTTTGAAATGTTATAAAAAAAGTCTTATTTATGTTTTTTGGGTAGGTCATCTCATATATATGCTGTGATTTCT
GAATTTTTAATTACCTATTATTTACTTGATTGAATTGAATTACCACCTTACAAAGTAAGCACGAAATAAGATCTTTCCCT
TTGATGGGATTTGGTTCTTTAATGAGA--GAGAAAATAAACCAATGGGATGGGATCGCGCGGCGATTAAAAATCAAAGAA
ATAAAACTGTGGAGGCGAAACTCTCAAGTCTCCTTCAGGCAAGTCCTCTAAAACCATTGCCGACATTAATAGTTAACCAA
AAACATATCAATCTACCATCACGACCGCAGACTCCTTTACTTTTTTAAAATAAGTAAATATAAATATGCTAACTTTACAG
CTGAAACCATTGCCAGCATTACTGGTTGCATGCGAAACCAAACTAAATCAAACAACGTATCAATCTACCATGACCGCAGA
CTCAAATAT-------------GCTGGTAGTCGCAGGCGGCTACGAAACATCGCCCGTATAT--ATAACACACCCGATCG
ATTGCCAGCTTCTCTCCTTCAGAGTTCAGAACACTGCCACTGAAACACAGAAGCAAATATGCAGAGCACCGTCGTGCTTT
ACACATGGATGGTCAGGGGCCACCTCCATCCCATGACACAGTTCGCCCACCATCTCACCGCACATGGCGTTCCTGTCACC
GTCGCCGTCGCCGACGTCCCGTCTACAGGCAAGTCCTCTGAGACCATTGCCGGCCTCGCCGCATCCTATCCTTCCGTCTC
CTTCCACCTACTACCGCCGTCAGCGACCCGTTCCGCCCAGACGGCTGACCCCGATGCCGATCCATTCATCGCCCTTGTCG
CTGACCTCCGCGCCACCAACTCCGCCCTCCTCGCCTTCCTGAGGTCCCTCCCGTCCGTCAAGGCTCTAGTCACCGACTTC
TTCTGCGCCTACGGGTTTGATGCCGCCGCAGAGCTCGGCGTCCCGGCCTACCTTTTCTTCACCTCCGCTGCGTCGGTCCT
TGCTGCCTACCTGCACATCAACGTCATGCGCTCCACTGTCTCCTTCCGGGACATGGGGCGCTCCCTGCTGCACTTCCCCG
GAGTCCACCCAATTCCGGCGTCCGACTTGCCGGAAGTGCTGCTCGACCGCGGCGACAGCCAGTACAAGACAATCCTTAGC
CTTATGGAGCAGGTGCCAAGATCTAAGGGCATTCTGTCGAACACGTTCAAGTGGCTGGAGCCCCGCGCCGTCAAGGCGAT
AAAAGACGGGACTCCCCGTCCCGGCGAGTCAGTACCGAAACTGTTCTGCGTCGGTCCATTGGTCGGCGAGGAGCGGGGAA
GCACCGTGAAGCACGAATGCCTGAGATGGCTAGACAAGCAGCCAGCGCGGAGCGTGGTATTCCTCTGCTTCGGGAGCGCG
AGCTCGGTGCCCGCAGAGCAGTTAAAGGAGATCGCCGTGGGACTGGAGAAGAGCGGGCACGCCTTCTTATGGGCCGTGCG
AGCACCCGTTGCGCCGGACGCCGACGCAACGAAGCGGTTCGAGGGACGGGCCGAGGCGGCGGTGGAGCCGCTGCTGCCGG
AGGGATTCTTGGACAGGACGAGGGGACGCGGGATGGTGGTTTCTTCCTGGGCGCCGCAAGTGGAGGTGCTCCGGCACCCG
GCGACCGGCGCGTTCGTGACGCACTGCGGATGGAACTCGACGCTTGAGGCTGTTGTCGCCGGGGTGCCGATGCTGTGCTG
GCCCATGTACGCGGAGCAGGGGATGAACAAGGTGTTGGTGGTGGAGGACATGAAGCTTGGGGTGGCCATGGACGGCTACG
ACGAGGCGACCGTGAAATCTAGGGAGGTAGAGGCGAAAGTGAGGCTGGTCATGGAGTCCGAGCATGGGAAGCAGATCAGG
GAGAGGATGGCGATAGCGAAAGTGATTGCAGCCGATGCGCTGGAGACCGGTGGGTCCTCAGCGGCAGCATTTGTTGACTT
CCTGGATGATCTCAAGATTTCCATGCTAGATGTTATTTAACCTTTAGTGTTCGCCTTGTTCAGCTTGGTGGAATTTGTTT
TCTAAATGTTTAAAAACATCCGGCTGATTACAGCGCGGTGTAAACCTCCTCCAATGCGCGCCACGCCTCCAGTACAGAGC
CACCACCGCTTTTGCTTTTCACTTAGAGCATGGGTAATAATATGCTCCCTTCGTGTTAAAATAGACTCGACTCAACTTTG
TACTAACTTAATTTTAAGTATAAAGTTAATATAAAATTGAGTCATCTATTTTGAAATGGAGAGTAGAAAAGTGTTAAAAA
CATCCGACTGATTTCTGAAGAAATCAACCACGTGGCTCAAGCGCCATGCGTCCATTAGGCCATGCACCATCTATCACACC
CTTCCTTGTCTTCTTTCTTAGAATCACTTTCTCCCTTATCTTCAACCGGTCACGGAGAGCCACTCGTTCTCTTCACTTCT
TTGTCTCCTACCTCTGCTTCTCTCATATCCCGTTGTTTTTCTCTCGCCTCTCCCTTGCAGGCTGGCCGACAACTATTGGA
GCCGCCACTCGCCGCACCCTGTTGCTGCAAGGAAGCCACCATCGCACCGCTACTGCTGCAAGTTTCTTCTCTCACTTCCT
CTCGCTTCTCTCCTCTGCAGCCTCAAACACACCGACGCATCATCATCTTAACGCATGCTCATGATGCTCCAAATCGGCGG
CCGGCTCTGCAACCGCAAGGGTTATTCGTCGGCGGTATGGCATGACTGGCCGAGGATTCCACAAGCTCAATGAAGCCCTG
CTCACCCTGCTTCCCAAGAAGCCGGACGCGTCTACACTCTCCCACTATAGACTCTCGTGGCCAAGCTCTTCGCAAAAGTC
ATCTCTCTCCGCTTGGCGCCTCGGATGGGACAGATCGTCTCCGTCAACCAAAGTGCTTTCATCGCCGGGCGCAGCGTGCA
CGACAACTTTCTTCCAGTCCAGCAAACGACGCGCTTATTGCACAACCTCAAGGCCCCAGAATCATGCTCAAGCTGGACAT
>chr3B_1
AATCCTATGTGTGTCTTTTAGGAAGGTGATCTCACATATATGGTGCGATTTCTGAATTCTTAATCACTTATTATTTATGT
GATTGAATTTAATTAGAACCTGCCTAAACAAGCACGAAACAAGATCCCCTTAATGATATTTGGTTTTTTAATGTGAGAGA
GAAAAAACCAATGTGATGAGGTAGTGAGAAGTGAGACAAAAATATACCATACCAGGCGACCAACTCTCCATTTAGGAGTA
GAGATATATACATGTGATTTGGTAAGATGAGAAAATATATAT--TATTCGGCAAGATAAGGAAAAATATATGTTGTTTTT
GTTGCATTAGAAAAGTTGTGATTGTCATTCAATAGTAGAGATATTGGTAACAATAAATGGCGGCATATTGAGGAGTATCT
TA-TTTGTTTTGAAATGTTATAAAAAAA-TCTTATTTGTATTTTTTGGGTAGGTCATCTCATATATATGATGCGATTTCT
GAATTCTGAAATACCTATTATTTACATGATTGAATTGAATTACCACCTGACAAAGTAAGCACGAAATAAGATCTTTTCCT
TTGATGGAATTTGGTTGTTTGATGAGAGGGAGAAAATAAACCACTGAAATGGGATGGCCAGGCGATTAAAAATCAAAGAA
ATAAAACCGTGGAGGCGAAATTCTCAAGTCTCCCTCAGGCAAGTCCTCTAAAAACATT----------------------
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>chr3A_775
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---------------------------------------------------------ATATAAATATGCTAACTTGGCAG
CTGAAACCATTGCTGGCGTTAATAGTTGCATGCGAAACCAAACTAAATCAAACAACGTATCAACCTACCATGACCACACA
CTCAAATATGCCTAACTTTACAGCTGGTAGTCGCAGGCGGCTACGAAACATCGCCAGTACAT--ATAACACAACCGATCA
ATTGCCAGCTTCCCTCCTTCAGAGTTCAGAACACTGCCACTGAAACACAGAAGCAAATATGCAGAGCACCGTCGTGCTTT
ACACATGGATGGTCAGGGGCCACCTCCACCCCATGACACAGTTCGCCCACCATCTCGCCGCACATGGCGTTCCTGTCACC
GTCGCCGTCGCCGACGTCCCGTCTATAGGCAAGTCCTCTGAGACCATTGCCGGCCTCGCCGCATCCTATCCTTCCGTCTC
CTTCCACCTACTCCCGCCGTCGGCGACCCGTTCCGCCCAGACGGCTGACCCCGATGCCGATCCATTCATCGCCCTTGTCG
CCGACCTCCGCGCCACCAACTCTGCCCTCCTCGCCTTCCTGAGGCCCCTCCCGTCCCTCAAGGCTCTAGTCACCGACTTC
TTCTGCGCCTACGGGTTTGATGCCGCCGCAGAGCTCGGCGTCCCGGCCTACCTTTTCTTCACCTCCGCTGCGTCGGTCCT
TGCTGCCTACCTGCACATCCCCGTCATGCGCTCCACTGTCTCCTTCCGGGACATGGGGCGCTCCCTGCTGCACTTCCCCG
GAGTCCACCCAATTCCGGCGTCTGACTTGCCGGAAGTGCTGCTCGACCGCGGCGACAGCCAGTACAAGACAATCCTTAGC
CTTATGGAGCAGCTGCCAAGATCTAAGGGCATTCTGTCGAACACGTTCGAGTGGCTGGAGCCCCGCGCCGTCAAGGCGAT
AAAAGACGGGACTCCCTGTCCCGGCGAGTCAGTACCGAAACTGTTCTGCGTCGGTCCATTGGTCGGCGAGGAGAGGGGAA
GCGCCGTGAAGCACGAATGCCTGAGATGGCTAGACAAGCAGCCAGCGCGGAGCGTGGTATTCCTCTGCTTCGGGAGCGCG
AGCTCGGTGCCCGCAGAGCAGTTAAAGGAGATCGCCGTGGGACTGGAGAAGAGCGGGCACGCGTTCTTATGGGCCGTGCG
AGCGCCCGTTGCGCCGGACGCCGACGCGACGAAGCGGTTCGAGGGGCGGGCCGAGGCGGCGGTGGAGCCGCTGCTGCCGG
AGGGATTCTTGGACAGGACGAGGGGACGCGGGATGGTGGTTTCCTCCTGGGCGCCGCAAGTGGAGGTGCTCCGGCACCCG
GCGACCGGCGCGTTCGTGACGCATTGCGGATGGAACTCGACGCTAGAGGGTGTTGTAGCCGGGGTGCCGATGCTGTGCTG
GCCCATGTACGCGGAGCAGAGGATGAACAAGGTGTTCGTCGTGGAGGAGATGAAACTCGGGGTGGCCATGAGCGGCTACG
ACGAGGGGATAGTTAAAGCGGATGAGGTAGAGGGGAAGGTGAGACTGATCATGGAGTCCGAGCAAGGGGAGGAGATCAGG
GAACGGATGACGATGGCACAAGTGATTGCTGCCAATGCGCTGGAAAGCGGTGGATCTTCGGCGGCAGCATTTGTTGACTT
CGTGGATAATCTGAAGATTTCGAT--------------------------------------------------------
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>chr3B_887
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----------------------GCTGGTAGTCGCAGGCGGCTACGAAACATCGCCAGTACATGTATAACACAACCGATCG
ATTGCCAGCTTCCCTCCTTCAGAGTTCAGAACACTGCCACTGAAACACAGAAGCAAATATGCAGAGCACCGTTGTGCTTT
ACACATGGATGGTGAGGGGCCACCTCCACCCCATGACACAGTTCGCCCACCATCTCGCCGCACATGGCGTTCCTGTCACC
GTCGCCGTCGCCGACGTCCCGTCTACAGGCAAGTCCTCTGAGACCATTGCCGGCCTCGCCGCATCCTATCCTTCCGTCTC
CTTCCACCTACTCCCGCCGTCAGCGACCCGTTCCGCCCAGACGGCTGACCCCGATGCCGATCCATTCATCGCCCTTGTCG
CCGACCTCCGCGCCACCAACTCTGCCCTCCTCGCCTTCCTGAGGTCCCTCCCCTCCATCAAGGCTCTAATCACCGACTTC
TTCTGCGCCTACGGGTTTGATGCCGCCGCAGAGCTCCGCGTCCCGGCCTACCTTTTCTTCACCTCCGCTGCGTCGGTCCT
TGCTGCCTACCTGCACATCCCCGTCATGCGCTCCACTCTCTCCTTCCGGGACATGGGGCGCAACCTGCTGCACTTCCCCG
GAGTCCACCCAATTCCGGCGTCCGACTTGCCGGAAGTGCTGCTCGACCGCGGCGACAGCCAGTACAAGGCAATCCTTAGC
CTTATGGAGCAGCTGCCAAGATCTAAGGGCATTCTGTCTAACACGTTCGAGTGGTTGGAGTCCCGCGCCGTTAAGGCGAT
AAAAGACGGGACTCCCCGTCCCGGCGAGTCAGTACCGGCATTGTACTGCGTCGGTCCATCGGTCGGCGAGGAGAGGGGAA
GCACCGTGAAGCACGAATGCCTAAGATGGCTAGACAAGCAGCCAGCGCGGAGCGTGGTATTCCTCTGCTTCGGGAGCGCG
AGCTCGGTGCCCGCAGAGCAGTTAAAGGAGATCGCCGTGGGACTGGAGAAGAGCGGGCACGCGTTCTTATGGGCCGTGCG
AGCACCCGTTGCACCGGACGCCGACGCGACGAAGCGGTTCGAGAGGCGGGCCGAGGCGGCGGTGGAGCCGCTGCTGCCGG
AGGGATTCTTGAACAGGACGAGGGGACGCGGGATGGTGGTTTCTTCCTGGGCGCCGCAAGTGGAGGTGCTCCGGCACCCG
GCGACCGGCGCGTTCGTGACGCATTGCGGATGGAACTCTACGCTAGAGGCTGTTGTAGCCGGGGTGCCGATGCTGTGCTG
GCCGATGTACGCAGAGCAGAGGATGAACAAGGTGCTCGTCGTGGAGGAGATGAAACTCGGGGTGGCCATGAGCGGCTACG
ACGAGGGGATAGTTAAAGCGGATGAGGTAGAGGGGAAGGTGAAACTGATCATGGAGTCCGAGCAAGGGGAGGAGATCAGG
GAGCGGATGACGATGGCGCAAGAGATTGCTGCCAATGCGCTGGAAAGCGGTGGATCTTCGGCGGCAGCATTTGTTGACTT
CCTGGATAATCTGAAGATTTCGATGCTCGAT-------------------------------------------------
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>chr3D_1007
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----------------------------------------------------------------AGCACCGTCGTGCTGT
ACACATGGATGGTGAGGGGTCACCTCCACCCCATGACGCAGCTCGCGAATCACCTCGCCGGGCATGGCGTTCCCGTCACC
GTCGTCGTCGCCGATGTTCCGTCCACAGGTGACTCCCCACAAACCATTGCCCGCCTCTCTGCCTCCTACCCTGCTGTATC
CTTCCACCTGCTCCCGCCGGCAACAACTCGCTCTGAGGACGCGGCCGATCCCAACGCCGACCCTTTCATCACCCTCATCG
CCGACATCCGCGCCACCAACGCTGCTCTCCTCGCCTTTCTGAGATCTCTCCCGTCTGTGAAGGCTCTCATCACCGACTTT
TTCTGCGCGTACGGGCTTGACGCAGCCGCGGAGCTCGGCGTCCCAGCCTACGTGTTCTTCACCCTTTGCGTGTCGGCTCT
TGCCACCTTCCTGCATATCCCCGTCATGCGCTCCGCCGTCTCCTTCGGGGAGATGGGTCGCTCCTTGCTGCACTTCCCTG
GAGTTCACCCAATTCCGGCGTCCGACTTGCCGGAGGTCCTGCTCGATCGTGACAACAGGCAGTACAGTACCACTCTTGGT
CTCTTCAAGCAGCTTCCCAGAGCGAAGGGCATTTTGTCGAACACGTTCGAGTGGCTGGAGCCCCGCGCCGTGAAGGCGAT
AAAGGAGGGAATTCCCCGCCCCGGCGAGTCACTGCCGAAACTGTTCTGCGTCGGTCCATTGGTCGGCGAGGAGAGAGGGA
GCAACGCGGATCACGACTGCCTAGTGTGGCTGGACAAGCAGCCGGCGGGGAGCGTGGTCTTCGTCTGCTTCGGGAGCGCG
AGCTCGGTGCCGGCGGAGCAGCTAAATGAGATAGCCGTGGGGCTGGAGAAGAGCGATCACGCGTTCCTCTGGGCCGTGCG
CGCGCCTGTCGCGCCGGATGCCGACTCGACGAAGCGGTTCGAGGGGCGGGGTGAGGCGGCGGTGGATGCGCTGCTGCCGG
ATGGATTCTTGGACAGAACACGGGGGCGCGGAATGGTGCTGTCGTCCTGGGCGCCGCAGGTGGAGGTGCTCCGGCACCCG
GCGACTGGAGCGTTTGTGACGCACTGCGGGTGGAACTCCACGCTGGAGGCGGTCATGGCGGGGGTGCCGATGCTGTGCTG
GCCGATGTACGCGGAGCAGAGGATGAACAAGGTGTTCGTCGTGGAGGAGATGAAACTTGGGGTGGCCATGAACGGCTACG
ACGAGGCGATGGTGAAAGCGGAGGAGGTAGAGGCCAAGGTGAGACTGGTCATGGAGTCCGAGCAAGGGAACGAGATCAGG
CAGAGGATGACGAAGGCGCGAGAGATTGCTGCCAATGCACTGGAGATCGGTGGATCCTCGGTGGCAGCAATCGTTGACTT
GCTGGATAATCTGAAGATTTC-----------------------------------------------------------
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>chr3A_1007
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----------------------------------------------------------------AGCACCGTCGTGCTCT
ACACATGGATGGTCAGGGGTCACCTCCACCCCATGACGCAGCTCGCGAATCACCTCGCCGGACATGGCGCTCCCGTCACC
GTCGCCGTCGCCGATGTTCCGTCCACAGGTGACTCCTCACAAACTATTGCCCGCCTCTCTGCCTCCTACCCTGCTGTATG
CTTCCACCTGCTCCCGCCGGCAACAACCCGCTCCGAGGACGCGGCCGATCCCAACGCCGACCCTTTCATCACCCTCATCG
CCGACATCCGCGCCACCAACGCCGCCCTCCTCGCCTTTCTGAGGTCTCTCCCGTCTGTGAAGGCTCTCATCACCGACTTT
TTCTGCGCGTACGGGCTTGACGCAGCCGCAGAGCTCGGTGTCCCAGCCTACGTGTTCTTCACCCTTTGCGTGTCGGCTCT
TGCCACCTTCCTGCATATCCCCGTCATGCGCTCCGCCGTCTCCTTCGGGGAGATGGGGCGCTCCTTGCTGCACTTCCCTG
GAGTTCACCCAATTCCGGCGTCCGACTTGCCGGAGGTCCTGCTCGATCGTGACAACAGGCAGTACAGTACCACTCTTGGT
CTCTTCAAGCAGCTTCCCAGAGCGAAGGGCATTCTGTCGAACACGTTCGAGTGGCTGGAGCCCCGCGCCGTGAAGGCGAT
AAAGGAGGGAATTCCCCGCCCCGGCGAGTCACTGCCGAAACTGTTCTGCGTCGGCCCATTGGTCGGCGAGGAGAGAGGGA
GCAACGCGAATCACGAATGCCTTGTGTGGCTGGACAAGCAGCCGGCGGGGAGCGTGGTGTTCGTCTGCTTCGGGAGCGCG
AGCTCGGTGCCGGCGGAGCAGCTAAATGAGATAGCCGTGGGGCTGGAGAAGAGCGGTCACGCGTTCCTCTGGGCCGTGCG
CGCGCCTGTCGCGCCGGAAGCCGACTCGACGAAGCGGTTCGAGGGGCGGGGTGACGCGGCGGTGGATGCGCTGCTGCCGG
ATGGATTCTTGGACAGAACACGGGGACGCGGAATGGTGCTGTCGTCCTGGGCGCCGCAGGTGGAGGTGCTCCGGCACCCG
GCGACTGGAGCGTTTGTGACGCACTGCGGGTGGAACTCCACGCTGGAGGCGGTCATGGCGGGGGTGCCGATGCTGTGCTG
GCCGATGTACGCGGAGCAGAGGATGAACAAGGTGTTCGTCGTGGAGGAGATGAAACTTGGGGTGGCCTTGAACGGCTACG
ACGAGGCGATGGTGAAAGCGGAGGAGGTAGAGGCGAAGGTGAGACTGGTCATGGAGTCCGAGCAAGGGAACGAGATCAGG
CAGAGGATGACGAAGGCGCAAGAGATTGCTGCCAATGCACTGGAGATCGGTGGATCCTCGGCGGCAGCAATCATTGACTT
GCTGGATAGTCTGAAGATTTC-----------------------------------------------------------
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>chr3B_1007
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----------------------------------------------------------------AGCACCGTCGTGCTCT
ACACATGGATGGTCAGGGGTCACCTCCACCCCATGACGCAGCTCGCGAATCACCTCGCCGGACATGGCGTTCCCGTCACC
GTCGCCGTCGCCGATGTTCCGTCCACAGGTGACTCCTCACAAACCATTGCCCGCCTCTCTGCCTCCTACCCTGCTGTATC
CTTCCACCTGCTCCCGCCGGCAACAACCCGCTCCGAGGACGCGGCCGATCCCAACGCCGACCCTTTTATCACCCTCATCG
CCGACATCCGCGCCACCAACGCCGCTCTCCTGGCCTTTCTGAGATCTCTCCCGTCTGTGAAGGCTCTCATCACCGACTTT
TTCTGCGCGTACGGGCTTGACGCAGCCGCGGAGCTCGGCGTCCCAGCCTACGTGTTCTTCACCCTTTGCGTGTCGGCTCT
TGCCACCTTCCTGCATATCCCCGTCATGCGCTCCGCCGTCTCCTTCGGGGAGATGGGGCGCTCCTTGCTGCACTTCCCTG
GAGTTCATCCAATTCCGGCGTCCGACTTGCCGGAGGTCCTGCTCGATCGTGACAACAGGCAGTACAGTACCACTCTTGGT
CTCTTCAAGCAGCTTCCCAGAGCGAAGGGCATTTTGTCGAACACGTTCGAGTGGCTGGAGCCCCGCGCCGTGAAGGCGAT
AAAGGAGGGAATTCCCCGCCCGGACGAGTCACTGCCGAAACTGTTCTGCGTCGGTCCACTGGTCGGCGAGGAGAGAGGGA
GCAACGCGAATCACGAATGCCTAGTGTGGCTGGACAAGCAGCAGGCGGGGAGCGTGGTCTTCGTCTGCTTCGGGAGCGCG
AGCTCGGTGCCGGCGGAGCAGCTAAATGAGATAGCCGTGGGGCTGGAGAAGAGCGGTCACGCGTTCCTCTGGGCCGTGCG
CGCGCCTGTCTCGCCGGATGCCGACTCGACGAAGCGGTTCGAGGGGCGGGATGAGGCGGCGGTGGATGCGCTGCTGCCGG
ATGGATTCTTGGACAGAACACGGGGACGCGGAATGGTGTTGTCCTCCTGGGCGCCGCAGGTGGAGGTGCTCCGGCACCCG
GCGACTGGAGCGTTTGTGACGCACTGCGGGTGGAACTCCACGCTTGAGGCGGTCATGGCGGGGGTGCCGATGCTGTGTTG
GCCGATGTACGCGGAGCAGAGGATGAACAAGGTGTTCGTCGTGGAGGAGATGAAACTTGGAGTGGCCATGGACGGCTACG
ACGAGGCGATGGTGAAAGCGGAGGAGGTAGAGGCGAAGGTGAGACTGATCATGGAGTCCGAGCAAGGGGACGAGATCAGG
CACAGGATGACGAAGGCGCGAGAGATTGCTGCCAATGCACTGGAGATCGGTGGATCCTCGGCGGCAGCAATCATTGACTT
GCTGGATAATCTGAAGATTTC-----------------------------------------------------------
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>chr3A_1554
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---------------------------------------------------GCGACAGCCAGCACAAGGCAATCCTTAGC
CTTATGGAGCAGCTGCCAAGATCTAAGGGCATTCTCTCGAACACGTTCGAGTGGCTGGAGCCCCGCGCCGTCAAGGCGAT
AAAAGACGGGACTCCCCATCCCGGCGAGTCAGTACCGAAACTGTTCGGCATCGGTCAATTGGTCGGCGAGGAGAGGGGAA
GCACCGTGAAGCATGAATGCCTGAGATGGCTAGACAAGCAGCCAGCGCGGAGCGTGGTATTCCTCTGCTTCGGGAGCGTG
AGCTCGGAGCCCGCAGAGCAGTTAAAGGAGATCGTCGTGGGACTGGAGAAGAGCGGGCACGCGTTCTTATGGGCCGTGCG
AGCGCCCGTTGCGCCGAACACCGACGCGACAAAGCGGTTTGAGGGGCGAGCCGAGGCGGCGGTGGAGCCGCTGCTGCCGG
AGGGATTCTTGGATAGGACAAGGGGACGCGAGATGGTGGTTTCCTCCTGGGCGCCGCAAGTGGAGGTGCTCCGGCACCCG
GCGACCGGCGCGTTCGTGACGCATTGCGGTTGGAACTCGACACTAGAGGCTGTTGTAGCCGGGGTGCCGATGCTGTGCTG
GCCCATGTACGCGGAGCAGAGGATGAACAAGGTGTTCGTCGTGGAGGAGATGAAACTCGGGGTGGCCATGAGCGGCTATG
ACGAGGGGATAGTTAAAGCGGATGAGGTAGAGGGGAAGGTGAGACTGATCATGTATTCCGAGCAAGGGGAGGAGATCAGG
GAACAGATGACGATGGCACAAGAGATTGCTGCCAATGCGCTGGAAAGCGGTGGATCGTC---------------------
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>chr2B_1769
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--------------------------TGGCTGGACGCGCAGCCGGAGCGGAGCGTGGTGTTCCTCTGCTTCGGCAGCTTG
GGCGCGATGTCGGCGGCGCAGCTCAAGGAGATAGCGTGCGGGCTCGAGAACTCCGGCCACCGCTTCATGTGGGTCGTGCG
GAGC---------CCGCCCGAGGACCCGGCCAAATACTTCCTGCCGCGCCCGGAGCCAGACCTGGACGCGCTCCTCCCCG
ATGGGTTCTTGGATAGGACGGCCGCGAGGGGGATGGTCGTGAAGATGTGGGCGCCGCAGGTGGAGGTGCTGCGGCACGCC
GCGACCGGCGCGTTCGTGACGCACTGCGGGTGGAACTCCGTCCTGGAGGCGGCGTCGGCCGGGGTGCCGATGCTGTGCTG
GCCGCAGTACGCGGAGCAGAGGGCGAACAAGGTGTTTGTGGTGGACGAGATGAAGCTCGGGGTGGTGATGGAAGGGTACG
ACGAGGAACTTGTGAAGGCGGAGGAGGTGGAGAAGAAGGTGAGGCTGGTGATGGAGTCGGATGAAGGGGAA---------
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>chr2A_1769
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--------------------------TGGCTGGACGAGCAGCCGGAGCGGAGCGTGGTGTTCCTCTGCTTCGGCAGCTTG
GGAGCGATGTCGGCGGCGCAGCTCAAGGAGATAGCGCGCGGGCTCGAGAACTCCGGCCACCGCTTCCTGTGGGTCGTGCG
GAGC---------CCGCCTGAGGACCCGGCCAAATACTTCCTGCCGCGCCCAGAGCCAGACCTGGACGCGCTCCTCCCCG
ATGGGTACTTGAAGAGGACGCAGGGGAGGGGGCTGGTCGTGAAGATGTGGGCGCCGCAGGTGGAGGTGCTGGGGCACGCC
GCGACCGGCGCGTTCGTGACGCACTGCGGGTGGAACTCTGTCCTGGAGGCGGCGTCGGCCGGGGTGCCGATGCTGTGCTG
GCCGCAGTACGCCGAGCAGAGGGCGAACAAGGTGTTCGTGGTGGACGAGATGAAGCTCGGGGTGGTGATGGAAGGGTACG
ACGAGGAGCTTGTCAAGGCAGAGGAGGTGGAGAAGAAGGTGAGGCTGGTGATGGAGTCCGA-------------------
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>SNPs
----S---------------------------S------------S-----S-S--------------------------
---------S------S--------------------S--------S--S------S-------------------S---
-------------S----S--S-------S----S------------S---------S--------S--S----------
----------------S-------S-----------S-S---SS----S--S--------S-----S-------------
----S------------------------S-------------SS-S--S-----------S---S------S-------
--S-------------------------S--------S-S-----------------------------S--S-------
-----S-S--S--------------S----------------------S---------------------------S---
-------S--------S---S----------------------S--SS-------S--SS--------------------
-------S------------S------------S-------------------S----SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------SS---
-------------SS--S---S-S---------------------------------------S-----------S--S-
-------------------------------------------------------S---S------------S-------
------------S-------------------------------------------------------------------
----------------------------S---------------------------S-----------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------SS-----------------------------------------------------------
--------------------------------------------------------------------------------
------------S-----------------------------------S-------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S-----------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
-------------------S----------------S-----------S-------------------------------
---------SS------S-SSS---------------S--------------------------S------S--------
---------S----S---S----------S---S------------S------S-----S--------------------
-------S----S--------S-----S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_759
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CACGACCGCAGACTCCTTTA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
>reverse_2449
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------GTTCGCCTTGTTCAGCTTGG------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
