>input_sequence_51730
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---------------------------------------ATGT-----TGAATCATCGGGGGATGTTAAATCGCGTCAAC
TCGGCGGCCAGGGTCGCCATACTGCTGGCTCTGCTCTGCTTTTGCTCTGCCACCTCTTCCTACTCTTTCCCCGACGACAC
GGCCTGTGCCCGTGCC------AGTGGCATGGCGATGCCGGGTCCGGGTAATCTCCTCACGGTCGACCAATCCGGCAAAG
GCGATTACAGGAAGATCCACGAGGCGATCGCCGCCGCCCCCGCGAACAGCTCCGCCCGCACTGTCATCCTGATCAAGCCC
GGAATCTACAGGCAAGT-ACCGCAAATGACCATTACCTTCTGAATTCTGAATTCTGA--------------TACGTGGTG
TGGTGCATGCCTGATCGCCTGGAATCTGTCGTTGCAGGGAGAAGATCGTCGTCCCCGTGGACAAGCCCAACATAACACTT
TTCGGCACGAGCGCCAACACGACCGTGATCACCTGGAACGAGCGCTGGGTATCCAGCGACACTTCCCCTACCGTGTCCGT
TCTGGCCTCCGACTTCGTCGCCAGCCGCTTAACGTTCCGGGTAAGTCTGCCATCCATAGTTCGTGATTGCAAAGAAAGAG
CGAGACGCGGGTGCTGACAGTTTCTTGCTAATTTTCTCGGGGTTTTAGAACACGTTGGGGACCAGCGCTCCGGCCATTGC
GGCGAGAGTCATGGGAGACAGGGCGGCGTTCTACGGGTGCAGCTTCTCGTCGTTCCAAGACACGCTCCTCGACGATAACG
GGCGCCATTACTACTGCGGGTGCTACATCGAAGGTGGCACCGACTTCATCTGCGGGAACGGCCGGGCTCTCTTTGAAGTA
AGTAC---ATGTTCACCCTTCTCACCAGCAAACCCGTGCGCATAGATGATA-----------------------------
-------------------------------------------------------------------GATCATACGTACT
TACCCCGTACGTACG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------AGAGGTTGCTGCCAAGTGCCAAGATCAACTAACAATG----GTTCGTGTGCAGAAATGCCACCTGCA
CTCCACCTCGCCCAACGGCGGCGCGTTCACGGCGCAGAAGCGGGCGTCCGAGTTGAACCACACCGGATACAGCTTCGTCA
GGTGCAAGCTGACCGGCGTCGGGGTCAGCACCTCCATCCTGGGGCGTCCATGGGAGCCCTACTCCCGCGTCGTGTTCGCT
CTCACCTACATGTCCGCAGCGGTGAGCCCTCGAGGCTGGGATGACTGGAACCACACCGCCAACCAGAGGTAAACTTAG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TCTTACTCCGCTGCCA
TTTTCCCGCCAAAGGAAGACCAATATATGACGCGCTTTGGCCTGGGTTTGCAACTTTGCAT-----GCAGGACGGCGTTC
TACGGGCAGTACCAATGCTACGGCCAAGGGGCGAAAACTGATGGTAGGGTTAAGTGGGCTCGCAACCTCTCGCCAATCGA
AGCAGCCCCCTTCATGACCAAGGCCTGGATCGGTGGGCAGCAGTGGCTTCCGAAGCAGCCCCCTTCATGA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>chr3B_1_TraesCS3B01G258100
TGCTTGTGATAAACAACAAATTAAAGATTGTACAAGTGCGCGCAGTGCATGAAGGTGGCACGGTAGTGCAGTCTCAAACC
GGAAATCCTTCGTCAGAAAGCTT-GTCATCTTTCCCTCCCTTGATGGATTTCTTAATACTATGTGTTTTGGGTCTTCGCT
GATGGTGACGAACAATAATTAAGAGTAAATTATGTGGCCTCTCAGCAGCCATTTTGTCAGGGGAAGCACGGTGACAGCCG
GTCGTCGACGAGCAGTCATGCATGAGCTTGTAACTTGTAAGCAGCCTAGT---------GAGATTTTTTGTTCTCTGTGT
GAGCCGTTGCGTTCGATCTCTATTGGTTTGACCATCAAAAAATGAATGAAGAAGAAAACTAAATTTGGGACC--------
TGGCAAATAAAAGGTGAATCTCGCTGACCATC-----TCCCGTTCAATCTAACAGTGCAGTGCAGCATATAACAAGATTA
CTAAGATCATCAACCATGAGATATCCAAAGTTCAATTCATCGTCAAATTTATTTCCCATACACCATGATTAGATGGAGTG
CATGAACGATGCACACCCTAGGGGCAGTCTGAAAC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TGGTCAGATAGTTTGTTAGCTTTCC
TTGAAAGGATTTCTTCAGCTCTTGGAGCTGTCCTTCACATGTGTCGATGGTTATGGAAAACAATGTGCCATCTAAGCA--
--------AAACTAGTTCATGTATAGGAGAAAGCAAACACCCTTTTCTTCTCTTCCAGGTCAGCAATGAGCAATTATCTT
ACGTGATTTCTTTTCTGAAGATAAGGCTAAAGTCACCAACCACA------------------TTTAGGACAACTGTTTAT
GTGCATCTCTACTTGTGAGACATTCACGAGCCGATTTCTCGTGATGGAGGGGTTTTCTTTGTTCCAAAGTTACTGAAAGA
CCACAAAAAGGATCACATGAGAGTGAGCTTGCACCGATCCGCTGATGCACCCTCCACTCCACATATACTATAAAGCCATC
CGCCTGCA--------ACGAACGCGATCAGCGTGCCTTGATGT-----TGAATCATCGGGGGATGTTAAATCGCGTCAAC
TCGGCGGCCAGGGTCGCCATACTGCTGGCTCTGCTCTGCTTTTGCTCTGCCACCTCTTCCTACTCTTTCCCCGACGACAC
GGCCTGTGCCCGTGCC------AGTGGCATGGCGATGCCGGGTCCGGGTAATCTCCTCACGGTCGACCAATCCGGCAAAG
GCGATTACAGGAAGATCCACGAGGCGATCGCCGCCGCCCCCGCGAACAGCTCCGCCCGCACTGTCATCCTGATCAAGCCC
GGAATCTACAGGCAAGT-ACCGCAAATGACCATTACCTTCTGAATTCTGAATTCTGA--------------TACGTGGTG
TGGTGCATGCCTGATCGCCTGGAATCTGTCGTTGCAGGGAGAAGATCGTCGTCCCCGTGGACAAGCCCAACATAACACTT
TTCGGCACGAGCGCCAACACGACCGTGATCACCTGGAACGAGCGCTGGGTATCCAGCGACACTTCCCCTACCGTGTCCGT
TCTGGCCTCCGACTTCGTCGCCAGCCGCTTAACGTTCCGGGTAAGTCTGCCATCCATAGTTCGTGATTGCAAAGAAAGAG
CGAGACGCGGGTGCTGACAGTTTCTTGCTAATTTTCTCGGGGTTTTAGAACACGTTGGGGACCAGCGCTCCGGCCATTGC
GGCGAGAGTCATGGGAGACAGGGCGGCGTTCTACGGGTGCAGCTTCTCGTCGTTCCAAGACACGCTCCTCGACGATAACG
GGCGCCATTACTACTGCGGGTGCTACATCGAAGGTGGCACCGACTTCATCTGCGGGAACGGCCGGGCTCTCTTTGAAGTA
AGTAC---ATGTTCACCCTTCTCACCAGCAAACCCGTGCGCATAGATGATA-----------------------------
-------------------------------------------------------------------GATCATACGTACT
TACCCCGTACGTACG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------AGAGGTTGCTGCCAAGTGCCAAGATCAACTAACAATG----GTTCGTGTGCAGAAATGCCACCTGCA
CTCCACCTCGCCCAACGGCGGCGCGTTCACGGCGCAGAAGCGGGCGTCCGAGTTGAACCACACCGGATACAGCTTCGTCA
GGTGCAAGCTGACCGGCGTCGGGGTCAGCACCTCCATCCTGGGGCGTCCATGGGAGCCCTACTCCCGCGTCGTGTTCGCT
CTCACCTACATGTCCGCAGCGGTGAGCCCTCGAGGCTGGGATGACTGGAACCACACCGCCAACCAGAGGTAAACTTAG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TCTTACTCCGCTGCCA
TTTTCCCGCCAAAGGAAGACCAATATATGACGCGCTTTGGCCTGGGTTTGCAACTTTGCAT-----GCAGGACGGCGTTC
TACGGGCAGTACCAATGCTACGGCCAAGGGGCGAAAACTGATGGTAGGGTTAAGTGGGCTCGCAACCTCTCGCCAATCGA
AGCAGCCCCCTTCATGACCAAGGCCTGGATCGGTGGGCAGCAGTGGCTTCCGAAGCAGCCCCCTTCATGACCAAAAGGCT
TGGATCGGTGGACAGCAGTGGCTTCCACAGAAAACAGTCGGTGGTGCGGGTTGTCATATATACTTGACACATATCAGTGT
TATTAGTGTTTTCATTTG------------AAGGATACAAGTTAAAGGAAAATACGTGGATGAATCCGGGAACATATGAC
CTCACTTTCGAAAACACATTTCTAAATGCCAAAAAATTCTGAAAAAATGTTGCACGCATATATTTTCATGTTCTATGTGC
GCGCAGAAAGTTTCGTAAAAAAACTACTTTTTATTTGGCCCGTGCAAAAAAAAACAGAAA---ATGTGTCATTGAACTTT
ATTTAGAAGCACTGGAATTTGTCTTCTCTGCGGAGGCAAAATAAAAAGACATTTTTCCGCAAAATGTTGTGCTGCACACA
TATTTTTTTGTGAACATGTTCACGTGAAATTTCATTTTGA---TTTCTTTTACATTTTAAAACATGGTTAAA-TGCATTT
TTTAAAAGCGATTTCATATGTACCCGAGTTCAGGGCGTGCCTTCTCAGAAGTTAACAGTTCTGTTTTAAAGGCCGAAAGT
TTTTTTTTCACGGGGAGGAAAATTAGTAAGTTCATCAAAAGTCTGAATTGATGTAAATAGACGAACAATATCTTCTAAAT
CACTAAGCTTCCTAGGGGTAAAACTCCTAGGAAGCGATTGAGGCTACTGATTCATTTTGTCATTTCCATTTCGATCCCCT
C--------GCATGTCCTTACATAGGTGTATATATGTCATTGACTCGCTTTTCCCATCTTTTACCCTCGCCTCGCACGGT
CTCAAGCA--------CTCTAGATATACCAAATGCCACACACCTGATAGCATTCCCCACAATTGCCAGGGTGTAGATCGT
TGAACTCATGGAATCAAGAGTGTACATGAGTGATACAGAGGAAGGGGGAGAGTTAGCTTGAGGAAGAAGCTCTATAGGAG
GAGTATAAGAGTTTAGTGGATACAAATGATCTTGAATGTGCTGCATAAACACATCTAATAACTAT
>chr3A_1
TGCTTGTGATAAACAACAAA-----GATTGTACAAGTGCGCGCAGTGCATGAAGGTGGCACGGTAGTGCAGTCTCAAACC
GGAAAGCCTTCGTCAGAAAGCTTTGTCATCTTTCCCTCCCTCGATGGATTTCTTAATA---TGT-TTTTGGGTCTTCGCT
TATGGTGATGAACAATAATTAAGAGTAAATTATGTGGCCTCTCAGCAGTCATTTTGTCAGGGGAAGCACGGTGACAGCCG
ATCGTCGACGAGCAGTCAGGCATC-------AACTTGTAAGCAGCCTAGCGTAGTAACCGAGAGTGTTTGTTCTCTGTGT
GAGACGTTG-----GATCTCTATTGGTTGGACCCTCAAAAA---AATGAAGAAGAAAACTAAATTCGAAACCTGGCAAAG
TGGCAAATAAAAGGCGAATCTCACCGACCATCTCCCGTCCCGTTCAATCTAACAGTGCAGTGCAGCATATAACAAGATTA
CTAAGATCATCAAGCATGAGATATCCAAAGTTCAATCCATCGTCAAATTTATTTCCCATACACCATGATCAGATGGAGTG
CATGAACGATACACACCCTAGGGGCAGTTTGAAAC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TGGTCAGATAGTTTGTTAGCTTTCC
TTGTATGGATTTCTTGAGCTCTTGGAGCTGTCCTTCACATGTGTCGATGGTTATGGAAAACAATGTGCCATCTGAGCA--
--------A----------TGTATAGGAGAAAGCAAACACCCTTTTCTTCTCTTCCAGGTCAGCAATTAGCAATTATCTT
ACGTGATTTCTTTTCTGAAGATAAGGTTAAAGCCACCAACCACATTATACACACCCTTTACATTTAGGACAACTGTTTAT
GTGCATGTCTACTTGTGAGACATTCACGAGCCAATTTCTCGTGATGGATGGGTTTTCTTTGTTCCAAAGTTACTGAAAGA
CCACAAAAAGGATCACATGAGAGTGAGCTTGCACCGATCCGTTGACGCACCCTCCACTCCAC-TATATAAATCCCATCCC
GCCTGCACCGAATGGCGCGAAATCAATCGG--------GATGT-----TGAATCATCGGGAGATGTTAGATCGCGTCAAC
TCGGCGGCCAGGGTCGCCATACTGCTGGCTCTGCTCTGCTTTTGCTCTGCCACCTCTTCCTACTCTTTCCCCGACGACGC
GGCCT------GTGCCGGTGCGAGTGGCATGGCGATGCCGGGTCCGGGTAATCTCCTCACGGTCGACCAATCCGGCAAAG
GCGATTACAGGAAGATCCACGAGGCGATCGCCGCCGCCCCGGTGAACAGCTCCGCCCGCACTGTCATCCTCATCAAGCCC
GGAGTCTACAAGTAAGTTT----------------CCTTCTGAATTCTGATACGGGAGTACTAGTAGACAGTACGTGGTG
TGGTGCATGCCTGATCGCCTGTAATCTTTCGTTGCAGGGAGAAGATCGTCGTCCCCGTGGACAAGCCCAACATAACACTT
TTCGGCACCAGCGCCAACACGACCGTCATCACCTGGAACGAGCCCTGGCTCTCGACCGACACTTCCCCTACCGTGACCGT
TCGGGCCTCCGACTTCGTCGCCAGCCGCTTAACGTTCCGGGTAAGTCTGCCATCCATGGTTCGTGCTTGCACACAGAGAG
CGAGGTGCGCGTGTTGACAGTTTCTTGCTGATTTTCTCGGGGTTTTAGAACACGTTCGGGACCAGCAAGCAGGCCATCGC
GGTGAGAGTCGCCGGAGACAGGGCGGCGTTCTACGGGTGCAGCTTCTCGTCGTTCCAAGACACGCTCCTCGACGACAACG
GGCGCCATTACTACTGCGGGTGCTACATCGAAGGTGGCACCGACTTCATATGCGGGAACGGCCGGGCTCTCTTTGAAGTA
AGTACTACATGTTCACCGTTCTCACCAGCAAACCCGTGCGCATAGAT---A-----------------------------
-------------------------------------------------------------------GATCATACGTACT
TACTCCGTACGCACGAGAGAGGTTTGAATGGCGGTCATGTAATAGGATAGACATGTAGTGTTCCTATTGTGTTTGCCAGC
CGGTTGTGGCTTTGAGTTTTAGCTCTTTCGAGCTTATTGTTTATTTTCGCACCTCGATACTTGACGACTTTGTTACTGGA
TTATAATTTTAAAAATATGAGCCATATGCATCTTTCTGATGCAGGGTAAACCCCCTTTTCAAAAAAAAAAAAAAACGAAA
AGAAAAACGCACAAGAGGTTGCTTTGC--TGCCAAGATCAACTAACAATATATAGTTCGTGTGCAGAAATGCCACCTGCA
CTCCACCTCGCTCACGGGCGGCGCCTTCACAGCGCAGAAGCGGGCGTCCGAGTCGAACTACACGGGATACAGCTTCGTCC
GGTGCAAGCTAACCGGCGTCGGGGTCAGCACCTCCATCCTGGGGCGTCCATGGGAGCCCTACTCCCGCGTCGTGTTCGCT
CTCACCTACATGTCCGCAACGGTGAGCCCTCGAGGCTGGAATGACTGGAACCACACCGCCAACCAGAGGTAAACTTAGGG
CCTCTTTGATTCACAGGATTTTCAAAATGAAAGAATAGGAAAAGTGCAGGAATAGGGTGACATGTCCCATAGTATCCTAC
AGGATTTGAAAGAATGTTTGATAGCATTAGAAAAACAAAGGAATTCTATAAAGAGGTTTGAGTGGATGGAAATTTTCCTT
CAAAATGTAGTACAAATGGATCATATGGAAAAATTTCTAAGGATGCCAATCCTATGAATCAAACGAGTATCACAGGAAAA
ATTCCTAAGAGTTTAAATCCTTCAAAAATCCTATGCAATTCTTTTGAATCAAAGGAACCCTTAGTCTTGCTCCGCTGCCA
TTTTCCCGCCAAAGGAAGACCAATATATAACGCGCTTTGGCCTGGGTTTGCAACTTTGCATTGCATGCAGGACGGCGTTC
TACGGGCAGTACCAATGCTACGGCCAAGGGGCGAAAACTGATGGCAGGGTTAAGTGGGCTCGCAACCTCTCGCCAACCGA
AGCAGCCCCCTTCATGACCAAGGCCTGGATCGATGGACAGCAGTGGCTTCCGAAGCAGCCCGCTTCATGACCAAGC--CT
TGGATCGGTGGACAGCAGTGGCTTCGGTAGAAAACTGTCGGTGGTGTGGGTTGTCATATATACCTGACACATATCTGTGT
T------------ATTTG------------AAGGATACAAGTTAAAGGAAAATACATGGATGAATCCAGAAACATATGAA
CCCACTTAAAAAAACACATTTCTAAACA-CAAAAAATTCTAAAAAAAAGTTGCGCACGTACATTTTCATGTTCTATGTAC
GGTCAGAAAGTTTCGCGAAAAAACAACTTCTCGTTTGGCCTGTGCAAAAAACATACAAAAAGAGTGTGTCGTTGAACTTT
ATTTAGAAGCACTAAAATTTATCTTTTTTATAGAGGCAAAATAAAAAGATATTTTTCCGAAGAACGTTGTGCTGCACACA
TA---TTTTGTGAACATGCTCACGTGAAATTTTATTTTGAC-TTTTTTTTTACATTTTAAAACATGCTTAAAATGCATTT
TT--AAACCGGATTCATATGTATCCGAGTTCAGGGCGTGCCTTCTCAGAAGTTAACAGTTCTCTTTTAAAGGCCGAAAGT
TTTTT--TCACGGGGAGGAAAATTTGTAAGTTCATCAAAAGTCTGAACTGATGTAAAGAGACGAACAAAATCTTCTAAAT
CACTAAGCTCCCTAGGGGTAAAACTCCTAGGAAGCGATTGAGGCTACTGATTCGTTTTGTCATTTCGATTTAGATCCCCT
C--------ACATGTCCTTACCTAGGTGTATACATGTCATTGACTCGCTTTCCCCATCTTTTTCCCTTGCCTCGCACTGT
CTCGGCCA--------CTCTAGATATACCAAATGCTACACACCTGATAGCATTCCCCACAATTGCCAGGGTGTGGATCTT
TGAACTCATGGAATCAACAATGTACATGAGTGACACAGAGGAAGGGGGAGAGTTAGCTTGAGGAAGAAGCTCTATGTGAG
GAGTATAAGAGTTTAGTGGATACAAATGATCTTGAATGCGCTGCACAAACACAGCTAATAACTA-
>chr3D_33
--------------------------------CAAGTGCGCGCAGTGCATGAAGGTGGCACGGTAGTGCAGTCTCAAACC
GGAAAGCCTTCGTCAGAAAGCTT-GTCATCTTTCCCTCCCTTGATGGATTTCTTAATA---TGTGTTTTGGGTCTTCGCT
GATGGTG--------------------------------------CAGCCATTTTGTGAGGGGAAGCACGGTGACAGCCG
GTCGTCGACGAGCAGTCAGGCATC-------AACGTGTAAGCAGCCTAGTGTAGTAACTGAGAGTTTTTGTTCTTTGTGT
GAGCCGTTG-----GATCTCTATTGGTTGGACCACCAAAAA---CATGAAGAAGAAAACCAAATTCCAGACC--------
TGGCAAATAAAAGGTGAATCTCACCGACCATCTCCCGTTCCGTTCAATCTAACAGTGCATCGTAC-----AACAAGATTG
CAAAGATGATCAAGCATGAGATATCAAAAGTTCAATTCATCGTCAAATTTATTACCCATACACCATGATCAGATGAAGTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTCAGATAGTTTGTTAGCTTTCG
TTGTATGGATTTCTTCAGCTCTTGGAGCTGTCTTTCACATGTGTCGATGGTTATAGAAAACAATGTGCCATCTAAGCAAA
ACTAGTTCA----------TGTATAGGAGAAAGCAAACACCCTTTTCTTCTCTTCCAGGTCAGCAATTAGCAATTATCTT
ACGTGATTTCTTTTCTGAAGATAAGGTTAAAGCCACCAT----ATTATGCACACCCTTTACATTTTGGACAACAGTTTAT
GTGCATGTCTACTTGTGAGACATTCACGAGCCAGTTTCTCGTGATGGAGGGATTTTCTTTGTTCCAAAGTTACTAAAAGA
CTACAAAAAGGATCACATGAGAGTGAGCTTGCACCGACCCGCTGACGCACCCTCCACTCCACATATATAAAGCCCATCCC
GCCTGCACCGAATGGCACGAACGCGATCAGCCTGCCTTGAGGTTGAAATGAATCATCGGGAGATGTTACATCGCGTCAAC
TCGGCGGCCAGGGTCGCCATACTGCTGCCTCTGCTCTGCTTTTGCTCTGCCACCTCTTCCTACTCTTTCCCCGACGACGC
GGCCT------GTGCC------AGTGGCATGGCGATGGCGGGTCCGGGTAATCTCCTCACGGTCGACCAATCCGGCAAAG
GCGATTACAGGAAGATCCACGAGGCGATCGCCGCCGCCCCCGCGAACAGCTCCGCCCGCACTGTCATCCTGATCAAGCCC
GGAGTCTACAGGCAAGTAACCGCAAATGACCATTACCTTCTGAATTCTGAATTCTGA--------------TACGTGGTG
TGGTGCATGCCTGATCGCCTGGAATCTTTCGTTGCAGGGAGAAGATCGTCGTCCCCGTGGACAAGCCCAACATAACACTT
TTCGGCACGAGCGCCAACACGACCGTCATCACCTGGAACGAGCAGTGGGTGTCGAGCGACACTTCCCCTACCGTGTCCGT
TCTGGCCTCCGACTTCGTTGCCAGCCGCTTAACGTTCCGGGTAAGTTTGCCATCCATAGTTCGTGATTGCAAAGAGCGAG
CGAGGCGTGCGTGTTGACAGTTTCTTGCTAATTTTCTCGGGGTTTTAGAACACGTTGGGGACCAGCGCTCCGGCCATCGC
GGTGAGAGTCATGGGAGACAGGGCGGCGTTCTACGGCTGCAGCTTCTCGTCGTTCCAAGACACGCTCCTCGACGACAACG
GGCGCCATTACTACTGCGGGTGCTACATCGAAGGTGGCACCGATTTCATCTGCGGGAACGGCCGGGCTCTCTTTGAAGTA
AGTTTTACATGTTCACCGTTCTCACCAGCAAACCCGTGCGCATTGATAGATACCCCCTCCGTTTCAAAATAGATGACCCA
ACTTTGTATTAACTTTATACTAAAGTTAGTATAAAGTTGGGTCATCTATTTTGAAACGGAGGGAGTGGATCATACGTAGT
TACTCCGTACGTACG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------AGAGGTTGCTTTGC--TGCCAAGATCAGCTAACAATATATAGTTCGTGTGCAGAAATGTCACCTGCA
CTCCACCTCGCCCAACGGCGGCGCCTTCACGGCGCAGAAGCGGGCGTCCGAGTCGAACCACACGGGATACAGCTTCGTCG
GGTGCAAGCTGACCGGCGTCGGGGTCAGCACCTCCATCCTGGGGCGTCCATGGGAGCCCTACTCCCGCGTCGTGTTCGCT
CTCACCTACATGTCCGCAGCGGTGAGCCCTCGAGGATGGGATGACTGGAACCGCACCGCCAACCAGAGGTAAACTTAG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TCTTGCTCCGCTGCCA
TTTTCCCGCCAAAGGAAGACCAATATATGACGCGCTTTGGCCTGGGTTGGCAACTC-----TGCATGCAGGACGGCGTTC
TACGGGCAGTACCAATGCTACGGCCAAGGGGCGAAAACTGATGGCAGGGTTAAGTGGGCTCGCAACCTCTCACCAACCGA
AGCAGCCCCCTTCATGACGAAGGCCTGGATCGATGGACAGCAGTGGCTTCCGAAGCAGCCCCCTTCATGACCAAGC--CT
TGGATCGGTGGACAGCAGTGGCTTCGGTAGAAAACAGTCGGTGGTGTGGGTTATCATATATACTTGACACATATCAGTGT
T------------ATTATTGTTTTCATTTCAAGGATACAAGTTAACGGAAAATACGTGGATGAATCCACGAACATATGAA
CCCACTTAAAAAAACACATTTCTAAATGCTAAAAAGTTCTGAAAAACAGTTGCGCTCGTACATTTTCATGCTCTATGTGC
GCCAC-AAAGTTTCGCGAAAAAACAACTTCTCATTTGGCCTGTGCAAAAAACATACAAAAAGTATGTGTCGTTGAACTTT
ATTTAGAAGCACTAAAATTTGTCTTATTTACGGAGGCAAAACAAAAAGATATTTT-CCACAGAATGTTGTGCCGCACACA
TA---TTTTGTGAACATGTTCACGTGAAATTTCATTTTGACTTTTTTTTTTACATTTTAAAACATGCTTAAAATGCATTT
TTTTAAAGCGGTTTCATATGTATCCGAGTTCAGGGCGTGCCTTCTCAGAAGTTAACAGTTCTCTTTTAAAGGCCGAAAGT
TTTTT--TCACGGGGAGGAAAATTTGTAAGTTCATCAAAAGTCTGAATTGATGTAAAGGGACGAATAAAATCTTCTAAAT
CACTAAACTCCCTAGGGGTAAAACTCCTAGGAAGCGATTGAGGCTACTCATTCGTTTTGTCATTTCGATTTCGATCCCCT
CACATAGTCACATGTCCTTACCTAGGTGTATA-ATGTCATTGACTCGCTTTCCCCATCTTTTCCCCTCGCCTCGCACGGT
CTCGGCCTGACGGCCTCTCTAGATATACCAAATGCTACACACCTGATAGCATTCCCCGCAATTGCCAGGGTGTGGATCTT
TGAACTCATGTAATCAAGAGTGCACATGAGTGATACAGAGGAAGGGGGAGAGTTAGCTTGAGGAAGAGGCTCTATGGGAG
GAGTATAAGAGTTCAGTGGATACAAATGATCTTGAATGCGCTGCACAAACACAACTATTAACTAT
>SNPs
--------------------SSSSS-------------------------------------------------------
-----S----------------------------------------------------SSS-------------------
--------S-----------------------------------------------------------------------
------------------S----SSSSSSSS--------------------------------S----------------
---------SSSSS--------------S------------SSS---------------------S-S------------
----------------------S-S-------------------------------------------------------
-------------S-------------------------------------------------------S----------
----------S-----------------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S-S--------------------------------------------------------------------------
---------SSSSSSSSSS------------------------------------------------S------------
--------------------------S-----S-----------------------------------------------
------S-------------------------S-----------------------------------------------
---------------------------------------------S---------------------SS-SSSSSSSSS-
SS-SSSSS-----------------------S----------------------------S-------S-----------
------------------------------------------------------------------------------S-
-----SSSSSS---------------------------------------------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------S----------------S------S--S--------------------------
---------------------------------------------------------------------------S----
----S----S---S---------------------------------------------------------------S--
--S------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
-----------------S-----------------------------SSS------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------SSSSSS--------------------S------------------------------
------------------------S----------------------------S---------S---------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------S-------------------------------S---
--------------------------------S---S-------------------------------------SSSS--
-------------------------SSS------------------S---------------------------------
-SSSSSSSSSSSS------------------------------------------------------S-----------S
-S-----SSS-------------------------------------S-----S-S-S--S-------------------
--S------------SS-------S----S-S--------S----------S-SSSS-------------S---------
-------------SS----------S-S-S-------------------S-----------S------------------
--SSS-----------------------------------------S-------------------S-------------
---S------S-----------S---------------------------------------S-----------------
-----SS-----------------S--------------------------------S----------S-----------
---------S-------------------------------------------S------------S-------------
---------S-----------S----------S------------------S----------S-----------------
---SSS-----------------------------S-------------------------------------S----S-
---------------------------------------------------------------------------S----
--------------------------------------S------S-------S-----------
>forward_1368
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------TATAAAGCCATC
CGCCTGCA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_2774
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------TGAACCACACCGGATACAGC-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>forward_2288
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------CAAACCCGTGCGCATAGATG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_4292
--------------------------------------------------------------------------------
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---------------------------------------------------TCCCATCTTTTACCCTCGCC---------
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-----------------------------------------------------------------
