>input_sequence_51800
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---------------------------------------------------------------------ATGCCGACGGA
TGCAGGCAAGAAGGCGTATGTTGTTGCCCTGGTGATCCAGGTGATCTACACCGGCATGTACGTCGTCTCCAAGGCGGCCT
TCGATGGCGGCATGAACACCTTCGTCTTCATCTTCTACCGCCAGGCAGCCGCCACTCTCCTCTTGCTACCCCTCGCCATC
CTCCTCGAGAGGTACTCAACTAATTAACCATTTATCTACC---TTACTTGATCAAGTCATGATTAAAATGCAAACAATCA
GTGGCTATGCATGCATGGATGCAATCTAGCACCTGTTAAAATTAGTTGATCCATCTTAAGTTCTTAA-CTAATATGAGTG
AGAT--------CCATGACTGTTAATGATTTTGCAGGAGAAACGCGCCACCCATGTCACTGTGGTTGTTTACCAAGATCT
TCATGTACGCGCTACTCGGGTAAGAAC-------ACGACGCCATTGATCT--CCCTTTGAATTCATC-------------
--------------------ATCATC----TATA----TA------TGCGCGTAAAAGTAACATGTAGGTATTGCACGTA
CGTTACGTACGCAGGAACACGGTGAGCATGAACCTGCACAACATCAGCCTCAAGTACACGTCGGCGACCGTGGCATCAGC
CACGAGCAACTCCATCCCCGTCATCACCTTCCTCTTCGCCGTCCTGCTCCATCTCGAAGCCATCAAGCTCCGCGCCGCCT
CGGGCACGGCGAAGCTCGCCGGCGTCGCGCTCTGCGTGGCCGGCATCCTCGTCATCGCCCTCTACGCCGGT---------
------------------CCGCCGCTCAGCCCCCTCAACCACCACCGCGCCTTCCACGCGCACGCCGCCGCAACGGCCGC
CGGGAAGCAGGGGGAGTGGATGAAAGGCACGTTCCTGATGCTCCTGGCCAACGTGACGTGGTCGCTCTGGATCGTCCTGC
AGGCGCGCCTCCTCAAGGAGTACTCCAACAAGCTGCTGGCCACGGCGCTGCAGTGCCTGCTCAGCACGGTGCAGTCGCTC
GCGCTGGCGGCGGCCGTGACCGGCGGTGGCGGGGAGGACATGTCGGCCGCCTGGACGCTGCGGTTGGACGTGGGTCTCGT
CGCCGTCGCCTACTCCGGGTTCGTGGTCACGGGGGTGTCCTTCTACCTCCAGGCGTGGTGCATCGAGAGGCGGGGCCCCG
TGTTCTTGGCCATGTCTAATCCGGTGGGGCTCGTGCTCACCGTGTTCTGCTCCTCCTTCTTCCTCGGCGAGGTCGTCCAC
CTCGGCAGCGTCCTCGGCGGGGCGCTGCTCGTCGCCGGCCTGTACAGCGTGCTCTGGGGGAAGAGCAAGGAGCAGCCACC
GCCGCCGCCGCTTAGTGCAGCTCCTGCATCAGAAA---CCATCATGAAACAAGGATGCGATGGTAGCAATGCTCGCACCG
GCGCCATGAACAAGGAAGAGGACGACGAGGTGAAACTGGAGGAGGAGAAGAGAGCCAAGCTGGATTCACAGGTGTAG---
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>chr1B_1_TraesCS1B01G128000
CGAGCCGGCGGTGGTCGCTTCGGATAACACCGTCAACGCATGGCTGTCGACTGGATTCTTTACTGCTCTGCCAATGGCTT
CTCCCTCGGGCGGACCGTGGCCACAATGACTTCCTGACCGCGGATAACAGAGTGAGGCCAGCTCCGGTGGTGGAGCGACA
ATAGTGGCTCATTTTGAAATAGAAGACTATTGGCTCCGCAAGGACCTAGATGTGATTCTTATTTTATTTAGCTTTGCTTT
GTAATGCTTGACTTTGGTTAGTGGATCTGGTGGCTTCTTCACAAAATAATCGTCTGCAG---------------------
--------------------------------------------------------------------------------
--------------------------------AAAAAGAATGAATGTATTTAATACCTTTTTCTGAAAA-TATTTTTTGG
TTCAAGACACAAAAATGAGTTATTTCAATGCATGTGTGCCTCAAGAAACAACAACACGTATAGTTGCAACAGGAGACACT
GTTCACTTGGTTGAGATCCCAATGGACATTGCATAATGGATGGTGTTGGAGGACATCCCCTAATGGGGAGAAAATCTTGT
-CTACAAGACACACACTAGCCGGTATATTCTCACACTTCTCATCAACAACGAGTGATCATCTATCGTTTGGCAGAAGCAA
GACGAGTACAGCA----CTACCTAGTTGGCTAGTTTCCAAAATGAGCTACAAGCACTGATC-----AAAGTGCTATGCAA
CCGCATCAAACCTTTCCCAAAGGAAA--AAAAATAATATAAATATATATATATAGCTAGTACTACTCCTACTCGTTGCCC
AAAGAAATAAAATGTGTGAATGAGAGCAAGCCAG----AGAGAA-AAAAAATCGCCAGAAGGAAATAGAGAAAAAGGCTA
ACATTATCGCCAAAAGAAAAA-GAGAAAAAAGCTATTAGCTAATTACTTACTTCCCT-----------------------
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--TTGAAACATCAACATACTTGCATTCTCCATCGATCTTT----ATATAAGGCACTCTCCTGTGTCGCTCAAGTCTCAAC
TCAAACCACTGAA-AACTTCTCAATCGATCAGGAGTCGAGC-------ACTCAGGAGAAGGAGGTAGCCATGCCGACGGA
TGCAGGCAAGAAGGCGTATGTTGTTGCCCTGGTGATCCAGGTGATCTACACCGGCATGTACGTCGTCTCCAAGGCGGCCT
TCGATGGCGGCATGAACACCTTCGTCTTCATCTTCTACCGCCAGGCAGCCGCCACTCTCCTCTTGCTACCCCTCGCCATC
CTCCTCGAGAGGTACTCAACTAATTAACCATTTATCTACC---TTACTTGATCAAGTCATGATTAAAATGCAAACAATCA
GTGGCTATGCATGCATGGATGCAATCTAGCACCTGTTAAAATTAGTTGATCCATCTTAAGTTCTTAA-CTAATATGAGTG
AGAT--------CCATGACTGTTAATGATTTTGCAGGAGAAACGCGCCACCCATGTCACTGTGGTTGTTTACCAAGATCT
TCATGTACGCGCTACTCGGGTAAGAAC-------ACGACGCCATTGATCT--CCCTTTGAATTCATC-------------
--------------------ATCATC----TATA----TA------TGCGCGTAAAAGTAACATGTAGGTATTGCACGTA
CGTTACGTACGCAGGAACACGGTGAGCATGAACCTGCACAACATCAGCCTCAAGTACACGTCGGCGACCGTGGCATCAGC
CACGAGCAACTCCATCCCCGTCATCACCTTCCTCTTCGCCGTCCTGCTCCATCTCGAAGCCATCAAGCTCCGCGCCGCCT
CGGGCACGGCGAAGCTCGCCGGCGTCGCGCTCTGCGTGGCCGGCATCCTCGTCATCGCCCTCTACGCCGGT---------
------------------CCGCCGCTCAGCCCCCTCAACCACCACCGCGCCTTCCACGCGCACGCCGCCGCAACGGCCGC
CGGGAAGCAGGGGGAGTGGATGAAAGGCACGTTCCTGATGCTCCTGGCCAACGTGACGTGGTCGCTCTGGATCGTCCTGC
AGGCGCGCCTCCTCAAGGAGTACTCCAACAAGCTGCTGGCCACGGCGCTGCAGTGCCTGCTCAGCACGGTGCAGTCGCTC
GCGCTGGCGGCGGCCGTGACCGGCGGTGGCGGGGAGGACATGTCGGCCGCCTGGACGCTGCGGTTGGACGTGGGTCTCGT
CGCCGTCGCCTACTCCGGGTTCGTGGTCACGGGGGTGTCCTTCTACCTCCAGGCGTGGTGCATCGAGAGGCGGGGCCCCG
TGTTCTTGGCCATGTCTAATCCGGTGGGGCTCGTGCTCACCGTGTTCTGCTCCTCCTTCTTCCTCGGCGAGGTCGTCCAC
CTCGGCAGCGTCCTCGGCGGGGCGCTGCTCGTCGCCGGCCTGTACAGCGTGCTCTGGGGGAAGAGCAAGGAGCAGCCACC
GCCGCCGCCGCTTAGTGCAGCTCCTGCATCAGAAA---CCATCATGAAACAAGGATGCGATGGTAGCAATGCTCGCACCG
GCGCCATGAACAAGGAAGAGGACGACGAGGTGAAACTGGAGGAGGAGAAGAGAGCCAAGCTGGATTCACAGGTGTAGCTG
GGAAATAC-TACTACAGAGTTACAGCAGCCATGCATCCTGCAGGCAGGCAGGTCGGCCACGAGGAGCTGTTTCTTTTGAC
AGAGACTCTTGAGTGAAATGCATAATACAGCACTAGGAAATGCACGAGTAGTACGCTAGTACTAGAAACTTTATGAACCA
TCGTCGTCCAAGGGCTGAAACGCAAGTGGCAGAGT---ATTGCTGGTATGTAACGGGAGCGGCTATTTCTAAGATGGGAT
GGG-AATTCATATTTCTAAGTGGATGATTCAGCTTTGTTTTTATGTTGCCCACATTGTGCAACTTGACCGACTTAGAAAT
AAATTACGACTCCATTACAAACCTGATGTCAGTTTTTTTTTAGCCATGACAAATCGAACGGTTTTTATGGCAATTTATGT
TTATCGA-GATGGCAAGTTTAGTTGGCAAGTATGAAAATTCCGTCTCAGTTCATTTTATGGCCAGAAAATTGTCGTGCTC
GTAAACCAAATTGGGCATCCTCACGCCAACTAAATTTACCATAAAAAACTTTTGATTTGTATGTTAAAAGTCTAATAGCA
GATTTTTAGCATTACCGGTTGGTGATTTAGAAATA-GTAACCCTGATATTCAAATGTTAAAATTCCG--------TAGAC
ATAATTTACGGTAAGAATTAATACGTGCTCCGTATGATTAGTTTGATCTGCCCGA-------------TACATGTTCAGC
ACATGTTGGTCTCTTCT--CATGATTGTTACAAGTTTAAAAGAGGACTTCCAAAGTAAAAAA-GGTTTTATTTTAATTCC
TCAAAGTATTACTCCCGCTAACTGATTACTCACTATCATATAAGTATATCACTTTGAACTAAATGGAACCTTTAATAGCC
CCACTCATGCTTATCTTATCCCCTAACCATTTCTTTTTGACTCATTTGAC-CCACCGCTGAAAAGTTATGGTCTAGTTAA
-CCCATGATTTGTGGTGGCCTGGCCGGACTTGTATGATTTTTTATTCAGAAAGAATTCCATATCTTTCGA
>chr1D_1
CGAGCCAGCAGTGGTCACTTCGGACAGCACCGTCAACACATATCTGGTGACTGGATTCTTTACTGCTGTGCCGAAGGCTT
CTCCTCCGGGCGGACCATGGCCACAATGACTTCCGGACTGCGGAAAACAAAGTGAGGCCCGCTCCGGCGGTGGACCGACA
ATAGTGGCTCATTTGGAAGTAGAAGACGATTGGTTCCCCAAGGACCTAGATGCAATTCTTATTTTATTTAGCTTTGCTTT
GTAATG-TTGACTTTGGTTAGTGGATCTAGTGGCTTCTTCCCAAAATAAAGTATGTAGAAAAAGAAAGAACATACGTATA
ATAATAC-------------------------------------------------------------------------
-------------------------------------------------------CCTTTTCCTGAAAAATAGTTTTTGG
TTCAACACACAAAAATGAGTTATTTCAATG----TGTGCTTGAAGATCCC--AACG----TAGTTGCAACAGGAGGCACT
GTTCACATGGTTGAGATCCCAATGGACATTGCATGATGGATGGTGTTGGAGGACATCCCCTAATGGGGAGAAAATCTAGC
-CTACAAGACACACACTAGCCGGTATATTCTCACACTTCCCATCAAGATCGAGTGATCACAGATATTTTAGCAGAAGCAA
GATGAGAA-AGCA----CTGGCTAGTTGGCTAGTTTCTAAAATGAGCAATAAGCACTGAAC-----AAAGTGCTATACAA
CCGCATCAAGTCTTTCCCAAAGGAAA--AAATATATGAG------------ATACATAGTATTACTCCTACTCATTGCCC
AAAGAAATAAAATGTGTGAATGAGAGCAAGCCAG----AGAGAC--AACATTCGCCAGAAGGAACTAGAG-AAAAGGCTA
ACATTATCGCCAAAAGAAAAA-GAGAAAAAAGCTATTAGCTAATTACTTACTTTCCT-----------------------
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--TTGAGACATCAACATACTTGCATTCTCCATCGATCTTT----ATATAAGGCACTCTCCTGTGTCGCTCAAGTCTCAAC
TCAACCACTG--A-AACTTCTCAATCGATCAGGAGTCGAGC-------ACTCAGGAGAAGGAGGTAGCCATGGCGACGGA
TGCAGGGAAGAAGGCGTATGTTGTTGCCATGGTGATCCAGGTGATCTACACCGGCATGTACGTCGTCTCCAAGGCGGCCT
TCGATGGCGGCATGAACACCTTCGTCTTCATCTTCTACCGCCAGGCAGCCGCCACTCTCCTCTTGCTACCCCTCGCCATC
CTCCTCGAGAGGTACTCAACTAATTAACCATTAACCTACCTAGTTACTTGATCAAGTCATGATTAAGATGCAAACAATCG
GTGGCTATGCATGCATGGA-------------------AAATTAGTTGATCCATCTTAAGTTCGTAAATTCATATGAGCG
AGAT--------CCATGACTGTTAA-GAGTTTGCAGGAGAAACGCGCCACCCATGTCACTGTGGTTGTTCACCAAGATCT
TCATGTACGCTCTACTCGGGTAAGAACTAAGAACACGACACCATTGATCT--CCCTTTGAATTCATC-------------
--------------------ATC------ATATA----TA------TACGTGTAAAAATAACAT----GTGTTGCACGTA
CG-TACGTACGTAGGAACACGGTGAGCATGAACCTGCACAACATCAGCCTCAAGTACACCTCGGCGACGGTGGCATCAGC
CACCAGCAACTCCATCCCGGTGATCACCTTCCTCTTCGCCGTCCTCCTCCACCTCGAAGCCATCAAGCTCCGCGCCGCCT
CAGGCACGGCAAAGCTCGCCGGCGTCGCGCTCTGCGTCGCCGGCATCCTCGTCATCGCCCTGTACGCCGGG---------
------------------CCGCCACTCAGCCCCCTCAACCACCACCGCGCCTTCCACGCGCACGCCGCCGCCGCGGCCGC
CGGGAAGCAGGGGGAGTGGATGAAAGGCACGTTCCTGATGCTCCTGGCCAACGTGACGTGGTCGCTCTGGATCGTCCTCC
AGGCGCGCCTCCTCAAGGAGTACCCCAACAAGCTGCTGGCCACGGCGCTGCAGTGCCTGCTCAGCACGGTGCAGTCGCTC
GCGCTCGCGGCGGCCGTGACCGCCGGTGGCGGGGAGGACATGTCGGCCGCGTGGACGCTGCGGCTGGACGTGGGGCTCGT
CGCCGTCGCCTACTCCGGGTTCGTGGTCACGGGGGTGTCCTTCTACCTGCAGGCGTGGTGCATCGAGAGGCGGGGCCCCG
TGTTCCTGGCCATGTCTAATCCGGTGGGGCTCGTGCTCACCGTGTTCTGCTCCTCCTTCTTCCTCGGCGAGGTCGTCCAC
CTCGGCAGCGTCCTCGGCGGGGCGCTGCTGGTCGCCGGGCTGTACAGCGTGCTCTGGGGGAAGAGCAAGGAACAGCCATC
GCCGCCGCTGCTTAGTGCAGCTCCTGCATCAGCAA---CCACCATGAAACAAGGATGCGATGGTAGCAATGCTCGCACCG
GCGCCATGAACAAGGAAGAGGACGACGAGGTGAAACTGGAGGAGGAGAAGAGAGCCAAGCTGGATTCACAGGTGTAGCTG
GGAAATACGTACTACAGAGTTACAGCAGCCATGCATCCTGCAGGCAGGCAGGTCGGCCACGAGGAGCTGTTTCTTTTGAC
AGAGACTCTTGAATGAAATGCATAGTACAGCACTAGGAAATGCACGAGT--------AGTACTAGAAACTTTATGAACCA
TCGTCGTCCAAGGGCTGAAACGCAAGTGGGAGAGG---ATTGCTGGTATGTAACGGGAGCGGCTATTTCTAAGATGGGAT
GAG-AATTCATATTTCTAAGTGGATGATTCAGCTTTGTTTGTATGTTGCCCACA-------ACTTGATCGACTTAGAAAT
AAATTACGACTCCATTAGAAATCTGACATCAGGTTTTCTA---CCATGACAAATCGAACG-TTTTTATGGCAATTTGTGT
TTATCATTGATGGCAAGTCTAGTTGGCGAGCATGAAAATTCAGTCTCAATTCATTTTTTGGCCACAAAATTGTCGTGCTC
GTAAACTAAACTTGGCATCCTCATGCCAACTACATTTGCCATAAAAAACTTTTGATTTGTATGTTTTAGCATTACTGATA
A---------ATTAACTTTTGGCGATTTAGAAATA-GTAACTCTGGTATGGCAATGTTAAAATTCCG--------TAGAC
ATAACTTACGGTAAGAATTAGTACGTACT------------TTTGATCTGTCTTGGCCGGTTGGCCCCTACATGTTCAGA
ACATATTGGTCTCTTCT--CATG-TTGTCACAAGTTTAAAAGAGGACTTCCAAAGTAAAAAAAGGTTTTGTTTTAATTCC
TCAAAGTATTACTCCCGCTAACTGATTACTCACTATCATATAA-----TCACTTTTAACAAAATGGAGCCTTTAATA-CC
CCACTCATGCTTATCTTATCCCCTAACCATTTCTTTTTGACTCATTTGAC-CCACCGTTGAAAAGTTATGGTCTAGTTAA
-CCCAGGATTTGTGGTGGCCTGGCCGGAGTTGTATGATTTTTTATTCAG-AAAAAATTCATATCTTTCGA
>chr1A_2
-GAGCCGGCGGCGGTCGCTTCGGGCAGCACCGTCAACGCATGGTTGGCGACTGGATCCTTTATTGCTCTGCAGACGGCTT
CTCCTCCGGGTGGACCGAGGCCACAACGACTTCCTGACCACGAACAACAAAGTCAGGCCAACTCCGGCGGTGGAGCGACA
CCAGTGGCTCATTTGAAAGTAGAAGACGATTGGTACCCCAAGGACCTTGATGCAATTCTTATTTTATTTAGCTTTGCTTT
GTAATGCTTGACTTTGGCTAGTGGATCTGGTGGCTTCTTCGCAAAATAAAGTACGTAGAAAAAGAAAGAATGTAACCCAA
AAATATTTTTCAGAAAAAAGTATTAAATGCATTCATTCTTTATTCCCCCCCCCCCAAAAATAAAAAGAATGAATGTATTA
AAAAAATAAAAAGAATGAATGTATTAAAAAATAAAAAGAATGAATGTATTTAATACCTTTTTCTGAAAAATATTTTTTGG
TTCAACACACAAAAAAGAGTTATTTCAATGCATGTGTGCCTGAAGAAACAACAACACGTATAGTTGCAACAGGAGACACT
GTTCACTTGGTTGAGATCCCAATGGACATTGTATGATGGATGGTGTTGGAGGACATCCCCTAATGGGGAGAAAATCTTGT
-ATACAGGACACACACTAGCCGGTATATTCTCACAGTTCTCATCAACAACGAGTGATCATCTATCTTTTGGCAGAAGCAA
GATGAGTGAAGCACTACCTAGCTAGTTGGCTAGTTTCCAAAATGAGCTATAAGCACTGATC-----AAAGTGCTATGAAA
CCGCATCAAAACTTTCCCAAAGGGAA--AAAA---------------ATATATTGCTAGTATTGCTCCTACTCGTTGCCC
AAAGAAATAAAATGTGTGAACGAGAGCAAGCCAG----AGAGGGGAAAAAATCGCCAGAAGGAAATAGAG-AAAAGGCTA
ACATTATCGCCAAAAGAAAAAAGAGAAAAAAGCTATTAGTTAATCACTTACTTTCCT-----------------------
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--TTGAGACATAAACATACTTGCATTCTCCATCGATCTTT----ATATAAGGCACTCTCCTGTGACGCTCAAGTCTCAAC
TCAACCACTG--AGAACTTCTCAATCGATCAGGAGTCGACCACTCAGGAGTCAGGACAAGGAGGTAGCCATGGCGACGGA
TGCAGGGAAGAAGGCGTATGTTGTTGCCATGGTGATCCAGGTGATCTACACCGGCATGTACGTCGTCTCCAAGGCGGCCT
TCGATGGCGGCATGAACACCTTCGTCTTCATCTTCTACCGCCAGGCAGCCGCCACTCTCCTCTTGCTACCCCTCGCCATC
CTCCTCGAGAGGTAATCAACTGACCATTTACT----TACCTACTG-CTTGATCAAGTCATGATTAGGAAGCTAAAGATCA
GTGGCTATATATGCATAGATGCAATCCAACACCTATTAAAATTAGTTGATCCA--------TCTTAA-CTAATATGAGTG
AGGT--------CCATGACTGTTAATGATCTTGCAGGAGGAACGCGCCACCCATGTCACTGTGGTTGTTCACCAAGATCT
TCATGTACGCTCTACTCGGGTAAGAAC-------ACGGCACCATTGACCT--CCCTTTGAATTCATC-------------
--------------------ATCTTCATCATCTA----TA------TACGTGTGAAAGTAACAT----GTATTGCACGTA
CGTTACGTACGTAGGAACACGGTGAGCATGAACCTGCACAACATCAGCCTCAAGTACACCTCGGCGACGGTGGCATCAGC
CACGAGCAACTCCATCCCCGTCATCACCTTCCTCTTCGCCGTCCTCCTCCACCTCGAAGCCATCAAGCTCCGCGCCGCTT
CGGGCACGGCGAAGCTCGCCGGCGTCGCGCTCTGCGTGGCCGGCATCCTCGTCATCGCCCTCTACGCCGGG---------
------------------CCGCCGCTCAGCCCCCTCAACCACCACCGCGCCTTCCACGCGCACGCCGCCGCCACGGCCGC
CGGGAAGCAGGGGGAGTGGATGAAAGGCACGTTCCTGATGCTCCTGGCCAACGTGACGTGGTCCCTCTGGATCGTCCTCC
AGGCGCGCCTCCTCAAGGAGTACCCCAACAAGCTGCTGGCCACGGCGCTGCAGTGCCTGCTAAGCACGGTGCAGTCGCTC
GCGCTGGCCGCGGCCGTGACCGCTGGCGGCGGGGAGGACATGTCGGCTGCGTGGACGCTGCGGCTGGACGTGGGTCTCGT
CGCAGTCGCCTACTCCGGGTTCGTGGTCACGGGGGTGTCCTTCTACCTGCAGGCGTGGTGCATCGAGAGGCGGGGCCCCG
TGTTCCTGGCCATGTCTAATCCGGTGGGGCTCGTGCTCACCGTGTTCTGCTCCTCCTTCTTCCTCGGCGAGGTCGTCCAC
CTCGGCAGCGTCCTCGGTGGGGCGCTCCTGGTCGCCGGGCTGTACAGCGTGCTCTGGGGGAAGAGCAAGGAGCAGCCGGC
GCCGCCCCCGCTTAGTGCAGCTCCTGCATCAGCAA---CCACCATGAAACAAGGATGCGATGGTAGCAATGCTCGCACCG
GCGCCATGAACAAGGAAGATGACGACGAGGTGAAACCGGAGGAGGAGAGGAGAACCAAGCTGGATTCACAGGTGTAGCTG
GGAAATACGTACTACAGAGTTACAGCAGCCATGCATCCTGCAGGCAGGCAGGTCGGCCACGAGGAGCTGTTTCGTCTGAC
AGAGACTCTTGAATGTAATGCATAATACAGCACTAGGAAATGCACGAGT--------AGTACTAGAAACTTTATGAACCA
TCGTCATCCAAGGGCTGAAACGCAAGTGGCAGAGGATAATTGCTGGTATGTAACGGGAGCGGCTATTTCTAAGATGACAT
GGGAAATTCATATTTCTAACTGGATGATTCAGCTTTGTTTTTATGCTGCCCACATTGTGCAATTTGATCGACTTATTACA
AATA----------------------------------------------------------------------------
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----------AATAACTTTTGGCGATTTAGAAATTTGCAACTCTGATATGAAAATGTTCAGAACTTTTGGCGATTTAGAC
ACAACTTACGGTAAGAATTAATA---------TATGATTAATTTGATCTGTCTTGGCCGGTTGGCACCTACATGTTCAGT
ACATGTTGGTCTCTCTTCACATGATTGTCACAAGTTTAAAAGAGGACTTCCAAAGTAAAAAA-GGTTTTATTTTAATTCC
TCAAAGTATTACTCCCGCTACCTGATTACTCACGATCATATA------TCACTTTCAACAAAATGGAGCCTTTCATACCC
CCACTCATGCTTATCTTATCCCCTAACCATTT-TTTTTGACTCATTTGATTCCACCACTGAAAAGTTATGGTCTAGTTAA
ACCCAGGATTTGTGGTGGCCTGGCCGGATTTGTATGATTTTTATTCA-----------------------
>chr6D_358
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-----------AAAATGAGTAATTTTAATAATTA--TGCCTGAAGAAACAAGAACG----TAGTTGCAACAGAAGACACT
ACGGAAATTTTGGAGATCCGAATGCACATTGCAGGGTGGATGGTGTTGGAGGACATCCCCTAATTGAAATAAAAATCATT
GCTACAAGACATACACTAGCTGGTACATTCTCACACCTCCAATCAATAACGATTGATCACATATATTTTGGAGGAAGCAA
GAGGGGTACAACA----CTAGCTAGCTAGCTAGTTTCCCAAGTGAGCAGTGAGCACTGACCAAACTAAAGTGCTATGCAA
CCGCATCAGATCTTTTCCAAAGGGAAAGAAAGATGAGAG------------ATACATCACTCT-----------TTGCCC
AAAGACATAAAATGTGTGAATCAGAGCAAGCCAGAGAAAAAGCA-ACATTGTCACAAAAAGAAAAGAGAG-AAAAGGCTA
ACTTTGTCACAAAAAGATAAG-GAGAAAAAGCTGCTAGCTAGTACTCCATCCATTCCGAATTGTAGTGCGTGTATTTTTT
TTGGCTGGGATTCCAAATTGTAGTACGCATTTGCAGCCACATGCATATTTGGACGAAGCTGGCCCTGGTTAGAATCTCCT
CTCCATAGTGCGTAGGACAGGCTGCTGCATGCAGCGAGGCTGCTTTCGTCCATACTGCAACATCCAGGTCATGCATTGGT
ATTGGAGCTAGAATGTATGCGCACTATAGAGGTAGTACTTAATTTAATCATGAGCATCTATAGAGGAATAGGGAGTACTT
AGTTTAAACATGAGCATATATGCATTCCCGGTTGAGGTTTGATTATATAAGGCGTACTCGGTGAAAAGTGAGTACTT---
----------------------------------GTCGATC-------AGTCGGGAGAAGAAGCTAGGCATGTCGACGGA
TGCAGGGAAGAAGGTGTACGTTGTTGCAATGGTGATACGGGTGATCTACACCGGCATGTACATCGTCTCCAAGGCGGCCT
TCGACGGCGGCATGAATACCTATGTCTTCATCTTCTACCGCCAGGCAGCCGCCAGTCTTCTCTTGCTACCCCTCGCTATC
CTCCTTGAAAGGTAATTAACTAACTAATTAGT----TACTTAGTTACTTGATCAAGACATAACTAGC-------------
----------------------------------------------TGATT------------CCTC-TTAATATGAGTC
GTATAATCGTATCCACGAATGTCGATGATTTTGCAGGAGAAACGCGCCACCCATGTCACTGTGGCTGTTCACCAAGATAT
TCATGTATGCTTTACTCGGGTAAGAG-TAGGAGCACGACACCATTGACATTGCACTTTGGATTCGTCGTTTGT-TTTTGC
TTAAATGGATCGAGGAAGTGATA----ATATATAGTAGTACATGCGTACGTGTAACAGTAACAA----GTATTGCAC---
----ACGTGCGCAGGAACACGGTGAGCATGAACCTGCACAACATGAGCCTCAAGTACACCTCCGCGACGGTGGCTTCAGC
AACGAGCAACTCCATCCCCGTCTTCACCTTCCTCTTCGCCGTCCTCCTACATTTCGAGGCCATCAAGCTCCGCACCGCCG
CGGGCACAGCAAAGCTCGCCGGCGTCGCGCTCTGTGTCGCCGGGGTCCTCGTCATCGCCCTCTACGCCGGCCCGCCATGG
CCGGCGGGAAGCTCCGCACCGCCGCTCAACCCCCTCAACCACCACCGCGCCTTC---------GCCGCCGCCATGGCCGG
CGGGAAGCAAGGGGAATGGATGAAAGGCACGTTCCTGATGCTCCTGGCTAACCTGACGTGGTCGCTCTGGATCGTCCTCC
AAGCGCGCCTCCTCACGGAGTACCCCAATAAGTTGCTGGCCACGACACTGCAATGCCTGCTCAGCACGGCGCAGTCCCTC
GCCCTGGCGGCTGCGGTGACCGCTTT---CGGGAAGGACATGTCCGTCGTGTGGAGGCTACAGCTGGATGTGGGGCTCGT
CGCCGTGGCCTACTCCGGGTTCGTGGTGACGGGGGTGTCCTTCTACCTGCAGGCGTGGTGCATCGAGCGGCGAGGCCCCG
TGTTTCTGGCCATGACTAATCCGGTAGGGCTCGTGCTCACCATGTTTTGCTCCTCCTTCTTCCTCGGTGAGGTCGTTCAC
CTCGGCAGCGTCCTTGGCGGGGCGCTGCTGGTCGCCGGGCTGTACAGCGTGCTTTTGGGGAAGAGCAAGGAGCAGCAACA
GCCACCGCCACCTAGTCTAGCTCCTGCATCAGCAGCGTCCGCCGTGAAACAAGGATGCTATAGTAGTAATGCTCGT----
-----------AATGGTGACAAGGAGGATAAGATAAAGTTGGAGGAGAAGAATATCAAGATGGCTTCACAGGTGTAGCTG
CGAAATACAGGGTTCTCTTACCGGCATGCAT-------------CAAGCAGGTCGGCCACGAGGAGTTGTTA-GTTTGAC
AGAGACTCTTGAGTGAAATGTATAATA-----------------------------------------------------
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>chr6A_973
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----------------------------------GTCGATC-------AGTCGGGAGAAGAAGCTAGGCATGTCGACGGA
TGCAGGGAAGAAGGTGTACGTTGTTGCAATGGTGATTCGGGTGATCTACACCGGCATGTACATCGTCTCCAAGGCGGCCT
TCGACGGCGGCATGAATACCTTTGTGTTCATCTTCTACCGCCAGGCAGCCGCCAGTCTTCTCTTGCTACCCCTCGCCATC
TTCCTTGAAAGGTAATTAACTAACTAATTAGT----TACTTAGTTACTCGATCAAGACATAACTAGC-------------
----------------------------------------------TGATCGA--------TCCCTC-TTAATATGAGTC
GTAT--------CCATGAATGTCAATGATTTTGCAGGAGAAACACGTCACCTATGTCACTGTGGTTGTTCACCAAGATAT
TCATGTATGCTTTACTCGGGTAAGAG-TAAGAGCACGACACCATTAACATTGCCCTTTGGATTCGTCGTTTGTTTTTTGC
TTAAATGGACCGAGGAAGTGATCGATCATATATAGGAGTACATGCGTACGTGTAACAGTAACAA----GTATTGCAC---
----ACGTACGCAGGAACACGGTGAGCATGAACCTGCACAACATGAGCCTCAAGTACACCTCCGCGACGGTGGCTTCAGC
CACGAGCAACTCCATCCCCGTCTTCACCTTCCTCTTCGCCGTCCTCCTACATTTCGAAGCCATCAAGCTCCGCACCGCCT
CGGGTAAAGCAAAGCTCGCCGGCGTCGCGCTCTGTGTCGCCGGGGTCCTTGTCATCGCCCTCTACGCCGGCCCGCCACTG
---------------------------AACCCCCTCAACCACCACCGCGCCTTC---------GCCGCCGCCATGGCCGG
CGGGAAGCAAGGGGATTGGATGAAAGGCACGTTCCTGATGCTCCTGGCCAACCTGACGTGGTCGCTCTGGATCGTCCTCC
AAGCGCGCCTCCTCACCGAGTACCCCAATAAGTTGCTAGCCACGACACTGCAATGCCTGCTCAGCACGGCACAGTCGCTC
GCCCTGGCGGCTGCGGTGACCGCTTT---CGGGAAGGACATGTCCGTCGTGTGGAGGCTACGGCTGGATGTGGGGCTCGT
CGCCTTGGCCTACTCCGGGTTCGTGGTGACGGGGGTGTCTTTCTACCTGCAGGCGTGGTGCATCGAGAGGCGAGGCCCCG
TGTTTCTGGCCATGACTAATCCGGTAGGGCTCGTGCTCACCATGTTCTGCTCCTCCTTCTTCCTCGGTGAGGTCGTTCAC
CTTGGCAGCGTCCTTGGCGGGGCGCTGCTGGTCGCCGGGCTGTACAGCGTGCTCTTGGGGAAGAGCAAGGAGCAGCAACA
GCCACCGCC-----------------------------------------------------------------------
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>chr6B_982
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--------------------------------------------------TCGGGAGGAGAAGCTAGGCATGTCGACGAA
TGCAGGGAAGAAGGTGTACATTGTTGCAATGGTGATACGGGTGATCTACACCGGCATGTACGTCGTCTCCAAGGCGGCCT
TCGACGGCGGCATGAATACCTTTGTCTTCATCTTCTACCGCCAGGCAGCCGCCAGTCTTCTCTTGCTACCCCTCGCCATC
CTCCTTGAAAGGTAATTCACTAACTATTTAGT----TACTTAGTTACTTGATCTGGATGTAATTCACCACCT--------
------------------A-------------------AAATTAGGTCATCCCCCTTAA---------------------
-TAT--------CTATGAATGTCAACGATTTTGCAGGAGAAACGCTCCACCCATGTCACTGTGGTTGTTCACCAAGATAT
TCATGTATGCTTTACTCGGATAAGAG-TAAGAGCACGACACCATTAACATTGCCTGC-GGATTCGTCGTTTGC-TTTTGC
TTAAATTGATCGAGGAAGTGATC------ATATA----TACATGCGTACTTGCAACAGTAACAA----GTATTGCAC---
----ACGTACGCAGGAACACGGTGAGCATGAACCTGCACAACATGAGCCTCAAGTACACCTCCGCGACGGTGGCTTCAGC
CACGAGCAACTCCATCCCCGTCTTCACCTTCCTCTTCGCCGTCCTCCTATATTACGAAGCCATCAAGCTCCGCACCGCCT
CGGGCGCAGCAAAGCTCGCCGGCGTCGCGCTCTGTGTCGCCGGGGTCCTCGTCATCGCCCTCTACGCCGGCCCGCC----
-----------------------GCTCAACCCCCTCAACCACCACCGCGCCTTC---------GCCGCCGCCATGGCCGG
CGGGAAGCAAGGGGATTGGATGGAAGGCACGTTCCTGATGCTCCTGGCCAACCTGACGTGGTCGCTCTGGATCGTCCTCC
AAGCGCGCCTCCTCACGGAGTACCCCAATAAGTTGCTGGCCACGACACTGCAATGCCTGCTCAGCACGCCACAGTCCCTC
GCCCTGGCGGCTGCTGTGACCGCTTT---CGGGAAGGACATGTCCGTCGCGTGGAGGCTACGGCTGGATGTGGGGCTCGT
CGCCGTGGCCTACTCCGGGTTCGTGGTGACGGGGGTGTCCTTCTACCTGCAGGCATGGTGCATCGAGAGGCGAGGCCCCG
TGTTTCTGGCCATGACTAATCCGGTAGGGCTCGTGCTCACCATGTTCTGCTCCTCCTTCTTCCTCGGTGAGGTCGTTCAC
CTCGGCAGCGTCCTTGGCGGGGCGCTGCTGGTCGCCGGGCTGTACAGGGTGCTCTTGGGGAAGAGCAAGGAGCA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>SNPs
------------------------S-S-------------------S-------------------------S-S-----
----SS--------------------------------------S----S-----------------S------------
--------------S---S--------S-----S---S--------------SS--------------------------
----------------------------------------S--------SSSS-SSSSS---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S-----------------------------------S--------------------------------------
----------------------------------S---------------------------------------------
-----------------------------------------------------------------S--------------
--S-----------------S----------------------------S------------------------------
----------S-------------------------S-SSSSSSSSS---------------------------------
----------------------------------------------------------------------S---------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S-SSSSSS------------------------------------------------------------S-------
------S---------------------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-S-------------------------------S-------------
--------------------------S-S-----S---------------------------------------------
---------------------------------------------------------------------S----------
----------S----------------------------S----------------------------------------
-----------------------S-----------------------S--S-------------SSSS------------
-----------------------------------------------------------S--------S-----------
---------------------------------------------S----------------------------------
----------------------------------------------------------------------S---------
-----------------------------------------------------------------------S--------
------------------------------------------------------------------------------S-
-----------------------S--------------------------------------------------------
----------------------S---------------------------S------------S----------------
------------------------------------------------S-------------------------------
-----S--------------------------------------------------------------------------
-----------------------------S--------S-----------------------------------------
--------------------------------S--------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------SSSSSSSS-----------------------
----------------------------------S---------------------------------------------
-------------------------------------------------------------------S------------
-----------------S---S----SS----S----S-SSSS-----------------S---------------S---
-----SS-----------S--------S--S----------S------S--------S------S---------------
------S---S-S----------S--------S----S---------------------------SS-SSSS--S-SSS-
SSSSSSSSSS----S-SS----S------------------S-------SS-----------------------------
----S---------------------S--SSS--------S---------S-SSS------------------------S
----------------------------S---------------------------------------------------
-------------------------------------------SSSSS-------S---S-------S---------S--
--------------------------------------------------------------------------------
-----S----------------------S--------------------S--S--S-S------------
>forward_130
--------------------------------------------------------------------------------
------------------------------TTCCTGACCGCGGATAACAG------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>reverse_2126
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------GCTCCATCTCGAAGCCATCA---------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>forward_1433
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GGAGAAGGAGGTAGCCATGC-------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>reverse_3447
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------CAAATTGGGCATCCTCACGC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
