>input_sequence_51610
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------------------ATGTCGGTCTTAATCGTCACCAGCGAGGGCGATCTCGTTGTCGATCTGCACACCGATCAGTG
CCCCCGAACCACCTACAACTTTCTCAAGCTCTGCAAGATGAAGTACTACAATGGGTGCCTGTTCCACAAGGTGGCCAAAG
ATTTCGTGGCACAGACCGGGGACCCGACCGGGACCGGCGCCGGCGGCGATTCCGTCTACAAGTTCCTCCACGGTGACCAG
GCTCGGTTTTTCAACGACGAGATCCACCCGGAACTGAGGCATTCAAAGATCGGCACCGTCGCGATGGCAAGCGCCGGCAA
AAACCGCAACGCCTCGCAGTTCTACATCACGCTGCGGGACGACGTGGAATACCTCGATGATAAACACACTGTGTTTGGGG
TAGTTGCTGAAGGTGAAGGTCTTGACACACTGACGAAGATAAATGAATCATATGTTGATGCTGATGGGAGGCCATTCAAG
GACATAAGGATTA-------AACATACTTATGTGTTGTATGACCCTGACGATGATCCTGCTGAGCTTGCTGAGCTTGTTC
CTCCAAATTCGCCCATTGGAAAGCTGATCGACGAGATTGGAGAGGAGCGCTTAGAGGATACTTGGGTCCCTCTCGATGAA
ACAGTGGACCCTGCGCAGCTTGAGGAGATGATCCGCTCTAAAGAAGCACA---TACGAATGCCGTGATCCTTGCGAGTAT
---------CGGAGACATTCCAGATGCCGAGGTCAAGCCACCAGACAATGTCTTGTTTGTTTGTCAACTCAACCCAGTGA
CACAGGATGAGGATCTGTATACAATCTTTTCTCGTTTCGGAACCGTGACATCGGCCGAAACAATCCGCGACTACAAGACT
GGTGACAGCCTGTGTTATGCTTTCGTTGAGTTCGAGGCAAAGGAAGCCTGCGAGCGTGCACACAGGGATATGAACAATTG
TCTGATTGATGACCGAAGGATTCAAGTTGATTTTAGTCAGAGCGTTTCAAAGTTGTGGCGACAGTTCAGACAGGGCACGC
GGAATGCAAGTAAAGATGGGTGCTTCAAAGGTCATGCCCCTGACTACCAAGCCCGAGATCTGGATAAGGGTTTTGAGAAG
AAAAACAAGGACCGAGATTATGTTCTGAAAGATGAAAACACTCAGCGAGGTGGCAGTAACCGTCGCAGTTATGATTTAGT
CTTTGATGAGGACGGTGCTAGTGCTGGTAATAAGCAAGATCGTCGAAATGGCGATCGAAGAAAGGCCCAGAAATTGGGCG
ATTGGCGATCAGAGGTACCACACAAGCGTGATCGT---------------GATAGGAACAACAGGGAGAAACTCCATACT
AGCAAGGAAGGGGGGCGGAGGCGCGATGACCACATCAGTTACGATAGATCTAGTGATCGAAGCTATAGTAGGCGCAACAA
TCTTTCCCTCTTTCCCTCCCTATATATCCCTCCCTATATATATATATAG-------------------------------
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--------------------------------------------------
>chr4A_1_TraesCS4A01G064400
CAACATACTCAAGTCCAAAATGTTAGAGCCCCAGTTGGATGACTTTTTTTTGGAAATTTTGGGTCTAAATATAATGTCAT
CGGTAATGCTATTCAACTGACGTTCGGTGAGGGGATGACAAATCGAACGTTTTTTATGGTAATTTATATTGTCGCGAGGA
TGACTACTTAATTGGTAAACACAACAAATCCTATAAAAAAACCTGAGGCGCATTCATCATACTTGTCAATTAGACGTGTC
ATCCTCGGTCAATATAAATCTTCATGCAAATCCTTTTCAGTTTCCTTGCGTCCCAACTGATGTTCGCTGGTTAAAAGGGT
CCAATGACCAAGTGGCCAGCTTGGTAAGCTACCAATAGAAATTACAATTAAAAAGCGGATTTGCTATTTTACAGTCGAGT
GTTTTTGAAAAAAAAATGAACACATGTTTTGTGAATTTTTTTTTCAAAAATCGGTCTTTGGAGACCAACTCGGAGCACCA
GCTCAGGTCGGTTCGTCGTAACCGCCTTGTTCAATGGCCGAACCTGATGGCTGACGCCTAACCCTGCCTCCTCTCT--CC
GCCCGCCGCCGCCGC------------CTTCCAATCCTCCGCTCTCCTCGTCCGCACCCGCAGCGGCCGCGCCCAAGCGC
CGACGGAAGGATTACTACGCTACGCTGAGCGTCTGCCGCGACGCCACCCTCCCGCGCAACGC-AAGGTGCTTGCTCTCTT
CCCGCCTCCCCC---TATCTCTCGTGTTGTCCAACAATACAAGTAAACGGATTCATCCCTAATTCGGTTCGAAATCCTCG
CAGGATTCGGGGGACTCGCGGAGCCTTTTG-ATCTCGGCATTGT----------TGATTCC--TAATCAGGCGAGACGCC
GACGGCGATTCTGGGTTACCCACCGGCCACCTGATCTACCCTGTCCACGCCTCAAAAGGTCGAGGTCGCCGGCCACACTC
ACCACCGCGGCTCCGTCCCGGTACAG---------------------------GTTGCTGCCCCATTACAGCCGGTTGGC
TAGGGGAGTACTGCGGATATGTCGGTCTTAATCGTCACCAGCGAGGGCGATCTCGTTGTCGATCTGCACACCGATCAGTG
CCCCCGAACCACCTACAACTTTCTCAAGCTCTGCAAGATGAAGTACTACAATGGGTGCCTGTTCCACAAGGTGGCCAAAG
ATTTCGTGGCACAGACCGGGGACCCGACCGGGACCGGCGCCGGCGGCGATTCCGTCTACAAGTTCCTCCACGGTGACCAG
GCTCGGTTTTTCAACGACGAGATCCACCCGGAACTGAGGCATTCAAAGATCGGCACCGTCGCGATGGCAAGCGCCGGCAA
AAACCGCAACGCCTCGCAGTTCTACATCACGCTGCGGGACGACGTGGAATACCTCGATGATAAACACACTGTGTTTGGGG
TAGTTGCTGAAGGTGAAGGTCTTGACACACTGACGAAGATAAATGAATCATATGTTGATGCTGATGGGAGGCCATTCAAG
GACATAAGGATTA-------AACATACTTATGTGTTGTATGACCCTGACGATGATCCTGCTGAGCTTGCTGAGCTTGTTC
CTCCAAATTCGCCCATTGGAAAGCTGATCGACGAGATTGGAGAGGAGCGCTTAGAGGATACTTGGGTCCCTCTCGATGAA
ACAGTGGACCCTGCGCAGCTTGAGGAGATGATCCGCTCTAAAGAAGCACA---TACGAATGCCGTGATCCTTGCGAGTAT
---------CGGAGACATTCCAGATGCCGAGGTCAAGCCACCAGACAATGTCTTGTTTGTTTGTCAACTCAACCCAGTGA
CACAGGATGAGGATCTGTATACAATCTTTTCTCGTTTCGGAACCGTGACATCGGCCGAAACAATCCGCGACTACAAGACT
GGTGACAGCCTGTGTTATGCTTTCGTTGAGTTCGAGGCAAAGGAAGCCTGCGAGCGTGCACACAGGGATATGAACAATTG
TCTGATTGATGACCGAAGGATTCAAGTTGATTTTAGTCAGAGCGTTTCAAAGTTGTGGCGACAGTTCAGACAGGGCACGC
GGAATGCAAGTAAAGATGGGTGCTTCAAAGGTCATGCCCCTGACTACCAAGCCCGAGATCTGGATAAGGGTTTTGAGAAG
AAAAACAAGGACCGAGATTATGTTCTGAAAGATGAAAACACTCAGCGAGGTGGCAGTAACCGTCGCAGTTATGATTTAGT
CTTTGATGAGGACGGTGCTAGTGCTGGTAATAAGCAAGATCGTCGAAATGGCGATCGAAGAAAGGCCCAGAAATTGGGCG
ATTGGCGATCAGAGGTACCACACAAGCGTGATCGT---------------GATAGGAACAACAGGGAGAAACTCCATACT
AGCAAGGAAGGGGGGCGGAGGCGCGATGACCACATCAGTTACGATAGATCTAGTGATCGAAGCTATAGTAGGCGCAACAA
TCTTTCCCTCTTTCCCTCCCTATATATCCCTCCCTATATATATATATAGCTTCTGGTCGTCCGTCGTCGCTGGCG-TTTT
GCGAAAAAGCCCCTCGGTTTATAAAAAATCAACCCGCAGTCCCTGTTTTAGTATGGGTCTCTATATAACATTACATTTTG
CAGAAAACCCCCTGTATTCATTAGATTTGCATTCGCTATCCTCGTAGTCTTATCCATTTCG------ATGGCGATGGCGA
TGGT----------------------------------GCGACGGGTTTCTCTGGCGACGGCGGCGGCGACGGGTTGAGG
GCTGCGGGGATGCCGCGGCGAGGAGGGGAAGATGCTGCGGAGGCGACACAGTGAGGTGGGGCAGTGGCGGTTGTGCGGCA
AGGCAGGGCAGGTCCGGCCGAGACGGCGCGCGGCGAGGCGGGGGAGTGGCGTCGCGGGGGAGGATGGAGGACGCCAGAGT
AGAGGACGACAGCTCCCGCCGTCGCTGCTGTCCGCGCACACCCGCGTGCTCGCCTCCGTCCGCGCCCACGCCAGAGCGCT
GCTTTCTGTGCACACCCGCGTGCTCGCCCTTCAGCTTGCCTCTGCCCGCACCCCACCACACGCGCGCCGGCCAGCCCAGC
CACCGGGAACGCCCCCTTCCTCCTACCCCCGATCTAGATTTCCCAAAACGCCTCCCCAGACACCCGTAGGGCGCCCCGTC
GATCCAGCTTCGGCTCCACAGCTGGCCAGCGCCGCACTACTGCCAAGGACGGTGCGGACACGCCGGCGGCGAGCACTTAC
TAGGTGACCAACACCTCCTTCTCTCTTCCTCTCAGCCTGCTGCTCACTCTGTACATACGCACTCGATGTGTCTGTGTTCA
GAATTTCGGATTGGGCTGTGTACTTGCTCTTGCAACTTTTACTTGGGGAATTCTGAAATTCCACTCGCACGTGTGCTGGA
ATCGAGTCACTAAATGTCGTGACTTTGTACAGGCGCCAAGGGGAGTTCTGGTACCTTAGGATTTGTGGCAATTTCTTTGC
GAGTTGCTAACCAGACTTGGCGAATTGGGGGCTTTATTCATGTGTTTGTT
>chr4D_400
TGTTTCTAAAAAGAG-----------------------------------------------------------------
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-----------AAAATTGAACACATGTTTTTTATTTTCTCAAAG------TCGGTCTTTGGAGACCAACTCAGAGTACCA
GCTCAGGTCGGTTCGTTGTAACCGCCTTGTTCAATGGCCGAACCTGATGGCTGACGCCTAACCCTGCCTCCTCTCT--CC
GCCCCCCGCCGCCGCCGCCGCCGCTTTCTTCCAATCCTCCGCTCTCCTCGTTCGCCCCCGCGGCGGCCGCGCCCAAGCGC
CGACGGAAGGACCAATACGCTACGCTGAGCGTCTGCCGCGACGCCACCCTCCCGCGCAACGC-AAGGTGCTTGCTCTCTT
CCTTCACCCCCC---TATCTCTCGTGTTGTCGAACAATACAATGAAACGGATTCATCTCTAATTCCGTTCGAACTCCTCG
CAGGATTCGGGGGACCCGCAGAGCCTTTTGCATCTCGGCATTGCCATAATACCCGACTCCTAATAATCAGGCGAGGCGCG
GACGGCGACTCTGGGTTACCCGCCGGCCGCCTGATCTACTCTGTCAA----------------------CGGCCACACTC
ACCTCCGCGGCTCCGTCCTGGTACAGCTCGCTACCCGTGCGGTCGTCTCTCAGGTCGCTGCCCCATTACAGCCGGT-GGC
TAGGGGAGTACCGCGGATATGTCGGTCTTAATCGTCACCAGCGTGGGCGATCTCGTGGTGGATCTCCACACCGATCAGTG
CCCCCGCACCACCTACAACTTCCTCAAGCTCTGCAAGATGAGGTACTACAACGGGTGCCTGTTCCACAAGGTGGCCAAGG
ATTTCGTGGCGCAGACCGGGGACCCGACCGGGACCGGCACCGGCGGCGATTCCATGTACAAGTTCCTCCACGGTGACCAG
GCTCGGTTTTTCGACGACGAGATCCATCCGGAACTGAGGCACTCAAAGATTGGCACCGTTGCCATGGCGAGCGCCGGCAA
AAACCGCAACGCCTCGCAGTTCTACATCACGCTGCGGGACGACGTGGAATACCTCCATGATAAGCACACCGTGTTTGGGA
TAGTTGCTGAAGGTGAAGGCCTTGACACACTGACGAAGATAAACGAATCATATGTTGATGGTGAAGGGAGACCTTTCAAG
GACATAAGGATTA-------AACATACTTATGTGTTGTATGACCCTGACGATGATCCTGCCCAGCTTGCTGAACTTGTTC
CTCCAAATTCTCCCATTGGAAAGCCGATCGACGAGATTGCAGAGGAGCGCTTAGAGGATACCTGGGTCCCTCTCGATGAA
ACAGTGGACCCTGTGCAGCTTGAGGAGATGATCCGCTCTAAAGAAGCACA---TACAAATGCCGTGATCCTTGCGAGTAT
---------TGGAGACATTCCAGACGCCAAGGTCAAGCCACCAGACAATGTCTTGTTTGTTTGTCAACTCAACCCAGTGA
CACAGGATGAGGATCTGTATACGATCTTTTCTC------GAACCGTGACATCAGCTGAAACAATCTGTGACTACAAGACT
GGTGACAGCCTGTGTTATGCTTTCATTGAGTTCGAGGCAAAGGAAGCCTGCGAGCGTGCACACAGAGATATGCAAAATTG
TCTGATTGATGCTCGGAGGATTCATGTTGATTTTAGTCAGAGCGTTTCAAAGCTGTGGCGTCAGTTCAGACAGGGCACGC
GGAATGCAAATAAAGATGGGTGCTTCAAGCGTCATGCCCCTGATTACCGAGCCCGAGATCTGGATAAGGGTGCTGAGAAG
AAAAACAAGAACCGAGATTATGTTCTGAGAGATGAAAACACTCAGCGAGGTGGCAGTAACCGTCGAAGTTATGATTTAGT
CTTTGATGAGGACGGTGCTAGTGCTGATAATAGGCAAGATTGTCGAAATGCTGATAGAAGAAAGATCCAGAAATTGGATG
ATTGGAGGTCAGAGGCATCACACAAGCGTGATCGTGATAGGACCAACAGGGATAGGAACAACAGGGAGAAACTCCATATT
AGTGAGGAAGGGGGTCGGAGGCACGATGGCCACATCAGTTACCATGGATCTAGTGATCGAAGCTATAGTAGACGCAACAA
T-------------------------------------------------------------------------------
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--------------------------------------------------
>chr4B_451
--------------------------------------------------------------------------------
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--------------------------------------------------TCGGTCTTTGGAGACCAACTCAGAGTACCA
GCTCAGGTCGGTTCGTTGTAACCGCCTTGTTCAATGGCCGAACCTGATGGCTGACGCCTAACCCTGCCTCCCCTCTCTCC
GCCCGCCGCTGCCGC------------CTTCCAATCCTCCGCTCTCCTCGTTCGCACCCGCGGCGGCTGCGCCCAAGCGC
TGACGGAAGGACAACTACGC-ACGCTGGCCATCTGCCGCGACGCCACACTCCCGCGCAACGCAAAGGTGCTTGCTCTCTT
CCTGCCTCCCCTATATATATCTCGTGTTGTCCAACAATACAAGTAAACAGATTCATCTCTAATTCGGTTCGAACTCCTCG
CAGGATTCGGGGGACTCGCAGAGCCTTTTGCATCTCGGCATTGCCATAATACCCTGACTCC--TAATCAGGCGAGGCGCG
GACGGCGACTCTGGGTTACCCACCGGCAGCCTGATCTGCCCCGTCCACGCCTAAAAAGGTCGTGGCCACCGGCCACACTC
ACCTCCGCGGCTCCAG------------------CCGTGCGGTTGT--CTCAGGTCGCTGTCCCATTACAGCCGGT-GGC
TAGGGGAGTGCCGCGGACATGTCGGTCTTAGTCGTCACCAGCGTGGGCGATCTTGTGGTGGATCTCCACACCGATCAGTG
CCCCCGCGCCACCTACAACTTCCTCAAGCTCTGCAAGATGAAGTACTACAACGGGTGCCTGTTCCACAAGGTGGCCAAGG
GTTTCGTGGCGCATACCGGGGACCCGACCGGGACCGGCAATGGCGGTGATTCCGTGTACAAGTTCCTCCATGGTGATCAG
GCTCGGTTTTTCGACGACGAGATCCATCCCGAACTGAGGCACTCAAAGATTGGCACGGTCGCCATGGCAAGCGCCGGGCA
AAACCGCAACGCCTCGCAGTTCTACATCACGCTGCGGGACGACGTGGAATACCTCGATGATAAGCACACCGTGTTTGGGA
TAGTTGCTGAAGGTGAAGGTCTTGACACACTGACGAAGATAAACGAATCATATGTTGATGGTGATGGGAGGCCATTCAAG
GACATAAGGATTA-------AACATACTTATGTGTTGTATGACCCTGACGATGATCCTGCTGAGCTTGCTGAACTTATTC
CTCCAAATTCTCCAATTGGAAAGCCGATCGACGAGATTGCGGAGGAGCGCTTAGAGGATACCTGGGTCCCTCTCGATGAA
ACAGTGGATCCTGTGCAGCTTCAGGAGATGATCCGCTCTAAAGAAGCGCA---TACGAATGCCGTGATCCTTGCGAGTAT
---------TGGAGACATTCCAGATGCCGAGGTCAAGCCACCAGACAATGTC----TTGTTTGTCAACTCAACCCAGTGA
CACAGGATGAGGACCTGTATACAATCTTTTCTCGCATCGGAACCGTGACATCGGCTGAAACAATCCGTGACTACAAGACT
GGTGACAGCTTGTGCTATGCTTTTGTTGAGTTTGAGGCAAAGGAAGCCTGCGAGTGTGCACACAGGGATATGAACAATTG
TCTGATTGATGACCGGAGGATTCAAGTTGATTTTAGTCAAAGCGTTTCAAAGTTGTGGCGTCAGTTCAGACAGGGCACAC
GGAATGCAAGTAAAGATGGGTGCTTCAAGCGTCATGCCCCTGATTACCGAGCCCGGGATCTGGATAAGGGTGCTGAGAAG
AAAAACAAGGATCGAGATTATGTTCTGAGAGATGAAAACACTCAGCGAGGTGGCAGTAACCATCGAAGTTATGATTTAGT
CTTTGATGAGGACGGTGCTAGTGCTGGTAATAAGCAAGATCATCGAAATGGTGATCGAAGAAAGGCCCAGAAATTGGGGG
ATTGCCGATCAGAGGTACCACACAAGCGTGATCGT---------------GATAGGAACAACAGGGACAAACTCCATACT
AGCGAGGGAGGGGGTCGGAGGCATGATGACCACATCAGTTACGATAGATCTAGTGATCGAAGCTATAGTAGACGCAACAA
TC------------------------------------------------------------------------------
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>chr3B_1112
AATGGGC-------------------------------------------------------------------------
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-------------------------------------------------------TGCCTCTTCCACAAGGTGGAGAGGG
ATTTCCTGGCACAGACCGGGGACCCAACCGGAACCGGCACCGGAGGTGATTCTGTGCACAAGATCCTTCATGGAGACCAA
GATCGGTTTTTCAACGACGAGATCCGTCCGGAATTGAGGCATTCAAAGGCAGGCACCATCGCCATGGCAGGT--------
----------GCATCGCAGTTCTACTTCACCTTGCGGGACGGCGTGGACGGTCTTGATGGTAAACACACTGTGTTTGGGA
TGGTCGCTGAAGGTGAAGGTTTCGACACACTCGCAAAGATAAATGAATCATCCGTTGATGATAAAGGGAGGCCATTCATG
GACATAAGGATTAAACAATAAACATACATATGTCTTGGACGATCCTTTCGACGATCCTCCCCAGCTCGCAGAACTCATCC
CTACGAATTCTCCTGTGGGAAAGCCACGTGATGAGATTGCAGAACAGCGCTCCGAGGTCCCTTTCGA-------------
-----------TGAGCAGCTTGAGGAGATGACCTGCTCTGAAGATGCACTCTCTAATAATGTCGTCATCGTTAGCTGCGA
TCACTGCGGCGGACACATTCCAGGAGTCGAACAGG------CAGACAATGTCTTGTATGTTTCTGAACTTAACCCAATTA
CACAAGACGAGGATCTGCGTACAATCTTTTCTCGTTTCGGAACCGTGACATCGGCTGAAATAATTCGTGACAGCAAGACT
GGAGATAGCTTATGCTATGCTTTCATTGAATTTGAGGCAAAGGAGGCCTGTGAGCGTGCATATTGTAAGATGGAGAATAG
CCTGATTCATGACAGGAGGATCCAGGTTTATTTTACAGTAGGTGTTCCAAAACTGTGGGGTCGGTTCTGGCAAAGCAAAC
AAAAAGCAAATAAAGATGGGCGCCTCAAGTGTGATGCCCCAGATCACCTGGCCCGAGATTGTGATCAACGTGTTGAGGAG
GAAAACAAAGGCACCAATTCTGTTGTGAAAGATCAAAACACTCACAGAGGCGGGAACAACCGCAGAAGTTATGATTTAGT
ATTCGACGATGACGGTACTAATGCTG---ATCTGGAAGATCGTCCAGGTGCCGATCGAA---------------------
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>chr3A_2437
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------------------------------------------------GCTTCTGGTCGTACGTCGTCG---TCGTTTTT
GCGAAAAAGCCCCTCTGTTTCTCTGAAATTAACCCGCAGTCCCTGTTTTAGTAA--GTCTGTATATAAAGTTACATTTTG
CAGAAAACCCCCTGTATTCATTAGATTTGCATTCGCTATCCTCGTAGTCTTATCCATTTCG------ATGGCGATGGCGA
TGGTGATGGCGACGGCGAC------------------GGCGACGGGTTTCTCTGGCGACGGCGGCGGCGACGGGTTGAGG
GCTGCGGGGATGCCGCGGCGAGGAGGGGCAGATGCTGCGGAGGCGACACAGTGAGGTGGGGCAGTGGCGGTTGTGCGGCA
AGGCAGGGCAGGTCCGGCCGAGACGGCGCGCGGCAAGGCGGGGGAGTGGCGTCGCGGGGGAGGATGGAGGACGCCAGAGT
AGAGGACGACAGCTCCCGCCGTCGCTGCTGTCCGCGCACACCCGCGTGCTCGCCTCCGTCCGCGCCCACGCCAGAGCGCT
GCTTTCTGTGCACGCCCGCGTGCTCGCCCTTCAGCTTGCCTCTGCCCGCACCCCACCACACGCGCGCCGACCAGCCCAGC
CACCGGGAACGCCCCCTTCCTCCTACCCCCGATCTAGATTTCCCAAAACGCCTCCCCAGACACCCGTAGGGCGCCCCGTC
GATCCAGCTTCGGCTCCACAGCTGGCCAGCGCCGCACTACTGCCAAGGACGGTGCGGACACGCCGGCGGCGAGCACTTAC
CAGGTGACCAACACCTCCTTCTCTCTTCCTCTCAGCCTGCTGCTCACTCTGTACATACGCACTCGATGTGTCTGTGTTCA
GAATTTCGGATTGGGCTGTGTACTTGCTCTTGCAACTTTTACTTGGGGAATTCTGAAATTCCACTCGCACGTGTGCTGGA
ATCGAGTCACTAAATGTCGTGACTTTGTACAGGCGCCAAGGGGAGTTCTGGTACCTTAGGATTTGTGGCAATTTCTTTGC
GAGTTGCTAACCAGACTTGGCGAATTGGGGGCTTTATTCATGTGTTTGTT
>chr7A_2437
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------------------------------------------------GCTTCTGCCCGTACGTCGTCG---GCGTTTTT
GAGAAAACGCCCCTCTGTTTCTTTGAAATTAACCCGCAGTCCCTGTTTTAGTAA--GTCTGTATATAACGTTACATTTTG
CAGAAAATCCCCTGTATTCATTAGATTTGCATTCGCTATCCTCGTAGTCTTATCCATTTCG------ATGGCGATGGCGA
TGGCGATGGCGACGGCGAC------------------GGCGACGGGTTTCTCTGGCGACGGCGGCGGCGACGGGTTGAGG
GCTGCGGGGATGCCGCGGCGAGGAGGGGCAGATGCTGCGGAGGCGACACAGTGAGGTGGGGCAGTGGCGGTTGTGCGGCA
AGGCAGGGCAGGTCCGGCCGAGACGGCGCGCGGCGAGGCGGGGGAGTGGCGTCGCGGGGGAGGATGGAGGACGCCAGAGT
AGAGGAAGACAGCTCCCGCCGTCGCTGCTGTCCGCGCACACCCGCGTGCTCGCCTCCGTCCGCGCCCACGCCAGAGCGCT
GCTTTCTGTGCACGCCCGCGTGCTCGCCCTTCAGCTTGCCTCTGCCCGCACCCCACCACACGCGCGCCGGCCAGCCCAGC
CACCGGGAACGCCCCCTTCCTCCTACCCCCGATCTAGATTTCCCAAAACGCCTCCCCAGACACCCGTAGGGCGCCCCGTC
GATCCAGCTTCGGCTCCACAGCTGGCCAGCGCCGCACTACTGCCAAGGACGGTGCGGACACGCCGGCGGCGAGCACTTAC
CAGGTGACCAACACCTCCTTCTCTCTTCCTCTCAGCCTGCTGCTCACTCTGTACATACGCACTCGATGTGTCTGTGTTCA
GAATTTCGGATTGGGCTGTGTACTTGCTCTTGCAACTTTTACTTGGGGAATTCTGAAATTCCACTCGCACGTGTGCTGGA
ATCGAGTCACTAAATGTCGTGACTTTGTACAGGCGCCAAGGGGAGTTCTGGTACCTTAGGATTTGTGGCAATTTCTTTGC
GAGTTGCTAACCAGACTTGGCGAATTGGGGGCTTTATTCATGTGTTTGTT
>chr3B_2439
TTCTG---------------------------------------------------------------------------
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--------------------------------------------------------CCGTACGTCGTCGCGCACGATTTT
GCATTAAAACCCCTCGGTTTACATTAAATTAATCCGCAATCACTGTTTTAGTAA--GTGTGTATATAACGTTACATTTTG
TAGAAAACCCCCTGTATTCATTAGATTTGCATCCGCTGTCCTCGTAGTCTTATCCAGTTCTCTGGCAATGGCGATGGCGA
TGGCGATGGAGACGGCGAC------------------GG------GTTTCTCTGGCGATGGAGACGGCGACGGGTTGAGG
GCTACGGGGACGCCGCGGCGAGGAGGGGCAGGTGCTGCGGAGACGGCGCGGTGAGGTGGGGCAGTGGCGGTTGTGCGGCG
AGGCAGGGCAGGTGCTGCAGAGACGGTGCATGGCGAGGCGCGACAGTGGCGTCGCGGGCGAGCATGGAGGACGCCGGAGC
AGAGGACGACAGCTCCTGCCGTCGCTTCTGTCCGCGCACGCCCGCGTGCTCGCCTCCGTCCGCGCCCGCGCCGGAGCGCT
GCTTTCTACGCGCGCTCGCGTGCTCGCC----------------------------------------------------
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>chr3B_2444
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-------------------------------------------------------GTCGTACGTCGTCGCGCGCGATTTT
GCATTAAAGCCCCTCGGTTTATATGAAATTATTCCGCAATCCCTGTTTTAGTAA--GTCTGTATATAATGTTACATTTTG
CAGAAAACCCCCTGTATTCATTAGATTTGCATTCTCTATCCTCGTAGTCTTATCCATTTCG------ATGGCGATGGCGA
TGGTGATGGCGATGGCGACGGCGACGGCGACGGCTACGG------GTTTCTCTGGCGACGGCGGCGGCGACGGGTTGAGG
GCTGCGGGGATGCCGCGGCGAGGAGGGGCAGGTGCTGCGGAGGCGACACAGTGAGGTGGGGCAGTGGCGGTTGTGCGGCA
AGGCAGGGCAGGTCCGGCCGAGACGGCGCGCGGCGAGGCGGGGGAGTGGCGTCGCGGGGGAGGATGGAGGACGCCAGAGT
AGAGGACGACAGCTCCCGCCGTCGCTGCTGTCCGCGCACACCCGCGTGCTCGCCTCCGTCCGCGCCCACGCCAGAGCGCT
GCTTTCTGTGCACGCCCGCGTGCTCGCCCTTCAGCTTGCCTCTGCCCGCACCTCACCACCCGCGCGCCGGCCAGCCCAGC
CACCGGGAACGCCCCCTTCCTCCTACCCCCGATCTAGATTTCCCAAAACGCCTCCCCAGACACCCGCAGGGCGCCCCGTC
GATCCAGCTTCGGCTCCACAGCTGGCCAGCGCCGCACTACTGCCAAGGACGGTGCGGACACGCCGGCGGCGAGCACTTAC
CAGGTGACCAACACCTCCTTCTCTCTTCCTCTCAGCCTGCTGCTCACTCTGTACATACGCACTCGATGTGTCTGTGTTCA
GAATTTCGGATTGGGCTGTGTACTTGCTCTTGCAACTTTTACTTGGGGAATTCTGAAATTCCACTCGCACGTGTGCTGGA
ATCGAGTCACTCAATGTCGTGACTTTGTACAGGCGCCAAGGGGAGTTCTGGTACCTTAGGATTTGTGGCAATTTCTTTGC
GAGTTGCTAACTAGACTTGGCGAATTGGGGGCTTTATTCATGTGTTTGTT
>SNPs
S-SSSSSSSS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS----S--------------S-SSS--S-SSSSSSSSSSS---------------------S---S----
----------------S---------------------------------------------------------------
---------------------------------------------------S---------S------------------
-----------SS-------------------------------------------------------------------
--S------------------------------------------------------S---------------S------
-------------------S-----------------------S-------------------------------S---S
--------S-------------------S-----------------------S---------S--S-S------------
---S--------------S------------------------------------S--------------------S---
-----------S-------------------------------S------------S--S-----S--------------
------S--------------S-----------------------------S--------------------------S-
--------------------------------------S----------------S------------------------
--------------------------S-----------------------S-----------S-----------------
-------------------------------------------------------------------------------S
------------------------------------------------------------S-------------------
------------------------------------------------------------------------S-------
----------S-------------S--------------S----------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S-----------S------------
--------------------------------------------------------------------------------
---------------S--------------------------------------------S-------------------
----------------------------SS-------------S----S----------------------S--------
-----------------------------------------------------------------S--------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
---S----------S-------S------------------------------------------------S--------
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S---------SS--------
-----------------------SS----S-----------------------SSS----S--------S----------
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----------------------------S---------------------------------------------------
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-------------S------------------------------------------------------------------
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S-------------------------------------------------------------------------------
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--------------------------------------------------
>forward_112
--------------------------------------------------------------------------------
------------TCAACTGACGTTCGGTGAGG------------------------------------------------
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>reverse_1100
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-----------------------------------------------------------CGATCTGCACACCGATCAGT-
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--------------------------------------------------
>forward_476
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TTTGGAGACCAACTCGGAGC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>reverse_1611
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------GCCCATTGGAAAGCTGATCG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>forward_723
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------AAGGTGCTTGCTCTCTT
CCC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>reverse_2585
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------AAAATCAACCCGCAGTCCCT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
