>input_sequence_51816
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-------------------------------CGGCCGAACGGTCAGCAGCGCAGCCACTCGCTC----GCCAAGAAAGCA
GGAGCGCGACGCGGGCCGCAGCCATGAGCGGCGCGGAGCAGCAGCAGCAGGGGGAGATCGCCGTCGTCGTCGCCAAGAGG
CGGAGGGACGGCA---AGGAGGCTGCTGCGGCGGCGGAGGA---GGTGGAGCCGCTATCGGCGCTGGCGGACGACGTGCT
GCTGCAGATCCTCGGACGCCTCGAGGGGGACCCGCGCGACTGGGCGCGCGCGTCCTGCGCGTCCCCGCGCCTCGCCGCGC
TCCTCCGGGCCGCCTGCTTCCCGCCGCGCCTCTCCCGGGCGCTCCCCGCCGAGCTGCTCCCCGCGGACGGGGCGCCCGCC
GCGTGGGCCGCGCTCCACAAGATGTCCGTCTGCTGCCCCGGCCTCCTCCGCGCCGGGATCCTCCTCGAGCCCTCCGACGA
CTTCGGCCTCGAGCTCGACATCGGCCCCGACCTCACCGTCCCGGCCTCCTCGTCATCCTCCTCCTCATCCCTCGAGCCCA
CGGCCACCTCCTCGCTCCAGCCGCCCAAGGCCGCCGCGCAGGCCGAGCCGAGACCCAGCGACGGCACGCTGGCCGCCACG
GACGCCGCCGCGTGGTCCCTCTACGATGACCTGTACCTGGACGCGGCCTACGACTGCTCCGAGACGCAGATCGCCGCCGC
GCCCGCGCCGGCCGCAACGGCAGAGGAGGAGGAGGC------GCCGCCGGCAGCCAATGCCGTCCGGCGCGGCGTGGTGT
CAGGTACCCGTCGGCGGGCGCGGCGGTGGCTGGGGCCCGTGGGCTCGCACCTGGCGTCGGGGTCCTGGACGCTGAGCCGC
GAGCAGGGCAACAAGCTGCTGGCCAGCCGGTTCCGCGGCGACCGGCTGTACATCTGCGAGTGGCCCGGGTGCGTGCACGC
GGAGGAGCGGCGCAAATACATGGTGTTCCGCGGCGTGTTCCAGGACTTCGCGCGCTCCCAGGTGCGGCGCGCGCTGCGGG
ACACGCGGCGCCCCACCGTGGCCGTGGACTGCGCCTTCTGCGGATGCACGGAGGCGTGGGACCTCTACTCCGCCTTCTGC
CTCCGCAGCTTCTACGGGTACCACGACGACGGCGAGCCCGTGGTGCGCGCCTACGTCTGCGAGAACGGCCACGTCGCCGG
CGCCTGGACCGAGCGCCCGCTCTACGCCTGACCGCTTGCTCCAGTCCGGTCCGGCGGCGACGACATGACAGGCAGGCATG
CCACGCTCTGGCATTGCTAGATCGATCGCCAAGCAGCATAGCTCGCAGGCTCTCACGAGAA-TTCGGTGCGTGCATGGCC
GCGATGTGGATCTCGGCGAGCTCCGAGTGATGCATCTGTTCTCTTGTATCTTTTCATCCGATGTAGTA---ACTTTGGCT
GATGCTTAGCATAAAAGAAGAATGAAATGGA------TTTTTTTAC----------------------------------
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>chr1B_1_TraesCS1B01G244300
ATTTTGAGATGTAATTAT--------------------------------------------------------------
--------------------------------------ATTACTATATGTTCTTCTCTCCTAGGAGTGAGAGTGGTCTTC
TAATCCGTGTTTGCACAACTCATAACATTATATTTCTCTTTTGTGTTGTTTGTTGTTGCCTTTTT-ATCAACCTAGCATG
TGTCAATCTGCTAGGGTGATTGTAGTAATATTTTGA----AGTAATGCTAGAGCTACAGAAAAACAATTACGGATTTAAC
GGACTTGGTTAGATGAAATATTAGGATTGAAGCTAAGGAGGAGGGAGGGGCCCCACCCCTTCGAAATTAGAGGGGGGGGA
GGGGGGTATTCTCGAAACAGGGAGGAGAGAATTATTTGGAAGCTTTTGTAAAACGAGCGTAGATCGCCCATAGGTCTAGG
ATTATGGTTTGAGATATC---GTGCACCTATGTGATTGTAATAGCGTGTGTCATTATATCT-------------------
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-------------------------------------------------------GTATTTATTAAAAATCTTGTCTACA
ACGTATCTTATGTGAAGCGCACGCTGGGTACCCTTTGAGATAAATGTTTATCCGTGTGACAATATTTTTGAGATGTACTG
TAATTGTGTTCTCTCCCTTTAAACACCGATATGCATAAGCACCCGACGCTGCACATGGCCTTATGAGGGCTGGTCC-TTT
TTTTAGCAGGAGGTGAGTT-TGTTTTTTC-----------------TAGCAGCCGGTCAAGTGTGTGGGTGTGATGGAGT
TGTGTTGT------------------------------------------------------------------------
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--------------GCCTGCATGCATGGTGTTCCTGGGACTGGGAGGAGTGAGAGACA----------------------
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-------------------------------------------------------------------------ATGCTCT
GTTGGAAGAATGTTGAGCCCCTCGTTTCAATCGAATAAAATAATCGTGGAGGTTGACACACGGGGGCCGAGAGTGACCGC
TCATCGTTCGGCACACCCGCGCAGCCTCCATCCACACGTTGGGATTGCAGGCAAGAGTTTTGTAACGACAAGAAAAGCAT
CATCTCATCCGTCTCCCGCAGCCCCCAGCCCCCAGCCCAGGCCACCACCACA-----GAAAAACGGACCCAACACAACCC
GAAAGTTAAACCAGCCTCGCAA----CCGAACGGCCGAACGGTCAGCAGCGCAGCCACTCGCTC----GCCAAGAAAGCA
GGAGCGCGACGCGGGCCGCAGCCATGAGCGGCGCGGAGCAGCAGCAGCAGGGGGAGATCGCCGTCGTCGTCGCCAAGAGG
CGGAGGGACGGCA---AGGAGGCTGCTGCGGCGGCGGAGGA---GGTGGAGCCGCTATCGGCGCTGGCGGACGACGTGCT
GCTGCAGATCCTCGGACGCCTCGAGGGGGACCCGCGCGACTGGGCGCGCGCGTCCTGCGCGTCCCCGCGCCTCGCCGCGC
TCCTCCGGGCCGCCTGCTTCCCGCCGCGCCTCTCCCGGGCGCTCCCCGCCGAGCTGCTCCCCGCGGACGGGGCGCCCGCC
GCGTGGGCCGCGCTCCACAAGATGTCCGTCTGCTGCCCCGGCCTCCTCCGCGCCGGGATCCTCCTCGAGCCCTCCGACGA
CTTCGGCCTCGAGCTCGACATCGGCCCCGACCTCACCGTCCCGGCCTCCTCGTCATCCTCCTCCTCATCCCTCGAGCCCA
CGGCCACCTCCTCGCTCCAGCCGCCCAAGGCCGCCGCGCAGGCCGAGCCGAGACCCAGCGACGGCACGCTGGCCGCCACG
GACGCCGCCGCGTGGTCCCTCTACGATGACCTGTACCTGGACGCGGCCTACGACTGCTCCGAGACGCAGATCGCCGCCGC
GCCCGCGCCGGCCGCAACGGCAGAGGAGGAGGAGGC------GCCGCCGGCAGCCAATGCCGTCCGGCGCGGCGTGGTGT
CAGGTACCCGTCGGCGGGCGCGGCGGTGGCTGGGGCCCGTGGGCTCGCACCTGGCGTCGGGGTCCTGGACGCTGAGCCGC
GAGCAGGGCAACAAGCTGCTGGCCAGCCGGTTCCGCGGCGACCGGCTGTACATCTGCGAGTGGCCCGGGTGCGTGCACGC
GGAGGAGCGGCGCAAATACATGGTGTTCCGCGGCGTGTTCCAGGACTTCGCGCGCTCCCAGGTGCGGCGCGCGCTGCGGG
ACACGCGGCGCCCCACCGTGGCCGTGGACTGCGCCTTCTGCGGATGCACGGAGGCGTGGGACCTCTACTCCGCCTTCTGC
CTCCGCAGCTTCTACGGGTACCACGACGACGGCGAGCCCGTGGTGCGCGCCTACGTCTGCGAGAACGGCCACGTCGCCGG
CGCCTGGACCGAGCGCCCGCTCTACGCCTGACCGCTTGCTCCAGTCCGGTCCGGCGGCGACGACATGACAGGCAGGCATG
CCACGCTCTGGCATTGCTAGATCGATCGCCAAGCAGCATAGCTCGCAGGCTCTCACGAGAA-TTCGGTGCGTGCATGGCC
GCGATGTGGATCTCGGCGAGCTCCGAGTGATGCATCTGTTCTCTTGTATCTTTTCATCCGATGTAGTA---ACTTTGGCT
GATGCTTAGCATAAAAGAAGAATGAAATGGA------TTTTTTTACAACAACATTGGCGCCATATATATG---TACCCTG
ACGAGTTCAGATTCACAATCCGCGTCCTATGCAGC-TATGTTCTGCAATTA--GAATACCAATTACGCTCCACACTTGCT
AGG---------------TTAGGGTAGGGTTGATCATCCTTGTTGGCATACTGGGCTTTTGAATCCTCCCCTTTCCGATT
ATTATCTTAAGCCACAACTTGCAAGTTAGGGCTGGCATCAAGAGGATCCATGCGTGTCAGAGATTACGAATATGATAATC
AAAAT---TACCCAAAATGACATCAAGTTAGG------------------------------------------------
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-----------------------------------------------------------------------------GCT
CGGTGACCTGTTGGTTCGTACGGATGGATGATAGTGGGGAGGAGATATGAGATGCCTTTCATCTTTCTGTGGCCCTTCGT
TATCCACAGATTTGCTGTG---GAGATTGCAGATATTTGATGCGTTGCTTCTCCGAGGTTTC-TTTTTTCTT---TTTTG
AGTAATTCCTTAATGCTCCCTCCGTCCGGAAATACTTGTCATCAAAATGAATAAAAGGGGATGTATCTAGATGTATTTTA
GTTCTAGATACATCCCCTTTTGTCCATTTTGATGACAAGTATTTTCGGACGGCGGGAGTACTTAATAAGGCATACAATCA
CGATACAACCTGCGTTAGAAAAGCGAACCAACATGTGGTTGGATGGTTAGAGTGACTGTGATATCCCCAGTCTACCAGAG
AAGACATCCCCGTTGACGACGAGGC-------------------------------------------------------
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---------------------------------------------------------GCGTGTTTCGCGCATAAATGAGC
CGCCATATGAATTACAC---------------------------------------------------------------
-----------------------------------CCTAAAGCTCTGAAAATGCCCACTTGATTCTTTGATCTCCTGAAG
AACGACAGCAATCTCAGCACGACCAAAACCGTCCGTGTCCCACCAAGGCGAGATACGCCATCCAAGTTGAGAAGCGGCTT
GTCTCCAACCCGGTGCTCTCGGAATTTTTTGCTTCAGGGATTCTCAGTCCTCCCAAGTTGCCGCAGCAACATGCTCACCA
ATGGTCCTTACACGACCGCGCGATTCCCTGCTTTAGACCACTCGGCTACAGA
>chr1A_1
ATTTTGAGATCCAATTAT--------------------------------------------------------------
--------------------------------------ATTACTACATGTTCTTCTCTCCAGGGAGTGAGAATGGTCTTC
TAATCCGTGTTTGCACAACTCTTAACATCATATTCCTCTTTTGGGTGGTTTGTTGTTGCCTTTTT-ATTAACCTAGCGTA
TGTCAGTCTACTAGGGTAATGCAATTATATTTTAAAATAGAGTGATACTAGATCTATAGGGAAACAATTACGGATTTAAC
AGGTTTCGTTACGTGGAGGATTAGGATTGGA----------------GGGCCCCGCCCCTCTGAAATTAGCCA-GGGGGG
GGGG---------------------------GTATTTGGAAGCTTTTGTAAAACGAGCATAGATCACCCGTAGGTCTAGA
ATTATCGTTTGAGATACTATTGTGCACATGTGTGATTGTAATACCGTGTGCCATTCTATTACTACATGTTCTTCTCCCTA
GGTAGCGAGAATGGTCTTCTAATCCGTGTTTGCACAACTCTTAACATCATATTCCTCTTTTGGATTGCTTGTTGTTGCCT
TTTTA-TTAACCTAGCGTGTGTCAATCTGCTAGGGTGATGCAATTATGTTTTGAAATAGAGTAATGCTAGAGCTATAAGT
AAACATTTGCAGATTTAACAGGTTTTGTTACACGGAGGGTTAGGATTGAAGCCAGGGCAGAGGGAGGGGCCCCACCCCTT
TGAAATTATCAAGGGGGGGGGG----------------------------------------------------------
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>chr1A_14
GGGGGGAGAGAATTATTTGGAAGCTTTTGTAAAATGAGTGTAGATCACCCGTCGGTCCAAAATTATCGTTTGAGACACTA
TTGTGCACCTATGTGATTGTAATAGTGTGTGCCATTGTATTACTACATGTCCTTCTCTCCATGGAGCGAGAATGGTCTTC
TAATCCGTGTTTGCACAACTCTTAACATCGTATTCCTCTTTTGGGTTGTTTGTTGTTGCCTTTTTTATTAACCTAGCATG
TGTCAATC-GCTAGGGTGATGCAATTATATTTTGAAATAGAGTAATGCTACAGCTACACAAAAACAATTACAGATTTAAC
AGGTTTGGTTACGTGGAGGATTAGGATTGAAACTAGGGCGGATGGAGGGGGT-----CATTTGAAATTAGCACGGGGAGG
GGGG---------------------------TTATTTGGAAGCTTTTGTAAAACGGATGTAGATCACCCGTCGGTCCAGA
ATCATCGTTTGAGACACTATTATGCACCTATGTGATTGTAATAGCGTGTGCCATTGTATTACTACATGTTCTTCTCTCCA
GGGAGCGAGAATGGTCTTCTAATCCGTGTTTGCACAACTCTTAACATCATATTCCTCTTTTGGGTTGTTTGTTGTTGCCT
TTTTTCTTCACCTTGCGTGTGTCAATCTGCTAGGGCGATGCAATTATATTTTGAAATAGAGTAATGCTAGAACTACAGGG
AAGTAATTACGGATTTAACAGGTTTGGTTATGTGAAGGATTACGATTGAAGTTAGGGAGGAAGGAGCGGCCTT--CCCTT
TGAAATTAGCAGGGAAGAGAGAATTATTTGGAAGCTTTTGTAAAACGGGCGTAGATCACCCATACCGTAGGTCTAGAATT
GTCATTTGAGATACTATTGTGCGCCTATGATTGTAATAGCGCATGCATTATATTAGTATTTACTAAAAATATTGTATACG
ATGTAGCTTATGTGAAGCGCACGCTGGGTATCCTTTGAGATGAATG-TTATCCGTGTGGCAAGATTTGTTTTGAGA--TG
TAATTATATTCTATCTCTT----------------TAAGCATCCAACACCGCACATGGCCTTATTAAGCCTGATTTTTTC
TTCTAGAAGGAGGTGATTTATTTTTTTCATACCTGGAACTCTTCGATAGAAGTCGGTCAAGTGTGTGGGCGTGATGGAGT
TGTACCTGCATGTTGTGCTGCGTGGTCATGTGAGGCCAACTCCACCGCGCGACCCTATCCTATCCGTTCTTGTCCGTTTG
AGGTAAAACGGACCAATAGCGTAGCCCAGTGCACGGCCTCAGACGGACAAATGTTCGGATTTCGTCCGTTTTCGACCCAT
TCCGGTTCAAACTTGCGCTCGGTTTAAGGTGAAACGGACGCGCGCGGACGGCTTGGACGCACGCCCTTGTCCTCCCTCCC
CCTGGCCCGCCTGTCGGAGACACTAGCAGTCCCTCCGCTTCCAACGCTTCCACCCTCTCTCTCTGTCGCCCCGCCCCGTC
GCCGGCGCCGCCGCTATTCTCCGGCCGTCCCTACCAAACCACTTCTCGACATGGCCGCCACCACGCCCGTGTTGTGGCCG
TAGTTTTGGCCGTCGATCGAAGGTTTGGCCGTCGACGTCTTTGCCCGCCGCAGAGGGGACAGGACCGCCGGCGACGCAGC
ACGGCGTCCTCGGCAGCTCCCGACGAGAGCTCCACAGCGGCCAGTAGCCGGCCGGCAACCACCCCTGCTGCGTCGAGGTG
ATCTTCGCCACCACGCCCGCAAG----GTGTTCGGCATTTTGCCCACAAAGGTATGGACAGTGAAGACGAGTTTTTCTTC
CATCACTTTCTTTGTTCATCGGACGATTCATCGTCGGATGATAAAGATATTGTGGTGGCTGCACTGGTCGTTCACGACCA
CATTCAACGGCAGCTTCCTCGGTACAGGGGGTCACTCCCTGGCCGTGCTCCCAACCTGAACTGCAACAGGGAGAGAGGGC
ACGCCCTGCTCTATGCCGATTACTTTGCCAACACCCCGCTCTTCAAGCCGGATAAATTTCATCGCCGTTTTCGAATGGAA
AGGCATGTGTTTAATCGTATCCGAGAGGGAGTGGTTGCTCATGACCCATAATTCGAGTGCAAGACGGATGCCCTTGGCAA
GCTTGGATTCTCCTCTTATCAGAAATGCACCGCGGCCATCCGCATGCTTGCATATGGAATTCCAGGCAATCTAGTGGATG
AGTATGTGTGTATGAGTGAGACAACATGTCTGATGTCAATGTACAAGTTTTGCCAGGCTGTGATCGAGGTGTTTGGCCCT
GAGTACTTGAGGCAGCCAACTGCCGCTGATACAGAGATATTGTTGGCGACCGACGCAGCTAGAGGCTTTCCAGGCATGCT
TGGCAGCATAGATTGTATGCACTGGGAGTGGAAGAACTGTCATTTGCTTGGCAGGGCCAGTACAAAGGTCATGTCAAGGC
GTGCACTGTCATATTAGAAGCGGTGGCATCACAGGATCTTTGGATATGGCATTCTTTCTTCGGCATGGCAGGTTCTCACA
ATGATATCAACGTGTTGCAGCGTTCTTCAGTCTTCGCGAGGCTTGCAGAAGGCCACTCCCCACCTGTCAACTTTGAGATC
AACGGCCATCGTTACAACAAGGGATACTATCTAGCAGATGGTATATATCCTCAGTGGTCAACTTTTGTGAAGACAATCTC
GAAACCCCAAGGTGAGAAGAGAAAGAGATTAGCCCAAATGCAAGAGAGTGTTAGAAAGGATGTGGAACATGCTTTTGGTG
TGCTTCAATCCCGGTGGGGTATCGTTCGAAACCCTGCACTGTCATGGGATGAAAGGAAGCTTTGGGAGGTGATGACTGTT
TGTGTGATCATGCACAACATGATCGTCGAGGACGAGCGTGATGAGAGTATCTTCGACCAAGGATTTGACTATCAAGGTGA
AAATATTGAGCCCTTGCACCAAGACCCGGCCACATTTGAACAGTTTGCTTAATTCCATCGTGAGATGCGTGATTGACACT
CTCATTTGAATCTTCAAAATGACTTGGTTGAGCACGTGTGGGATCACATTGGCAACCAATAGATGTATTGGTCCATTTTA
TGTTTAGTCAAGACAATTTCAATTTGGTTGTAAAAATATTTTATTAAAGACAATTTCAATTGGGTTGTAAAACTATTTTA
ATTTTCAGACAAATATTTGGGTTGTAAACTAGTTTTGATGAAAATTTAGACATTTTTGACCCTAACGGACAGGATAGGGC
AAAAGGATGCGTCCGTGCGGTGGGCGCACGGCCACCGCATCTCAGAACACGCCCGAATACAACCCCAAATTGCTACCCAA
ACTGACAGAATCCGGATAAAACGGACGTTCGTTTGAGGTCGCGCGGTGGAGTTGGCATGAGGAAGAGACAAGGAGGCTCT
GTTGGAAGAATGTTGAGCCCCTCGTTTCAATCGAATAAAATAATCCCGGAGGTTGACACACGGGGGCCGAGAGTGACCGC
TCATCGTTCGGCACACCCGCGCAGCCTACATCCACACGTTGCGATTGCAAGCAAGAGTTTTGTAACGACAAGAAAAGCAT
CATCTCATCCAGCCCCCAG----------CCCCAGCCCAGGCCACCACCACACCACAGAAAAATGGACACAACCAC-CCC
GAAAGTTAAACCAGCCTCGCTCGCACCCCAACGGCCGAACGGTCCGCAGCGCAGCCACTCACTCACTCGCCAAGAAAGCA
GGAGCGCGACGCGGGCCGCAGCCATGAGCGCCGCGGAGCACAA---------GGAGATCGCCGTCGTCGCCGCCAAGAGG
CGGAGGGACGGCAAGGAGGAGGCGGCGGCGGCGGAGGAGGAGGTGGTGGAGCCGCTGTCGGCGCTGGCGGACGACGTGCT
GCTGCAGATCCTGGGACGCCTCGAGGGCGACCCGCGCGACTGGGCGCGCGCGTCCTGCGCGTCCCCGCGCCTCGCCGCGC
TCCTCCGGGCCGCCTGCTTCCCTCCGCGCCTCTCCCGGGCGCTCCCCGCCGAGCTGCTCCCCGCGGACGGGGCGCCCGCC
GCGTGGGCCGCGCTCCACAAGATGTCCGTCTGCTGCCCCGGCCTCCTCCGCGCCGGGATCCTCCTCGAGCCCTCCGACGA
CTTCGGCCTCGAGCTCGACATCGGCCCCGACCTCACAGTCCCCGCCTCCTCGTCATCCTCCTCCTCGTCCCTCGAGCCCA
CGGCCACCTCCTCGCTCCAGCCGCCCAGGA---CCGCAGAGCCTGAGCCCAAACCCAGCGATG---CACTGGCCGCCGCC
GACGCCGCCGCGTGGTCCCTCTACGATGACCTGTACCTGGACGCGGCCTACGACTGCTCCGAGACGCAGATCGCCGCCGC
GCCCGCGCCGGCGGCAACGGCAGAGGCAGAGGAGGAGGAGAAGCCACCGGCAGCCAATACCGCCCGGCGCGGCGTGGTGT
CGGGGACCCGCCGGCGGGCGCGGCGGTGGCTGGGGCCCGTGGGCGCGCACCTGGCGTCGGGGTCGTGGACGCTGAGCCGC
GAGCAGGGCAACAAGCTGCTGGCCAGCCGGTTCCGCGGCGACCGGCTGTACATCTGCGAGTGGCCCGGGTGCGTGCACGC
GGAGGAGCGGCGCAAGTACATGGTGTTCCGCGGCGTGTTCCAGGACTTCGCGCGCTCCCAGGTGCGGCGCGCGCTGCGGG
ACACGCGGCGCCCCACGGTCGCCGTGGACTGCGCCTTCTGCGGCTGCACGGAGGCGTGGGACCTCTACTCCGCCTTCTGC
CTCCGGAGCTTCTACGGGTACCACGACGACGGCGAGCCCGTGGTGCGCGCCTACGTCTGCGAGAACGGCCACGTCGCCGG
CGCCTGGACCGAGCGCCCGCTCTACGCCTGACCACCTGCTCCTGTCCGGTCCGGCGGCGACGACATGACAGGCAGGCATG
CCACGCTCCGCCATCGCTGGATCGATCGCCAAGCAGCATGCCTCGCAGGCTCTCGCGAGAA-TTCGGTGCGTGCATGGCC
GCGATGTGGATCTCGGCGAGCTCCGAGCGATGCATCCGTTCTCTTGTATCTTTTCATCCGATGTAGTAGTAACTCTGGCT
GATGCTTAGCATAAAAGAAGAATGAAAGCTCATGGATTTTTTACATAATTACATTGGCGCCATATATATATTACACCCTG
ACGAGTTCTGATTCACAATCTGCGTCCTATGCAGC-TATGTTCTGCAATTACCGGATACCGATTACGTTCTTTGCTCCAC
ACCACACTGCTAGGTGCC-TAGGTTAGGGCTGATCATCCTTGTTGGCATGCCGGGCTTTTGAATCCTCCCCTTTCCGATT
AT---CTTAAGCCACAACCTGCAGGTTAGGGCTAGCATCAAGAGGATCCATGCGTGTCAGAGATTGCCAATATGATAATC
AAAACTACTACCAGAAAAAGAAGTTGTCTGTGTGTACGATTGGTAGTTACTCCACCCCCATTTGGCAATTGGCACCGATC
CTGTGGGA-----TTGCGTGGGATTCCTCACCCTGGCTGCCAGCCG--------------------------CTGCTTCC
ATGCAACCAAGTTAATAGTATATTCATTCCAGTTCAAAAAGAAAGAGCTAATATTCATTCCCTTTGCCATCATCTGGTGC
CGCGATATCCACTCCGCG----TTGTTTATCCGTGGCGAGCTCTCCGACTCGGTCACCGTCCAAGCGGCAGGCAGATGCT
CGGTGACCTGTTGGTTCGTACGGATGGATGATGGTGGGGAGGAGATATGAGATGCCTTTCATCTTTCTGCGGCCCTTCGT
TATCCACAGATTTGCTGTGGAGGAGATTGCAGATATTTGATGCGTTGCTTCTCCGAGGTTCTTTTTTTTCATTTCTTTCG
AGTAA---------------------------------------------------------------------------
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>chr1D_327
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-------------------------------TTATTTGGAAGCTTTTGTGAAACGGACGTAGATCACCCGTAGGTTCAGA
ATTATCGTTTGAGGTACTATTATGCACCTATGTGATTGTAATAGCGTGTGCCATTATATTAA------------------
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--------------------------------------------------------TATGTATTAAAAATAGTGTGTTCC
ACGTAGCTTATGTGAAGCGCACGCTGGGTGCCCTTTGAGATAAATG-TTATCCGCGTGGCAAGATTTGTTTTGAGA--TG
TAATTGTATTCTCTCTCTT----------------TAACCATCCAACACCGCACATGGCCTTATTCAGCCTGGTCC-TTT
TTCTAGAAGGAGGTGATTT-TTTTTCTCGTACCTGAAACCCTTCGATACACGTCGGT--AGTGTGTGGGTGTGATGGAGT
TGTGTTGT------------------------------------------------------------------------
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--------------GCCTGCATG----GTGTTCCTGGGACTGGGAGGGGTGAGAGACA----------------------
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-------------------------------------------------------------------------AGGCTCT
GTTGGAAGAATGTTGAGCCCCTCGTTTCAATCGAATAAAATAATCCCGGAGGTTGACACACGGGGGCCGAGAGTGACCGC
TCATCGTTCGGCACACCCGCGCAGCCTACATCCACACGTTGCGATTGCAGGCAAGAGTTTTGTAACGACAAGAAAAGCAT
CATCTCATCCGTCTCCA--------CAGCCCCCAGCCCAGGCCACCACCACA-----GAAAAACGGACACAACCAC-CCC
GAAAGTTAAACCAGCCTCGCTCGCACCCGAACGGCCGAACGGTCCGCAGCGCAGCCACTCACTCACTCGCCAAGAAAGCA
GGAGCGCGACGCGGGCCGCAGCCATGAGCGGCGCGGAGCACAA---------GGAGATCGCCGTCGTCGCCGCCAAGAGG
CGGAGGGACGGCAAGGAGGAGGCTGCGGCGGCGGCGGAGGA---GGCGGAACCGCTGTCGGCGCTAGCGGACGACGTGCT
GCTGCAGATCCTGGGCCGCCTCGAGGGGGACCCGCGCGACTGGGCGCGCGCGTCCTGCGCGTCCCCGCGCCTCGCCGCGC
TCCTCCGGGCCGCCTGCTTCCCGCCGCGTCTCTCCCGGGCGCTCCCCGCCGAGCTGCTCCCCGCGGACGGGGCGCCCGCC
GCGTGGGCCGCGCTCCACAAGATGTCCGTCTGCTGCCCCGGCCTCCTCCGCGCCGGGGTCCTCCTCGAGCCCTCCGACGA
CTTCGGCCTCGAGCTCGACATCGGCCCCGACCTCACCGTCCCCGCCTCCTCATC---------CTCATCCCTCGAGCCCA
CGGCCACCTCCTCGCTCCAGCCGCCCAAGGCCGCCGCGCAGGCCGAGCCGAGACCCAGCGACGACACACTAGCCACCGCG
GACGCCGCCGCATGGTCCCTCTACGATGACCTGTACCTGGACGCGGCCTACGACTGCTCCGAGACGCAGATCGCCGCCGC
GCCCGCGCCAGCGGCAACGGCAGAGGAGAAGGAGGC------GCCGCCGGCAGCCAATGCCGTCCGGCGCGGCGTAGTGT
CGGGCACCCGCCGGCGGGCGCGGCGGTGGCTGGGGCCCGTGGGCGCGCACCTGGCGTCGGGGTCCTGGACGCTGAGCCGC
GAGCAGGGCAACAAGCTGCTGGCCAGCCGGTTCCGCGGCGACCGGCTGTACATCTGCGAGTGGCCCGGGTGCGTGCACGC
GGAGGAGCGGCGCAAGTACATGGTGTTCCGCGGCGTGTTCCAGGACTTCGCGCGCTCCCAGGTGCGGCGCGCGCTGCGGG
ACACGCGCCGCCCCACCGTCGCCGTGGACTGCGCCTTCTGCGGCTGCACGGAGGCGTGGGACCTCTACTCCGCCTTCTGC
CTCCGCAGCTTCTACGGGTACCACGACGACGGCGAGCCCGTGGTGCGCGCCTACGTCTGCGAGAACGGCCACGTCGCCGG
CGCCTGGACCGAGCGCCCGCTCTACGCCTGACCGCCTGCTCCAGTGCA-----GCGGCGGCGACATGACAGGCATACTAG
AGACGCTCTGCCATTGTTGAATCGATCGCCAAACAGCATATCTCGCAGGCTCTTACGATAAGTTCGGTGTGTGCATGGCC
GCGATGTGGATCTCGGCGAGCTCCGAGTGATGCATCTGTTCTCTTGTATCTTTTCATCTGAT---GTAGTAACTCTGGCT
GATGCTTAGCATAAAAGAAGAATGAAAGCTCATGGATTTTTTACATAATTACATTGGCGCCATATGTATATTATACCCTG
ACGAGTTCTGATTCACAATCCGCGTCCTATGCAACTTATGTTCTACAATTACCGAACGCCGATTACGCTCTTTGCTCCAC
ACCACACTGCTAGGTTAATTAGGGTAGGGTTGATCATCCTTGTTGGCATACTGGGCTTTTGAATCCTCCCCTTTCTGATT
ATTATCTTAAGCCTCAACTTGCAAGTTAGGGCGAGCATCAAGAGGATCCATGCGTGTCAGAGATTGTCAATATGATAATC
AAAAT---TACCGAAAAAAGAAGTTGTCTGTGTGCACGATTGGTAGTTACTCCACCCCCATTTGGCAATTGGCACTGATC
CTCTGGGATTGCGTTGCGTGGGATTCCTCACCAGAAGCAATAACAAAATAAGCTCCCCGTCCATGGCCGTCACTGCTTCC
ATGCAACTAAGTTAATA------------------------------------TTCATTCCCTTTGCCATCACGTGGTGC
CGCGACATCCACCCCCGTCCGATTGTTTATAAGTGGCGAGTTCTCCGACTCGGTCACCATCCAAGCGGCAGGCAGATGTT
CGGTGACCTGTTGGTTCGTACGGATGGATGATAGTGGGGAGGAGATATGAGATGCCTTTCATCTTTCTGCGGCCCTTCGT
TATCCACACAGATTTGCCGT-GGAGATTGCAGATATTTGATGCGTTGCTTCTCCGAGGTTTC-TTTTTCTTTTTCTTTCG
AGTAAATCCTTATTGCT---------------------------------------------------------------
----------------------------------------------------------TACTTAATCAGGCATACAATCA
CGATACAACCCGCGCTAGAAAAAACAGGGACGGGATTAAGCCACAAACATCTTTTCCTCATCCTAATCCTAATCCTAATA
ATAATAATAATAATAATAAAACTCTATTAAAGGGAATAGGTATTCTTGGTTTGGTTTAGTCCTTTTCGTTTGGTTTGAGT
GCACACTAAAGTTTTGTAATGTTGGCTCGTACACAGGCTAAGGGATTTGGGCCAGGTATTTGTATGTTGATGGGTCTTTT
ATGGGCTTTCATAGAGACCGCGAAAAATAGTTGGATCAAAATAAATTAACATTGTGGGAATTGATCACAGGACCTCCTAT
CTGGATCTTCGATGTAATAACCAACGATCTATGCACCATTCACATTTAATAATCCCAACTCTCTCTAAATATACAAGTGG
CAGTCCTCCTGTTTAGGGCGAGCTAATTAAGCGAATGAGAAAAATTAAAGGAAGGATTGTGGGCGGAAATAAAAGGGTCT
GTTTAGGACACATCTAGATGTGACATAACTATGTCACATCTAAGCTGATGTCTATTTTGTTTGTGGTCTATTTTTTCTTT
CTAGTTTTTTTTTTGCTTCTTGTTGTTGCATTATATATTTGTGGGAGCTTAGATGTGACATCCTTAAAAAACATTTAGAT
GTGAATTAGACAAACTGTAAATAAAATATTTAAACAGATGTGGCTAATTAAAGAAAGAATTAACGGTAAACCGGTGGAAT
AAATAAAAGAAAGAATGTTGTCTTGATAAATAGAACATTCAAATAGATGAGGCTAATTAAAGAAAGTACTTGAGGTAAAA
TGTAGGATAATTAAAAGAAAAGATCTGTAGGCTTCAATGTGTTGCGGCTATTAAATTAGAAAAGGAAGAATTTGATTCCC
GACTAAAACGGGTGAGGACGTCAGGGTAATTAAAGGAAGGATTATACTTAAAATGAAATCAATGGAAGATTATGCCAGAC
AAAGAAAATATAACACGGCTAAATTGCATCATTTTTTTATGTTCATTTTGTAGAAGGATTTGATTCCAGACTAAAACGGG
TGAGGACGTCATGGTATTTTTTTATCTTCATTTTCTCCATAGTGAATCCGGCGCCGTGGGACATTGCTTGCATAAAACAT
CAATTTTTCCCGTTGCAACGCACGGGCATATGTGCTAGTCTTTTCCTAAACTCTATTGCCTGCTTCGCACATAAATGAGC
CGCTATATTAGCGTCTTGTCGTATGAATTACTCCTTCCGTAAGAGAATATAAGAGCATTTAAATTATTAAAGTAGTGATC
TAAACGCTCTTATATTTCTTTACGGAAGGAGTACACCTAAAGCTCTGAAAACGCCCACTCGGTTCTTTGATCTCCTGAAG
AACGCCAGCAATCTCAGCACGACCAAAACCGTCCGTCTTCCACCAAGGCGAGATACGCCATCCAAGTTGAGAAGCAGCTT
GTCCCCAACCCGGTGCTCTCGGAATTTTTTGCTTCAGGGATTCTACGTCCTCCCAAGTTGCCCCGGCGACATGCTCAGCA
ATGGTCCTTACACTACTGAACGATTCCC-GCTTTAGACCACTCGGCTACAGA
>SNPs
----------SS--------------------------------------------------------------------
---------------------------------------------S--------------SS---------S--------
---------------------S------S-----S--------S------------------------S-----------
--------------------SSS-S--SSS---SS---------------------------------------------
S-SS-------SS--S-SS------------S---S--S---S-----------S------S--------SSS------S
----SSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------S---S---------S
-----S----------SS--------------------------------S--------SS-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S----S---S
-----S----------------------------------------S-----------S---S----S-SSSSS-SSS--
-------S-------S---SSSSSSSSSSSSSSSS------S--S--S-S--------------S-S-S-----------
--S---S---------S----S-----SS--------------------S--S---------------------------
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-----------------------SSSS-----------------------------------------------------
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--------------------------------------------------------------------------S-----
---------------------------------------------SS---------------------------------
---------------------------S-------------S--------------------------------------
-----------------SSSSSSSS-------------------------------------------S----SSSS---
--------------------SS----------------------S---------------S-------------------
----------------------------------------SS-SSSSSSSSS-----------------S----------
--------------------------S-----------------------------S-----------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
---------------------------------------------------------------S---S---------S--
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
-S--S-----S---------------------------------S-----------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
-------------------S-----------------------S------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
----------S-------S---------------------S---------------------------------------
--------------------------------------------------------------------------S-----
---------------------------SSSS-----------SS-S--SS-------------------S----------
--------S---------------------------------------------------S---------SSSS--SSSS
-SS-----------------------------------------------------------------------------
---------------------------------S-------------------------------S-S------------
------------S----SSSS-SSSSSS-SS-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
------------------------------------------------------------------------------S-
-----S------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-------------
----------S---S-------SSS-SSS-SSSSS-SSSSSS-SSSSS-SSS-SS-SSSSSSS-SSS-SSSS-S-S-SSS
-SS-S-SSSSSSS-S-SS-SSSSSS-------------------------------------------------------
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-----------------------------------------------------------S--S-----S-----------
---S----S-SSSS-SS---------------------------------------------------------------
---------------------------------------------------S-------S-S------------------
----S-------------------------------S-S------------------------------------S----
---S----------------------------------------SS----------------S-S--S---------S--
-------------S--S-SS--------S-----------------------
>forward_1109
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-------------------------------------------------TGCACATGGCCTTATGAGGG-----------
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>reverse_5209
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--------AGATTCACAATCCGCGTCCT----------------------------------------------------
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----------------------------------------------------
