>input_sequence_51868
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------ATGGACGCCGGCGGTGATGCTACCGAGAGCAAGGAGCATTTTGTCCT
AGTGCACGGTGCCGGCCACGGCGCCTGGTGCTGGTTCAGGCTCCTGCCCCTGCTCCGGGGCTCCGGCCACCGCGTCTCCT
GCGTCGACCTTGCCGGGGCAGCCGGCAGCCGCGTCGACCCCGGCTCTGTCCGGTCGTTCGACGAGTACACCGCGCCGCTC
GTCGACCTCCTGTCCGCGCTGCCGGACGGCGAAAAGGTGACGACAGTAACCATGTACCCACATCCC--------------
-----------------------------------------------ACTGCATCACTCTTTCAGTCTCAGGGGACCAAA
ATATAGCTTTAAACT--ACATTCTTTTAAGAACTACTTTCAACACATATAT---------GTTTTATGATCAGACTTATT
TTGCGTTGCTCTTTATTAGGAAACCACTTTCTATGACTTCCAATAGACTGATGAGACGCGCAACGGCCTAGTGTAACTTC
CCTGGAAAAAAAACCCTTTATAACAAGGCCGCTTGCCAAAACCATCGAAATAAGAAATTGTGTACCTTAGGGAAATTATG
ATAGATGAAAAAATGTGGC---TTTGTGGGATAAAAGTGTATAGTATACCGAGAATCAAAGAAATTTACTCACAATAACA
AGGAAATCTCGTGTTACTGATTGATACTGGCACAATAACAAAACTAATGGTAGCATATTGATTTCCTCAGGTGATTTTGG
TTGGGCACAGCGCAGGAGGGCTAAGTGTGACCCATGCAATGCATTTATTCAGCGAAAGGATTAAGCAGGCAATCTTCATA
GCAGCAACCATGCTCCCGTTTGGCTACCAAACGGAACAAGACATCAAAGATGTGACTGCCTGAACTCTCTTATCATAAGC
TCATTTAAACTCTCATTATGTCCGGTTACAGTAGCAGCTACCATTAGTTCTTCCTTTCAAGAATTTCAGCTGATATTTAA
CAGGGCGTACCTGATTTATCCGAGCTCGGGGACGTGTATGACCTAGCATTTGGTCTTGGAATGGATCACCCGCCAACGAG
TGCAGCACTGCGGCCAGAGTTCCAGCGCATGATCCTGTCCCAGCAAAGCCCCCAAGAGGTTGGTTAATGGAATTGCAACG
CTGAATCATCTGCCGATGTGTTATATGCCATGGTCGTGGCACTGTAACTATAAGATGTTTGTTCAGGACTCTGCGCTTGC
CTCCATCCTGCTCCGTCCATGGCCTGCCGCCTTGAGCGCAGCCAGGTTTGGGAGAGGCGGCGGGGACAGCAGCGCAATCG
ACCAGGTGCGGCGCGTGTACATAACAACGGCAAAGGATTGCATGGTGAAGCCGGAGCAGCAGGAGGCGATGATTCGCCGG
TGGCCACCGGGCAAGGTTGTGGCCATGGACACCGACCACAGCCCCTTCTTCTCCGCACCGGAGCGTCTCTTTCAGCTCAT
CGTCAAGTTACTGTGA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr4A_1_TraesCS4A01G193300
GGGTGCACTGGCAACAATCAATGCTAATTCTGTG-------GTCATGCAAAGACAAAATCATTTGTCCCTTGACTGTAAC
CTTGCCAAGTTCACCTGGAGAGTGGTCTTTAGTGCTCTTAATTTGGTTGGACCTCCTGAAGATGTTCAGGGCTTAATTGG
TGCTTCGTGGACCCTGTGTTTCTCCTGGCCAACGCAAACTAGCTCTAGTGGGGGCTGCTTTG-TGTTGGACCATTTGGAG
GACCAGAGAATCGACATATTTTGAT-AAAAAAATACCCGATGATCATGCACTAGTCATTTTCGGCCTGTGTCATTACCTC
GCCAATTAGGCCATCTTGCAGACAAACCAAGCCTGAGGAAGCATTGAAGAGGCATTGAAGCC------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TGGACAAGCCTTTGAT
TCTTAGCCCGAGGTGTCCGATCGGCAGGAAAGAGTCAAACCACCTGATCATTCCAGGTTGGCATTCATGTGTTTTCTACG
--------------------------------GTGAAGTCGGCATGCATGTACGTGGAACAAGATAAAAAAGGCAC----
-TAGAAATCCACCCAGGAAATAAAGGACAAAACA-CGTGTAGGACAACCCTGAGTGATGCAGGCTATGCAGAGACACCAA
TTCTAGTGCGTACAGTACATATACATACCGTACGTGACAAATGGCGTA---CATACGTAGCCTCTGTCCGTTGGACTTAG
TCTGGCCTTGTCTCCATCGACCGGCTCACGCTGAGTCAATTTTCTCCTTAGGATAGTATATAGGACGTGATGTGCTGTGG
AC------------------ATCTATTTTCCTAAGATTTATGGGCAGGTGCACAAGGGAG---GTAGCAGGTGATTTTCC
TGCATTTGGATTCGCGACTACTGATGTAAGTGCACTATTGCAGTGGCGACTTAGCCAATGCTTCTGGAAATAAACGACAA
GACAAATTGCTTGGCCTCGCCTATATAAATAGCTCGTCATTAAAGGGCATGCAACCGCGGATAGATAGACAGGCGCACAG
ACAATCGTAGTGGTACTACAAGTTATTGACGAGATGGACGCCGGCGGTGATGCTACCGAGAGCAAGGAGCATTTTGTCCT
AGTGCACGGTGCCGGCCACGGCGCCTGGTGCTGGTTCAGGCTCCTGCCCCTGCTCCGGGGCTCCGGCCACCGCGTCTCCT
GCGTCGACCTTGCCGGGGCAGCCGGCAGCCGCGTCGACCCCGGCTCTGTCCGGTCGTTCGACGAGTACACCGCGCCGCTC
GTCGACCTCCTGTCCGCGCTGCCGGACGGCGAAAAGGTGACGACAGTAACCATGTACCCACATCCC--------------
-----------------------------------------------ACTGCATCACTCTTTCAGTCTCAGGGGACCAAA
ATATAGCTTTAAACT--ACATTCTTTTAAGAACTACTTTCAACACATATAT---------GTTTTATGATCAGACTTATT
TTGCGTTGCTCTTTATTAGGAAACCACTTTCTATGACTTCCAATAGACTGATGAGACGCGCAACGGCCTAGTGTAACTTC
CCTGGAAAAAAAACCCTTTATAACAAGGCCGCTTGCCAAAACCATCGAAATAAGAAATTGTGTACCTTAGGGAAATTATG
ATAGATGAAAAAATGTGGC---TTTGTGGGATAAAAGTGTATAGTATACCGAGAATCAAAGAAATTTACTCACAATAACA
AGGAAATCTCGTGTTACTGATTGATACTGGCACAATAACAAAACTAATGGTAGCATATTGATTTCCTCAGGTGATTTTGG
TTGGGCACAGCGCAGGAGGGCTAAGTGTGACCCATGCAATGCATTTATTCAGCGAAAGGATTAAGCAGGCAATCTTCATA
GCAGCAACCATGCTCCCGTTTGGCTACCAAACGGAACAAGACATCAAAGATGTGACTGCCTGAACTCTCTTATCATAAGC
TCATTTAAACTCTCATTATGTCCGGTTACAGTAGCAGCTACCATTAGTTCTTCCTTTCAAGAATTTCAGCTGATATTTAA
CAGGGCGTACCTGATTTATCCGAGCTCGGGGACGTGTATGACCTAGCATTTGGTCTTGGAATGGATCACCCGCCAACGAG
TGCAGCACTGCGGCCAGAGTTCCAGCGCATGATCCTGTCCCAGCAAAGCCCCCAAGAGGTTGGTTAATGGAATTGCAACG
CTGAATCATCTGCCGATGTGTTATATGCCATGGTCGTGGCACTGTAACTATAAGATGTTTGTTCAGGACTCTGCGCTTGC
CTCCATCCTGCTCCGTCCATGGCCTGCCGCCTTGAGCGCAGCCAGGTTTGGGAGAGGCGGCGGGGACAGCAGCGCAATCG
ACCAGGTGCGGCGCGTGTACATAACAACGGCAAAGGATTGCATGGTGAAGCCGGAGCAGCAGGAGGCGATGATTCGCCGG
TGGCCACCGGGCAAGGTTGTGGCCATGGACACCGACCACAGCCCCTTCTTCTCCGCACCGGAGCGTCTCTTTCAGCTCAT
CGTCAAGTTACTGTGACCACTTGTACACCATGCATGCACTGTCTGGGAGACGCCTAGCTGCTCCTGCTCTTGTATTCTCC
ACTTCTCCAGTCTTCACTGTGTGATGTTACTTGCATGCCAATTAAGTTATCAACAAGGCTG---TAAAGTTCCAGATGTA
CCACGCGTGAATATATCATGGTCTAAAACCAGAAATTAACACCGCAAAACATCCTCCGATAAGTTAGCACGTCCGTCAGG
GCCAAATGCCAAACACAATGCAGGGAGGAGAGAAACCAGCTGGTCCACACGCTATATCCTGCCATTTTACATGCAAGATA
TGCAGAGAGCACCTGGCATGGCATCCATTTATAGTAGACCTCAATGGACGACCTGCTTGGTTTTGACATTTGGAACTGGC
CGCACAAATGCAGTTGTCCCGGTGATTGGTACAGAGAGGTAATGATGTACTCAATAGGCAGATACTGAACGGGCATGGCA
GGGGAGCATTTTGTGCTTGTTCATGGGGAAGGTCATGGAGGGTGGTGCTGGTTCAAGCTCCGGTGGCTCCTTGAGGGCTC
CGGCTACCAGGTGACCTGCATAGACCTTGCTGGAAGTGGCGTAGACCCCACCGACCCCAACACTGTCCGGTCATTCGACC
AGTATGACAAGCCGCTCCTGCGCCTCATCTCCGCCTTGCCGGAGGGCGAGAAGGTAGGATCCTGCAGTATTGCTGCTAAT
TTATAAACTACTTATGGCCACAAAGTGCTGAAGGTAGTTTGTTGCTTTGTTGTGATTGTGAAGCTGCTTATAATTAGGGA
CATGTGTCCAAAATGGCGAAGAGTTATAGGCGATTTGGTTTACCTTTTTAAACTCATTTTGATCGAATTTCAGGTGATTC
TCATTGGGCATGGCAGTGGAGGGCTGAGTGTGATTCACGCAATGCATGAATTCGTTGACAGAATTAAGCAAGCAATATTT
GTGGCAGCTGCTATGCTGCCATTTGGACTTCAGACTGATGAAGATAAGAAAGATGTATG
>chr4D_1
GGGTGCACTGGCAACAATCAATGCTAATTCTGTGCACTGAGGTCATGCAAAGACAAAATCATTTGTCCCTTGACTTTAAT
CTTGCCAAGTTCACCTGGAGAGTGGTCTTTAGTGCTCTTAATTTGGTTGGACCTCCTGAAGATATTCAGGGCTTAATTCG
TGCTTTGTGGACCCTGTGTTCCTCCTGGC-----------------------------------GTTGGACCATTTGGAA
CACCAGAGATTCGACATATTTTGATAAAAAAAATACCCGATGATCAGGCAATAGTCGCCCCTCTTGTGTTTCAATCTGTA
CATTTCGTTTGTTTTGCATAAAAAGTTTGCTCTACCATGGTGTAGTGGCACTGTGGCCA---------------------
--------------------------------------------------------------------------------
------------------AAAATCGATGAGGAGGCTTGTTGTTTTAAAAAATGAATCAATACGTTGGACAAACCTTTGAT
TCTTAGCCCGAGGTGTCCGATCGGCAAGAAAGAGTCAAACCACCTGATCATTCCAGGTTGGCATGCATGTGTTTTCTAGA
GTGAAGTCGGCAGGTTACGCTCAAAAAATAGAGTGAAGTCGGCATGCATGTACGTGGAACAAGATAAAAACGCGCTACTA
GTAGAAATCCACCCACGAAATAAAGGACAAAACA-CGTGTGGTACAACCCTGGGTGATGCAAGTTATGCGGAGGCCGCAA
TTCTAGTGC-----GTGCATAGACGTACCGTACGTGACAAATGGCGTA---CATACATAGCCTCTGTCCGTTGGACTTAG
TCTTGCCTTGTCTCCATCGACCGGCTCACACTGAGTCAATTTTTTCCTTAGGATA---TATAGGACGTGATGTGCTGTGG
AC------------------ATCCATTTTCCTAAGATTTAT--------------GGGAG---GTAGCAGGTGATTTCCC
TGCATTTAGACTCGCGACTACTGATGTAAGTGCACTATTGCAGTGGTGACTTGGCCAATGCTTCTGGAAATAAACAACAA
GACAAATTGCTTGGCCTCGCCGATATAAATAGCTCGTCACTAAAGGGCACGCAACCGTGGATAGATAGGCAGGCGCACAA
ACAATCGTAG---TAGTACAAGTTATTGACGAGATGGACGCCGGCGGCGATGCTACCGAGAGCAAGGAGCATTTTGTCCT
AGTGCACGGTGCCGGCCACGGCGCCTGGTGCTGGTTCAGGCTCCTGCCCCTGCTCCGGGGCTCCGGCCACCGCGTCTCCT
GCGTCGACCTTGCTGGGGCAGCCGGCAGCCGCGTCGACCCCGGCTCTGTCCGGTCGTTCGACGAGTACACCGCGCCGCTC
GTCGACCTCCTGTCCGCGCTGCCAGACGGCGAAAAGGTGACGACAGTAACCGTGTACCCACACCCCCTTCTTGTAATTGG
ATGCTTGCATGCATGCACTAGTTTTTTTTCTTCTTCTTTTT--GGTTACTGCACTACTCTTTCAGTCTCAGGGGAACAAA
ATATAGCTTTAAACTGTACATTCTTTTAAGAATTACCCCCTCTGTAAGCTTTTATAAGCCGTTTTATGATCACACTTATT
TTCGGTTGCTCTTTATTAGAAAACCACTTTCTATGACTTCCAACAGACTGATGAGCCGCACAATGGCCTAGTGTAACTTC
CCT--AAAAAAAACCCTTTATAGCAAGGCCGCTTGCCAATTCCGTCGAAATAAGAAATTGTGCGCCTTATGGAAATCATG
ATAGATGAAAAAATGTGGC---TTTGTGGGATAAAAGTGTATAGTATACTGAGAATCAAAGAAATTTACTCACAATAACA
AGGAAATCTCGTGTTACTGATTGATACTAGCACAATAACAAAACTAATGGTAGCATATTGATTTCCTCAGGTGATTTTGG
TTGGGCACAGCGCAGGAGGGCTAAGTGTGACCCATGCAATGCATTTATTCAGCGACAGGATTAAGCAGGCAATCTTCATA
GCAGCAACCATGCTCCCGTTTGGCTACCAAACGGAACAAGACATCAAAGATGTGACTGCCTGAACTCTCTTATCATAAGC
TCATTTAAACTCTTATTATGTCCGGTTACAGTAGCAGCTACTATTAGTTCTTCCTTTCAAGAATTTCAGCTGAAATTTAA
CAGGGCGTACCTGATTTATCCGAGTTCGGGGACGTGTATGACCTAGCATTTGGTCTTGGAATGGATCACCCGCCAACGAG
TGCAGCACTGCGGCCAGAGTTCCAGCGCATGATCCTGTCCCAGCAAAGCCCCCAAGAGGTTGGTTAATGGAATTGCAACG
CTGAATCATCTGCCAGTGTGTTATATGCCATGGTCGTGGAACTGTAACTACAAGATGTTTGTTCAGGACTCTGCGCTTGC
CTCCATCCTACTCCGTCCATGGCCTGCCGCCTTGAGCGCAGCCAGGTTTGGGAGAGGCGGCGGGGACAGCAGCGCGATCG
ACCAGGTGCGGCGCGTGTACATAACAACGGCAAAGGATTGCATGGTGAAGCCGGAGCAGCAGGAGGCGATGATTCACCGG
TGGCCACCGAGCAAGGTTGTGGCCATGGACACCGACCACAGCCCCTTCTTCTCCGCACCGGAGCGTCTCTTTCAGCTCAT
TGTCAAGTTACCGTGACCACTTGTACACCATGCATGCACGGTCTGGGTGACGCCTAGCTGCTCCTGCTCTTGTATTCTCC
ACTTCTCCAGTCTTCACTGTGTGATGTTACTTGCATGCCAATTAAGTTATCAACAAGGCTG---TAAAGTTCCAGATGTA
CCACGCGTGAATATATCATGGTCTAAAACCAGAAATTAACACCGCAAAACATCCTCCGATAAGTTAGCACGTCCATAAGG
GCCAAATGCCAAACACGATGCAGGGAGGAGAGAAACCAGCTGGTCCACACGCTATATCCTGCCATTTTACATGCAAGATA
TGCAGAGAGCACCTGGCAT-GCATCCATTTATAGTAGACCTCAATGGACGACCTGCTTGGTTTTGACATTTGGAACTGGC
CGCACAAATGAAGTTGTCCCGGTGATTGGTACAGAG--GTAATGATGCACTCAATAGGCAGATGCTGAACGGACATGGCA
GGGGAGCATTTGGTGCTTGTTCATGGGGAAGGGCATGGAGGGTGGTGCTGGTTCAAGCTCCGGTGGCTCCTTGAGGGCTC
CGGCTACCAAGTGACCTGCATAGACCTTGCCGGAGGCGGCGTAGACCCCACCGACCCCAACACTGTACGGTCATTCGAGC
AGTATGACAAGCCGCTCCTGCGCCTCATCTCTGCCTTGCCGGAGGGCGAGAAGGTAGGATCCTGCAGTATTGCTGCTAAT
TTATAAACTACTTATGGCCACAAAGTGCTGAAG---GTTTGTTGCTTTGTTGTGAAGCTGCTTAGGGACAT---------
--TGTGTCCAAAATGATGAAGAGTTATAGGCGATTCGGTTTACCCTTTGAAACTCATTTTGATCGAATTTCAGGTGATTC
TCATTGGGCATGGCAGTGGAGGGCTGAGTGTGATTCACGCAATGCATGAATTCGTTGACAGAATTAAGCAAGCAATATTT
GTGGCAGCTGCTATGCTGCCATTTGGACTTCAGACTGATGAAGATAAGAAAGATGTATG
>chr4B_1
GGGTGCACTGGCCACAATCAATGCTAATTCTGT-------GGTCATGCAAAGACAAAATCATTTGTCCCTTGACTTTAAT
CTTGCCAAGTTCACCTGGAGAGTGGTCTTTAGTGCTCTTAATTTGGTTGGACCTCCTGAAGAT-TTCAGGGCTTAATTAG
TGCTCTGTGGACCCTGTGTTCCTCCTGGCCAACGCAAACTAGCTCTAGTGGGGGGCTGCTTTCTGTTGGACCATTTGGAA
GACCAGAGATTCGACATATTTTGAT--AAAAAATACCCGATGATCATGCAATAGTCGCCCCTCTTGTGTTTCAATCTGTA
CATTTCGTTTGTTTTGCATAAAAAGTTTGCTCTACCATGGTGTAGTGGCACTGTGGCCAAAACTACTATGTTTTGCATGC
TGCTCGTTTGTTCTGAACCAGGGACCCGCATGGTTACCTGGTTTTGCTTTCAGTTTCTAGTTCCAGTTTGATGTTTGCTC
ACTATGGTTTCTCTAATGAAAATCGATGAGGAGGCTTGTTGTTTAAAAAAATGAATCAATACGTTGGACAAGCCTTTGAT
TCTTACCCCGAGGTGTCCACTCGGTAAGAAAGAGTCAAACCACCTGATCATTCCAGGTTGGCATGCATGTGTTTTCTAGC
A--------------------------------TGAAGTCGGCATGCATGTACGTGGAACAAGATAAAAA-GGCAC----
-TAGAAATCCACCCAGGAAATAAAGGACAAAACATCGTGTAGTACAGCCCTGAGTGATGCAAGTTATGCGAAGGCAGCAA
TTCTGGTGC-----GTGCATAGACATACCGTACGTGACAAATGGCGTATTACATACGTAGCCTCTGTCTGTTGGACTTAG
TCTGGCCTTGTCTCCATCGACCGGCTCACACTGAGTCAATTTTTTCCTTAGGATAGTATATAGGACGTGCTGTGCTGTGG
ACTGGACATCTATTTTTCCTATCTCTTTTCCTAAGATTTATGGGCAGGTGCACACGGGAGGCAGTAGCAGGTGATTTTCC
TGCATTTAGACTCGCGACTACTGATGTAAGTGCACTATTGCAGTGGTGACTTAGCCAATGCTTCTTGAAATAAACAACAA
GACAAATTGCTTGGCCTCGCCTATATAAATAGCTCGTCACTAAATGGCACGCAACCGCAGATAGATAGGCAGGCGCACAA
ACAATCGTAG---TACTACAAGTTATTGACGAGATGGACGCCGGCGGCGATGCTACCGAGAGCAAGGAGCATTTTGTCCT
AGTGCACGGTGCCGGCCACGGCGCCTGGTGCTGGTTCAGGCTCCTTCCCCTGTTCCGGGGCTCCGGCCACCGCGTCTCCT
GCGTCGACCTTGCTGGGGCAGCCGGCAGCCGCGTCGACCCCTGCTCTGTCCGGTCGTTCGACGAGTACACCGCGCCGCTC
GTCGGCCTCCTGTCCGCGCTGCCAGACGGCGAAAAGGTGACGACAGTAACCGTGTACCCACACCCCCTTCTTGTAATTGG
ATGCTTGCATGCATGCACTAGTTTTTCTTTTTCTTTTTTTTTTGGTTACTGCACTACTCTTTCAGTCTCAGGGGAACAAA
ATATAGCTTCAAACT--ACATTCTTCTAAGAACTACCCACTCTGTAAGCTTTTATAAGACGTTTTATGATCACACTTATT
TTCCATTGCTCTTTATTAGAAAATCACTTTCTATGACTTCCAACAGACTGATGAGCCGCACAATGGCCTAGTGTAACTTA
CCT--AAAAAAA--CCTTTATAACAAGGCCACTTGCCAATTATGTCGAAATAAG-AATTGTGTATCTTATGGAAATCATG
ATAGATGAAAAAAAATGTGGTTTTTGCGGGATAAAAGCGTATAGTATACTGAGAATCAAAGAAATTTACTCACAATAACA
AGGAAATCTCGTGTTACAGATTGATACTAGCACAGTAACAAAACTAATGGTAGCATATTGATTTCCTCAGGTGATTTTGG
TTGGGCACAGCGCAGGAGGGCTAAGTGTGACCCATGCAATGCATTTATTCAGCGACAGGATTAAGCAGGCAATCTTCATA
GCAGCAACCATGCTCCCGTTTGGCTACCAAACGGAACAAGACATCAAAGATGTGACTGCTTGAACTCTCTTATCATAAGC
TCATTTAAACTCTTATTATGTCCGGTTACAGTAGCAGCTACCATCAGTTCTTCCTTTCAAGAATTTCAGCTGAAATTTAA
CAGGGCGTACCTGATTTATCCGAGCTCGGGGACGTGTATGACCTAGCATTTGGTCTTGGAATGGATCACCCACCAACGCG
TGTAGCACTGCAGCCAGAGTTCCAGCGCATGATCCTGTCCCAGCAAAGCCCCCGAGAGGTTGGTTAACGAAATTGCAACG
TTGAATCATCCGCCGATGTGTTATACGCCATGGTCGTGGCACTGTAACTATAAGATGTTTGTTCAGAACTCTGCGCTTGC
CTCCATTCTACTCCGTCCATGGCCTGCCGCCTTGAGCGCAGCCAGGTTTGGGAGAGGCGGCGGGGACAGCAGCACAATCG
ACCAGGTGTTGCGCGTGTACATAACAACGGCAAAGGATTGCATGGTGAAGCCAGAGCAGCAGGAGGCGATGATCCGTCGG
TGGCCACCGAGCAAGGTTGTGGCCATGGACACCGACCACAGCCCCTTCTTCTCCGCACCGGAGCGTCTCTTTCAGCTCAT
CGTCAAGTTACTGTGACCACTTGTACACCATGCATGCATGGTCTGGGTGACGCCTAGCTGCTCCTGCTCTTGTATTCTCC
ACTTCTCCAGTCTTCACTGTGTGATGTTACTTGCATGCCAATTAAGTTATCAACAAGGCTATGTTAAAGTTCCAGATGTA
CCACGCGTGAATATATCATGGTCTAAAACCAGCAATTAACACCGCAAAACATCCTCCGATAAGTTAGCACGTCCATAAGG
GCCAAATGCCAAACACGATGCAGGGAGGAGAGAAACCAGCTGGTCCACGCGCTATATCCTGCCATTTTACATGCAAGATA
TGCAGAGAGCACCTGGCAT-GCATCCATTTATAGTAGACCTCAATGGACGACCTGCTTGGTTTTGACATTTGGAACTGGC
-GCACAAATGCAGTTGTCCCGGTGATTGGTACAGAG--GTAATGATGCACTCAATAGGCAGATGCTGAACGGGCATGGCA
GGGGAGCATTTGGTGCTTGTTCATGGGGAAGGGCATGGAGGGTGGTGCTGGTTCAAGCTCCGGTGGCTCCTTGAGGGCTC
CGGCTACCAAGTGACCTGCATAGACCTTGCCGGAGGCGGCGTAGACCCAACCGACCCCAACACTGTACGGTCATTCGAGC
AGTATGACAAGCCGCTCCTGCGCCTCATCTCCGCCTTGCCAGAGGGTGAGAAGGTAGGATCCTGCAGTATTGCTGCTAAT
TTATAAACTACTTATGGCCACAAAGTGCTGAAGGTAGTTTGTTGCTTTGTTGTGAAGCTGCTTAGGGACAT---------
--TGTGTCCAAAATGATGAAGAGTTATAGGCGATTCGGTTTACCTTTTGAAACTCATTTTGATCGAATTTCAGGTGATTC
TCATTGGGCATGGCAGTGGAGGGCTGAGTGTGATTCACGCAATGCATGAATTCGTTGACAGAATTAAGCAAGCAATATTT
GTGGCAGCTGCTATGCTGCCATTTGGACTTCAGACTGATGAAGATAAGAAAGATGTATG
>SNPs
---------------------------------------------------------------------------S---S
---------------------------------------------------------------S--------------S-
-----S--------------S---------------------------------SSSSS--S-----------------S
---------S----------------------------------------S-----SSSSSSSSSS---S---S-SSS-S
SSSSSSSSSSSSS-SSSSS-S-S-SSSSSSS-SSSSSSSSSSSSSSSSS-SSSSSSSS-SSS------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-------------------------------------S-------------SS
----------------------------------------------------------------------S---------
------------------------------------------S------------------S-S-----S---S--S---
---------SSSSS--S----S----------------------------------------------------------
-----------------------------S-------------S------------------------------------
------------------------------------------------------S-------------------------
-------S--S-----------------------------------S----------------------------S----
---------------------------------------S---------S------------------S----------S
----------SSS----------------------------------S--------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
-----------------------S---------------------------S----------S-----------------
-----------------------------------------------------SS--------------------S----
------------------------------------SSS-SSSSS-SSSS----------------------S-------
--S----------------S-----------------------S-----------S---S---S----------------
---SS----------------------------------SS--S-------------------------S------S---
-------------------------------------------------S------------------------------
----------------------------S---------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
-------------S-----------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
---------------------------------------S-------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-S---
----------------S---------------------------------------------------------------
-------------------S------------------------------------------------------------
------------------------------------SS---------S---------------S----------------
-----------S--------------------S-----------------------------------------------
---------S--------------------S---S-S-----------------------------S-----------S-
--------------------------------------------------------------------------------
-------------------------------------------------------SSS--SSSSS-SSS--SSSSSSSSS
SS-------------SS------------------S------------S-------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_356
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TGCAGACAAACCAAGCCTGA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_1724
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TAGACTGATGAGACGCGCAA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_363
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AAACCAAGCCTGAGGAAGCA-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_1744
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CGGCCTAGTGTAACTTC
CCTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_1574
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GTACCCACATCCCACTGCAT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_3359
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CC
AGTATGACAAGCCGCTCC--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
