>input_sequence_51786
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-----------------------------------------------------------GTAGCCAAGAAGAACCCAACC
CAAAGTAACCGCTGCGATTCCTTCCCTCAGAAGGGAAAAAAAAAAG----------GCATCCGCAGCCGCCGCGATGATC
CTCCGCATCCGCAGCCGCGACGGCACTGACCGCATCACGGTGCCGGACGCGGCCGCCGCCACGGTCGGCGACCTGCAGCG
CCTCATCGAGGCGCGCGCCACCGTGCCCGTCACCGCCCAGCGCCTCTCCCTCGACCCGGCCCTGCTCCTCCCCGCCCCGC
AGCCGCCGCTCCTCTCCGACCCGGCCGCGCCGCTCGCCTCCCTGCCCCTCGCCAACGGCTCCTTCGTCTACCTCTCGTAC
CCGGCCGGCGCGCGCGCCGCCCAGCCCCCGCCGCCCAGGGCCCTCACCGCCGCCGGCTCCTTCGGCAAGAAGATGACCAT
GGACGACCTCATCGCGCGCCAGATCCGGGTCACCCGCCAGGAGGCGCCCTTCTGCTCCGCGGCCTCCTTCGACCGCGACT
CGGCCAACGCCTTCCAGCTCCACGTCTCCGAGTCGCTCGCCTTCGCCGTCAAGCGGGCGGGGTTCCTCTACGGCCGCGTC
GACGCCGAGACCAAGGAGGTGCTGGTCGACTTCATCTACGAGCCGCCGCAGCAGGGGTCCTCGGACGTGGTCCACCTGAT
GCGGGACGCCGACGAGGAGGCCCGCGTGGACGCCATCGCCGACGGGCTCGGCATGCGCCGGGTAGGGTTCGTCTTCACAC
AGGCAGTCGGGAGGAAGGCCAGCGAGACGGGCGAGTACACCCTGTCCAACAGAGAGGTGGTCCAGGCCGCCCAGCTGCAG
GCAGAGGGCGGGATCCCGGAGTGGGTCACCGCCGTGGTGAAGCTGGAGGTTGGGGAGGACGGCTCGGCCGATGTGCACTT
CGAGGCGTTCCAGATGAGCGAGGTCTGCGTCAAGCTGTTCAAGGACGGCGTGCTGGAGACGGAGATCCAGGACTCCGACG
ACCCCCGCCTGTCCAAGATGCGCAAGGAGGTGATTGCAGGAGGGAAGGACACCATGGAGGTGGACAATGACTTCTTCCTG
GTGCCCGTGAAGATCTCCGATCACCAGGGCCCGCTCTCAATGGGATTTCCGATTGAAAACCGCGGAATTCCTCTGCCGGC
AAACGCTCTCAGGAGCCACATGGATCGTGCCAAGCATCTCCCATTCGTCAAGCGGATCTCTGATTTCCACCTGCTTCTCC
AGATCGCTGCTTTCCTGGATGTGAAGGCAGACGTTCCTACTCTGGCTGCGTGCGTGGGGCACCAGGCAGAGGTGCCTGAG
GGCTACCGGCTCCTGATCGACGCCTTGGCAGGTCAAACATAATCAGAGAGTCTTTCCTGAAACAAAGACACGGTGTCATT
TAGCAGCTTGCTCTCAGTCTCATCTCATGTGTGATTTATATGAATGTCTCAGGTGTGTAA--------------------
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>chr6B_1_TraesCS6B01G162100
GAGGCAGCGTAATATGTGTTCAGTAGATCTCACACCCTGTCTGCACTAGCACTTGTTGCTTTAAGAAATAAGA--C--TG
TCTTCGGCGAACAATAAGTGATTGACAGCTAGTGCATTGGGTGCAATAAAAAGACCACGAACTCCATTGTCATGTGCTTT
AAGCAAGCAAGATAGCCCTTCTACTGCCAACAAAAATAAGTAGGGAGATATCGGATCTCCCTAGCGTAATCCTCTCGACG
GCCTGGAAGTTTCCAAGCTACCACTGTTAAAAAGGACCGAAAAAGAAATAGATGAGACACACCTCATTACTGTCTCCGTA
AAACGGGGACTGGTTCCCAATTTGAGCATTACTTCCTTCAAATATGACCACTCTAGTCTGTCATACGCCTTCATCATATC
CAGCTTAAGTGCACAAAATAT--GTTGTCCTTAACTCTCATTATTTTCATGTAATGCAGACACTCATATGCAGTAATGAA
ATTGTCCGTGATTAGACATTCAGGAACAAACGCCCACTGCTCCTCAGAAATAACCTCGGGGAGAACACTTTTCAACCCGT
TTGCTAAGACCTTTGATGCGATTTTGTAAACCACATTGGAAAGGCTTATAGGCGGAAATTGTCCTAAA-TTTTT-GGACT
TGCTATCTTGAAAATAAGAATGATGAACGTTTGATTGATATCCTCCGGTGAGTCCTCTTCATTGAGCAACCTGATGATCA
TACATGTGACTTCCTCTCCACACAACTCTCAATGCCTCT-G-AAAAAGTGTGACGAAAAACCATCCAGACCAGGAGCCTT
AGTTGGAAACATTTGGAACAAAGCGTTTTTGACTTCCTCATTGATGTAAGGAGCGTTGTGTGGTTGGGCCGACCCACCAA
CCGGAATCGCGCGTGTGGAGTCGGAGAAAGAGCCCGTGTGGAATCGCGTGTGGCCGGCCCATGTTGCTGCCCGACACGGG
CTCATACAGACGCGCCTTT--------ATACATACACACCCCACTGCCGCCGAAGGC-AGTAGCCAAGAAGAACCCAACC
CAAAGTAACCGCTGCGATTCCTTCCCTCAGAAGGGAAAAAAAAAAG----------GCATCCGCAGCCGCCGCGATGATC
CTCCGCATCCGCAGCCGCGACGGCACTGACCGCATCACGGTGCCGGACGCGGCCGCCGCCACGGTCGGCGACCTGCAGCG
CCTCATCGAGGCGCGCGCCACCGTGCCCGTCACCGCCCAGCGCCTCTCCCTCGACCCGGCCCTGCTCCTCCCCGCCCCGC
AGCCGCCGCTCCTCTCCGACCCGGCCGCGCCGCTCGCCTCCCTGCCCCTCGCCAACGGCTCCTTCGTCTACCTCTCGTAC
CCGGCCGGCGCGCGCGCCGCCCAGCCCCCGCCGCCCAGGGCCCTCACCGCCGCCGGCTCCTTCGGCAAGAAGATGACCAT
GGACGACCTCATCGCGCGCCAGATCCGGGTCACCCGCCAGGAGGCGCCCTTCTGCTCCGCGGCCTCCTTCGACCGCGACT
CGGCCAACGCCTTCCAGCTCCACGTCTCCGAGTCGCTCGCCTTCGCCGTCAAGCGGGCGGGGTTCCTCTACGGCCGCGTC
GACGCCGAGACCAAGGAGGTGCTGGTCGACTTCATCTACGAGCCGCCGCAGCAGGGGTCCTCGGACGTGGTCCACCTGAT
GCGGGACGCCGACGAGGAGGCCCGCGTGGACGCCATCGCCGACGGGCTCGGCATGCGCCGGGTAGGGTTCGTCTTCACAC
AGGCAGTCGGGAGGAAGGCCAGCGAGACGGGCGAGTACACCCTGTCCAACAGAGAGGTGGTCCAGGCCGCCCAGCTGCAG
GCAGAGGGCGGGATCCCGGAGTGGGTCACCGCCGTGGTGAAGCTGGAGGTTGGGGAGGACGGCTCGGCCGATGTGCACTT
CGAGGCGTTCCAGATGAGCGAGGTCTGCGTCAAGCTGTTCAAGGACGGCGTGCTGGAGACGGAGATCCAGGACTCCGACG
ACCCCCGCCTGTCCAAGATGCGCAAGGAGGTGATTGCAGGAGGGAAGGACACCATGGAGGTGGACAATGACTTCTTCCTG
GTGCCCGTGAAGATCTCCGATCACCAGGGCCCGCTCTCAATGGGATTTCCGATTGAAAACCGCGGAATTCCTCTGCCGGC
AAACGCTCTCAGGAGCCACATGGATCGTGCCAAGCATCTCCCATTCGTCAAGCGGATCTCTGATTTCCACCTGCTTCTCC
AGATCGCTGCTTTCCTGGATGTGAAGGCAGACGTTCCTACTCTGGCTGCGTGCGTGGGGCACCAGGCAGAGGTGCCTGAG
GGCTACCGGCTCCTGATCGACGCCTTGGCAGGTCAAACATAATCAGAGAGTCTTTCCTGAAACAAAGACACGGTGTCATT
TAGCAGCTTGCTCTCAGTCTCATCTCATGTGTGATTTATATGAATGTCTCAGGTGTGTAAGTCTTGTTTAAAACTCGTAT
ATGCGATTACCATTGCACAAAGGGCGACATGTTTCATTTTGATGCTGAATCTGGTCATATACTGCTTGAAACGCAAGTCT
TTTTGGTGGTTTCAA-TGCCTAGATGTTTA--TTTTTTGACATTTTCATTGCCTGGATGTTTGGAAAGGGGCAAACATTG
ATTTTGCAAGGCCTGTTGACTCAGATGGTAA----------------TCACTGAGATAGGAACCAACACAAATAGGGGGA
TTGG-G-AAGGGTTGATCAATTTCTTGTATGGTTTTGAAAAATGAAACTGAAGATATGACTTTGGATGGTCTATTATGTT
TCTAAATATAGTCTA--TGCCATCGGACAACGCGCAGCGAGGGCAAGTCAGACCTGGGTAGGACTTGCGATGAACCACTT
ATCCAATTTTAGGACCAGATACTAGTATGACCCAACCGACACACCGGGAATACCTTTAGGACCTTCAACGCATTTTACTC
GTT-----ATCTACAGCAAAGTTATGCTGTTGAACTGATCTTTTCTACTCAAATTTCCTCTACATATCCAAGTAGAACGA
AGTGGTTGGATACCCATGTTT-TAGGTTGCTCAAGGAAGGGTGACATATTAATGTTGAAGTTTGGAAGTAAGGCCTGGAG
TTTTTGATACT---------CAGGAAGGCTTGTGTTAAAATCAGAGGACTAGAACAAAAGTGGTGTGGATGGAGT---GC
CTTGGACCATTTTGAGTCCTTTTTGGGCTCT-----------------TATAGACGTGGCTCGACAAGGAATTTTTCCAG
AATCGCTTCTATGTAGGTATAGTGAAGGTGTGATGTAGGTATCTATCTAAAATCCCACATGAGAGACTATTTGGCCTCAT
TGGTACTCCCTCCGTCCCATAATAAAAGAATGTTTTTGACGTTATGTTAGCTTCAAAAACGTTCTTATATTATGGGAGTA
ATTCTTTAGATTAGCTTAACTACTCAAGCAGCGATACAAATGGGAAAATGGGGCCAAGGGATGAACATGATGGAATGT
>chr4D_1
GAGGCAGCGCAATATGTGTTCAGAAGATCTCTTATCCTGGCTGCACCTACACTTGTTGCTTCAAAGAATAAGAGGC--TA
TCATCGGCGAACAATAAGTGATTGACAACCGGTGCATTGGGTGCAACCGAGAGACCCCGAACCCCACTATCATGTGCGTT
AAGCAAGCAAGATAGCCCTTCAGCTGCCAACAAAAATAAGTAGGGGGATATCGGATCTCCCTGCCGTAATCCTCTTGATG
GCCTGAAAGTTTCCAAACTACCACCGTTGAAAAGAACCGAAAAAGAAACAGACGAGATGCACCTCATTACTGTCTCCGTG
AACCGGGGGCTGATCCCCAACTTAAGCATTACTTCCTTCAAATAAGACCACTCTAGTCTATCATACGCCTTCATCTTATC
CAGCTTAAGTGCACAAAACAT--GTTGCCCTTAACTCTCTTTGTTTTCATGTAATGCATACATTCATATGCAGTGATAAA
ATTGTCCGTGATTAGGCGACCAGGGACAAACGTCGATTGCTCCTCAGAAATAACCTCGGGGAGAATACTTTTCAACCTGT
TTGCTAAGACCTTTGATGCGATTTTGTAAATCACATTACAAAGGCTTATAGGTCGAAATTGTCCTAAT-TTTTTTGGACT
TGCTATCTTGGGAATAAGAACGATGAACGTTTGATTGATATCCTCCAGTGAGTCATCTCCATTGAGCACCCTGAAGATCA
TACCTGTGACTTCCTCTCCACACAAATCCCAATGCTGCT-GAAAAAA-TGTGCCGGAAAACCATCCGGACCAGGAGCTTT
AGTTGGGAACATTTGGAACAAAGCGTTTTTTACTTCCTCATTCGTATAAGGAGCGTT-----------------------
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>chr4D_1
GAGGCAGCGGAATATGTGTTTAGAAGATCTCTTATCCTGGCTGCACCTACACTTGTTGCTTCAAAGAATAAGAGGCTATA
TCATCGGCGAACAATAAGTGATTGACAGCCGGTGCATTGGGTGCAACTGAGAGACCCCAGACCCCACTGTCATGTGCTTT
AAGCAAGCAAGATAGCCCTTCAGCTGCCA-----AAAAAGTAGGGGGATATCGGATCTCCCTGTCGTAATCCTCTTGAAG
TCCTGAAAGTTTCCAAGCTACCACCGTTAAAAAGAACCGAAAAAGAAACAGACGAGACGCACCTCATTACT-TCTCCGTG
AACCGGGGGCTGATTCCCAACTTAAGCATTACTTCCTTCAAATAAGACCACTCTAGTCTGTCATACGCCTTCATCATATC
CAGCTTAAGTGCACAGAACCT--GTTGCCCTTAACTCTCCTTGTTTTCATGTAATGTAGACATTCATATGCAGTGATGAA
ACTGTCCGTGATTAGGCGACCAGGGACAAACGCCAACTGCTCCTCAGAAATAACCTCGGGGAGAATACTTTTCAACCTGT
TTGCTAAGACCTTTGATGCGATTTTGTAAATCACATTACAAAGGCTTATAGGTCGAAATTGTCCTAAAATTTTTTGGACT
TGCTATCTTGGGAATAAGAACGATGAACATTTGATTGATATCCTCCAGTGAGTCATCTCCATTGAGCACCCTGATGATCA
TACCTGTGACTTCCTCTCCACACAAATCCCAATGCCACT-G-AAAAA-TGTGCCGGAAAACCATCCGGACTAGGAGTTTT
AGTTGGGAACATTTGGAACAAAGCGTTTTTTACTTCCTCATGCGTATAAGGAGCGTT-----------------------
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>chr3A_1
GAGGCAGCGCAATATGTGTTCAGAAGATCTCTTATCCTGGCTGCACAAACACTTGTTGCTTCAAAGAATAAGAGGC--TA
TCATCGGTGAACAATAAGTGATTGACAGCATGTGCATTGGGTGCAACCCAGAGACCCCGAACCCCACTATCATGTGCATT
AAGCAAGCAAGATAGCCCTTCAGCTGCCAACAAAAATAAGTAGGGGGATATCGGATCTCCCTGCCGTAATCCTCTTGATG
GCCTGAAAGTTTCCAAGCTACCACCGTTAAAAAGAACCGAAAAAGAAACCGACGAGACGCACCTCATTACTGTCTCCATG
AACCAGGGACTGGTCCCCAACTTAAGCATTACTTCCTTCAAATAAGACCACTCTAGTATGTCATACACCTTCATCATATC
CAGCTTGAGCGCACAGAACCT--GTTGCCCTTAACTCTCCTTGTTTTCATGTAATGGAGATATTCATATGCAGTGATGAA
ATTGTTCGTGATTAGGCGACCAGGGACAAACGCCGACTGCTCCTCAGAAATAACCTCGGGGAGAATACTTTTCAACCTGT
TTGCTAAGACCTTTGATGCGATTTTGTAAATCACATTACAAAGGCTTATAGGTCGAAATTGTCCTGAAA-----TGGACT
TGCTATCTTGGGAATAAGAACGATGAACGTTTGATTGATATCCTCCAGTGAGTCATCTCCATTGAGCACCCTGACGATCA
TACCTGTGACTTCCTCTCCACACAAATCCCAATCCCGCT-GAAAAATATGTGTCGGAAAACCATCTAGACCAGGAGCTTT
AGTTAGGAATATTTGAAACAAAGTGTTTTTTACTTCCTCATTTGTATAAGGAGCGTT-----------------------
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>chrUn_1
GATGCAGCACAATATGTGTTCAAAAGATCTCTTATCTTGGCTGCACCAACACTTGTTGCTTCAAAAAATAGAAGGC--TA
TCATCGGTGAACAATAAATGATTGACAGCAGGTGCATTGGGTGCAACCGAGAGACCCCAGACCCCACTATCATGTGCTTT
AAGCAAACAAGACATCCCTTCAGCTGCCAGTAAGAATAAGTAGGGGGATATTGGATCTCCCTATCGTAATCCTCTTGATG
GACTGAAAGATTTCAAACTACCACCATTAAAAAGGACCGAAAAGGAAACTGACGATACACACCTCATAACTGTCTCTGTG
AACCGTGGGCTGATCCCCAGTTTAAGCATAACTTCCTTCAAATAAGACCACTCTAGTCTATCATACGCCTTCATCATATC
CAGCTTGAGTGCACAGAACCT--GTTGCCTCTAACTCTCCTTGTTTTCATGTAATGCAAACATTCATAGGCAGTGATGAA
ATTATCTGTGATTAGGCGACCAGGAACAAACGCCGACTATTCCTCAGAAGTAACCTTGGGGAGAATACTTTTCAACCTGT
TTGCTAAGACCTTTGATGCGATTTTGTAAATCACATTACACAGGCTTATAGGCCGAAACTGTCCTAGGA-TTTTTGGACT
TGCTATCTTGGGAATAAGAACGATGAACGTTTGATTTATATCCTCTAATGAGTCATCTCCATTGAGCACCCTGATGATCA
TACCCGTGACTTCCTCTCCATACAACTCCCAATGCCGCT-GAAAAATGTGTGCCGGAAACCCATCCGAACCTGGAGCTTT
AGTTGGGAACATTTGAAATAGGGCATTTTTCACCTCCTCATTTGTGTAAGGAGCATTG----------------------
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>chr4A_4
---GCAGCACAATATGTGTTCAAAAGATCTCTTATCTTGGCTGCACCAACACTTGTTGCTTCAAAAAATAGAAGGC--TA
TCATCGGTGAACAATAAATGATTGACAGCAGGTGCATTGGGTGCAACCGAGAGACCCCAGACCCCACTATCATGTGCTTT
AAGCAAACAAGACATCCCTTCAGCTGCCAGTAAGAATAAGTAGGGGGATATTGGATCTCCCTATCGTAATCCTCTTGATG
GACTGAAAGATTTCAAACTACCACCATTAAAAAGGACCAAAAAGGAAACTGACGATACACACCTCATAACTGTCTCTGTG
AACCGTGGGCTGATCCCCAGTTTAAGCATAACTTCCTTCAAATAAGACCACTCTAGTCTATCATACGCCTTCATCATATC
CAACTTGAGTGCACAGAACCT--GTTGCCTCTAACTCTCCTTGTTTTCATGTAATGCAAACATTTATAGGCAGTGATGAA
ATTATCTGTGATTAGGCGACCAGGAACAAACGCCGACTATTCCTCAGAAGTAACCTTGGGGAGAATACTTTTCAACCTGT
TTGCTAAGACCTTTGATGCGATTTTGTAAATCACATTACACAGGCTTATAGGCCGAAACTGTCCTAGGA-TTTTTGGACT
TGCTATCTTGGGAATAAGAACGATGAACGTTTGATTTATATCCTCTAATGAGTCATCTCCATTGAGCACCCTGATGATCA
TACCCGTGACTTCCTCTCCATACAACTCCCAATGCCGCT-GAAAAATGTGTGCCGGAAACCCATCCGAACCTGGAGCTTT
AGTTGGGAACATTTGAAATAGGGCATTTTTCACCTCCTCATTTGTGTAAGGAGCATTG----------------------
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>chr2B_11
----------AATATTTGTTAAGAAGATCTCTTATTTTGGCTGCACCTACACTTGTCGCTTCAAAAAATAGAAGGC--TA
TCATCGGTGAACAATAAATGATTGACAGCAGGTGCATTGGGTGCAACCGAGAGACCTCGGACCCCACTGTCTTGTGCTCT
AAGCAAACAAGATAGCCCTTCAACTGCCAGTAAGAATAAGTAGGGGGATATCGGATCTCCCTGCCATAATCCTCTTGATG
GACTGAAAGATTTCAAACTACCACCGTTAAAAAGGACCAAAAAAGAAACTGATGAGACACACCTCATTACCGTCTGTGTG
AACCGGGGGATGATTCCCAATTTAAGCATAACTTCCTTCAAATAAGACCACTCTAGTCTATCATACGCCTTCATCATATC
CAGCTTGAGCGCACAGAACCT--GTTGCCTGTAACTTTCCTTGTTTTCATGTAACGCAAACATTCATAGGCAGTGATGAA
ATTGTCTGTGATTAGGCGACCAGGAACAAACGCCGTCTGCTCCTCAGAAATAACCTCGGGGAGAATACTTTTCAACCTGT
TTGCTAAGACCTTTGGTGCGAA-----AAATCACATTACATAGGCTTATAGGCTGAAACTATCCTAAAA-TTTTTGGACT
TGCTATCTTGGGAATAAGAACGATGAACGTTTGATTTATATCCTCCAATGAGTCATCTCCATTGAGCACCCTGATGATCA
TACCTGTGACTTCCTCTCCACACAACTCCTAATGCCGCT-GAAAAAAGTGTGCCGAAAACCCATCCGGACCCGGAGCTTT
AGTTGGGAACATTTGGAACAAAGCATTTTTCACTTCCTCATTTGTGTAAGGAGCATT-----------------------
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>chr7B_155
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------------------------------------------------------------------------------TT
CAGCAAGCAAGAAAGTCCCTCCGCTGCAAGCAGAAATAAATATGGCTAGATTGGATCTCCCTGCCTTAGCCCCCGAGTCG
GCCTGAAACCATCCAGACAACCACCATTAAACAAAACCGAGAAAGTGACTGAAGAGACACACCTCATTACAGTCTCCATA
ATTCTAGGGCTGAAACCTAGTTTGATCATCACCGCCTTCAGATACGGCCACTCCAAACGATCATACGCCTTCATCATATC
CAGCTTAAGCGA--AAAATCT--ATTTCCCTTCACCCTTCTTGTTTTCATATAATGCAAACACTCGTAGGCCGTGAGAAA
ATTGTCTGTAATGAGATGTCCTGGGACAAAAGCAGACTTCTCTTCAGAGATGATATCGGGGAGAAATAATTTCAGCCGGT
TAGCTAAGACCTTTGACGCAATCTTATAGATTACGTTACAGAGACTTATAGGGCGAAATTGTCCTAAAA-CTTTTGGACT
GGAGATCTTGGGAATTAATACGATGAACATGTTGTTTATATCCTCCGGGGAATCAGCTCCATCAAGCACTCGGATTATCA
TCCTAGTAACCTCATCACCACACAAATCCTAGTGTTTCTAG-AAGAAGTGCGCGGGAAAACCGTCTGGGCCAGGTGCCTT
GGTTGGAAACATCTGAAACAGGGCCTCTTTAACCTCCTC-----------------------------------------
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>chr2A_248
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-----------TCCAAACTTCCACCATTAAAAAGGACAGAAAAGGAGACCGAAGACACGCATCTCATAACCGTATTCGTA
AACCTAGGGCTGATCCCAAGTTTTAACATCACCGCCTTCAAATAAGGTCACTCTAGTCTGTCATACGCCTTCATCATATC
AAGGTTCAAAGC--ACAAAAACGATTACCCTTTACTCTTCTGGTTTTCATATAGTGTAGGCACTCATAGGCTGTGATAAA
ATTATCAGTGATAAGTCAACCGGGAACAAACACCGACTGCTCTTCGGAGGTGACATCGGGGAGGATAAGTTTCAGCCTGT
TAGCTAAGACCTTTGAGGCGATCTTGTAGATCACATTACAAAGACTTATTGGCCGAAATTGCCCTAAAA-CTTTTGGACT
AGCAATCTTTGGAATCATTACGATGAACGTTTTGTTTATGTCCTCCGGGGAATCCTCTCCTTCAAGCACTCTAATGGTCA
TTCTTGTTACTTCATCACCGCAAAGGTCCCAGTGCCTTT-GAAAAAAATATGCCGGAAAACCGTCTGGACCAGGTGCTTT
TGTTGGGAACATCTGAAGAAGAGCCTCTTTGACCTCCTC-----------------------------------------
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>chr3A_263
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--------------------------TTAAATAGGACAGAAAAAGAAACTGAAGTTACACACCGCATAATCGTAGCAGTA
AAGCGCGGACTAAAGCCCATCTTGAGCATAACCGCCTCCAGATATGTCCATTTGATTCTGTCATAAGCTTTCATCATGTC
TAGCTTGAGCGC--ACAATATCGATTCCCCTTTGCTCTCCTTGTTTTCATGTAATGCAGACACTCATATGCTGTGATAAA
GTTGTCCGTTATAAGGCGTCCAGGAACAAAAGCCGATTGCTCTTGGGAAATAACCTCTGGGAGTATAATCTTCAACCTGT
TTGCTAAGACCTTCGATGCGATCTTGTAGATCACATTGCAAAGGCTTATAGGTCGAAACTGTCCTAACA-GTTTTAGACT
TGCTATTTTTGGAATCATAACGATGAACGTGCGGTTGATTTCCTCCGGTGAGTCATCTCCATTGAGCACCCTAGTGATCA
TGCCCGTTACCTCATCACCACAAACCTCCCAGTGCCACT-GAAAAAAGTGAGCCGGAAAACCATCCGGTCCAGGAGCCTT
GGTGGGAAACATCTGAAAGAGCGCAATTTTAATCTCTTCCTTAGTGTAAGGAGC--------------------------
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>chr6D_849
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----------------------------------------------------------TGTTGTTGGGCCGACCCATCAA
CCGACTCCAGCCAGAA----TCGGAGAAAGAGCCCGTGCGGAATCTCCTGTGGCCGGCCCATCTTGCTGTCCGACACGGG
CTCATACAGACGCGCCTTT--------ATACATACACCA-------CCGCCGAAGGCAAGTAGCCAAGCAGAACCCAACC
CAAAGCAACCGCTGCGATTCCTTCCCTCAGAAGGAAAAAAAAAAAGAAGAGG-AAAGCATCCGCAGCCGCCGCGATGATC
CTCCGCATCCGCAGCCGCGACGGCACTGACCGCATCACGGTGCCGGACGCGGCCGCCGCCACCGTCGGCGACCTGCAGCG
CCTCATAGAGGCGCGCGCCACCGTGCCCGTCGCCGCCCAGCGCCTCTCCCTCGACCCGGCCCTGCTCCTCCCCGCCCCCC
AGCCGCCGCTCCTCGCCGACCCGGCCGCGCCGCTCGCCTCCCTGCCCCTCGCCAACGGCTCCTTCGTCTACCTCTCGTAC
CCGCCCGGCGCGCGCTCCGCCCAGCCCCCGCCGCCCAGGGCCCTCACCGCCGCCGGCTCCTTCGGCAAGAAGATGACCAT
GGACGACCTCATCGCGCGCCAGATCCGGGTCACCCGCCAGGAGGCGCCCTTCTGCTCCGCGGCCTCCTTCGACCGCGACT
CGGCCAACGCCTTCCAGCTCCACGTCTCCGAGTCGCTCGCCTTCGCCGTCAAGCGGGCGGGGTTCCTCTACGGCCGCGTC
GACGCCGAGACCAAGGAGGTGCTGGTCGACTTCATCTACGAGCCGCCGCAGCAGGGGTCCTCGGACGTGGTCCACCTGAT
GCGGGACGCCGACGAGGAGGCCCGCGTGGACGCCATCGCCGACGGGCTCGGCATGCGCCGGGTGGGGTTCGTCTTCACAC
AGGCGGTCGGGAGGAAGGCCAGCGAGACGGGCGAGTACACCCTGTCCAACAGCGAGGTGGTCCAGGCCGCCCAGCTGCAG
GCGGAGGGCGGGATCCCGGAGTGGGTCACCGCCGTGGTGAAGCTGGAGGTGGGGGAGGACGGCTCGGCGGACGTGCACTT
CGAGGCGTTCCAGATGAGCGAGGTCTGCGTCAAGCTGTTCAAGGACGGCGTGCTGGAGACGGAGATCCAGGACTCCGACG
ACCCCCGCCTCTCCAAGATGCGCAAGGAGGTGATTGCAGGAGGGAAGGACACCATGGAGGTGGACAACGACTTCTTCCTG
GTGCCGGTGAAGATCTCCGATCACCAGGGCCCGCTCTCAATGGGATTTCCGATTGAAAACCGTGGGATTCCTCTGCCGGC
GAACGCTCTCAGGAGCCACATGGATCGTGCAAAGCATCTCCCGTTCGTCAAGCGGATCTCTGATTTCCACCTGCTTCTCC
AGATCGCTGCTTTCCTGGATGTCAAGGCCGACGTGCCTACTCTGGCTGCGTGCGTGGGACACCAGGCCGAGGTGCCAGAG
GGCTACCGGCTCCTGATCGACGCCTTGGCAGGTCAAACATAACCAGAGAGGGTTTCCTGAAACAAAGACACGGTGTCATT
TAGCAGCTTGCTCTCAGTATCATCTCATGTGTGATTTATATGAATGTCTCAGGTGTGTAAGTCTTGTTTAAAACTCGTAT
ATGCGATTACCATTGCACAAAGGGCGACATGTTTCATTTTGATGCTGAATCTGGTCATATACTGCTTGAAACGCAAGTCT
TTTGGTGGTTGTATATTGCCTAGATGTTTAGTTTTTTTTACATTTGCATTGCCTATATGTTGGGAAAGGGACAAACATTG
ATTTTGCAAGGCCAGTTCACTCAGATGGTAAC---CACTGAGATAGTTTGCTGAGATAGCAACCAACACAAATAGGGGGA
TTGG-GCAAGGGTTGATCAATTTCTTGTATGGTTTTGAAAAATGAAACTGAAGATATGACTTTTGAGGGTCTATTATATT
TCTAAAAATAGTCTATGTGCCATCAAACAATGCGCCATGAGGGCAAGTCTGACCTGGGTAGGACTTGTGATGAACCACTT
ATCCACTTTTAGGACCTGATACTAGTATGACCCAACCGACACACCTGGAATACCTTCAG--------ACGCATTTTACTC
GTTTAGTTATCTACAAGAAAGTTAGGATGTTGAACTGATCTTTTCTACTCAAATTTCCTCCACGTATCCAAGTAGAAC-A
AGTGGTTGGATACCCATGTTT-TGGTTTGCTCAAGGAGGGATGACATA-TAATGTTGAAGTTTGGAAGTAAGGCCTGGAG
TTTTTGATACTCAGGAAGGCCAGGAAGGCTTGTGTTAAAATCAGAGGACTACAACAAAAGTAGTGTGGATGGAGTGCGGC
CTTAGACCATTTTGAGTCCTTTTGGGGCTCT-----------------TATAGATGTGGATCAACAAGGAATTTTTCCAG
AATCTCTTTTAGGCAGGTAGAGTGAAGGTGTGATGTAGGGATCTATCT----------------------TTGGCCTCAA
TGGTAATTCTTTGGATA---------------------------------------------------------------
-----------TAGGTTAGCTATTTAAGCAGCGATACAAATGGGAAAATGGGGCTAAGGGGTGAACATGATGGAATGT
>chr6A_923
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----------------------------------------------------GCCGGCCCATGTTGCTGCCCGACACGGG
CTCATACAGACGCGCCTTTAACTCTACATACACCCACCA-------CCGCCGAAGGCAAGTAGCCAAGCAGAACCCAACC
CAAAGCAGCCGCTGCGATTCCTTCCCTCAGAAGGGGAAAAGAAAGGGAAAAAAAAAGCATCCGCAGCCGCCGCGATGATC
CTCCGCATCCGCAGCCGCGACGGCACTGACCGCATCACGGTGCCGGACGCGGCCGCCGCCACCGTCGGCGACCTGCAGCG
CCTCATCGAGGCGCGCGCCACCGTGCCCGTCGCCGCCCAGCGCCTCTCCCTCGACCCGGCGCTGCTCCTCCCCGCCCCGC
AGCCGCCGCTCCTCTCCGACCCGGCCGCGCCGCTCGCCTCCCTGCCCCTCGCCAACGGCTCCTTCGTCTACCTCTCGTAC
CCGCCCGGCGCGCGCTCCGCCCAGCCGCCGGCGCCCCGGGCCCTCACCGCCGCCGGCTCCTTCGGCAAGAAGATGACCAT
GGACGACCTCATCGCGCGCCAGATCCGGGTCACCCGCCAGGAGGCGCCCTTCTGCTCCGCGGCCTCCTTCGACCGCGACT
CGGCCAACGCCTTCCAGCTCCACGTCTCCGAGTCGCTCGCCTTCGCCGTCAAGCGCGCGGGCTTCCTCTACGGCCGCGTC
GACGCCGAGACCAAGGAGGTGCTGGTCGACTTCATCTACGAGCCGCCGCAGCAGGGGTCCTCGGACGTGGTCCACCTGAT
GCGGGACGCCGACGAGGAGGCCCGCGTCGACGCCATCGCCGACGGGCTCGGCATGCGCCGGGTAGGGTTCGTCTTCACAC
AGGCAGTAGGGAGGAAGGCCAGCGAGACGGGCGAGTACACCCTGTCCAACAGCGAGGTGGTCCAGGCCGCCCAGCTGCAG
GCAGAGGGCGGGATCCCGGAGTGGGTCACCGCCGTGGTGAAGCTGGAGGTGGGGGAGGATGGCTCGGCGGACGTGCACTT
CGAGGCGTTCCAGATGAGCGAGGTCTGCGTCAAGCTGTTCAAGGACGGCGTGCTGGAGACGGAGATCCAGGACTCCGACG
ACCCCCGCCTGTCCAAGATGCGCAAGGAGGTGATTGCAGGAGGGAAAGACACCATGGAGGTGGACAACGACTTCTTCCTG
GTGCCCGTGAAGATCTCCGATCACCAGGGCCCGCTCTCAATGGGATTTCCGATTGAAAACCGTGGAATTCCTCTACCGGC
GAACGCTCTCAGGAGCCACATGGATCGTGCAAAGCATCTCCCGTTCGTCAAGCGGATCTCTGATTTCCACCTGCTTCTCC
AGATCGCTGCTTTCCTGGATGTCAAGGCCGACGTTCCTACTCTGGCTGCGTGCGTGGGACACCAGGCAGAGGTGCCAGAG
GGCTACCGGCTCCTGATCGACGCCTTGGCAGGTCAAACATAACCAGAGAGGGTTTCCTGAAACAAAGACACGGTGTCATT
TAGCAACTTGCTCTCAGTATCATCTCATGTGTGATTTATATGAATGTCTCAGGTGTGTAAGTCTTGTTTAAAACTCGTAT
ATGCGATTACCATTGCACAAAGGGCAACATGTTTCATTTTGATGCTGAATCTGGTCATATACTCGTTGAAATGCAAGTCT
TTTGGTGGTTGTATATTGCCTAGATGTTTAGTTTTTTTGACATTTGCATTGCCTAGATGTTGGGAAAGGGACAAACATTG
ATTTTGCCATGCCAGTTCACTCAGATAGTAACCAACACTGAGATAGTTCGCTGAGATAGTAACCAAGACGAATAGGGGGA
CTGGAG-AAGGGTTGATCAATTTCTTGTATGGTTTTGAAAATTGGG-CTGGAGATATGACTT---AGGGTCTATTATGTT
TCTAAAAATAGTCTATGTGCCTTCGGACAATGCGTCGCGAGGGCAAGTCAGAC---------------------------
-----CTTTTAGGACCAGATACTAGTATGACCCAACCGACACACCCGGAATACCTTTAG--------ACACATTTCACTC
AGTTAGGAT-----------------------------------------------------------------------
-GTTGTATGATACCCATGTTTTTGGTTTGCTCAAGGAGGGGTGACATA-TAATGTTGAAGTTTTGAAGTAAGGTCTGGAG
TTTTTGATACTCAGGAAGGCCAGGAAGGCTTGTGTTAAAATCAGAGGACTACAATAAAAGTGGTGTG---GGAGT---GC
CTTATACCATTTTGAGTCCCTTTTGAGCAAGGGATTTTTCCAGAACCATATAGCTGTGGATCGACAAGGAATTTTTCCAG
AATCTCTTTTAGGTAGGTAGAGTGAAG--GTGATGTAGGGATCTATCCAAAACCCCACATGAGAGACTATTTGGCCTCAA
TGG-----------------------------------------------------------------------------
------------------------------------------------------------------------------
>SNPs
---------S-------------S-------SS-S----S------S-S------------S--S--------------S
--S--------------------------SS---------------SSS-S-----S-----S---S-------------
---------------------S-----------------------S-----------------S-----------S----
-----S------------------S-----------------------S-------------------------------
--S-----------------------------------------------------------------------------
---------------------------S-----------S--S-------------------------------S-----
-------------------S--------------S------------------------------S-----------S--
------------------------------S-------S--------------S--------------------------
----------SS--------S-------------------------------------S---------S-----------
---S------------------------S-----------------------S---------------------------
------------------------------------------SS-----------------S--------------S---
---SSSS-SSS-SSSSSSSS------------------S------S-S--------------------------------
-------------------------------------SSSSSSSSS----------------------S-----------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
---S-----------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------S-----------------S--S--------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------S-----------------
S-----------------------------S-----------S-------------------------------------
----------------------S-----S-----------------------------S-----------------S---
------------------------------------------S-------SS----------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
---S-SS-S-S-SS-------------------------------S--------S------S--------S---------
-------------S---S-------------------------------S---------S--------------------
---------------------------------------------------------------S--S-------------
------S-----------------------S----S-------------------------------S------------
-----S---------------------------------------S-------------SSSSSSSS-------------
---------------SS-------S-S---------------------------------S--S--------------S-
-----------------------S-S-----------S----------S-------------------------------
---------------------------------------------------S----------------------------
---S--------------------------------------------------S----S--------------------
----S---S--S-------S-------------------S------------S--------------------------S
-----S-S-S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS---S---S---S-S-----------------------------S-----S-----------------
>forward_699
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------ATCCTCCGGTGAGTCCTCTT---------------------
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>reverse_2269
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----------------------------AGACGTTCCTACTCTGGCTG--------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>forward_926
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--------------------------AAAGAGCCCGTGTGGAATCG----------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_2615
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------------------------------------------------------GGATGTTTGGAAAGGGGCAA------
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------------------------------------------------------------------------------
