>input_sequence_51707
--------------------------------------------------------------------------------
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----------------------------------------------------------------ATGGAGAGCGTGGATG
AAAAT------GGAGGAAGCCGCCTTGTGGTGACCGAGCTGGGCTACATCAAGGAGCTGGTGAGGCAGCTGGACGTGAAC
CTGGGAGGCTGCCCCGACCACTGCAAGCGCCTGGCCGCCCAGATCTTCGCTGTGACCGAGAGGTCCATCGGCATGATCAG
GTCCGGGCACTTCGACAGCCGGAAGCGCTCCGCCGC------CGGCCTCGACTCGCCGCCGTTCTCCGCGACGCCCAGCC
CCCTGAGCGACGTTTCGGGCATGCCTTTCCATACCAACAACAAGAAGAGGTGCATACTTTAT----GAAACTATTCGATC
TTGTCACGATTAATTGATGAATAGTCAGTCGTATTTTGGATCTTTTTAGTGTAGATTTTTAAGTGCCTTCTTTCTTCTTG
GATTTGCAGGAAAACAATGGAGAAACGGAAGCATCAGGTCAGGGTGAGCTCGGAGGGAGGAGGAGCAGAGACCCCAGTCG
ACGACGGCCACAGCTGGAGGAAGTACGGCCAGAAGGACATTCTTGGAGCCAAGCACCCAAGGTTGGTAG--TAGTAATTT
TCTTTTGGTAC------------------------ATCCGCACATGTTTAAATTACACGAGTGGCAAGTGGCTCCACAAT
CATCCGCTTTCGCTTTCTGTGAGGTCACGGGGATTTTTACTTTTGGATTTGGGCACTGGTTCTTCTTCGAGGTGTTCTTT
TCAGGTGGTGAATCTTGCAGCCTTTCCACTGTTGCCAATTATTCGGCATCCACTAGTCAGATAGTAGTACACCTGTT---
-----GCATCCGATTGAACCGCTCCAGAGGAAT-----------------------------------------------
--------------------------------------------------------------------------------
---------TGT---------GTTCGCCGTCCCTGACCTGAACTGTG--CAACACTGCAGGGGGTACTACCGCTGCACGC
ACCGCAAGTCCCAGGGATGCGCGGCGACCAAGCAGGTGCAGCGCGCCGACGAGGACCCGGCGCTCTTCGACGTGATCTAC
CACGGCGAGCACACCTGCGTTCATAAGACGGTGGCGGCCGCGGCGGC---CATGGTGCAGCCGGCGGAGGAGAACCCGGA
CGCGCGTAGGCATCTGCAGAACCTGAGCACGAGCCTGACGGTGAACACCGAGGGGCTC------ACGGCG------GGTC
ATCAGGGCTGCAGCACCACCACGTCCTTCTGCTTCTCCTCGCAGGCGGCGGGCGTGCTGACGATGCCGCAAGAGCACTAC
CCGTTCTCCATGCCGTCGACGCCGGAGAACTGCTTTGGGCAAGGCGCGTCGCTGTCGACGTCCCTTGAGCCCTCGCCGGT
GACCTCGGACTCGAACCGCTTCTCCATGAGCCCGTTCCAGGCGGAGTGGAGGGCGCGGTCTGAGTACGACGAGGTGGTGT
CCGCGCTCGTAGCAGCGGGGACGATGCCGGCGCTCACCATGGAGATGGAGGAGGAGACCGCCTTCTCGCTGGACGAGTTT
GAGTTTGACGTTTCTTGCTTCCTTGCATGA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>chr5B_1_TraesCS5B01G183700
CATCGTGTAGACGGTAGCCACGGAGTAAGCACCACTAGAAGTGTGCTTCCAAACAATATCATCTTAAGCATGGGCGTCAA
AAGTGGAAGTCGCAAAGGATGGTCCAAAGAGCCACAAACTGGCGGGTGTGCTCTA-AGGAGGAGTTAACGGTAATCTTTA
TTTTTGGAACCCAAGCGTCCTCATTGAGAGCCTCATTCACCTTCCAATTTTTTTTATTTTTTTTCTCGTGGATGCGTAGA
AGATGAGAGGTGCGATCTCCTTTGGTTT-CGGTTATTGATCCAAGGTGCCTACTAGAATGGAGTTTTAGCTTCACCTTCA
ATGGTGATGTTGGTGCTGGCATAGAAAAGGTCAAAGTCATGTTCATCACATGGGTTGTCCATGCAAACCCAAAATTTTGA
TGTTTCTTTCCATTCAAACTATGGTCATCAAAGTCTCAAAGAATGCACAAACTTTGCAGTGTTGAGCACCTGGATCCTCA
TGT--TCATAAGGCCGACACACCATATCTAAATTTACATTGCATTTCATCCCGATAGTCTTGTCCGATTCAGACAAAAAA
AAGCTT-GCTCAAGCTTGTTGGTGTTGCTAACCTTTTCATACTCCAGTTGTTTATATCACTTATGA-----CTCGTAAGT
GATATAAACAACTGGATTATAAAAAGTGTCATAAGCTGAAGGTTCCTGCATGTAAGATTGTATGCTAACGGTAGAGATCC
GTTAGCTTCAAGTTTGCAACCCGACCCGGCAAGGGATTGGCCAATCAAATCACAGTCTCTACTAAGCCCGCCGGTCAAAA
ATACTGTTC-AGTTTGTTCACTTTAACCCAT-CGCGGTTTGCTGGCCATTATATAAGACCGCCTCCTTTCGCTTCACTCA
CCATCTCATCTCAACTCTCCGATCACATCTCGATTTTTCCTCTTCTACACAG------ACACACACACACACTCGCTGCG
CAATTCGTTTCTGGGACAGAGACTTCC------GCAGCGGCAAGAAAATTAGCAGCGCAGAGCGATGGAGAGCGTGGATG
AAAAT------GGAGGAAGCCGCCTTGTGGTGACCGAGCTGGGCTACATCAAGGAGCTGGTGAGGCAGCTGGACGTGAAC
CTGGGAGGCTGCCCCGACCACTGCAAGCGCCTGGCCGCCCAGATCTTCGCTGTGACCGAGAGGTCCATCGGCATGATCAG
GTCCGGGCACTTCGACAGCCGGAAGCGCTCCGCCGC------CGGCCTCGACTCGCCGCCGTTCTCCGCGACGCCCAGCC
CCCTGAGCGACGTTTCGGGCATGCCTTTCCATACCAACAACAAGAAGAGGTGCATACTTTAT----GAAACTATTCGATC
TTGTCACGATTAATTGATGAATAGTCAGTCGTATTTTGGATCTTTTTAGTGTAGATTTTTAAGTGCCTTCTTTCTTCTTG
GATTTGCAGGAAAACAATGGAGAAACGGAAGCATCAGGTCAGGGTGAGCTCGGAGGGAGGAGGAGCAGAGACCCCAGTCG
ACGACGGCCACAGCTGGAGGAAGTACGGCCAGAAGGACATTCTTGGAGCCAAGCACCCAAGGTTGGTAG--TAGTAATTT
TCTTTTGGTAC------------------------ATCCGCACATGTTTAAATTACACGAGTGGCAAGTGGCTCCACAAT
CATCCGCTTTCGCTTTCTGTGAGGTCACGGGGATTTTTACTTTTGGATTTGGGCACTGGTTCTTCTTCGAGGTGTTCTTT
TCAGGTGGTGAATCTTGCAGCCTTTCCACTGTTGCCAATTATTCGGCATCCACTAGTCAGATAGTAGTACACCTGTT---
-----GCATCCGATTGAACCGCTCCAGAGGAAT-----------------------------------------------
--------------------------------------------------------------------------------
---------TGT---------GTTCGCCGTCCCTGACCTGAACTGTG--CAACACTGCAGGGGGTACTACCGCTGCACGC
ACCGCAAGTCCCAGGGATGCGCGGCGACCAAGCAGGTGCAGCGCGCCGACGAGGACCCGGCGCTCTTCGACGTGATCTAC
CACGGCGAGCACACCTGCGTTCATAAGACGGTGGCGGCCGCGGCGGC---CATGGTGCAGCCGGCGGAGGAGAACCCGGA
CGCGCGTAGGCATCTGCAGAACCTGAGCACGAGCCTGACGGTGAACACCGAGGGGCTC------ACGGCG------GGTC
ATCAGGGCTGCAGCACCACCACGTCCTTCTGCTTCTCCTCGCAGGCGGCGGGCGTGCTGACGATGCCGCAAGAGCACTAC
CCGTTCTCCATGCCGTCGACGCCGGAGAACTGCTTTGGGCAAGGCGCGTCGCTGTCGACGTCCCTTGAGCCCTCGCCGGT
GACCTCGGACTCGAACCGCTTCTCCATGAGCCCGTTCCAGGCGGAGTGGAGGGCGCGGTCTGAGTACGACGAGGTGGTGT
CCGCGCTCGTAGCAGCGGGGACGATGCCGGCGCTCACCATGGAGATGGAGGAGGAGACCGCCTTCTCGCTGGACGAGTTT
GAGTTTGACGTTTCTTGCTTCCTTGCATGAGATGATGGT---------------------------AAAAAAAAACAGGA
AAAGAAACGGGACT-GTAGGTATTAGAGGTATCACCCGCTCAGCTCTGATTTT-GGTTAGCGACAGAGGAAGAATAACAA
CAAATAAGTTCTTCATGGGTCAGTGTGGGTGTTTGTGTAAGCTTTAGGAGATGAGATTAGCTCCTTTTTTTTCGCAAAAA
AAAAAGAGATTAGCTCCTTTTCTTCATATTCTTTTAATTTATTTTTATTCCAGAGATTTTTCTTCTAAATTCAGCTACTA
GTAGTTCCCAAGAAGGGTGGCAAAAACAAATTGTAAGCAATGCGTATTCCTCCACCTGATTTTTTTTTGCCACCCAATCC
TAATGTGCGTGTTTTGCTCCGCCACAAAAAGTTGCTTAAACTTTGGACGAAAATCGTAAATGAACACCATGCTTAAAAAA
AGCCTTCCAAAAATTGGTGAGAGTGCACGTTTTTTTTGTTGAACCATGCAGGAGAATTGCATATATTTTGATAAGAGAAA
AGAGATTACACACCGAAGATGACACAACCTATACATCATCAAAAATGGTACGACGAAAACAACCCGACGATCCTTACATC
GCCGAATATGGCACGACCCCAAGTCCCCAAGTACACCATGACCCAAGCAACAATTTGCAACATGAGGACAGAACCAACTC
CAAACCAAACTACAATGAGAGCACTCAAGCGACCTAGGCAGAGAGCAAATCGTTGAACTACGTCCAAGTGAAGGGCCTCG
TCGACATCAGGAGCTTGCAACTAAAACCACAAACAACCGACCACAACCACAACAAAGGGACACAAATATCACAGGGGCAC
CACCCAAGGACCAAGAGCACGACAAGCCCGGCGAAGCCACCACTGCACGAGTAGGGGCAACAATAGGATCCATAGCATAA
AGAGCTTCGAGAAGGAGGACCACTGACGTACGAGGGTAGGATGGCACTCCAACTGGCAACACCAAAGCCAACCAAAGAAG
GAAACAACGATATAGGGGA
>chr5D_5
----GTGTACACGGTAGCCGTGAAGTAAACACCACTAGAAGTGTTCTTCCAAACAATATCATCTTCGCCATGGGCATCTA
G-GTGGAAGTTGCAAAGGATGGTCCAAAGGGCTACAAACTGGCGGATGTGCTCTGTAAGAAGAGTTGATGTTGGTCTTAA
TTTTGGAACCCGGA-CGTCCTCATTGAGAGCCTCCTTCACCTTCCATTTTTCTTTCTCA---------TGGATGCCTCGA
AGATGAGAGGGGCAATAACCTTTGGTTTCCGGTTATTGATCCAAGGTGCCTCCTAGAACGGAGTTTTAGCTCCATCGCTA
ATTGTGATGGTGGTGTAGGCATAGAAGAGGTCAAGGTCGTGTTCATCACATAGATTGCCCATGCAAACCTAAAGTTTTGA
TTGCTCTTTGCATTCAAACAATGGCATCT-AAGTCTCAAAGAATGCATGAACTTTGCAGTGTTGAGCACCCCGAGACCTC
CATGCTCATAAGGCCGACACACCATATCTCAATTTACATTGCATTTCATCATGGTGGTCTTGTCCGATTCAGACAAAAAA
AAGGCCCGCTCAAGCTTGTTGGTGTTGCTAACCATTTCATACTCCAGTTGTTTATATCACTTATGAGTTGACTCATAAGT
GATATGAATAACTGGAGTATAAAAAGT-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>chr5D_650
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TAAAAAGTGTCATAAGCTGAAGGTTCCTGCATGTAAGATCGTTTGCTAACACTAGAGATCC
GTTAGCTGCAAGTTTGGAACCCGACCCGGCATGGGATTGGCCAATCAAATGACAGTCTCTACTAAGCCCACCGGTCAAAA
ATACTGTTC-AGTTTGTTCACCTTAACCCAGACGCGGTTTGGTGCCCATTATATAAGACCGCCTCCTTTCGTTTCACTCA
CCATCTCCCCTCAACTCTCCGATCACATCTCGATTTCTCCTCTTCCACACACACACACACACACACACACACTCGCTGCG
GAATTCGTTTTTGGGACAGGGAGCTCTGCAGCGGCAGCGGCAAGAAAATTAGCAGCGCAGAGCGATGGAGAGCGTGGATG
AAAAT------GGAGGAAGCCGCCTTGTGGTGACCGAGCTGGGCTACATCAAGGAGCTGGTGAGGCAGCTGGACGTCAAC
CTGGGAGGTTGCCCCGACCACTGCAAGCGCCTGGCCGCCCAGATCTTCGCCCTGACCGAGAGATCCATCGGCATGATCAG
GTCCGGGCACTACGACTGCCGGAAGCGCTCCGCCGC------CGGCCTCGACTCGCCGCCGTTCTCCGCGACGCCCAGCC
CCCTGAGCGACGTTTCCGGCATGCCTTTCCAT---AACAACAAGAAGAGGTGCATACTTTAT----GAAACTATTCGATC
TTGTCACGACTAATTGATGAATAATCAGTCGTATTTTGTATCTTTTTAGTGTAGATTTTTAAGTGCCTTCTTTGTTCTTG
GATTTGCAGGAAGACAATGGAGAAACGGAAGCATCAGGTCAGGGTGAGCTCGGAGGGAGGAGGAGCAGAGACCCCAGTCG
ATGACGGCCACAGCTGGAGGAAGTACGGCCAGAAGGACATCCTTGGAGCCAAGCACCCAAGGTTGGTACTCTAGTAATTT
TCTGTTGGTAC------------------------ATCCGCACATGTTTAAATTACACGAGTGGCAAGTGGCACCACAAT
CATCCGCTTTCGCTTTCTGTGAGGTCACGGGGATTTTTGCTTTTGGATTCGGGCACTGGTTCTTCTTCGAGGTGTTCTTT
TCAGTTGGTGAATATTGCAGCCTTTCCACTGTTGCCAATTGTTCGGCATCCACTAGTGG------AGTACACCTGTT---
-----GCATCCGATGAA--CGCTCCAGAGGAAT-----------------------------------------------
--------------------------------------------------------------------------------
---------TGTTCTGATTTTGTTTGCCGTCCCTGACCTGAGCTTTG--CAACGATGCAGGGGATACTACCGCTGCACGC
ACCGCAAATCCCAGGGATGCGCGGCGACGAAGCAGGTGCAGCGCGCCGACGAGGACCCGGCGCTCTTCGACGTGATCTAC
CACGGCGAGCACACCTGCGTCCATAAGACGGTGGCGACCGCGGCGGCGGCCATGGCGCAGCCGGCGGAGGAGAACCCGGA
CGCGCGTAGGCATCTGCAGAACCTGAGCACGAGCCTGACGGTGAACACCGAGGGACTCACGGCGACGGCG------GGTC
ATCAGGGCTGCGGCACCACCACGTCCTTCTGCTTCTCCTCGCAGGCGGCGGGCGTGCTGACGACGCCGCAAGAGCACTAC
CCGTTCTCCATGCCGTCGACGCCGGAGAACTGCTTTGGGCAGCGCGCATCGCTGTCGACGTCCCTTGAACCCTCGCCGGT
GACCTCGGATTCGAACCGCTTCTCCATGAACCCGTTCCAGGCGGAGTGGAGGGCGCAGTCTGAGTACGACGAGGTGGTAT
CCGCGCTCGTCGCTGCGGGGACGATGCCGGCGCTCGCCATGGAGATGGAGGAGGAGACCGCCTTCTCGCTGGACGAGTTT
GAGTTTGACGTTTCTAGCTTCCTTGCCTGAGATGATGGTC------------AAAAGAGAAAACCAAAAGAAAAGCAGGA
AAAAAAACGGGACT-GTACAATTTAGATGTATCACCCGCCGAGCTCTGATTTTTGGTCAGCGACAGAGGAAGAATAACAA
CAAACAAGTTCTTCATGGGTCAGTGCGGGTGTTTGTGTAAGCTTTAGGAGATGAT-------------------------
-----GAGATTAGTTCCTTTT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>chr5A_657
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TGTCTTAAGCTGAAGGT-CCTGCATGTAAGATCGTTTTAAAACAGTAGAGATCC
GTTAGCTGAAACTTTGCAACCCGACCCGGCATGGGATGGGCCAATCAAATTACAGTCTCTACTAAGCCCACCGGTCAAAA
ATACTGTTCCAGTTTGTTCACCTTAACCCAGACGCGGTTTGCTGCCCATTATATAAGACCGCCTCCTTTCGCTTCACTCA
CCATCATTTCTCAACTCTCCGATCACATCTCGATCTTTCCTCT-----------ACACAGACACACACACACTCGCTGCG
CAATTTGTTTCTGTGACAGGGAGCTCTGCAGCGGCAAA------AAATTTAGCAGCGCAGAGCGATGGAGAGCGTGGATG
AAAAT------GGAGGAAGCCGCCTTGTGGTGACCGAGCTGGGCTACATCAAGGAGCTGGTGAGGCAGCTGGACGTCAAC
CTGGGAGGCTGCCCCGACCACTGCAAGCGCCTGGCCGCCCAGATCTTCGCCGTGACCGAGAGGTCCATCGGCATGATCAG
GTCCGGCCACTTCGACTGCCGGAAGCGCTCCGCCGC------CGGCCTCGACTCGCCGCCGTTCTCCGCGACGCCCAGCC
CCCTGAGCGACGTCTCCGGCGTGCCTTTCCATGCCAACAACAAGAAGAGGTGCATACTTTATTTATGAAACTATTCGAGC
TTGGCACGATTAATTAATGGATC--------------------TTTTGGTATAGATTTCTAAGGC-TTGCTTTGTTCTTG
GATTTGCAGGAAGACAATGGAGAAACGGAAACATCAGGTCAGGGTGAGCTCGGAGGGAGCAGGAGCGGAGACCCCAGTCG
ACGACGGCCACAGCTGGAGGAAGTACGGCCAGAAGGACATTCTTGGAGCCAAGCACCCAAGGTTGGTACTCTAGTAATTT
TCTGTTGGTAC------------------------ATCCGCACATGTTTAAATTACACGAGTGGCAAGTGGCACCACAAT
CATCCGCTTTCGCTTTCTGTGAGGTCACGGGGATTTTTGCTTTTGGATTTGGGCACTGGTTCTTCTTCGAGGTGTTCTTT
TCAGTTGGTGAATGTTGCAGCCTTTCCACTGTTGCCAATTGTTCGGCATCCACTAGTCAGATAGTAGTACACCTGTT---
-----GCATCCCACTGAGCCGTTCCAGAGGAAT-----------------------------------------------
--------------------------------------------------------------------------------
---------TGTTCTGATTTTGTTTGCTGTCCCTGACCTGAGCTTTG--CAACGATGCAGGGGGTACTACCGCTGCACGC
ACCGCAAATCCCAGGGGTGCGCGGCGACCAAGCAGGTGCAGCGCGCCGACGAGGACCCGGCGCTCTTCGACGTGATCTAC
CACGGCGAGCACACCTGCGTTCACAAGACGGTGGCCGCC---GCGGCGGCCATGGTGCAGCCGGCGGAGGAGAACCCGGA
CGCTCGTAGGCATCTGCAGAACCTGAGCACGAGCCTGACAGTGAACACCGAGGGGCTC------ACGGCGACGACGGGTC
ATCAGGGCTGCGGCACCACCACGTCCTTCTGCTTCTCCTCGCAGGCGGTGAGCGCGCTGACGACGCCGCAAGAGCACTAC
CCGTTCTCCATGCCGTCGACGCCGGAGAACTGCTTTGGACAGGGCGCGTCGCTGTCGACGTCCCTTGAACCCTCGCCGGT
AACCTCGGACTCGAACCGCTTCTCCATGAACCCGTTCCAGGCGGAGTGGAGGGCGCAGTCTGAGTACGACGAGGTGGTGT
CCGCGCTCGTGGCCGCGGGGACGATGCCGGCGCTCGCCATGGAGATGGAGGAGAA---CGCCTTCTCGATGGACGGGTTT
GAGTTCGACGTTTCTTGCTTCTTTGCATCAGACGATTGATGATGGTAAAAGAAAAGGAGAAAACTAAAAGAAAAGCAGGA
AAAAAAAGGGGGACCGTAGACATTAGAGATATCGCCCGCCGAGCTCTGATTTTTGGTCAGCGGCAGAGGAAGAATAACAA
CAAACAAGTTCTTCATGGGTTAGTGTGGGTGTATGTGTAAGCTTTAGGAGATGAGATTAGTTCCTTTT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>chr5B_995
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------AGAGAGATGGAGGCCGTGCATG
AGGGCAATGGAGGAGGGAGCGGCCTGGTGGTGACGGAGCTGAGCCACATCAAGGAGCTGGTGAAGCAGCTGGACGTGCAC
CTGGGGGGCTCGCCCGACCTCTGCAAGCTCCTCGCCCAGCAGATCTTCGCCGTCACCGAGAGGTCCATCGGCATGATCAA
GTCCGGCCACTTCAACGGCCCCAAGCGCTCGGCCGCCGGCGCCGGCCTCGACTCGCCGCCGCTGTCCGCCACGCCCAGCC
CCGTCAGCGGCGTCTCCAACACGCCGTTCAAG---CCCAACAAGAAGAGGTGAGCCAAAACCCCTTGCAGTTGCAGAGAA
ATTGTTTTT------------------------TTTTTAATCTTTTTTTGCTGGATTGTTGAGTGATTGGTTTCTTCTTG
GATTCGCAGGAAGACGTCAGAGAAAGGGAGGCATCAAATCAGGGTGAGCTCGGCGGCGGGAGGAGCGGACGCCCCGGCCG
ACGACGGCCACAGCTGGAGGAAGTACGGCCAGAAGGACATCCTGGGAGCCCAGCACCCAAGGTTGGTCTCGGCGCATTTC
AGCCAAAGTTTCATCTTTCATTTTAAATAGTACTAATCCGCACATGCTTTCCG------------AAGTGGCAACGAAAT
CATTCGCTTTTCCTTGC-GTGAGATGATGGAGATCTCT-GTTTTGGATTTGGAA--------------------------
--------------------------CACTGTTCCCGAATTCATGGCGTCCACATGTCAGATAGGAATAGGGCAGCGAGT
GCACAGCGTCCGGTTGGATATGTTCCGAAAGGAGCTGGTGTTATTGGACAGGT---GATGATGGCGTGATGCCGCTTTGC
GCCAGTAGTAATTTTGTTCTGGCTTCACAATCACAAACTTTTCTGAAAAAAGGAAAAAAGTTCAGGGTTCAGAACTGGAC
ATGCCGCCATGGT-TTTTCTTTTTTGCCGTGCCTGACCTGGATCATGCACAACATTGCAGGGCATACTACCGTTGCACGT
ACCAGAAGACTCAGGGATGCGCCGCGACGAAGCAGGTGCAGCGCGCCGACGAGGACCCGGCGCTCTTCGACGTGATCTAC
CACGGCGAGCACACCTGCGTCCATAAGACGGCGGCGGCGGCGGG------CATGGTGCAGCCGGCCGGGCAGAACCCGGA
CGCGCAAAGCCTTCTGCAGAGCCTGAGCTCGAGCCTGACGGTGAAGACCGAGGGGCTC------ACGGCGGCGGGAACG-
--CAGGGCTGGAGCACCACCACGCCCTTCAGTTTCTCCTCGCCGGCGGTGAGCGGCATGACGCCGGCGGA---GCACCAC
CCGTTCTCCACGCCGTCGACGCCGGAGAACTGCTT---------CGTGTCGATGCCCACGTCGCTCGAACCCTCGCCGGC
GACCTCAGGCTCGAACCACATGTGCATGACCCCGTTCCA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------
>chr5D_1022
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------GGAGGGAGCGGCCTGGTGGTGACGGAGCTGAGCCACATCAAGGAGCTGGTGAAGCAGCTGGACGTGCAC
CTGGGGGGCTCGCCCGACCTCTGCAAGCTCCTCGCCCAGCAGATCTTCGCCGTCACCGAGAGGTCCATCGGCATGATCAG
GTCCGGCCACTTCAACGGCCCCAAGCGCCCGGCCGCCGGCGCCGGCCTCGACTCGCCGCCGCTGTCCCCCACGCCCAGCC
CCCTCAGCGGCGTCTCCAACACGCCGTTCAAG---CCCAACAAGAAGAGGTGACCCAAAACCCCTCGCAGTTGCAGAGAA
ACTGTTTTC------------------------TTTTAATC--TTTTTTGCTGGATTGTTGAGTGATTTC-TTGTTCTTG
GATTCGCAGGAAGACGTCGGAGAAAGGGGGGCGTCAGATCAGGGTGAGCTCGGCGGCGGGAGGGGCGGACGCCCCCGCCG
ACGACGGCCGCAGCTGGAGGAAGTACGGCCAGAAGGACATCCTCGGAGCCCAGCACCCAAGGTTGGTCTCGGCGCATTTC
GGCCAAAGTT-CATCCTTCGTTTCAAATAGTAATT----GCACATGCTTTCCG------------AAGTGGCAACGAAAT
CATTCGCTTTTCCTTCC-GTGAGATGATGGAGATCTCT-CTTTTGGATTTGGGA--------------------------
--------------------------CACTGTTCCCGAATTCATGGCGTCCACATGTCAGATAGGAATAGGGCAGAGAGT
GCACAGCGTCCGATTGGATATGTTCCGAAAGGAGCTGCTGTTATTGGATAGGTGATGATGATGGCGTGATGCTGCTTTGT
GCCAGTAGTAATTTTGTTCTGGCTTCAGAATCGCGAACTTTTCTGTAAAAGGGAAAAAAGTTCAGAGTTCAGAACTGGGC
ATGCCGCCATGGTGTTCTTTTTTTCGCCGTGCCTGATCTGGATCGTGCACAACATTGCAGGGCGTACTACCGTTGCACGT
ACCAAAAGACTCAGGGATGCGCGGCGACGAAGCAGGTGCAGCGCGCCGACGAGGACCCGGCGCTCTTCGACGTGATCTAC
CACGGCGAGCACACCTGCGTCCATAAGACGGCGGCGGCGGCGG------------TGCAGCCGGCCGGGCAGAACCCGGG
CGCGGAAAGCCTTCTGCAGAGCCTGAGCTCGAGCCTGACGGTGAAGACCGAGGGGCTC------ACGGCGGCGGGAGCG-
--CAGGGCTGGAGCGCCACCACGCCCTTCAGCTTCTCCTCGCCGGCGGTGAGCGGCATGACGCCGCCGGA---GCACCAC
CCGTTCTCCACGCCGTCGACGCCGGAGAACTGCTT---------CGTGTCGATGCCCACGTCGCTCGAACCCTCGCCGGC
GACCTCGGGCTCGAACCACATGTGCATGACCCCGTTCCATGCGCAGT---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>SNPs
SSSS-----S---------SS-S-----S---------------S--------------------SSS-------S--S-
SS--------S------------------S--S------------S--------S--S--S-----S-S-S-SS----S-
----S-S-S--SS-S-------------------S-----------S----S---S-SSSSSSSSSSS-------S-S--
----------S--S--SS---------------------------------S------S------------S--S-SSS-
--S------S-----SS---------S-------S---S------------S-S---S-----------S---S------
-SSS-----S---------S----SSSSSS-----------------SS---------------------SS--SS-SSS
SS---------------------------S--------------------SS-S-S------------------------
---SSS---------------------------S----------------------------------------S-----
-----S--S-------S-----------------------------------------S--S-------S----------
-------S-----------------------S------------------S------------------S----------
---------------------S--------S-------------S-----------------------------------
-------S-------------------------------------S-----S----------------------------
-------------------S--SS--S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
----------------S---------------------------------------------------------------
----------------S---------------S-----------------------------------------------
-----------------------S--------------S-----------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------S-----------
---S--------------------------------------------------------------------S-------
--------------------------------------S-----------------------------------------
----S--------S--------------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
-----------------------------------------S--------------------------S-----------
-----------------------------S--------------------------S-----------------------
----------S--S---------------------S--------------------------------------------
---------------------------------------------------------------------S----S-----
---S---------------SS------------------SS----------------S----------------------
----S-------------------------------------------------------S-------SSSSSSSSSSSS
SSSSS--------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS
>forward_29
---------GACGGTAGCCACGGAGTAAG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------
>reverse_1297
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------GGGCATGCCTTTCCATACCA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>forward_478
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GTGTTGAGCACCTGGATCCT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>reverse_2537
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GGTCTGAGTACGACGAGGTG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>forward_2510
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TCGAACCGCTTCTCCATGAG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>reverse_3527
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AGGACCAAGAGCACGACAAG------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
