>input_sequence_51947
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-----------------------------------------------------------------------AGAGATTTA
AGGTCC---------------ATGATCGTCTAGTGCTCGATCGGTTCCCTCCTGGCGGAGCAGATC--AATGGAGCCGGC
GACGTTCTTCCGGTGCGTGCCGGACCATGG------------------GGAGGACGACGACGACGAGCAGAGCAGCGGCG
GGTGCTTCCTGGACGTGTACGTGCACGGCGCGCGCGGCATCCACAACATCTGCATCTACGCGGACCAGGACGTGTACGCG
CGCTTCTCCCTCACGTCCAGCCCGGGCCACGCGCCGGCGCTCTCCACGCGCGTGGCTGCCAGGGGCGGCGCCAGCCCGCG
CTTCGACGAGCGCCTCCCGCCGGTGCGCGTCCGCCGGGGCAGGCTCGGCACCGACGCGCTCAAGTGCGAGGTGTGGATGC
GCAGCTGCGCAGAGAGCGTCCTCGAGGACCAGCTCCTCGGGTTCGCGCTCGTGCCGCTCGCCGCCGTCGCGGCCGCTCAC
GGCGCGCGGGTGGAGCGGCGGGAGTTCTCCCTCTCTTCGACAGATCTCACCCACTCGCCCGCCGGCACGGTGAGCCTGTC
CCTCGCCCTCCGCTCCGGCCGCGGCGACGCGTGTATCGCGGGGCCGTCAGACCGCGCCGCGGCGGAGCCGTCGATCACGT
CTGAGGTGGTCATCCTTGAGCCGCCAGCGCCGCCGGTGGACTACTTGGGTATCGAGTTCCCTGACCTCAACACGGCCAAA
GAGAACGACGACATGGCCGTCCAGTACCTGCCGTTCTTGCACCTCGGGGTGGCGCCACAGGTGGCCATGGAGACGGGCAC
GAGCCCACGCGGCGAGAATTCGATGTCGGTGTCCTCGGAGGGAAGCAAGAACGCCTCGACGACCACCACGACCAGCGACG
ACAGGGCGATCGATGTCTCCTCCTCGGCGGCGACAGAGAAGCCGCATCGGCACGACGGCGCCCACGAGGCCACCGTGTCG
GCGCCGATGTGCTGCGGCGCGCCGGACACGCCGACGTCCAACGGAGGACCGGCGTATGGCAAGGAGAAGGTCGACGTTTT
CAAGTCTCCCATGGCCGCCGGCGACGTCATCGACATGGAGGCGGAGCAGAGCGCGATGCAGCGGCAGATCATGGAGATGT
ACGTGAAGAGCATGCAGCAGTTCACCGAGTCGCTGGGCGCGATGAGGCTGCCGATGCAGCTCGACGGCGACGGCGGCGCC
GGGGTGGTCGTTCAGAGGGACGAGAAGAAGCCGGAGCCGGAGGCGAGGAAGGACGGGGCGAGGGTCTTCTACGGAAGCAG
AGCTTTCTTCTGAAGAA-----------------------------GACTATAATTATTCAGAGTGTTGTGAAGAGACCT
ACTACGATTATTCAGAGCGTGGAAAATCTGATCTCTTCTTGCAAAGGTATTGATTGATCAGAGTGCGGTTAGATGGTGAC
TAGGTTTTGATTCTTCATCATCGTTGTTGATTTGATTCGT----------------------------------------
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>chr3B_1_TraesCS3B01G550300
TGTAATTATGGCACGAAGCTCGCTGTCATCCACAAATTTAGACAGGTGCCTACGATAATCCATGGCTCATCACGACCACA
GATGCACACGGGTGAACAGTAAAAGCCAAAAAAAT-TCAAAAACACCTAAAAATATACACATAAAAAAAGAACAAGTTTT
CTAAGGGCGGAATATTTTATGGCGGTTTGACATTGGAGGAGCTCGGGACAGGAAAAAGGGAAATCATTGCTCCAAAATAA
AATTTTCTGAACCTTTCCCAAAACACAGATTTTGCTTTTGTCTAGAGCTCGTCCGACGCCAAATCGCCATGAAATTTTGC
ACGTCCCAAGAAAACTTGTTCATCTTTGATGCAAAAGAAATAAACAGATTTGTTTGTTGTTTTGCTATTCCTTTTGATAT
TACTGGGAGGAGATGCTCCCTATCACCAAATCGCCGTCCTGATGCGCCTACGTCTACTCCATTGGAAGTTTTGTAGGACT
AAATCGTAATCACGGCTTACCATGTGAACAGAGCTAAGAGAAACAGAGCTATGCAGCACCGACCGATGTGAACTGTCCCC
TTTCCACTGTCAAACTTGGACAC-TTGACACGA-CCCATGACACTGCTTACTGCTGAATTTCTCTAGCAATGTTGCTGTC
AAATCATCCCTCAGCAATGTAGACAGACCCAGCTATACTTTTTCTTTTTCTCCAGCCATCATG-GTCTGCATTTCCCTGG
TGAT----AAACAAGTGCAACAACAACTACTACCCGATGGC------------------CGTGGCTGACCCGTCGAGGCC
AAGAATTGCGGTGCAAGGGTGTGGACAAGAAGCAACGGGAAAAGAGCACACATAGTGGACATGGATGATGCGCCGTCCCC
CGTGTGCACTCGGCTCCATTTTTCCTCCCTCGCCGTCCACCACCAACTCTCTC----TCCCCAAAGTCCTATCAATCAAA
CAATTCC-AAGAGTCAGTGAGAAACCGTCTGCAACTGCAAAGACTCCACGGCAAGCAAGGAGCACGCTACCAGAGATTTA
AGGTCC---------------ATGATCGTCTAGTGCTCGATCGGTTCCCTCCTGGCGGAGCAGATC--AATGGAGCCGGC
GACGTTCTTCCGGTGCGTGCCGGACCATGG------------------GGAGGACGACGACGACGAGCAGAGCAGCGGCG
GGTGCTTCCTGGACGTGTACGTGCACGGCGCGCGCGGCATCCACAACATCTGCATCTACGCGGACCAGGACGTGTACGCG
CGCTTCTCCCTCACGTCCAGCCCGGGCCACGCGCCGGCGCTCTCCACGCGCGTGGCTGCCAGGGGCGGCGCCAGCCCGCG
CTTCGACGAGCGCCTCCCGCCGGTGCGCGTCCGCCGGGGCAGGCTCGGCACCGACGCGCTCAAGTGCGAGGTGTGGATGC
GCAGCTGCGCAGAGAGCGTCCTCGAGGACCAGCTCCTCGGGTTCGCGCTCGTGCCGCTCGCCGCCGTCGCGGCCGCTCAC
GGCGCGCGGGTGGAGCGGCGGGAGTTCTCCCTCTCTTCGACAGATCTCACCCACTCGCCCGCCGGCACGGTGAGCCTGTC
CCTCGCCCTCCGCTCCGGCCGCGGCGACGCGTGTATCGCGGGGCCGTCAGACCGCGCCGCGGCGGAGCCGTCGATCACGT
CTGAGGTGGTCATCCTTGAGCCGCCAGCGCCGCCGGTGGACTACTTGGGTATCGAGTTCCCTGACCTCAACACGGCCAAA
GAGAACGACGACATGGCCGTCCAGTACCTGCCGTTCTTGCACCTCGGGGTGGCGCCACAGGTGGCCATGGAGACGGGCAC
GAGCCCACGCGGCGAGAATTCGATGTCGGTGTCCTCGGAGGGAAGCAAGAACGCCTCGACGACCACCACGACCAGCGACG
ACAGGGCGATCGATGTCTCCTCCTCGGCGGCGACAGAGAAGCCGCATCGGCACGACGGCGCCCACGAGGCCACCGTGTCG
GCGCCGATGTGCTGCGGCGCGCCGGACACGCCGACGTCCAACGGAGGACCGGCGTATGGCAAGGAGAAGGTCGACGTTTT
CAAGTCTCCCATGGCCGCCGGCGACGTCATCGACATGGAGGCGGAGCAGAGCGCGATGCAGCGGCAGATCATGGAGATGT
ACGTGAAGAGCATGCAGCAGTTCACCGAGTCGCTGGGCGCGATGAGGCTGCCGATGCAGCTCGACGGCGACGGCGGCGCC
GGGGTGGTCGTTCAGAGGGACGAGAAGAAGCCGGAGCCGGAGGCGAGGAAGGACGGGGCGAGGGTCTTCTACGGAAGCAG
AGCTTTCTTCTGAAGAA-----------------------------GACTATAATTATTCAGAGTGTTGTGAAGAGACCT
ACTACGATTATTCAGAGCGTGGAAAATCTGATCTCTTCTTGCAAAGGTATTGATTGATCAGAGTGCGGTTAGATGGTGAC
TAGGTTTTGATTCTTCATCATCGTTGTTGATTTGATTCGTTAGTGCAATTGCAAATTAGTACAGTACACCTCTAGCTAAG
ATTAACATGTGTGCGCTA---GAGTTTTGTGTGTATTCGGCGGGAGCAGAGCT---T---------TTCTTCTGAAGAAG
ACTACAATTATTCAGAGTGTTCTGTATAAAAACTGCGGTTATTCAGCCTGCCATGTCCTGCGGAATATCTGATCCCCGGG
CCACTGCATCTGGGAGATGCATGCAGCCACTTTATTAATCTAATCTCTGCCGAAGGTTTTGGTTGTTAATCATCTTTGCT
GGTGTTGCGCGCAATTACAAACTCCTGCAGTATATGTGATATGTCTTGCTAATAAGAGTAACATGTGGAGTGGAATGGAG
TTTCATGTGGGCATCAGCCGGCCAGGCAAGGTTGCTTGGTCAGATCTCCT-----CTGAACCTTCTTGAGGAGAGAGTGT
GAACACTTGCAGAAAAGCTGCAGATCATTGATCATTGAGGAACATTGAGATAGATCATTGTGAAACTAGTTATATCACTG
CACAAACTTGTATTAGCAGGGTACTCAAGTATGCTGCTTTTCTTGCCAAATTCTTGCTCCTGCCTCCTATCATATGGATG
GTCCCACCCCGCCCCATAGCATTGTTTCAGAAGCAAAGGAACACCTTGGTTTTGCTTCTTTCTTGAGCGT----------
---------------------------------------------------------------------CGCGTGGAGCC
AACCGCGAACCGTTGATGTGGACGTACGTCCGTGCATGAACGCGACCGACACCTGCTGTGTTTTACCACTTCTCCTGACA
AGAAATGGCAACGT------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------AGAAAGACTGAAGCCGACTCA
AGGGCAGGCAGAA-------AGAGAACTGCCTAATTCGTTGGATCCATGATGAGATTGATGCAAGGCAGCAATGGAGGCG
CTGGCTCTGGCTCTTCCACACATACGGTATCTCAGGGCAACTCCAACACAGCGTCTCGGCTGAGCCGACATATTTGTCCG
CTTTTTCATTTGGGTCGCCCGATGCGTTCAACGGTGGCCGGCCCATTCTGTGACATGTTTGTCTCGACATC
>chr3D_2
-GTAATTATGGCACGAAGTTTGCTGTCATCCACAAATTTAGACAGGTGCCTACGGT-ATCCATAGCTCATCACGACCACA
GATGCTCCCGGGTGAACAGTAAAAGCCAAAAAAATATCAAAAACACCTAAAAATATACACATAAAAAAAGAACAAGTTTT
CTAATGGCGGAAAATTTTATGGCGGTTTGACATTGGAGGAGCTCGGGACAGGAAAAAGGGAAATCATTGCTCCAAAGTCG
ATTTTTTT-AACCTTTCACGAAACATCGATTTTGTTTTTGTCCAGAGCTTGTT-GACGCCGAATCACCATGAAATTTTGC
ACGTCCCAAGAAAACTTGTTCATCTTTGATGCAAAAGAAA-AAACAAATTTGTTTGTTGTTTTGCTATTCCTTTTGATTT
TACTGGGAGGTGATGCTCCCTATCACCAAATCGCCGTCCTGATGCGCCTACGTCTACTCCATTGGAAGTTTTGTAGGACA
AAATCGTAATCACGGCTTACCATGTGAACTGAGCTA---------------TGCACCACCGACCGATGTGAACTGTCCCC
TTTCCACTGTGAAACTTCGACACTTTGACACGA-CCCATGACACTGCTTACTGCTGAATTTCTGTAGAAATGTTGCTGTC
AAGTCATCCCTCAGCAATGTAGACAGACCCAGCTATACTTTT-CCTTTTCTTGAGCCATCATGCGTCTGCATTTCCCTGG
TGATCGATAAACAAGTGCAGCAACAACTACTACACGATGGCGCCATGGCGAGGCCGATGCGTGGCTGACCCG-CGAGGCC
AAGAATTGCGGTGCAAGGGTGTGGACAAGAAGGAACGGGAAAGGAGCACACATAGTGGAGATGGATGATA-------CCC
CGTGTGCACTCGCCTCCATTTTTCCTCCCTCGCCGGCCACCACCTACTCTCTCCCCGA-CCCAAAGTCCTA--------A
CAATTCC-AAGGGTCAGTGAGAAACTGTCTTCAACTGCAAGCAAGAAACAC-----------------ACTAGAAATCTA
AGGTCCATGCTAAGGTCCATGATGATCGTCTAGTGATCAATCGGTTCCGTTCCGGCGAGTCCATCGGTAATGGAGCCTGC
CAGA---TTCCGGTACGTGCCGGATCATGTCGGGGGCGGCGGAGGGTTGGAGGAGGACGACGGCGAGGAGAGTGGCGGCG
GGTGCTTCTTGGACGTGTACGTGCACGGCGCGCGCGGCATCCACAACATCTGCATCTACGCCGACCAGGACGTGTACGCG
CGCTTCTCGCTCACGTCCAGCCCGGCCCACGCGCCGGCGCTCTCCACGCGCGTGGCCGCCGGGGGCGGCGCCAGCCCGCG
CTTCGACGAGCGCCTCCCGCCGCTGCGAGTCCGCCGGGGCAGGCTCGGCACCGACGCGCTCAAGTGCGAGGTGTGGATGC
GCAGCTGCGCCGAGAGCCTCCTCGAGGATCAGCTCCTCGGGTTCGCGCTCGTGCCGCTCGCCCAAGTCGCGGCCGCCGAC
GGCGCGCGGCTGGAGCGGCGGGAGTTCTCCCTGTCGTCCACGGATCTCACCCACTCGCCCGCTGGCACCGTAAGCCTCTC
CCTCGCCCTCCGCTCCGGCCGCGGCGACGCGTGCATCACGGAGCCATCGGATCGCGCCGCGACGGGGCCGTCGATCACGT
CGGAGGTGGTCATCCTTGAGCCGCCGGCGCCGCCGGTGGACTACTTGGGTATCGAGTTCCCTGACCTCAACACGGCCAAA
GAGAACGACGACATGGCCGTCCAGTACCTGCCGTTCTTGCACCTCGGAGTGGCGCCGTTTGACGCCATGGAGATGATCAC
GAGCCCAGGCGGCGAGAATTTGATGCCGGTGTCCTCGGACGGAAGCAAGAACGCCTCGACGACCACCACGACCAGTGACG
ACAGGGCGATCGATGTCTCCTCCTCGGCGGCGACAGAGAAGCCGCATCGGCACGACGGCGCCCACGAGGCCACCGTGTCG
GCGCCGATGTGCTGCGACGCGCCCGACACGCCGACGTCCAACGGAGGGGCGGCGTCTGGCAAGGAGAAGGTCGGCGTTTT
GAAGTCTCCAATGGCCACGGGCGACGTCATCGACATGGAGGCGGAGCAGAGCGCGATGCAGCGGCAGATCATGGAGATGT
ACGTGAAGAGCATGCAGCAGTTCACCGAGTCGCTGGGCGCGATGAAGCTGCCGATGGAGCTGGACGGAGACGGCGGCGCC
GGGGTCGTCGTCCAGAGGGACGAGAAGAAGCCGGAGGCACAGTCGAGGAAGGACGGGGCGAGGGTGTTCTACGGAAGCAG
AGCATTCTTCTGAAGAAAATTACAAACATTCAGAGAGTGTTCTGAAGACTAGAATTATTCAGAGTGTTGTGATTGTTCAT
----CGATTATTCAGGGTGCGGTTAGATGGTCACT---------AGGTTTTGATTG------------------------
-------------TTCATCGTCGTTGTTGACTTGATCCGTTCG------------TTAGTACGGCATACCTCTAGCTAAG
ACTAACTTGTGGAGTGGCATGGAGTTTTGCGTGTGTCCTGCGGAAGCAGAGCT---TTCTTTCTTCTTCTCCTGAAGAAG
ACTACAATTATTCAAAGTGTTCTGTATAAAAACTGCGGTTATTCAGAG----------TGAGGAAGATCTGATGTCTGCC
TGCA------------------------------------------------AAGGTTTTGATTGTCAATCATCGTTGCT
GCACT------CAATTACAAACTCCCACATTACATGTGATATGTCTACCTAATAAGAGTAACATGTGGAGTGGAATGGAG
TTTCATGTGGGCATCAGCCTGCCAGGCAAGATTGCTTGGTCAGATCTCCTCTGAACTGAACCTTCTTGAGGAGAGAGTGT
GAACACTTGCAGAAAAGCTGCAGATCATTGATCATTGAGGAACATTGAGATAGATCATTGTGAAACTAGTTATATCACTG
CAGAAATAGTTGGCTT--GTGTACTCAAGTACGCCGCTTTTGTTGCCAAATTCTTGCTCC-------TATCCTATGGATG
GTCCCACTCCCACCCACAGCATTGTTTCAGAAGCAAAGGAACCCCATGGTTCAGCTTGTTTCTTGAGCGACGATATAAAT
TGCGGTGGATTAGGTGTGAGCACTCGGGA--TTCCACGCATGGAACAGACGCTTCCACGTACGCAAGCACGCGTGGAGCC
AACCGCGAATCGTTGATGTCGACGTACGTCCGTGCATGAACGCGACCGACGCCTGCTGTGTTCTACCACTTGTCCTCACA
ACAAGTGGCAACGT------------------------------------------------------------------
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>chr3A_458
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----------------------------------------------------------CCATTGGAAGTTTTGTAGGACT
AAATCGTAATCATGGCTTACCATGTGAACAGAGCTAAGAGAAACATAGCTATGCACCACCGACCGATGTGAACTGTCCCC
TTTCCACTGTGAAACTTGGACAG-TTGACACGACCCCATGACACTGCTTACTGCTGAATTTCCCCAGAAATGTTGCTGTC
AAGTCATCCCTCGTCAATGTGGACACACCCAGCTATACTTTT-CTTTTTCTTGAGCCATCATGCGTCTGCATTTCCCTGG
TGATCGATAAACAAGTGCAGCAACAACTACTACACGATGGCGCCATGGCGAGGCCGATGCGTGGCTGACCCGCCGAGGCC
AAGAATTGCGGTGCAAGGGTGTGGACAACAAGCAACGGGTAAAGAGCACACATAGTGGACATGAATGATG-------CAC
CGTGTGCACTCGGCTCCATTTTTCCTCCCTCGCCGGCCACCACCTACTCTCTCCCCCTCCTCAAAGTCCTA--------A
CAATTCCAAAGGGTTAGTGAGAAACTGTCTTCAACTGCAAGCAAGAAACAC-----------------ACTAGAAATCTA
AGGTCCATG------------ATGATCGTCTAGTGATCGACCGGTTCCGTTCCGGCGAGTCGGTCGATAATGGAGCCTGC
CAGA---TTCCGGTACGTGCCGGATCATGTCGGGGGCGGCGGAGGGTTGGAGGACGACGACGGCGAGGAGAGTGGCGGCG
GGTGCTTCTTGGACGTGTACGTGCACGGCGCGCGCGGCATCCACAACATCTGCATCTACGCGGACCAGGACGTGTACGCG
CGCTTCTCGCTCACGTCCAGCCCGGGCCACGCGCCGGCGCTCTCCACGCGCGTGGCTGCCAGGGGCGGCGCCAGTCCGCG
CTTCGACGAGCGCCTTCCGCCGTTGCGCGTCCGTCGGGGCAGGCTCGGCACCGACGCGCTCAAGTGCGAAGTGTTGATGC
GGAGCTGCGCCGAGAGCGTCCTCGAGGACCAGCTCCTCGGGTTCACGCTCGTGCCGCTCGCCCAAGTCGCGGCCACCGAC
GGCGCGGAGATGGAGCGGCGGGAGTTCTCCCTGTCGTCCACGGATCTCACCCACTCGCCCGCCGGCACGGTGAGCCTGTC
CCTCGCCCTCCGCTCCGGCGGAGGCGACCCGTGCATCGCGGGGCCATCGGACCGCGCCGCGGCGGAGCCGTCGATCACGT
CGGAGGTGGTCATCCTCGAGCCCCCAGCGCCGCCGGTGGACTACCTAGGTATCGAGTTTCCTGACCTCAACACAGCCAAA
GAGAACGACGACATGGCCGTCCAGTACCTGCCGTTCTTGCACCTCGGGGTGGCGCCGTTTGACGCCATGGAGATGGTCAC
GAGCCCACGCGGCGAGAATTCGATGCCGGTGTGCTCAGACGGAAGCAAGAACGCCTCGACGACCACCACGACCAGCGACG
ACAGGGCGATCGATGTCTCCTCCTCGGCGGCGACAGAGAAGCCGCATCGGCACGACGGCGCCCACGAGGCCACCGTGTCG
GCACCGATGTGCAGCGGCGCGCCGGACACGCCAACGTCCAACGGAGGGGCGGCGTCTGGCAAGGAGAAGGTCGGCGTTTT
CAAGTCTCCCATGGCCACGGGCGACGTCATCGACATGGAGGCGGAACAGAGCGCGATGCAGCGGCAGATCATGGAGATGT
ACGTGAAGAGCATGCAGCAGTTCACCGAGTCGCTGGGCGCGATGAAGCTGCCGATGGAGCTCGATGGAGACGGCGGCGCC
GGGGTGGTCGTCCAGAGGGACGAGAAGAAGCCGGAGGCAGAGGCGAGGAAGGACGGGGCGAGGGTGTTCTACGGAAGCAG
AGCATTCTTCTGAAGAAAATTACAAACATTCAGAGAGTGTTCTGAAGACTAGAATTATTCAGAGTGTTGTGAAGAGACCT
ACTACGATTATTCAGAGTGAGGAAAATCTGATCTCTTCTTGCAAAGGTATTGATTG------------------------
-------------TTCATCGTCGTTGTTGGCTTGCTTCGTTCG------------T--------------------TAAG
ACTAACTTGTGGAGTGGAATGGAGTTTTGCGTGTGTCCTGCGCAAGCAGAGCCTTCT---------TTCTTCTGAAGAAG
ACTACAGTTATGCAGAGTGTTCTGTATAAAAACTGCGGTTATTCAGAG----------TGAGGAAAATCTGATGTCTGCC
TGCAAAGGCGC-----------------------------------------------------------------TGCT
GCACT------CAATTACAGACTCCCACAGTACATGTGATATGTCTTGCTAACAAGAGTAACATGTGGAGTAGAATGGAG
TTTCATGTGGGCATCAGCCGGCTAGGCAAGATTGCTTGGTCAGATCTCCTCTG-----AACCTTCTTGAGGAGAGAGTGT
GAACACTTGCAGAAAAGCTGCAGATCACTGATCATTGAAGAACATTGAGATAGATCATTGTGAAACTAGTTATATCACTG
CAGAAATAGTTGGCTT--GGGTACTCAAGTATGCTGCTTTTCTTGACAAATTCTTGCTCC-------TATCATATGGATG
GTCCCGCTCCCACCCATAGCATTGTTCCAGAAGCAAAGGAACACCTTGGTTTAGCTTCTTTCTTGACCGACGATATAAAT
TGCGGGCGATTAGGTGTGAGCACTCGGGATTTTTCACTCATGGAACAGACGCTTCCACGTACGC----------------
------GAATCGTTGATGTCGACGTACGTCCGTGCATGAACGCGACCGACACCTGCTGTGTTCTACCACTTCTCCTCACA
AGAAGTGGCAACGTAGCAGCTCTTGTGCCTGACGTTTTTCTCCTTTTTGTTTGCAACTTCCATGGGTTTTCCACGCACGT
GTTGTTGAGATTGAGAAACGCCGATACGATAATTAGTGCTTTTATCAAAACTGTCCCGCCGTTCCCGCGAAATGAAATGT
TGGATGGGCAGACAGGAACCGGCAGACTGAAGCTGACTCTACCCGCAAAAAAAAAAAGAAGAAAGACTGAAGCTGACTCA
AGGGAAGGCAGAACCGCAGAAGAGAACTGCCTAATTCGTTGGATCGAGGCTGAGATTGGTGCAAGGCAGCAATGGAGGCG
CTGGCTCTAGCTCTTCCACACATACAG----------------------------------------------TTGTCCG
CTTTTTCATTTGGGTCGCCCGGTGCGTTCGATGGTGGCCGACCCATTTTGTGACATGTTTGTCTCGACAT-
>SNPs
S-----------------S-S---------------------------------S-S------S----------------
-----S-S------------------------------------------------------------------------
----S-------S---------------------------------------------------------------S-SS
-S----S-S--------S-S-----SS-------S-------S------S--SS------S----S--------------
----------------------------------------S-----S-------------------------------S-
----------S---------------------------------------------------------------------
---------------------------------------------S---------S------------------------
----------S--------------------------------------------------------S------------
--S---------------------------------------S--------SS---------------------------
-------------------S-------------S--------------------------------------S-------
----------------------------------------------------------------------SSSSSSS---
-----------------------------------S--------S--------------------------SSSSSSSS-
-----------S-------------S----S---------SS-SSSS--SSSSSSSSSSSSSSSSSSS--S---S--S--
-----------------------------------S------------S-S-S----SSS-S-SSS-----------S--
S-SSSSS-------S---------S----S--------------------------------S----S----SS------
--------S-----------------------------------------------------------------------
--------S-----------------------------------------------------------------------
----------------------S---------------------------------------------------------
----------S---------------------------------------------------SSS-----------SS--
---------S----------------------S--S--S--S--------------------------------------
---------------------------------S-----------S--S-------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------SSSS-SS----------S--S---
-------------------------S-------------S----------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------SS------S-----------------S------
----------------S-S-------------------------------------------------------------
---------------------------------------------S----------S----------S------------
-----------S------------------------S-S--------------------------S--------------
---S-----------------------------------------------S----------------------------
-----------------S-S------------------------------------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS------S----------S----------S-SSSSSSSSSSSS-------S-S-S-------------
-S----S----SSSSSS------------S----S-S-S----S------------------------------------
----------------------------------------------SSSSSSSSSSSS--S----S-------SS-S-SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S----S-------S-----
-SSS-SSSSSS--------------SS-----S-----------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--S---SSSS-SSSSSSS------------------------------------------SSSSSSS-------------
-------S--SS----------------------------------------S----------------S----------
--------------------------------------------------------------------------------
---------S---------S------------------------------------------S-------------S---
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
----S----------------------------------------S-S-S--------S---------------------
--------S----------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
---------------------S-------S-S--------S------S----------------------S
>forward_1010
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------------------------------GCAACTGCAAAGACTCCACG------------------------------
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>reverse_2806
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-----TGCGCGCAATTACAAACTCC-------------------------------------------------------
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