>input_sequence_52008
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---------------------------------ATGGCGGG---GGTGGTGCAGAGCGTGCAGGCCTTGGCGTCGTCGCT
GGGTGCGCTCCCGCCGGAGTTCGTGCGGCCCGAGCACGAGCGGCCGCGCGCCACCACTTTCCGCGGGGCCTCACCGCTGC
AGATCCCAGTGGTCGACATGTCCTTGCCGGACGCCGGCAGCCGCATGGTGGAAGCGGCGAGGGAATGGGGGATCTTCCAG
GTGGTGAACCACGGCGTGCCGGCGGATACCGTGGCGGAGCTGCAGCGCGTGGGGCGGGAGTTCTTCGCGCTCCCGCAGGA
GGAGAAGCAGCGGTACGCCATGGACCCGGCCTCGGGGAAGACCGAGGGCTACGGCTCCAGCGTCCAGAGGAGCAC---CG
GCGACAGGAAGATATGGTCCGACAACTTGTTCCACGCCATCTCGCCGCCGGCCGCGGTGAACCACGGCTTCTGGCCGGAC
AAACCCAGGGGGTACCGGGAGGCCAACGAGGCGTACTGCGGCCACATGAGGCGGCTGACGCGGGAGGTACTGGAGCGCCT
CTCGGCCG-GGCTGGGCCTGGAGAAGGGCGCCATGGCGGAGGCGTTCGCCGGCGGCGACGACGGCCTGGTGCTCATGCAG
AAGGTCAACTTCTACCCGCCGTGCCCGCAGCCGGAGCTCGTGCTCGGCTTCGCGCCGCACACCGACCTGTGCGCGCTCAC
GGTCCTCGTAGCCAACGACGTGCCGGGCCTCCAGGTGTCCAAGGACGGCCATTGGTACGACGTCGAGCACGTGCCAGGAG
CCCTCATCGTCAACGTCGGCGACCAGATCGAGGCAAGCTAACACTCCATTC-TTCTTCACTTTGATCGTACCGTCTCCTC
GACCTCAAGTGAACGTCCTACATGTG---------------------TGTTTGTGGCAGATTTTGAGCAACGGGAGGTAC
AGGGCGGCGCTGCACCGGGCGACCGTGAGCAAGGAGAAGACGCGGATGTCGTGGCCTGTGTTCGTGCATCCGCGAAGAGA
GTACATCGTCGCGCCGCACCCGCGCCTCGTCGCCGGCGAGATCCCTGCCAAGTACGACTACAAGGCCAAGACGTTCGAGG
ACTACACGTACTGCAAGATCAACAAGCTACCGCAGTAGTCGAT--------CG---------------------------
TCGTCCGAGCCGCCGGCTGGCCATTCATTGCTTGCACGCATGAGCAAATGC----AGTGATATCAACATTCACCTCTGCA
TGCAAG-CTTCGGTATTCAACAAAC----AAACTCGCTCATACGTGAG-AGATCGTAATAATGTTATCCT--------CT
ATGTAAGTTTA-TATTTTGAGTATTTTCTCTTCCTTATT------ATCTTCAGCGTGTGGTCCGTGTGAGTCAGTTTCAT
TATCCTTATCAATCATCAC-------------------------------------------------------------
------------------------CTCTCACACACCCAGCGACATTGATTTGATATCCTAAT-------C------GTGA
AAGTGATGAATGGAGA-GGGCATTGTCTCTGTTTTTTTCTAGAA------------------------------------
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>chr4D_1_TraesCS4D01G339800
AGCATGTACACATTGCTATTTTGCCGGGAGGAACTGTCTGTCTCATATGTGTCGGATTTTCAAAAGGGTACATGCTATTG
TTATCCTCAATTTTACATCTTCAAATCTCCATCCTTACGATGTTAAG-----ACCGTAATCCTATATGCCTAGACGGCAT
TGCTAAATCTCAGACAAGATCTTGCGTGAAGATCCATGTAAAATTTT-------ATTTTATTTTTATATGTTTTGTCACT
TGACTGAGATTTAGATTAAATCTCAGATGACTGAGATATAGCTACACTTATATTAGATCCTTCATCGCTACTACCTCTAT
TATCTTAAAATGCACACATGTCATCTCATCAGAGTCCCACCACAACATGCATACTAGCATGAGAGGAACTTCTTCATTAT
TAGTTGATCTCATGCACATATCTCATCTTACTACACATGTCACCTCATCAAAGGTCCACTCAACATGATAAGAAGTATTA
TATTACATTATGTCACTTATGTTCAAAATATTTTTCGCCACAAATAATCAAATACAATATATAATATTCATTTGTAGTTT
TATTTTATATATTATTACTTCAACTATGCATGTTTCGTACAATCATATCACTAAAATATATTGC----------------
-------------------------AATTGATTCTTGCGGCAACGTGTGGGGTATTCTCTACTAGTATGTATCATGCACA
TCCAACTAAACCAAAACAACTATTACCTCTGATCCATAACAAGTGTCGTAGTTTTAAACTGACCCCAATTCAAAGCTACA
ACACTCAATTTGGATTGGAGGGTGTAT--AAAACATTTCTCGCCACGCCGCGTGGTGAGCAATCATCAATCATTAACAAG
ACTTTCCGC----------AAAAAAATCAATCATTAAAAAGAACATTTCTCAAAA---AAAAC-TAATAAAACAACTAAA
ACATCGGGC----GCGGCACAGCGTGCAGTACAAATATGCGCCCGGCCGGCACATAGATGCAAAAGGCGCGAGAGCTGCA
CAAATATAAATCTTGAGCTGGTTGATTCGAGGTATGGCGGG---GGTGGTGCAGAGCGTGCAGGCCTTGGCGTCGTCGCT
GGGTGCGCTCCCGCCGGAGTTCGTGCGGCCCGAGCACGAGCGGCCGCGCGCCACCACTTTCCGCGGGGCCTCACCGCTGC
AGATCCCAGTGGTCGACATGTCCTTGCCGGACGCCGGCAGCCGCATGGTGGAAGCGGCGAGGGAATGGGGGATCTTCCAG
GTGGTGAACCACGGCGTGCCGGCGGATACCGTGGCGGAGCTGCAGCGCGTGGGGCGGGAGTTCTTCGCGCTCCCGCAGGA
GGAGAAGCAGCGGTACGCCATGGACCCGGCCTCGGGGAAGACCGAGGGCTACGGCTCCAGCGTCCAGAGGAGCAC---CG
GCGACAGGAAGATATGGTCCGACAACTTGTTCCACGCCATCTCGCCGCCGGCCGCGGTGAACCACGGCTTCTGGCCGGAC
AAACCCAGGGGGTACCGGGAGGCCAACGAGGCGTACTGCGGCCACATGAGGCGGCTGACGCGGGAGGTACTGGAGCGCCT
CTCGGCCG-GGCTGGGCCTGGAGAAGGGCGCCATGGCGGAGGCGTTCGCCGGCGGCGACGACGGCCTGGTGCTCATGCAG
AAGGTCAACTTCTACCCGCCGTGCCCGCAGCCGGAGCTCGTGCTCGGCTTCGCGCCGCACACCGACCTGTGCGCGCTCAC
GGTCCTCGTAGCCAACGACGTGCCGGGCCTCCAGGTGTCCAAGGACGGCCATTGGTACGACGTCGAGCACGTGCCAGGAG
CCCTCATCGTCAACGTCGGCGACCAGATCGAGGCAAGCTAACACTCCATTC-TTCTTCACTTTGATCGTACCGTCTCCTC
GACCTCAAGTGAACGTCCTACATGTG---------------------TGTTTGTGGCAGATTTTGAGCAACGGGAGGTAC
AGGGCGGCGCTGCACCGGGCGACCGTGAGCAAGGAGAAGACGCGGATGTCGTGGCCTGTGTTCGTGCATCCGCGAAGAGA
GTACATCGTCGCGCCGCACCCGCGCCTCGTCGCCGGCGAGATCCCTGCCAAGTACGACTACAAGGCCAAGACGTTCGAGG
ACTACACGTACTGCAAGATCAACAAGCTACCGCAGTAGTCGAT--------CG---------------------------
TCGTCCGAGCCGCCGGCTGGCCATTCATTGCTTGCACGCATGAGCAAATGC----AGTGATATCAACATTCACCTCTGCA
TGCAAG-CTTCGGTATTCAACAAAC----AAACTCGCTCATACGTGAG-AGATCGTAATAATGTTATCCT--------CT
ATGTAAGTTTA-TATTTTGAGTATTTTCTCTTCCTTATT------ATCTTCAGCGTGTGGTCCGTGTGAGTCAGTTTCAT
TATCCTTATCAATCATCAC-------------------------------------------------------------
------------------------CTCTCACACACCCAGCGACATTGATTTGATATCCTAAT-------C------GTGA
AAGTGATGAATGGAGA-GGGCATTGTCTCTGTTTTTTTCTAGAACATGC--ATTTGTCTCTCTCTG--------------
------------------GTGAGCAGT---------GGGGCAGCAGGATCGTCTTCACGTGTTGCGGGTTTCTTCTCGGA
AGCGTCTGTTTCACATTCAACTGAAAACGAACTGACCTGCAAC----AA-AAAAAAATCAGCCAATAAAAACATGACAGT
TGTATGTA-TGAAACCGAACTGACATTCGACTGAAAACAAATTCATCATCGCTCACAAACTTCAACCCACTCCAAGAAGG
ACTAAAAGCAATCCATCTATATCTATATCAATATAAAAAGACCCAAAGAGACAGATCCAATTGATCTCAGCAATCAAACT
ACGTCAATCCAATGACCTAGACTGCTTCAATGATGAGCGTTCAACATGTTTAACGTGAGATTAATCTTCTCTCCCCGGGG
GCGCGGCATCCGATTTAATCAAAGAATAGATCGATTCATAGATTAGATTAGGTCAATTCAATTTTCGAAATTCTATGAGA
TTAGGTTTTCTTTAGCCACCAAATAAATCTTTGAAAGACCCAAATTCCGGTGAGAAAAATCCTAGCAGATCGGTGCAGCA
ATCTTTATCCGAGACGGCGGCCAAATCACTTGATGCATCCTCGATCCCTGTGCTCCAACAGGCGATGGTACGGTGGACGG
ACTCCTGCATCGGCCGCGCCCGCCTCTACATCAACCAACTCCGTCCGCCTAAAGACGCACCGGACACCAGCGCTGGAGCA
CGGGAGGGACCTCGACAGCCAGTACCCGGCGAGCCACATGCAACAAGATTGCATCCACGGACAGGTGTGCTTGTTCAGCA
ATTACTATCGGCTAGTTCTTACGTGAACATGCATCATGCCAGGGCAACATGGGATGTGGAATACATCCACGATCCTAGAT
CGATTCGCCGGTGCACACGATGGCCTCCATCATCGAAGCTGCGGCCTCGCCACGGGACTTCGTGCTGAAGCGCCAGCCGC
CAATCAGCTGTCGTCGTAGTCGCGCACCAGCAGGCTTCGAGTCGCTCACGTAC
>chr4B_1
AGCACGTACACGTTGCTATTTTGCCGGGAGGAACTGTCTCATAC----GTGTCGGATTTTCAAAAGGGTACATGCTATTG
TTATCCTCAGTTTTACATCTTCTAATCTCCATCCCTACGATGTTAAGTCAACACCGTAATCATGTATACCTAGACGGCAT
TGCTAAAACTCAGACAAGATCTTGCGTGAAGATCCATATAAAATTTCCTTCAAAATTTTTTTTTTGTATATTTTGTTGCT
TTACTGAGATTTAGATTAAATCTCAGATGAGTAAGATATAGCTACACCTATATA--ATCATTCATCCCTACTACCTTTAT
TATCTTAACACGCAAACATGTCATCTCATCAGAGTCCCACCACAACATGCATGCTAGCATGAGAGGAACTTCTTCATTAT
TAGTTGATCTCATGCATACATCCCATCTTACCACACATGTCACCTCATCAAAAATCCACTCAACATGATGAAAA-TATTA
CATTACATTATGCCACTTACGTTTAAAATATTTTTTGCCACAAATAATCAAATAAATTTTATAATATTCATTTGTAGTTT
TATTTTATATATTATTACTACAACTGTGCATGTTTCC-ACAATCATATCACTAAAATATATTGC----------------
-------------------------ATGTATG-----------------------------------------ATACACA
CCCAACTAAGCCAAAACAACTATTACCTCTGATCCATAACAAGTGTCGTAGTTTTAAACTAACCCCAATTCAGAACTACA
GCACTCAATTTGGATTGGAGGGAGTAT--AAAACATTTCTCACCACGCTGCGTGGTGAGCAATCATCAATCATTAAAAAG
ACTTCCCACAAAAAAGTAAAAAAAATTCAATCATTACAAAGAACATTTCTCAAAA---TAATAATAATAAAACAACTAAA
ACATCGCGCGGGAGCGGCACAGCGCGCAGTACAAATATGCGCCCGGCCGGCATATAGATGCAAAAGGCGCGAGAGCTGCA
CAAATATAAATCTTGAGCTGGTTGATTCGAGGTATGGCGGG---GGTGGTGCAGAGCGTGCAGGTGCTGGCGTCCTCGCT
GGGTGAACTCCCGCCGGAGTTCGTGCGGCCCGAGCACGAGCGGCCGCGCGCCACCACTTTCCGCGGGGCCTCGCCGCTGC
AGATCCCAGTGGTCGACATGTCCTTGCCGGACGCCGGCTGCCGCATGGTGGAGGCGGCGACGGAGTGGGGGGTCTTCCAG
GCGGTGAACCACGGCGTGCCGGCGGATGCCGTGGCGGAGCTGCAGCGCGTGGGGCGGGAGTTCTTCGCGCTCCCGCAGGA
GGAGAAGCAGCGGTACGCCATGGACCCCGCCTCGGGGAAGACCGAGGGCTACGGCTCCTCCGTCCAGAGGAGCCC---CG
GCGACAGGAAGATATGGTCCGACAACTTGTTCCACACCATCTCACCGCCGGCCGCGGTGAACCACGGCTTCTGGCCGGAG
AAACCCAGGGGGTACCGGGAGGCCAAC------------------------------------GAGGTACTGGAGCGCCT
CTCGGCGG-GGCTGGGCCTGGAGGAAGGCGCCATGGCGGAGGCGTTCGGCGGCGGCGACGACGGCCTGGTGCTCATGCAG
AAGGTCAACTTCTACCCGCCGTGCCCGCAGCCGGAGCTCGTGCTCGGCTTCGCGCCGCACACCGACCTGTGCGCGCTTAC
GGTCCTCGTAACCGACGACGTGCCGGGCCTCCAGGTGTCCAAGGACGGCCGCTGGTACGACGTCGAGCACGTGCCAGGCG
CCCTCATCATCAACGTCGGCGACCAGATCGAGGCAAGCTAACACTCCATTTGTTCTTCGCTTTGATCGTACCGTCTCG--
----TCAAGTGAACGTCCTAGAA-TG---------------------TGTTTGTGGCAGATCTTGAGCAATGGGAGGTAC
AGGTCGGTGTTGCACCGGGTGACGGTGAGCAAGGAGAAGACGCGGATGTCGTGGCCTGTGTTCGTGCACCCGCGGAAAGA
TTACGTCGTCGGGCCGCACCCGCGCCTGGTCGGCGGTGGGATCCCGGCCAAGTACGACTACAAGGACAAGACGTTCGAGG
ACTACACGTACTGCAAGATCAACAAGCTACCGCAGTAGTCGAT--------CG---------------------------
TCGTCC----------------A---------TGCACGCATGAGCAAATGTTCGTAGCGATATCAACATTCACCTCTGCA
TGCAAATCTTCAGTATTCAA-CAAC----AATCTTGCTCATACGTGAG-AGATCATAATAATATTATCCT--------CT
ATGTAAGTTTA-GATTTGGGGTATTTTCTCTTCTTTGTT------ATCTTCACCGTATGGTCGGTGTGAGTCAGTTTCAT
TATCCTTATCAATCATCACCTCGCACCAACCAGCC--AGAAA---------------TCCCCTGATGTAGCACCCGCCTT
CCCGTCACTCAAATCCGTTCATTACTCTCACACACCCAGCGACATTGATTTGATATCCTAACCAATGGAC-------TGA
AAGTGATGAATGGAGGGGGGCATTGTCTCTGTTTTTT-CTACAACAGGCAGATTTGTCTCTCTCTATTCTCGCAAAAAAA
AAGATTTGTCTCTCTCTAGTGAGCATATAGACAGTAGG---------ATTGTCATCACGTGTTTTGG--------TTGGA
CATGTCTATTTCACATTCAATTGAAAACGAACTAACCTTCAAC----AA-AAAAAAAACAGCCAATAAAAACATGACACT
TGTATGCATTGAAACCGAATTGACATTCGACTGAAAACAAATTCATCATCACTCAAAAACTTCAACCACTC---------
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>chr5A_551
--------------------------------------------------------------------------------
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--TTTTATCTATTATTACTTCAACTATGCATGTTTCATACAACCATGTCAGTAAAATATATTGCAATTTATTCCTGCGGC
GACGCGTGAGGTATTCTGTAGTAGTATGTATG-----------------------------------------ATGCATA
CCCAACTAAACCAAAACAACTATTACCTCTGATCCATAACAAATGTCGTAGTTTTAAACTAACCTCAATTCAAAACTACA
ACACTCGATTTGGATTGGAGGGAGAGTACAAAACATTTCTCACCACGCTGCGTGGTGAGCAATCATCAATTATTAAAGGG
ACTTCCGGC----------AAAAAAATCAATCATTAAAAAGAACATTTCTAAAAAAACTAATAATAATAAAACAACTAAA
ACATCGGGC----GCGGCACAGCGGGCAGTACAAATATGCGCCCGGCCGGCATATAGACGCAGAAGGCGCGAGATCTGCA
CAAATATAAATCTTGAGCTGGTTGATTCGAGGTATGGCGGG---GGTGGTGCAGAGCGTGCAGGTGCTGGCGTCCTCGCT
GGGTGCGCTCCCGCCGGAGTTCGTGCGGCCCGAGCACGAGCGGCCGCCCGCCACCACTTTCCGCGGGGCCTCACCGCTGC
AGATCCCAGTGGTCGACATGTCCTTGCCGGACGCCGGCAGCCGCATGGTGGAGGCGGCGAGGGAATGGGGGATCTTCCAG
GCGGTGAACCACGGCGTGCCGGCGGATGCCGTGGCGGAGCTGCAGCGCGTGGGGCGGGAGTTCTTCGCGCTCCCTCAGGA
GGAGAAGCAGCGGTACGCCATGGACCCGGCCTCGGGGAAGACCGAGGGCTACGGCTCCAGCGTCCAGAGGAGCCC---CG
GCGACAGGAAGATATGGTCCGACAACTTGTTCCACACCATCTCGCCGCCGGCCGCGGTGAACCACGGCTTCTGGCCGGAG
AAACCTAGGGGGTACCGGGAGGCCAACGAGGCGTACTGTGGCCACATGAGGCGGCTGACGCGGGAGGTACTGGAGCGCCT
CTCGGCGG-GGCTGGGCCTGGAGGAGGGCGCCATGGCGGAGGCGTTCGGCGGCGGCGACGACGGCCTGGTGCTCATGCAG
AAGGTCAACTTCTACCCGCCGTGCCCGGAGCCGGAGCTCGTGCTCGGCTTCGCGCCGCACACCGACCTGTGCGCGTTTAC
GGTCCTCGTAGCCGACGACGTGCCGGGCCTCCAGGTGTCCAAGGACGGGCGCTGGTACGACGTCGAGCACGTGCCAGGCG
CCCTCATCGTCAACGTCGGCGACCAGATTGAGGCAAGCTAACACTCCATTTGTTCTTCCCTTTGATCGTACCGTCTCG--
----TCAAGTGAACGTCCGAGAA-TA---------------------TGTTTGTGGCAGATCTTGAGCAATGGGAGGTAC
AGGGCGGTGCTGCACCGGGTGACGGTGAGCAAGGAGAAGACGCGGATGTCGTGGCCTGTGTTCGTGCATCCGCGGCTAGA
GTACGTCGTCGCGCCGCACCCGCGCCTCGTCGCCGGCGAGATCCCTGCCAAGTACGACTACAAGGCCAAGACGTTCGAGG
ACTACATGTACTGCAAGATCAACAAGCTACCACAGTAATCGAT--------CG---------------------------
TCGTCC----------------ATGCATTGCTTGCACGCATGAGCACATGTTCGTAGTGATATCAACATTCACCTCTGCA
TGCAAG-CTTCGCTATTCAA-CAAACAATAATCACGCTCATACGCGAG-AGATCGTAATAATATTATCATGTACAGTACT
ATGTAAGTTTA-GATTTTGGGTCTTTTCTTTTCTTTATTTATTATATCTTCATCGTGTGGTCGGTGTGAGTCAGTTTCAT
TATCCTTATCAATCATCACCTCGCACCAACCAGCCCCAGAGATGGAAACGCCGCAGCTCCCCTGATGTGGCAGCCGCCTT
CCCGTCACTCAAATCCATTCACTACTCCCACACACCCAGCGACATTGATTTGACATCCTAACCATTATTAATGGTGGTGA
AAGTGATGAATGGAGGGGGGCATTGTCTCTGTTTTTT-CTAGAACAGGCAGATTTGTCTCTCTCTG--------------
------------------GTGAGCATT---------GG---------ATCGTCTTCACGTGCTGCGGTTTTCCTCTCGGA
AGTGTCTATTTCACATTCAACTGAAAACGAACTGACCTTCAAC----AACAACAAAATCAGCCAATAAAA-CATGAAAAT
TGTATATA-TGAAACAGAGCTGACATTCGACTGAAACAAATTTGTCATTGCTCACAAAC-TTCAACCCACTC--------
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>chr4D_975
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-------AAATCTTGAACTGGTTGATTCGAGGTATGGCGGG---GGTGGTGCAAAACGTGCAGGCCTTGGCGTCGTCGCT
GGCTGCGCTCCCGCCGGAGTTCGTGCGGCCCGAGCACGAGCGGCCGCGCGCCACCACTTTCCTCGGGGCCTCGCCGCTGC
AGATCCCAGTGGTTGACATGTCCTTGCCGGACGCCGGCTGCCGCATGGTGGAGGCGGCGACGGAGTGGGGGATCTTCCAG
GCGGTGAACCACGGCGTGCCGGCGGATGCCGTGGTGGAGCTGCAGCGCGTGGGGCAGGAGTTCTTCGCACTGCCGCAGGA
GGAGAAGCAGCGGTACGCGATGGACCCGGCCTCGGGGAAGACCGAGGGCTACGGCTCCACCGTCCAGAGGAGCCC---CG
GCGACAAAAAGATGTGGTCCGACTTCTTGTTCCACAACGTCTCGCCGCCGGCCGCGGTGAACCACGGCTTCTGGCCAGAC
AAACCCAGGGGGTACCGGCAGGCCAACGAGGCGTACTGCGGCCACATGCGGCGGCTGACGCGGGAGGTACTGGAGCGGCT
CTCGGCGG-G-CTGGGCCTGGAGGAGGGTGCCATGGCGGAGGCGTTCGGCGGCGGCGAGGACGGCCTGGTGCTCATGCAG
AAGGTCAACTTCTACCCGCCGTGCCCGCAGCCGGAGCTCGCGCTCGGCTTCGCGCCGCACACCGACCTGTGCGCGCTCAC
GGTCCTCGTTGCCAACGGCGTGCCGGGCCTCCAGGTGTCCAAGGACGGCCTCTGGTGCGACGTCGAGCACGTGCCAGGAG
CCCTCATCGTCAACGTCGGCGACCAGATCGAGGCAAGCTAACGCTCCATTTGTTCTTCACTTTGATCGTACCGTGTCG--
----TCAACTGAACGTCCCACACGTG---------------------TGTTTGTGCTAGATTTTTAGTAACGGGAGGTAC
AGGTCGGTGCTGCACCGGGCGACGGTGAGCAGGGAGAAGACGCGGATGTCGTGGCCGGTGTTCGTGGAGCCGCGGAGAGA
GTACGTCGTCGGGCCGCACCCGCGCCTCGTCGCCGGCGAGATCCCTGCCAAGTACGACTACAAGGCCAAGACGTTCGAGA
ACTACAGATACTGCAGGATCAACAAGCTACCGCAGTAGTCGAT--------CGATCGATCGATCTTCGTCCGAGCCGCCG
CCGGCT----------------ATGCATTGCTTGCAGGCGTGAGCAAGTGC----AGTGATATCAATTTTCACCCTACA-
---AAG-CTTCAGTGTTCAACCAAC----AATCTCGCTTATACGCGATCATATAAAAAGAATGTCATTCC--------CT
ATCTAAGTTAAATATTTTGGTTATTTTCTCTCTTTTATCTTCACCGTCTG------------------------------
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>chr6B_998
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------------------------------GGAATGGCGGGGACGGCGGCGCAGAGCGTGCAGGCGCTGGCGTCCTCGCT
GGGCGCGCTCCCGCCCGAGTTCGTGCGGCCCGAGCACGAGCAGCCGCGCGCCACCACGTTCCGCGGGGCCGCGCCGCCGG
AAATCCCCGTCATCGACATGTCCTCGCCGGGCGCCTGGCGCCGCATGGCGGAGGCCGCGGCGGAGTGGGGCATCTTCCAG
GTGGTGTGCCACGGGGTGCCGGCTGAGGCCGTGGCGGAGCTGCAGCGCGTGGGCCGCGGGTTCTTCGCGCTGCCGCAGGA
GGAGAAGCAGCGGTACGCCATGGACCCGGCCGAGGGGAAGACCGAGGGCTACGGCTCCACGCTGCGGAAGGGCGACCTCG
AGGGCAAGAAGGCCTGGGCCGACTTCCTCTTCCACAACGTCGCGCCGCCGGCCGCCGTGAACCACGCCGTCTGGCCGGAG
AGCCCCGAGGGGTACAGGGAGGCCAACGAGGCCTACTGCGGCCACATGCTGCGGCTCACGCGGGAGCTGTTCGGGCGCCT
CTCGGCGGAG-CTGGGCCTGCAGGAGGGCGCCATGGCGGAGGCGTTCGGCGGCGACGACG------TGGTGCTCCTCCAG
AAGATCAACTTCTACCCGCCGTGCCCACAGCCGGAGCTCGCGCTCGGCCTCGCGCCGCACACCGACATGAGCACGCTCAC
CGTCCTCCTGCCCGACGAGGTGCAGGGCCTCCAGGTGTTCAAGGACGGATGCTGGTACGACGTCAACTACGTGCCCGGCG
CCCTCATCATCCACATCGGCGACCAGATCGAGGCAAGTGCCTCAA-----------------------ACTTGCAGCGTC
GCATCAAC-------TATTTCACCTTTGACATGTGTTAATTTTGCATTGTTTGTGATAGATCATGAGCAACGGGAGGTAC
AAGGCCGTGCTGCACCGGACGACGGTGAGCCGGGAGAAGACGCGGATGTCGTGGCCGGTGTTCGTGGAGCCGCCGCCGGA
GCACGCCGTCGGGCCGCACCCGCAGCTCGTCACCGACGAGTTCGCGGCCAAG------TACAAGGCCAAGAAGTTCAAGG
ACTACAAGTACTGCAAGATCAACAAGCTACCACAGTAG------------------------------------------
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>chr6A_1004
GCGGG---------------------------------------------------------------------------
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-------------------------------------------CGGCGGCGCAGAGCGTGCAGGCGCTGGCGTCCTCGCT
GGGCGCGCTCCCGCCCGAGTTCGTGCGGCCCGAGCACGAGCAGCCGCGCGCCACCACGTTCCGCGGGGCCGCGCCGCCGG
AGATCCCCGTGGTCGACATGTCCTCACCGGACGCCGGGCGCCGCATGGCGGAGGCAGCGGCGGAGTGGGGCATCTTCCAG
GTGGTGGGCCACGGCGTGCCGGCCGACGCCGTGGCGGCGCTGCAGCGCGTGGGCCGCGGGTTCTTCGCGCTGCCGCAGGA
GGAGAAGCAGCGGTACGCCATGGACCCGGGCGAGGGCAGGACCGAGGGCTACGGTTCCACGCTGCGGAAGGGCGACCTGG
AGGGCAAGAAGGCCTGGGCCGACTTCCTCTTCCACAACGTCGCGCCGCCGGCCGCCGTGAACCACGCCGTCTGGCCGGAG
AGCCCCGAGGGGTACAGGGATGCCAACGAGGCCTACTGCGGCCACATGGTGCGGCTCACGCGGGAGCTGTTCGGGCGCCT
CTCGGCGGAG-CTGGGGCTGGACGAGGGCGCCATGGCGGAGGCGTTCGGCGGCGACGACG------TGGTGCTCCTCCAG
AAGATCAACTTCTACCCGCCGTGCCCGCAGCCGGAGCTCGCTCTCGGCCTCGCGCCGCACACCGACATGAGCACGCTCAC
CGTCCTCTTGTCCGACGAGGTGCAGGGCCTCCAGGTGTTCAAGGACGGATGCTGGTACGACGTCAACTACGTGCCCGGCG
CCCTCATCATCCACATCGGCGACCAGATCGAGGCAAGTGCCTCAA-----------------------ACTTGCAGCGTC
GCATCAACTATATATTATTTCACCTTTCACATGTGTTAATTT-GCATTGTTCGTGATAGATCATGAGCAACGGGAGGTAC
AAGGCCGTGCTCCACCGGACGACGGTGAGCCGGGAGAAGACGCGGATGTCGTGGCCGGTGTTCGTGGAGCCGCCGCCGGA
GCACGTCGTCGGGCCGCACCGGCAGCTCGTCGCCGACGAGTTCCCGGCCAAG------TACAAGGCCAAGAAGTTCAAGG
ACTACAAGTACTGCAAGATCAACAAGCTACCGCAGTAGTC----------------------------------------
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>chr6D_1004
GCGGG---------------------------------------------------------------------------
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-------------------------------------------CGGCGGCGCAGAGCGTGCAGGCGCTGGCGTCCTCGCT
GGGCGCGCTCCCGCCCGAGTTCGTGCGGCCCGAGCACGAGCAGCCGCGCGCCACCACGTTCCGCGGGGCCGCGCCGCCGG
AGATCCCCGTGGTCGACATGTCCTCGCCGGACGCCGGGCGCCGCATGGCGGAGGCCGCGGCGGAGTGGGGCATCTTCCAG
GTCACCGGCCACGGCGTGCCGGCCGAGGCCGTGGCGGAGCTGCAGCGCGTGGGCCGCGGGTTCTTCGCGCTGCCGCAGGA
GGAGAAGCAGCGGTACGCCATGGACCCGGGCGATGGCAGGACCGAGGGCTACGGCTCCACGCTGCGGAAGGGCGACCTGG
AGGGCAAGAAGGCCTGGGCTGACTTCCTCTTCCACAACGTCGCGCCGCCGGCCGCCGTGAACCACGCCGTCTGGCCGGAG
AGCCCCGCGGGGTACAGGGAGGCCAACGAGGCCTACTGCGGCCACATGGTGCGGCTCACGCACGAGCTGTTCGGGCGCCT
CTCGGCGGAA-CTGGGGCTGGAGGAGGGCGCCATGGCGGAGGCGTTCGGCGGCGACGACG------TGGTGCTCCTCCAG
AAGATCAACTTCTACCCGCCGTGCCCGCAGCCGGAGCTCGCGCTCGGCCTCGCGCCGCACACCGACATGAGCACGCTCAC
CGTCCTCCTGCCCGACGAGGTGCAGGGCCTCCAGGTGTTCAAGGACGGATGCTGGTACGACGTCAACTACGTGCCCGGCG
CCCTCATCATCCACATCGGCGACCAGATCGAGGCAAGTGCTAGCTGGAACGTAGTACGCTCTTGATCGACTTGCGCCGTG
GCATCAGC-------TATTTCACCGTTTGACATGGAGGTTAA---------TGTGATAGATCATGAGCAACGGGAGGTAC
AAGGCCGTGCTGCACCGGACGACGGTGAGCCGGGAGAAGACGCGGATGTCGTGGCCGGTGTTCGTGGAGCCGCCGCCAGA
GCACGTCGTCGGGCCGCACCCGCAGCTCGTCGCCGACGAAAGCCCGGCCAAG------TACAAGGCCAAGAAGTTCAAGG
ACTACAAGTACTGCAAGATCAACAAGCTACCACAGTAG------------------------------------------
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>chr4B_1446
--------------------------------------------------------------------------------
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----CCAGGGGGTACCGTCAGGCCAACGAGGCGTACTGCGGCCGCATCCTGCGGCTGACGCTGGAGGTACTGGAGCGCCT
CTCGGCGG-GGTTGGGCCTGGAGGAGGGCGCCATGGCGGAGGCGTTCGGGGGCGGCGACGACGGCCTGGTGCTCATTCAG
ATGGTCAACTTCTACCCACCGTGCCCGCAGCCAGAGCTCGCGCTCGGCTTCGCGCCGCACACTGACCTGTGCGCGCTCAC
GGTCCTCGTGGCCAACGGCGTGCCGGGACTCCAGGTGTCCATGGACGGCCTCTGGTACGACGTCGAGCACGTGCCAGGAG
CCCTCATCGTCAACGTCGGCGACCAGATCGAGGCAAGCTAACACTCCATTTGTTCTTCACTTTGATCGTACCGTGTCG--
----TCAACTGAACGTCCCGCACGTG---------------------TGTTTGTGCTAGATTTTTAGTAACGGGAGGTAC
AGGTCGGTGCTGCACCGGGCGACGGTGAGCAGGGAGAAGACGCGGATGTCGTGGCCGGTGTTCGTGGAGCCGCGGAGAGA
GTACCTCGTCGCGCCCCACCCGCGCCTCGTCGCCGGCGAGATCCCTGCCAAGTACGACTACAAGGCCAAGACGTTCGAGA
ACTACAGATACTGCAGGATCAACAAGCTACCGCAGTAGACGTCCGAGCCGCCG---------------------------
CCGGCT----------------ATGCATTGCTTGCACGCGTGAGCAAATGC----AGTGATATCAATTTTCACCCTGCA-
---AAG-CTTCAGTGTTCAACCAAC----AATCTCGCTCATA--------------------------------------
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>chr5A_2129
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-------------------------CATTGCTTGCACACATGAACAAATGTTCATAGTGATATCAACATTCACCTCTGCA
TGCAAATCTTCAGTATTCAA-CAAC----AATCTTGCTCACACGTGAG-AGATCATAATAATATTATCCT--------CT
ATGTAAATTTA-GATTTTGGGTCTTTTCTCTTCTTTATT------ATCTTCACCATGTGGCCCGTGTAAGTCAGTTTCAT
TATCCTTATCAATCATCACTTGGCACCAACCAGCT--AGAAATGGAAACGCCGCAGCTCCCTTGATGTGGCAGCCGCCTT
CCTGTCACTGAAATCTATTCATTATTCTCACACACCCAGCGACATTGATTTGATATCCTAACCAATGGAC------GTGA
AAGTGATGAATGGAGGGGGTTATTATCTCTGTTTTTT-CTAGAACAGGCAGATTTGTCTCTCTCTG--------------
------------------GTGAGCATATAGACAGCAGG---------ATTGTCATCACGTGTTTTGGTTTTCTTCTTGGA
AATGTCTATTTCACATTCAATTGAAAACAAACGGACCTTCAAGAAAAAA-AAACAAATCAGCCAATAAAA-CATGACACT
TGTATGCA-TGAAACTGAAATGACAGTCGACTGAAAACAAATTCATCATCACACAAAAA-TTCAACCCACTC--------
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>SNPs
----S------S---------------------------SSSS-SSSS--------------------------------
---------S------------S-----------S--------------------------S-S---S------------
-------S-----------------------------S--------S------------S-----S---S------SS--
-S----------------------------S-S--------------S-----SSS---S------S---------S---
--------S-S---S-------------------------------------S---------------------------
----------------S-S---S--------S--------------------SS---------------S-S--S-----
S-----------S------S---S-----------S------------------S-S-S---------------------
------------------------------------S-------------------------------------------
--------------------------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
S-----------------------------------------------------------S-------------S-----
----------------------S------------------S------S---------------------------S---
----S-----------------------------------------------------S--SS-----------------
------------------------S---------------------------S---------------------------
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----------------------------------------------------S---------------------------
---------------------------S----------------------------------------------------
-------------------------------------------------------------------------S------
-----------------------------------S--------------------------------------------
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------S----------------S------------------------S-------------------------------
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--------------------------------------------------SS----------------------------
--------------------------------------------------S--------------------------S--
-SSS------------------S---------------------------------------------------------
-------S---------------S--------------------------------------------------S-----
----S---------------------------------------------------------------------------
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------SSSSSSSSSSSSSSSS--S-------------------------------------------------------
---------------------S---------S------------------------------------------------
-------------------S-------------S------------------S---------------------------
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-------------------------------------------------------------S------------------
---------------S---------------------S--------S---------------------------------
-------------------------S------------SSSSSSSSS--------------------S------------
--S----S------------------------------S---------------------------------------S-
--------------------------------------------------S----S----------------SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_849
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-----------------------------AAAACATTTCTCGCCACGCC-------------------------------
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>reverse_2258
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-----------------TGGCCATTCATTGCTTGCAC-------------------------------------------
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>forward_2247
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-------------------------------------------------------------------CAGTAGTCGATCG
TCGTCCG-------------------------------------------------------------------------
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>reverse_3316
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-----------------------------------CATCCTCGATCCCTGTGCTC-------------------------
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