>input_sequence_51779
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---------------------------------------------------------------------ATGGCGCCCGC
G---------GAGACGGAGAAATCCATTACTCTTCCACCAACACACTTTGTTCTCGTCCCGCTCATGGGGCAGGGCCACA
CCACCCCCATGGCCGACCTTGCATGCCTCATCGCAGGACGCGGCGTGCGAGTGAGCCTCGTCACCACGCCCGTCAACGCC
GCGCGCCTGCGGGGACTAGCCGACAGGGCGCGGAGCGCCATGTTGCCGCTGGAAATTGTCGAGCTCCCATTCCCGCCGGC
CCATGACGGGCTGCCCCGGGGCAGCAGCGACAATAGCGACAGTGTCCTCCAATTGTTCCTGTCCCTCTATAGGCTCGCCG
GGCCACTCGAGGCCTACGTGCGCTCGCTGCCCTGGCGCCCCAGCTGCATCATCTCCGACTCCTGCAACCCGTGGACGGTC
GGCGTCGCCAGGAGCCTCGGGGTCCCTCGGCTCACCTTCACCGGCCCATCCTGCTTCTACTCACTCTGCGACTTCAACGT
CGCCAAGCACGGGCTTCTTCACAGAGGCGACGATCACACGTGCGTCGTGCCGGGCATGCCGGTGCGAGTGGACTTGAGCA
AGGACACATGGGCCGCTGCCTTCTTAACTTGCATTCCTGCATGGGGGAAGTTCGTGGAGGAGGTGAGGGAGGGCATCCGC
ATGGCCGACGGCGCCGTGGTGAACACGTTCCTCGGCCTCGAAGAACAGTTTGTTGCGTGCTATGAGGCAGCGCTGGGCAA
GCCGGTGTGGGCGCCCGGGCCCTTCTTCCTCAATAGCCGGAACGAGGAGGCTCGCACCGTAAACCAGAGCGCGGTCACCG
CTTGGTTGGACAAGATGGACCAGAGCACGGTCGTCTATGTAAGTTTCGGCAGCCTCGCGCAGATGCTTCCCAAGCAGCTG
TACGAGATCGGACACGGCCTCGAGGACTCTGGGAAGCCATTCCTTTGGGTGGTGAAGGAGTCCGAGACGGTTTTGCCAGA
AGCGAAAGAGTGGCTCCAAGCCCTCGAGACGCGCACGGCAAGGCATGGGCTCGTAGTGCATGGCTGGGCGCCTCAGGTCG
CCATCCTGTCACACCGCGCCGTAGGTGGCTTCATGACCCACTGCGGGTGGAACTCGCTGCTGGAGTCCGTCGCGCAAGGC
GTGCCTGTCGTGACGTGGCCTCACTTCGGTGACCAGTTCCTCAATGAGAGGCTTGCGGTGGACGTACTTGGCGTCGGCGT
GCCAGTTAGGCCGTTCGATGCCGAAAAGGCCGTGGACCCTGTAGTGCGGGGGCACATTGCGCGAGCAGTGTCGGAGCTTA
TGGGCGATGGGGCAGTGGCAGAGGAGAGGAGGAGAAAGTGCAAGGAGTACCGGGAGAGAGCTCACGGAGCCATGGCGAAA
GGAGGCTCGTCGCATGAAAACCTGACGCTGCTATTACACAGCTTCATGCGGAGTGGCCGCAAGGAATAG-----------
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------------------------------------------------------------
>chr4D_1_TraesCS4D01G005400
TCTCAAACGACTCAGGGTGTAGCGAAGCTAAGCTAATAATGCCGCTAAAAAGAAACATTACGGTCACTCAAGAAAAAGGA
AAGGGAAGAAAAGTACACGCACCGTGCTCCATGATGGTCTGGTGAAACAGGGGCATCGCCCGCGGCACGACGTCATGGCT
GCCCAGCGGCATGGTCCGGGACCTGGCTTCCTTGTGGAGACGCTCCATAAACGGTGCGTCGCCGGCAACGGAATGGTACG
CCCTGCCCCGGAGGCCCTGCGCCCGCAGCTCCCACTCCAGGCGCCGGGGCCTCCACCACGCCCACTCCAGCGCCCTCACG
GCGCACCACGCCAGAACGGCGCCAGCCACCGCGTACACATGCACCAGCGGCTGCTGCTCCCATGGAAAAGAGTCTTCTAC
CACGCTCGTCGCCATGCTTATGCTTTGACCGTCGTTAGTTTGAGGGGA-------------------------ATGGGAA
TGATGTTTTACGC--------------------------------GTGGTGGCTGCTCACCGTTGCACTGCTATATACTA
GTACTGTGTTTGTTCTATTGCTACTCCCTCCAATCCATATTAGTTATCTTAAATTTGTCTAAGATACGAATGTATCTGGT
CAGAGGGAGTAGATTGCGAAAATGTCTTACATTGTAGATAGAGGTAAGTATAATCTACTCGGGTGCTCACGTTAGAAACC
AAAACCGGACATCAAGGAAAATGTGTGTACGAACACGTGAATTACACGTGCAACCCGCAC---TATCATATGTGCAGCTT
TGTAGCTTTGTCTTTTGGCCCGTTGCATTTGCTGGGAGGACACGACATGCATGGGAGTACGCGCTTGGCCAACAGCCGAG
CACAGAGGCACATCACATGTGATGGCTAGTTTTTTGTGTTTTGTTTTGTTGAATTCCCGCTGTACGTGTTCCCTTTTCAT
AGATTCCTTAAGCAGATGGACAACAAATAGAGGCGTTGGGGACTACTCCTAATAGATAGAGGCACATTTTCA--------
-------------------------------------CACCGTTGGTACCGCGTACAC----GTCAACAATGGCGCCCGC
G---------GAGACGGAGAAATCCATTACTCTTCCACCAACACACTTTGTTCTCGTCCCGCTCATGGGGCAGGGCCACA
CCACCCCCATGGCCGACCTTGCATGCCTCATCGCAGGACGCGGCGTGCGAGTGAGCCTCGTCACCACGCCCGTCAACGCC
GCGCGCCTGCGGGGACTAGCCGACAGGGCGCGGAGCGCCATGTTGCCGCTGGAAATTGTCGAGCTCCCATTCCCGCCGGC
CCATGACGGGCTGCCCCGGGGCAGCAGCGACAATAGCGACAGTGTCCTCCAATTGTTCCTGTCCCTCTATAGGCTCGCCG
GGCCACTCGAGGCCTACGTGCGCTCGCTGCCCTGGCGCCCCAGCTGCATCATCTCCGACTCCTGCAACCCGTGGACGGTC
GGCGTCGCCAGGAGCCTCGGGGTCCCTCGGCTCACCTTCACCGGCCCATCCTGCTTCTACTCACTCTGCGACTTCAACGT
CGCCAAGCACGGGCTTCTTCACAGAGGCGACGATCACACGTGCGTCGTGCCGGGCATGCCGGTGCGAGTGGACTTGAGCA
AGGACACATGGGCCGCTGCCTTCTTAACTTGCATTCCTGCATGGGGGAAGTTCGTGGAGGAGGTGAGGGAGGGCATCCGC
ATGGCCGACGGCGCCGTGGTGAACACGTTCCTCGGCCTCGAAGAACAGTTTGTTGCGTGCTATGAGGCAGCGCTGGGCAA
GCCGGTGTGGGCGCCCGGGCCCTTCTTCCTCAATAGCCGGAACGAGGAGGCTCGCACCGTAAACCAGAGCGCGGTCACCG
CTTGGTTGGACAAGATGGACCAGAGCACGGTCGTCTATGTAAGTTTCGGCAGCCTCGCGCAGATGCTTCCCAAGCAGCTG
TACGAGATCGGACACGGCCTCGAGGACTCTGGGAAGCCATTCCTTTGGGTGGTGAAGGAGTCCGAGACGGTTTTGCCAGA
AGCGAAAGAGTGGCTCCAAGCCCTCGAGACGCGCACGGCAAGGCATGGGCTCGTAGTGCATGGCTGGGCGCCTCAGGTCG
CCATCCTGTCACACCGCGCCGTAGGTGGCTTCATGACCCACTGCGGGTGGAACTCGCTGCTGGAGTCCGTCGCGCAAGGC
GTGCCTGTCGTGACGTGGCCTCACTTCGGTGACCAGTTCCTCAATGAGAGGCTTGCGGTGGACGTACTTGGCGTCGGCGT
GCCAGTTAGGCCGTTCGATGCCGAAAAGGCCGTGGACCCTGTAGTGCGGGGGCACATTGCGCGAGCAGTGTCGGAGCTTA
TGGGCGATGGGGCAGTGGCAGAGGAGAGGAGGAGAAAGTGCAAGGAGTACCGGGAGAGAGCTCACGGAGCCATGGCGAAA
GGAGGCTCGTCGCATGAAAACCTGACGCTGCTATTACACAGCTTCATGCGGAGTGGCCGCAAGGAATAGTAGATTCGGAA
TTGTTAGGCACTCAATTCCGTTGCTCTGCTAGGTGAAGTGTGAATCGTGCTAAACTGTCAAAGGATAACAAATGGTCCAA
ATCTCTAGTATCAATGCTCAAGAATATCCCTACCACTTGGTTATTTTGCCCACTAGAAATGGACATCCCCTCCTCGAACC
TTTTCCACCACCAAAAGGGGTTACCAGTATGTGGGCATAT-TTTTTTTTACTATTATCTGAAT-----------------
-------------CAAATAATACTTATAATACTAATACCTTTCTTGAGGCGGTAAGGTATGTCGGTACAAGGTTCACTAT
ACTGTTGGATGTATACGCAAGAGACTATAATATTTGTTATTTACATCTGTTTCAAAAATTATGTTTCATGATTTTATGCT
ATAACTGCTATGGTTCATGAATGTGAGATTCAGAGAAAAACCCATGCGCACGTGTAGAAACATGAACACAACTTTATACC
TTTTGTCTAGTCTCTTAGACGAACTCGTTAACACCAGATGACTCCGTTTTCATGGTCATGGGCAATTGAATCTCAATGAG
GGCACATTGTTGTTTCAACAATGTGGCTGGGTAGACCCATCTAGCTAATATACTACGAGACGTTGTTATTGGTTTTATTA
AATAGTATCATCACTAAAAAGATTTACTTGTTTTTATCCTTGAACCAAGAGAGTGTTGAGATGATGTATGCTAGAAGGAT
CACTTTGGTCTACCAAGTATCATCCGTAACAGGGTGCTAAAAAAAGTTGTCATTGAGTTATCTAGGGACTACACATTTGG
TCTTAATAGTTCAAGAATTGAAATTGCTCCTCTAGATAATAGAGAGATACTTTTAGGCTTCACTCAGTATGAAAGCATTT
ACAAACAAGTCTGCACAGACAACGGCATGATGCATATCATGGGAATACTTGAATACAGGAACGAGAAAAGGTGTCATGCC
AGTAACGAGGATAAGTAGACATAGTGATTGAAGGGTTCACTCACGGGATGTCAAATATCT
>chr4A_18
TGTG-----------------GCGAAGGTAAACTAATAATGCGGCTAAAAAGAAACATTACAA----TCAAGAAAAAAGA
AAGCAATGAAAAGTACACGCACCGTGCTCCTTGATGGTCTGGTGAAACAGCGGCATCGCCCGCGGCACGACGTCATGGCT
GCCCAGTGGCATGGTCTGGGACCTGGCTTCCTTATGGAGACGCTCCATAAACGGTGCGTCGCCAGCGACATAGTGGTATG
CCCTGCCCCGGAGGCCCTGCGCCCGCAGCTCCCGCTCTAGGTGCCGGGGCCTCCACCATGCCCACTCCAGCGCCCTCACG
GCGCACCACACCAGAACCGCGCCAGCCACTACGTAAACATACACCCAGCGCTGGTGCTCCCATGGAAAAGAGTCTTCTAT
CACGCTCGTCGCCA------TGCTTTCACCTTCCTTATTTTGTGGGGAACAGA-------TAGCCCAAGGGATATGGGAA
TGATGTTTTTCCTTTGCTGA----GTTGATCAAGTGGGTGTACGAGCGGTGG---------------CTGCTATATACAA
GTACTATGTTTGTTCTA---CTACTCCCTCTGATCCATATTCGTTATCTTAGATATGTCT-AGATACGAATCTATCTGAT
CAGAGAGAGTAGATTGCAAAAATGTCTTACATTGTAGACAGAGGTAAGTATAATCTACTCGGGTGCTCACGTTAGAAACC
AAAACCGGACATCAAGGAAAGTGTCTGTACGATCACGTGAATTACACGTGCAACCCTATCGGTTATCGTGTGTGCAGCTT
TGTAGCTTTGTCTTTTGGCCCGTCGCATTTGCTGGGAGGACACGA-ATGCATGGGAGTACGCGCTTGGCCAACAGCCGAG
CACAGAGGCACATCACATATGATGGATAGTTTTTTGTGTTTTGTTTTGTTGAATTCCCGCTGTACGTGTTCCCTTTTCAT
AGATTCCTTAAGCACATGGACAACAGATAGAGGCGTTGGGGACTACTCCTATTAGATAGAGGCACATTTTCA--------
-------------------------------------CACCGTTGGTACCGCGTACAC----GTCAACAATGGCGCCCGT
G---------GAGACGGAGAAATCCATTACTCTTCCACGAACACACGTTGTTCTCGTCCCGCTCATGGGGCAGGGCCACA
CCACCCCCATGGCCGACCTTGCGTGCCTCATTGCGGGACGCGGCGTGCGAGTGAGCCTCGTCACCACGCCCGTCAACGCT
GCGCGCCTGCGGGGACTAGCCGACAGGGCGCGGAGCGCCATGTTGCCGCTGGAAATTGTCGAGCTCCCATTCCCGCCGGC
TGACGACGGGCTGCCCCGGGGCAGCAGCGACAATAGCGACAATGTCCTCCAATTGTTCCTGTCCCTCTATAGGCTAGCCG
GGCCACTCGAGGCGTACGTGCGCTCGCTGCCCTGGCGCCCCAGCTGCATCATCTCCGACTCCTGCAACCCGTGGACGGTC
GGCGTCGCCAGGAGCGTTGGGGTCCCTCGGCTCACCTTCACCGGCCCTTCCTGTTTCTACTCGCTCTGCGACTTCAACGT
CGTAAAGCACGGGCTTCTTCACAGCGGCA------------ACGTCGTGCCGGGCATGCCGGTGCGAGTGGAGTTGAGCA
AGGACACATGGGCCGCTGCCTTCTTAACTTGCATGCCTGCGTGGGGGAAGTTCGTGGAGGAGGTGAGAGAGGGCATCCGC
ACGGCCGACGGTGCCGTGGTGAACACGTTCCGGGGCCTTGAGGAACAGTTCGTCGCATGCTACGAGGCAGCGTTGGGCAA
GCCGGTGTGGGTGCTCGGGCCCTTCTTCCTCAATAGCCGGGACGAGGAGGCACGCACCATAGACCAGAGCACAGTCATCG
CTTGGCTGGACATGATGGACCAAAGCACGGTCGTCTATGTCTGTTTCGGCAGCCTCGCGCAGATGCTTCCCAAGCAGCTG
TACGAGATCGGACACGGCCTCGAGGACTCTGGGAAGCCATTCCTTTGGGTGGTGAAGGAGTCCGAGACGGTTTTGCCAGA
AGCAAAAGAGTGGCTCGAAGCCCTCGAGATGCGCACGGCAGGGCATGGGCTCATAGTGCATGGCTGGGCGCCTCAGGTCG
CCATCCTGTCACACCGCGCCGTAGGTGGCTTCATGACCCACTGCGGGTGGAACTCGCTGCTGGAGTCCGTCGCGCAAGGC
GTGCCTGTCATGACGTGGCCTCACTTCGGTGACCAGTTCCTCAATGAGCGGCTTGCGGTGGACGTACTTGGCGTCGGCGT
GCCAGTTAGGCCGTTCGATGGCGAAAAGGCCGTGGACCTTGTAGTGCGGGGGCACATTGCGCGAGCAGTGTCGGAGCTGA
TGGGCGATGGGGCAGTGGCAGAGGAGAGGAGGAGAAAGTGCAAGGAGTACCGGGAGAGAGCTCACGGAGCCATGGCCAAA
GGAGGCTCGTCGCATGGAAACCTGACACTGCTATTACGCAGCTTCATGCGGAGTGGCAGCAAGGAACAGGTTAATTCCGT
--------------------TTGCTCTGCTAGGTGAAGTGTGAATCGTGCTCAAGAATATCC------------------
----CTAGTATCAATGCTCAAGAATATCCCTACCACTTGGTTATTTTGCCC-----------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr4B_33
--------------------------------CTAATAATGCGGCTAAAAAGAAACATTACGGTAGAGA---AAAAAAGA
AAGCAAAGAAAAGTACACGCACCGTGCTCCTTGATGGTCTGGTGAAACAGCGGCATCGCCCGCGGCACAACGTCATGGCT
GCCGAGGGGCATGGTCCGGGACCTGGCTTCCTTGTGGAGACGCTCCATAAACGGCGCGTCACCGGAGACGGAGTGGTACG
CCCTGCCCCGGAGGCCCTGCGCCCGCAGCTCCCGCTCCAGACGCCGGGGCCTCCACCACGCCCACTTCAACGCCCTCATG
GCGCACCATGCCAGAACCGCGCCAGCCACCGCGTACACATACACCAGCCACTGCTGCTCCCATGGAAAAGA---TTCTAT
CCCGCTCGTTGCCA------TGCTTTCGCCGGCGTTGGTTTGTGGGGACTGGGGAATAGCTAGCCCAAGGGGAATGGGAA
TGATGGTTTTCCTTTGCTGATCGAGTTGATCAAGTGGTTGTGCGAGTGGTGGCTGCTCACCGTTGCACTGCTATATAATA
GTACTGTGTTTGTTCTATTGCTACTCCCTCCGATCTATATTAGTTATCTTAAGTTTGTCT-AGATATGAATGTATCTGAT
GATCTGATCAGAGGG-------------------------------AGTATAATCTACTCAGGTGCTCACGTTAGAAACC
AAAACCGGACATCAAGGAAAATGTCTGTAGGATCACGTAAATTACACGTGCAACCCGCAC---TATCATATGTGCAGCTT
TGTAGCTTTGTCTTTTGGCCCGTTGCATC-----GGACGACACGACATGCATGGGAGTACGCGCTTGGCCAACAGCCGAG
CACAGAGG-----CACATGTGATGGCTAG-TTTTTGTGTTTTGTTTTGTTGAATTCCGGCTGTACGTGTTCCCTTTTCAT
AGATTCCTTAAGCACATGGACGGCATTTAGAGGCGTTGGGGACTACTCCTATTAGATAGAGGCACATTTTCACACCATTG
GTACAGCTTTTTGTAGCTCGATCGATTCTTCTTCTCGCACCGTTGGTACCGCGCGCATACATGTCAACAATGGCGCCCGT
G---------GAGACGGAGAAATCCATTACTCTTCCACCACCACACTTTGTTCTCGTCCCGCTCATGGGGCAGGGCCACA
CCACCCCCATGGCCGACCTTGCATGCCTCATTGCAGGACGCGGCGTGCGAGTGAGCCTCGTCACCACGCCCGTCAACGCC
GCGCGCCTGCGGGGACTAGCCGACAGGGCGCGGGGCGCCATGTTGCCGCTGGAAATTGTCGAGCTCCCATTCCCGCAGGC
CGACGACGGGCTGCCCCGGGGCAGCAACGACAATAGCGACAATGTCCTCCAATTGTTCCTGTCCCTCTATAGGCTCGCCG
GGCCACTCGAGGCCTACGTGCGCTCGCTTCCCTGGCGCCCCAGCTGCATCATCTCCGACTCCTGCAACCCGTGGACGGTC
GGCGTCGCCAGGAGCGTCGGGATCCCTCGGCTCACCTTCACCGGCCCTTCCTGCTTCTACTCGCTCTGCGACTTCAACGT
CGCCAAGCACGGGCTTCTTCACAACGGCGT------------CGTCGTGCCAGGCATGCCGGTGCGAGTGGAGTTGAGCA
AGGACACATGGGCCGCCGCCTTCCTAACTTGCATGCCTGCCTGGGGGAAGTTCGTGGAGGAGGTGAGGGAGGGCATCCGC
ATGGCCGACGGCGCCGTGGTGAACACGTTCCTGGGCCTCGAGGAACAGTTCGTCGCATGCTACGAGGCAGCGCTGGGCAA
GCCGGTGTGGGCGCTCGGGCCCTTCTTCCTCAATAGCCGGGACGAGGAGGCACGCGGCGTAGACCAGAGCGCGGTCATCG
CTTGGCTGGACATGATGGACCAAAGCACGGTCGTCTATGTCTGTTTCGGTAGCCTCGCGCAGATGCTTCCCAAGCAGCTC
TATGAGGTCGGACACGGCCTTGAGGACTCTGGGAAGCCGTTCCTTTGGGTGGTGAAGGAGTCCGAGATGGTGTTGCCGGA
AGCGCAAGAGTGGCTCCAAGCCCTCGAGGCACGTACGGCAGGGCAGGGGCTCATAGTGCATGGATGGGCGCCTCAAATCG
CCATTCTATCGCACCGCGCCGTAGGTGGCTTCATGACGCACTGCGGGTGGAACTCCCTGCTGGAGTCCGTCGCGCATGGC
GTGCCTGTCATAACGTGGCCTCACTTCGGCGACCAGTTCCTCAACGAGTGGCTTGCTGTGGACGTACTTGGGGTGGGCGT
GCCCGTGATGCCATTCGGTAACGACAAGGCC---------ATGGTGCGGGGGCACATTGCGCGAGCAGTGTCGGAGCTGA
TGGGCGGCGGGGCAGTGGCAGAGGAGAGGAGGAGAAAGTGCAAGGAGTACAAGGAGAGAGCTCACGGAGCCATAGCGAAA
GGAGGCTCATCGCATGAAAACCTGACGCTGCTATTACACAGCTTCATGTGGAGTGGCAGCAAGGAAGAGTAGATTCGGAA
TTGTTAGGCCTCAATTCCA-TTGCTCTGCTAGGTGAAGTGTGAATTGTGCTAAACTGTCAAAGGACAACAAATGGTCCAA
ATCTCTAGTATCAATGCTCAAGAATATCCCTACCACTTGGTTATTTTGCCCACTAGAAATGGACATCCCCTCCTCGAACC
TTTTCCACCACCAAAAGGGG-TACCAGTATGTGGGCATTTATTTTTATTACTATTATCTGGATTGATAAATTTTCAAGAA
CCAGATCAATAATCAAATAATACTTATAATACTAATACCTTTCTCGAGGCGGTAAGGTATGTCGGTATAAGTTTCAATAT
ACCATTGGATGTATACGCAAGAGACTATACTATTTGTTATTTACATCTGTTTCATAATTTATGTTTCATGATTTTATGGT
ATAACTGCTATGGTTCACGAATGTGAGATTCAGAGGAAAACCCATGCGCATGTGTAGA-ACATGAACACAACTTTATACC
TTTTGTCTAGTCTCTTAGA-GAACTCATTAACACCAGATGACTCCGCTTTCATGGTCAAGGGCGATTGAATGTCAATGAG
GGCACATTCTTGTTTCAACAATGTGGCTGGGTAGACCCATCTAGCTGATATACTACGAGACGTTGTTATTGGTTTTATTA
AATAGTATCATCACTAAAAAGACTTACTTGTTTGTATCCTTGGACGATGAGAGTGTTGAGATGATGTATGCTAGAAGGAT
CACCTTGGTCTACCAAGTATCATGCGTAACAGGGTGGTCAAAAAGGTTGTTATTGGGTTATCTAGAGAGTATACATTTGG
TCTTAATAGTTCAAGAATGGAAATTGCTCCTCTAGATAATAGAGAGATACTTTTAGGCTTCACTCGGTATGAAAGTATTC
ACAAACAAGTGTGCACAGACAATGGCATGATGCATATCATGGGAATACTTGAATACAGGAACGAGAAAAGGCGTCATACC
AGTAACGAGGATAAGTAGACATAGTGATTGAAGGGATCACTCATGGGATGTCAAATA---
>chr4D_993
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---------------------------------------------------------C----GTCAACAATGGCGCCCGC
GACGGCGACGGCCATAGAGACATCCATAATCCTTCCAC---CGCACTTTGTTCTCGTCCCGCTCATCGGGCAGGGCCACA
CCATCCCCATGTCGGACCTTGCCTGCCTCCTCGCGGGACGCGGTGCGAGAGTGAGCCTCGTCACCACGCCCGTCAACGCC
GCGCGCCTCGGGGGAGTAGCCGACAGGGCGCGGCGTGCCATGCTGCCCCTGGAGATAGTTGAGCTCCCGTTCCCGTCGGC
CGACGATGGACTGCCCACTGGCAGCACCGCCAGCGTCGACAGCTTCCTCCGGTTGTTCCTGGACCTCTACAGGCTCGCCG
GCCCGCTCGAGGCCTACGTGCGCGCGCTGCCGCGGCGCCCCAGCTGCATCATCTCGGACGCCTGCAACCCATGGACAGCC
GGCGTCGCAAGGAGCGTCGGGGTCCCGCGGCTCTTCTTCCACGTGCCTTCCGTCTTCTACTCTCTCTGCGACCTGAACGT
CGCAACGTATGGCAAGGACGACCACAACGCGT------CGTATGTCGTGCCGGGCATGCCGGTGCGTGTAGAGATGACCA
AGGAGACATGGTCCTCCTCCTTCTATAC---CACGCCTGAGTGGGAGCAGTTCACCAAGGAGGCGCGGGAGGGCATGCGC
TCAGCCGATGGCGCCGTGATGAACACCTTCCTAGGCCTCGAGCAACAGTTCGTCACGTCATACGAGGCGGCACTGGGCAA
GCCGGTGTGGGCGCTCGGGCCCTTCTACCTCGGTAACCGGCGGGATGAGGACG---CCATCCACCAGAGCACGGTCACCG
CTTGGCTCGACAAGATGGACAAGGACACCGTCATTTATGTCAATTTTGGCAGCCTCGTGCAGATGCCTCCCAAGCAGCTG
TACGAGGTCGGACACGGCCTCGAGGACTCTGGGAAGCCGTTCCTTTGGGTGGTGAAGGAGTCCGAGACGGCGTTGCCAGA
AGCGCAAGAGTGGCTGCAAGCCCTAGAGGCACGCACGGCAGGGCAGGGGCTCATACTCAGTGGCTGGGCGCCACAGCTCG
CCGTCATGTCGCACCACGCCGTAGGTGGCTTCATGACCCACTGTGGGTGGAACTCCCTGCTAGAGTCCATCGCGCACGGC
GTGCCTGTCGTGACGTGGCCTCACTTCAGCGACCAGTTCCTCAACGAGAGGCTGGTCGTGGAAGTACTTGGGGTCGGCGT
GCCCTTGATGCCGTCCGGTAACAACAGGGCC---------GTGATGCGGGGGCACATTGCGCGAGCAGTGTCAGAGCTGA
TGGGCGATGGGGAGGTGGCAGAGGAGAGGAGGAGAAAGTGCAAGGATTACGGGGAGAGAGCTCATGCAGCCGTAGCGAAA
GGAGGATCGTCGCATGAAAACCTGACGCGGCTATTACAGAGCTTCATGCCGAGTGGCAGCAAGGAACTGTAGATT-----
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>chr4B_993
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---------------------------------------------------------C----GTCAACAATGGCGCCCGC
GACGGTGACGG------AGACATCCATAATCCTTCCAC---CACACTTTGTTCTCGTCCCGCTTATTGGGCACGGCCACA
CCATCCCCATGTCGGACCTTGCCTGCCTCCTCGCGGGACGCGGTGCGAGAGTGAGCCTCGTCACCACGCCCGTCAACGCG
GCGCGCCTGGGGGGACTAGCCGACAGGGCGCGGCACGCCATGCTGTCCCTGGAGATAGTCGAGCTCCCATTCCTGCTGGC
CGATGATGGACTGCCCACTGGCAGCACCGCCAGCGTTGACAGCTTCCTCCGGTTGTTCCTCGGCCTTTACAGGCTCGCCG
GGCCGCTCGAGGCCTATGTGCGTGCGCTGCCGCGGCGCCCAAGCTGCATCATCTCCGACGCCTGCAATCCGTGGACGGCC
GGCGTCGCAAGGAGCGTTGGGGTCCCGCGGCTCTTCTTCCACGTGCCTTCCGTCTTCTACTCGCTCTGCGACCTGAACGT
CGCAACGTGTGGCCAAGGCAACCATGGCGCAT------CGTATGTCGTGCCGGGCATGCCGGTGCGCGTAGAGATGGCGA
AGGAGACATGGTCGTCGTCCTTCTATAC---CACGCCTGAGTGGGAGCAGTTCACAAAGGAGGCGCGGGAGGCCATGCGC
ACGGCCGACGGTGCCGTGATGAACACCTTCCTAGGCCTCGAGCAACAGTTCATCACGTCCTATGAGGCGGCACTGGGCAA
GCCGGTGTGGGCGCTCGGGCCCTTCTGCCTCGGTAACCGGCGGGAGAAGGAGG---CCGTCAACCAGAGCCCGGTCACCG
CCTGGCTCGACAAGATGGACGAGAACACGGTCATTTATGTCAATTTCGGCAGCCTCGTGCGGATGCCTCCCAAACAGCTG
TACGAGGTCGGACAAGGCCTCGAGGACTCTGGGAAGCCATTCCTTTGGGTGGTGAAGGAGTCCGAGACGGCGTTGCCAGA
AGCGCAAGAGTGGCTCCAAGCCCTGGAGGCACGAACGGCAGGGCAGGGGCTCATATTGCGTGGCTGGGCGCCTCAACTCG
CCATCATGTCGCACCGTGCTGTAGGCGGCTTCATGACCCACTGTGGGTGGAACTCCCTACTAGAGTCCATTGCGCACGGC
GTGCCTGTCGTGACGTGGCCTCACTTCAGCGACCAGTTCCTCAACGAGAGGCTGGTCGTGGAAGTACTTGGGGTCGGCGT
GTCCTTAATGCCGTTCGGTAAGGATACGGCC---------GTGGTGCGGGGGCACATTGCGCAAGCGGTGTCGGAGCTGA
TGGGCGATGGGGCGGTGGCAGAGGAGAGGAGGAGAAAGTGCAAGGATTATGGGGAGAGAGCTCATACAGCCGTAGCGAAA
GGAGGATCGTCCCATGAAAACCTAACGCGGCTATTACAGAATTTCATGCCGAGTGGCAGCAAGGAACTGTAGATT-----
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>chr4A_993
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---------------------------------------------------------C----GTCAACAATGGCGCCCGC
GACGGCGACGGCGATAGAGACATCCATAATCCTTCCAC---CACACTTTGTTCTCGTCCCGCTCATCGGGCAGGGCCACA
CCATCCCCATGTCGGACCTTGCCTGCCTCCTCGCGGGACGCGGTGTGAGAGTGAGCCTCGTTACAACACCTGTCAACGCC
GCGCGTCTACAGGGTGTAGCCGACAGGGCGCGGCGCGCCATGTTGCCCCTGGAGATAGTTGAGCTCCCGTTCCCGCCGGC
CGACGACGGGCTGCCCCCTGGCAGCACCGCCGGCATCGACAGCTTCCTCCGGTTGTTCCTGGACCTCTACAGGCTGGCCG
GGCCGCTCGAGGCCTATGTGCGCGCGCTGCCGCGGCGCCCCAGCTGCATCATCTCCGACGCTTGCAACCCGTGGACAGCC
GGCGTCGCAAGGAGCGTCGGGGTCCCGCGGCTCTTCTTCCACGTGCCTTCCATCTTCTACTCGCTATGCGACCTGAACGT
GGCAACGTATGGCAAGGGCGACCACGACACGT------CGTACGTCGTGCCGGGCATGCCGATGCGCGTAGAGATGACCA
AGGAGACATGGTCGTCCTCCTTCTATAC---CACACCCGAGTGGGAGGAGTTCACCAAGGAGGCGCGGGAGGGCATGCGC
TCATCCGATGGCGCCGTGATGAACACCTTCATGGGCCTCGAGCAAGAGTTCATCACTTCCTATGAAGCGGCACTTGGCAA
GCCTGTCTGGGCGCTTGGGCCCTTTTTGCTCGGTAACCGGCGGGACGAGGAGG---CCGTCTACCATAGCGCGGTCACCG
CTTGGCTCGACAAGATGGACCAGAGCACGGTCATTTATGTCAATTTTGGCAGCTTGGTGCAGATGCCTCCCAAGCAGCTG
TACGAGGTTGGACACGGCCTCGAGGACTCTGAGAAGCCGTTCCTTTGGGTGGTGAAGGAGTCTGAGACGGCGTTGCCAGA
AGTGCAAGAGTGGCTCCAAGCCCTGGAGGCACGCACGGCAGGGCAGGGACTCATAGTGCATGGTTGGGCGCCTCAGCTCA
CCATCATGTCGCACCACGCCGTAGGCGGCTTCATGACCCACTGTGGGTGGAACTCCCTGCTAGAGTCCATCGCGCACGGC
GTGCCTGTCGTGACGTGGCCTCAGTTCAGCGACCAGTTCCTCAACGAGAGGCTGGTCGTGGAAGTACTTGGGGTCGGCGT
GCCCTTGATGCCGTCCGGTAACAACAGGGCC---------GTGATGCGGGGGCACATTGCGCGAGCAGTGTCAGAGCTGA
TGGGCGATGGGGCTGTGGTAGAGGACAGGAGGAAAAAGTGCAAGGATTACGGGGAGAGAGCTCATGCATCCGTAGCGAAA
GGAGGATCGTCGCACGAAAACCTGACGCGGCTATTACAGAGCTTCATGCCGAGTGGCAGCAAGGAACTGTAGATT-----
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>SNPs
-S-SSSSSSSSSSSSSSSSSS------S---S----------S---------------------SSS----------S--
---SS-------------------------S-------------------S-----------------------------
------S-----------------------------------------------------------S-----S-------
---------------------------------S----------------------------------------------
-----------------S----------------------S-------S------------------------------S
--------------SSSSSS------S---------------S-------------------------------------
---------S-SS-------------------------------------------------------------------
-------------------------------S----------------------------S-----------------S-
-----------------S--------------------S-----------------------------------------
------------------------S-------S-----------------------------------------------
--------------------------------------------------------------------------------
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--------------S----------S-------------------------S----------------------------
--------------------------------------------------------------------------------
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-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S-------------------------------S--------------S-----------------
------------------------S----SSSSSSSSS---S------------------------------S-------
----------------------------------S-----S---------------------------------------
--------------------------------S--------S--------S--S--------------------------
--------------S-------------------------S----------S----------------------------
-----S----------------------------------S---------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S-----------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------S---------------------------------------S-
--------------------------------------------------------------------------------
---------------------------------------------------------S--------S-------------
---------SSSS-S-S-SS---------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------S-----------------S-------S-------------S-------------------
--------------------------------------------S----------------------S---S----S---
--SS-------------------------S------------------------S--S--------------------S-
-----------------S-----------------S--------------S-------S---------------------
-------------------S------S-------------------S-----------S----S-------S--------
--------S-------------------------------------S---------------------------------
----------------------S----------S--------S--S-S--------------------------------
---S-------------------S------------S-S-----S-----S----S---------S--S--S--------
------------------S----------------------------------------------S---------S---S
----------S-----------S------------------------------------------------S-----S--
-----------------------------------S-------S-------------SSS
>forward_658
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GGT
CAGAGGGAGTAGATTGCG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>reverse_1793
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CGGCCTCGAAGAACAGTTTG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>forward_1637
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TTCACAGAGGCGACGATCAC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>reverse_2845
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TGAGGCGGTAAGGTATGTCG----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
