>input_sequence_51603
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----------------------------------------------------------------ATGGAGCTCCTTACGC
TTCTTGCCACTGCTTGCTGCCTCCTCCTAGCTGCCGTAGCTCTCCGGCGAAGCACTAGGCGAGCCCATGCCCGCAGGACC
CTCCACCGTGTCCGTGACGCCGCTGTGGCCCATCGCGCACTCAACAAGAACGCGGACGCCTTCTTGGACCGTGCTGAAGG
CTTCTTCCCCGTTGTCCTCGGCACCGGGCTGCGCCGCGCCGAGCGGAACGAGACCATTGTCACGGCATCCCATGGCCCCC
ACTGGCGGGCGCTCCGCTGCAACCTCAGCGCCGACGTCCTACACCCGTCCCGCGTCGCTTCACTGGCACCGCTGCAGCAG
GAGGCCGCCCAGGCCCTCGTCGCCGGCCTGTTCGCCAAGGTCCAGGGCGAGGCCGCGTCTGTTGTTATCCGAGGCGACCT
GAACCGCGCTGCGTTCTCCCTGTTGGCGCGTATGTGCTTCGGCGACGGCGTCGACGGGCACTGCGTGGAGTCCATGGAGC
GCGAGATGCTGGATCTGCTGGCCACCGTCGGGGAGCTCATCCCCGTGGTGGACGGCTCGTGGCTGCCCCAGCTCCTGTAC
CGGAGGCAGCTCACCCACCTCATGGGCGCCCTCGGCAGGCAGAAGCTGATGTACCTTCCTCTCATCGACGCACGGAGGCG
ACCTGAATCTCGCGTCTATAGGGGCGGCGGCGTCGCCTATCCGTACGTGGACTCACTCCTTGATCTCCGCGTGCCCAA--
-------------CGGCGAGGGC---GGC--GGGCGGCGGGCGCTCAGGGACGACGAGCTCGTGTGCCTCGTATCCGAGT
TCCTCGGCAGCGGCTCGGGCTCCACCGTGGCCTGCGTGGAATGGACCCTGGCCCACCTCGTCGACAGACCGGAGGTCCAG
GACAAGCTGCGGCGCGAGATTGACGGCA---CCGACGGAGGCGCGG---------TCACCATCAAGAGCCTTCGCCGCGG
CATGCCGTACCTGAACGCCGTGGTGCTCGAGAGCCTGCGCATGCACCCGGCGGCGCCGTTCATGATGCGCGGGACGCACG
GTGACGGAGCCGGGGTGATG---G------GCGCGACCA---------CGGTGCCCAACGGCGACGGCTTGATGGTGCAG
TTCGTTCTAGGCGACATCGGAAGGGACAGCAAGGTGTGGACGGATCCTGACGAGTTCCGCCCTGAGCGGTTCCTGGCCGG
AGGCGAGGCGGAGGGCGTGGGCCCGTTGCCGGGACCCAAGGAGGTGAGGATGCTGCCGTTCGGTATAGGGCATAGGCACT
GCCCTGGCACGAGCTTCGCGATGCTGCAGGTCAAGTGCTTCCTGGCAGCGCTTGTGCGAGAGTTCGAGTGGGCGGATGAC
GACTGTGGGAGTACGGCT---GGTGGAGTCGACATGACGGAGCTGGACGTCTTCTTCAAGGTGATGAAGAAGCCCCTCTC
CGCACGTGTCATGCGACGTAGTAGTGTAAAATAA----------------------------------------------
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>chr2D_1_TraesCS2D01G599200
AAGCAAAAACAATGACTGCATCCAGCAAAAACAGTACATGGTGGAAGCAAAAACCTGGAGCTGTTTCTAGTAAAAAAA--
GATGATGGTAGCAATTTTTTTTGCTGGATCCAGCTTCCGGTGATGCCCGTGGTAGCATTCCGGTGGCTGGTTGCAGCATC
TCTGCGTCCCTCCTCCCACATCGAAAAAGCTGCAACTACGTGGGTCATAGCATCCCCGACGGCTGGTTCCAGCTCTCAGT
CGTGCCCGTTGTAGCCTCCTTGGCGCCGGTTGCAGCATCCCTGCATCACCTCTTGTGGTTCGCCTGGCTGCTCGATTGCA
GCTTTTGTTTTCGCCGGTCGTAGCTTTTTAGCTCACCAGTAGAAGCTCTCAGCTCTGCTAGTTGCAACATTGGTGGTCGC
CG-GCGAGGTCGACGTGGCCGCCCGATTGCAGCTTTCGCCATTGCCGGTCGTAGCTTTTTAGCACGCCGGTAG-AAGCTT
TCAGCTCCGCCAGTTGCAACATCGAGGAGTCGCCGGCATCGTCGCGCGCCTGCTAGTTGAGCTTCTAGCTCCACCGATTG
CAGAACCTTGCAACTCCTTTCCCCAGCCTCGCATCACATCTTGGAGTGGTCTCCACAGCACCGCTC-TCCTGCTCCAAAT
CTGCAGCGCCGCCACCCCTCC-AGTTCGCCGGACGCAGCTCAGGACGGCCTTGGCCTGCAGCAAGAAAAAGCGGC-AACA
ACCCCGACTTGTGCTCCGGCGTGGAAAG-TGGAAGGGAA-AAGAAGACAGAGGAAGGAAGAGGAACCAGTGGAGGAGAGC
AAACATGCAGCGTGA---------AA-GCTGGAAGAGAT-AAGGGATTGGGAGAA-GAAAAAGC-GGTGCTTGGCCCCAC
CATGTGTTACGCCCGC--GTGCGTCCGGCGCACCGGGTGGAAACGTTTCCATCGCCACTGCTTAGTGGAGTAGAATATAA
ATAGAAGACTGAGTATCGACATGAACACACACACACACACACAGAGCTCAATCGTTCAGTCAAAATGGAGCTCCTTACGC
TTCTTGCCACTGCTTGCTGCCTCCTCCTAGCTGCCGTAGCTCTCCGGCGAAGCACTAGGCGAGCCCATGCCCGCAGGACC
CTCCACCGTGTCCGTGACGCCGCTGTGGCCCATCGCGCACTCAACAAGAACGCGGACGCCTTCTTGGACCGTGCTGAAGG
CTTCTTCCCCGTTGTCCTCGGCACCGGGCTGCGCCGCGCCGAGCGGAACGAGACCATTGTCACGGCATCCCATGGCCCCC
ACTGGCGGGCGCTCCGCTGCAACCTCAGCGCCGACGTCCTACACCCGTCCCGCGTCGCTTCACTGGCACCGCTGCAGCAG
GAGGCCGCCCAGGCCCTCGTCGCCGGCCTGTTCGCCAAGGTCCAGGGCGAGGCCGCGTCTGTTGTTATCCGAGGCGACCT
GAACCGCGCTGCGTTCTCCCTGTTGGCGCGTATGTGCTTCGGCGACGGCGTCGACGGGCACTGCGTGGAGTCCATGGAGC
GCGAGATGCTGGATCTGCTGGCCACCGTCGGGGAGCTCATCCCCGTGGTGGACGGCTCGTGGCTGCCCCAGCTCCTGTAC
CGGAGGCAGCTCACCCACCTCATGGGCGCCCTCGGCAGGCAGAAGCTGATGTACCTTCCTCTCATCGACGCACGGAGGCG
ACCTGAATCTCGCGTCTATAGGGGCGGCGGCGTCGCCTATCCGTACGTGGACTCACTCCTTGATCTCCGCGTGCCCAA--
-------------CGGCGAGGGC---GGC--GGGCGGCGGGCGCTCAGGGACGACGAGCTCGTGTGCCTCGTATCCGAGT
TCCTCGGCAGCGGCTCGGGCTCCACCGTGGCCTGCGTGGAATGGACCCTGGCCCACCTCGTCGACAGACCGGAGGTCCAG
GACAAGCTGCGGCGCGAGATTGACGGCA---CCGACGGAGGCGCGG---------TCACCATCAAGAGCCTTCGCCGCGG
CATGCCGTACCTGAACGCCGTGGTGCTCGAGAGCCTGCGCATGCACCCGGCGGCGCCGTTCATGATGCGCGGGACGCACG
GTGACGGAGCCGGGGTGATG---G------GCGCGACCA---------CGGTGCCCAACGGCGACGGCTTGATGGTGCAG
TTCGTTCTAGGCGACATCGGAAGGGACAGCAAGGTGTGGACGGATCCTGACGAGTTCCGCCCTGAGCGGTTCCTGGCCGG
AGGCGAGGCGGAGGGCGTGGGCCCGTTGCCGGGACCCAAGGAGGTGAGGATGCTGCCGTTCGGTATAGGGCATAGGCACT
GCCCTGGCACGAGCTTCGCGATGCTGCAGGTCAAGTGCTTCCTGGCAGCGCTTGTGCGAGAGTTCGAGTGGGCGGATGAC
GACTGTGGGAGTACGGCT---GGTGGAGTCGACATGACGGAGCTGGACGTCTTCTTCAAGGTGATGAAGAAGCCCCTCTC
CGCACGTGTCATGCGACGTAGTAGTGTAAAATAATCCTAGCTAGGGTTCACATGCATGCATGCACATGCATGCTTGGTGT
TGCTTATTCGGTTTGTGCAGTGTTCCTTAATTCTCAGCTGTACGTGATCGTCGTCCTCCTTAGGATTGCTGACACGCATG
CATGGTGTTGTCATATTTATTTCCAGCGCGTAAGTCAAAGTGTATAACTGTGTGGTTTGCCCAAGTTTTACTTTCCTTCA
CTTCAAAAATAGTTTTATTTACTTTTCTTTGCGACGAGAAGCTGAGACTCGGATTGAGCTCAACTCACTGAGTTCAAGTG
ACATAACATGTAAGAAAGAAAAAAAAGTAAAGAACTTTTTGCGTGGATCTTAATGTAAGATCTTACGAACATAGCATCGA
CCGAGAGATAACAAAGTCTCAGTCGACATAGACTTAGCAAGACTCTTCCATCAAACAGGGTGGTTAGAGTTGTTGTCACA
ATATGTGATAGGATGGCCAATTTGTGAAACCAGCCGAGGGGCAGAGAAGTTGGTTTTAGACTACACTCGACACTCCATAT
ACAATCCACCAAAAAGCCGCCAAAAACACGAGTAGCATTAGGTCTTTACCTCTTTTGAAGGGGCCGAACCTAGATAAGCT
CTCCTGTATCAAGTCTATACCAGAACAACTCCAACGCTCGCATTTCCCCACAATTTATGATCGTTCCCATAGTAGCACTT
TCTCTTTGATGTCGAACCCGAGCTATATGGATACCCCCGGTAACAACCCTTGACAAGACCTGTTCGTGTGCCCCTAATGA
TCAGATCTTGCAAGTCGTCATGAAGTGTCAGGTAGGTGTGGCCCACACTTAGGCGTGACTCTGAGAACCCAGGTTCCACG
GGAACGACAATACGACAGATAATACAATCCGCCAAAAACACGAGTAGGATTTTTACCAAGTACTGTGCATAGGGGGGCCT
AACCTGTATAAATCTTTGTCTCCCGTGTGCTTCCATTCTGATCTACATGCATGACCCCTCTGAACGCAAATATA
>chr4A_1
AAGCAAAAACAATGACCACATCCAGCAAAAACAGTACATGATGGAAGCAAAAACCTGGAGCTGTTTCTAGTAAAAAAAAA
GATGATGGTAGCAATTTTTTT-GCTGGATCCAGCTTCCGGTGATGCCCGTTGTAGCACTCCGGTGGTAGGTTGCAGCATC
TCTTCGTGCCTCCTCCCACATCGAAAAAGTTGCAACTGCATGGGTCGTAGCATCCCCGGTGGCTGGTTCCAGCTCTCAGT
CGTGCCCGTTGTAGCCTCCTTGGCACCGGTTGCAGCATCCCTGCATCGCCTCTTGTGGTTCGCCTGGCTGCTCGAGTGCA
GCTTTTGTTTTTGCCGGCCGTAGCTTTTTAGCTCACCGGTAGAAGCTCTCAGCTCTGCTAGTTACAATATTGGTGGTCGC
CG-GCGAGGTCGACATGGCCGCCGGATTGCAGCTTTCGCCATTGCCGGTCGTAGCTTTTTAGCATGCCGGTAGAAAGCTT
TCTGCTCCGCCAGTTGCAACATCGAGGAGTCGCCGGCGTCGTTGCGCGCCTGCTAGTTGAGCTTCTAGCTCCACCGATTG
CAGAACATTGCAACTCCTTTCCCCAGCCTCGCTTCGCATCTTGGAGTGGTCTCCACAGCACTGCTC-TCCTGCTCCAAAT
CTGTAGCGCCGCCACCCCTTCTAGTTCGCCGGACGCAGCTCGGGACGGCCTTAGCCTACAGCGAGAAAAAGCGGC-AACA
ACCCCGACTTGTGCTCCGGCGTGGAAAG-TGGAAGGGAA-AAGAAGATAGAGGAAGGAAGGGGAACGAGTAGAGGAGAGC
AAACATGCAGCGTGA---------AAAGCTGGAAGAGATAAAGGGATTGGGAGAAAGAAAAAGC-GGTGCTCGGCCCCAT
CATGTGTTACGCTCGC--GTGTGTCCGGCG--------------------------------------------------
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>chr3B_1
AAGCAAAAACAATGACTGGATCCAGCAAAAAAAGTACAGGGTGGAAGCAAAAATCTAGAGCTGTTTCTAGTAGAAAAA--
GATGATGGTAGCAAAA-TTTTGGCTGGATCCAGCTTCCGGTGATGCCCGTGGTAGCACTCCGGTGGCAAGTTGCAGCATC
TCTACGTCCCTCCTCCCAAATCGAAAAAGCTCCAACTGCGTGTGTCGTAGCAT-CCCGGTGGCTGGTTCCAGCTCTCAGT
GGTGCCCGTTGTATCATCCTTGGCGCCGGTTGCAGCATCCTTGCATCGTCGCTCGTGGTTCGCCTGGCTGCTCGATTACA
ACTTCTGTTGTCGCCGGTCGTAGCTTTTTAGCTCACTGGTAGAAGCTTTCAGCT-CGCTAGTTGTAACATTGGTTGTCGC
TG-GCGGGGTCGGCATGGCCGCTCGATTGCAGCTTTCGCCATTGCTGGCCGTACCTTTTTAGCACGCCGGTAG-AAGCTT
TCAGCTCCGCCATTTGCAACATCGAGGAGTCGCCGGCGTGGTCGCGCACCTGCTATTTGAGCTTCTAGCTCCACCAGTTG
CAGAACCTT----CTCCTCTCCCCAGCCTCGCATCTCATCTCGGAGTTGTCTCCAAAGTACCGCTC-CCCTGCTCC-AAT
CTGCAGCGCCGCCACCCCTTC-AGTTCGCCGGACGCAGCTCAGGACGGCCTTCACCTGCAGCGAAAAAAA----------
------ACTTGTGCTCCGGCATGGAAGG-TGGAAGGAAG-AAGAAGATAGAGGAAGGAAGGGGAACGAGTGGAGGAGAGC
AAACATGCAGTGCGA---------AT-GCTGGAAGAGAT-AAGGCATTTGGAGAA-GAAAAAAGTGGTGCCTGGCCACAC
CATGTGTTTCGCCCGCTCGTGCGTCCGGCG--------------------------------------------------
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>chr7B_315
TGCAGC--------------------------------------------------------------------------
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---TTTTCTGTCGCCAGCCATAGCTTTTTAGCTCGCTGGTAGAAGCTTTTAGCTCCGCCAGTTGCAACATCGGTGGTCGC
CG-GCGTGGTCGGCATGGCCGCCCGATTGCAGCTTTCGCCGTTGCCGGTCGTAGCTTTTTAGCACGCTAGTAG-AAGCTT
TCAACTCCGCCGGTTACAACATCGAGGAGTCGCCGGCGTGGTCGCGCGCCTGCCAGTTGAGCTTCCAGGTCCACCGGTTG
CAGAACCTTGCAACTCCTCCCCACGTCCCCGCATCGCATCTC--AGTTGTCTCCACAGCACCGCTCTTCCTGCTCCAAAT
CTGCAGCGCCGCCACTCCTCT-ATTTTGCCGGTCGCAGCTCAGGACGGCCTTGGCCAGCAGCGAAAAAAAGCGGCGAATG
TCCTTGACTTGTGCTCCGGCGTGGAAAGGTGGAAGGGAAAAAGAAAGTGGAGGAAGGAAGGGGAATGAGTGGAGGAGAGC
GAACACTGTGTGTGCTGTGGCGTGAAAGCTTGAAGAGATAAGGGGATCGGGAGAGGAAAAACCACC--GCCTGGCCCCAC
CATGTGTAATGCCCGC--GTGCATCCGGCCCAACG---------------------------------------------
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>chr5B_315
TGCAGC--------------------------------------------------------------------------
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---TTTTCTGTCGCCAGTCGTAGCTTTTTAGCTCGCCG-TAAAAGCTTTTAGCTCCGCCAGTTGAAACATCGGTGGTCGC
CA-GTGTGGTCGGCATGGCCGCCCGATTGCAGCTTTCGCCGTTGCCGGTCGTAGCTTTTTAGCACGCTGGTAG-AAGCTT
TCAACTCCGCCAGTTACAACATCGAGGAGTCGCCGGCGTGGTCGCGTGCCTGCCAGTTGAGCTTCCAGCTCCACTAGTTG
CAGAACCTTGCAACTCCTCCCCACGTCCCCGCGTCGCATATCAGAGTTGTCTCCACAGCACCGCTCTTCCTGCTCCAAAT
CTGCAGCGCCGCCACTCCTCT-ATTTTACCGGTCGCAGTTCAGGACGGCCTTGGCCAGCAGCCAAAAAAAGCGGCGAATG
CCCTTGACTTGTGCTCCGACATGGAAAGGTGGAAGGGAAAAAGAAAGTGGAGGAAGGAAGGGGAACGAGTGGAGGAGAGC
GAACACTGTGTGTGCTGGGGCGTGAAAGCTGGAAGAGATAAGAGGATCGGGAGAGGAAAAAGCAC--TGCCTGGCCCCAC
CATGTGTAATGCCCGC--ATGCGTCCGGC---------------------------------------------------
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>chr2B_315
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----------------------------------------------------------------------------TGCA
ACTTTTGCTGTTGCCGGTCGTAGCTTTTTAGCTCGCCAGTAGAAGCTTTTAGCTCCGCCAGTTGCAACATCGGTGGACGC
CGCGCGTGGTCAGCATGGCCGCCCAATTGCAGCTTTCGCCGTTGCCGGTCGTAGCTTTTTTGCACGCTGGTAG-AAGCTT
TCGACACCGCCAGTTACAACATCGAGGAGTCGCCGGCATGGTCGCGCA--TGCCAGTTGAGCTTCCAGCTCCACCAGTCG
CACAACCTTGCAACTCTTCTCCTCGTCCC------GCATCGCAGAGTTGTCTCCACAGCACCGCTCTTCCTGCTCCAAAT
CTGCAGCGCCGCCACTCCTCT-ATTTTGCCGGTCGCAGCTCAGGACGGTCTTGGCCAGCAGCGAAAAAAAGAGGC-AATG
CCCTTGACTTGTGCTCCGGCGTGGAAAGGTGGAAGGGAAAAAGAAGATGGAGGAAGGAAGGGGAATGAGTGGAGGAGAGC
GAACACTGTGTGTGCTGGG-CGTGAAAGCTGGAACAGATAAGGGGATCGGGAGAGAAAAAAGCAC--TGCCTGGCCCCAC
CATGTCTAACGCCTGC--CTGCATCCGGC---------------------------------------------------
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>chr7B_1250
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-------------------------------------------------------------------------GGCCCGC
ACTGGTCAGCGCTCCGCTGCAACCTCACCGCCGGGATCCTGCACCCCACGCGCCTGGCTTCTCTCGCCCCGCTGCGGCAG
GAGGCCGCCCAGGCGCTCGTGGCGGAGTTCTCTGGCGCCAGCGGCCGTGACCGTGAGGTGACCC---TCCGCGGCCACAT
CACCGCTGCCGTGTTCCCGCTGGTGGCGCGCCTGTGCTTCGGCGATGGCGTCGACGGCGGCCACGTGCGCGCCATGGGGA
GCATGGTGCGGGATTTCCTAGCCGCCGCGGGGGAGCTCAACCGCAGATTCGACGGCTCCATGCTCTCCAAGATCGTGAAC
TGGAGGGCGCTTCGCCACGTCACCGGCTTGATCGAGCGGCAGGCCGAGCTGTACCGCCCGCTGATCGAGGCGAGGAGGCG
GTCACGATCTCCCCTCT------GCGGCGGCATTGTCCATCCTTACGTCGACTCACTCCTCGATCTCCGCGTACCCGATG
ATGATGCAGCCGCCGGCGACGGC---CAT--GGCCTGCGCGAGCTCCGAGACGGCGAGGTGGTAGGTCTCGTTCTAGAGT
TCCTTGCCGCGGGCATGGGCTCCGTGTCGGCCTGCGTCGAGTGGACCCTCGCCCACCTCATCGACCGGCTGGAGGTGCAG
GACAAGCTACGCCGTGAGATCGATGGCGCGGCTGACGCCACGCTT------------TCCAGCAAAACCCTTCGCACCGG
CATGCCGTACCTGAACGCCGTGGTGTTGGAGAGCCTCCGGATGCACCCGCCGATGCCGGTCCTCATGCGCGCCGCGCATG
GCGAGGGTGCCAAAGTAGTGCCTGTCACAAGGGCCACCA---------CCGTGCCGGCC---GAGGGCCTGAGGGTGATG
TTCAGCTTAGGCGACATCGGAAGAGATGGGAAGACGTGGACCGACCCTGACGAGTTCCTGCCAGAGCGATTCCTCCCCGG
AGGCGAGGCGGAGGACGTTGGCCCGATGCCGGGCCGGAAAGAGATCAGGATGATGCCGTTTGGCGCGGGACATAGGCACT
GCCCCGGCATGAGCATGGGGATGTTGCACATCAAGTGCTTCGTGGCGGCACTCGTGCGTGAGTTTGAATGGGCACCATCG
GCGGAG------GACCGCGGCGGCGGCATTGACATGACGGAGCTGGATGGGTTCTCCAAGCTGATGAAGAAGCCCCTTAC
CGCTTGCGTCACGCGACGTA------------------------------------------------------------
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>chr4D_1680
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-----------------------GCGGCGGCATCATCCGTCCTTACGTCGACACGCTCCTTGATCTCCGTGTCCCGGA--
-------------CAGCAATGGC---GCC--GGGC---GTCCTCTTCGAGACGGCGAGCTGGTGGGCCTCGTGTTCGAGT
TCCTTGGCACAGCCACGGGGTCAACCGCAGCCTGTCTCGAGTGGACCCTCGCCCACCTCATCGACCAGCCGGAGGTCCAG
GACAAGCTGCGGCGCGAGATCAATGCCGAGGCCGACGGCGGCGGGATGCTCTCAATCTCAAGCAAAAGCATCCGCAGCGG
CATGCCGTATCTGAATGCGGTGGTGCTGGAGAGCCTCCGCATGCACCCGCCGGTGCCGTTCATCATGCGCAGCGCCCACG
GCGAGGGCGCCACAGCAATCGGTG------GGGCGACCG---------CTGTGCCGGTG---GACGGCCTGAGCGTGCGG
TTCGATTTAGGTGGCATCGGGAGAGACGGGAAGTCGTGGACCGATCCCGACAAGTTCCGGCCGGAGCGGTTCCTTGCCGG
AGGCGAGGCGGAGGACGTCGGCCCGGCGCCAGGCCCGAAGGAGATAAGGATGATGCCGTTCGGTGCCGGGCACAGGCACT
GCCCCGGCGTGAACATGGGGATGCTGCACATCAAGTGCTTCCTGGCCGCGCTCCTGCACGGGTTCGACTGGGCGCC----
-----GGCGGGAGACTGCAGCGGCGGGGTCGACATGACGGAGCTGGACGGCTTCGTGAAGATAATGGAGCAGCCGCTTTC
CGCGCGTGTCACGCGACG--------------------------------------------------------------
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>chr2A_1681
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------------------------CGGCGGCGTCCGGCGTCCGTACGTCGACTCACTCATCGATGTCCGCGTCCCCA---
------------GTGACGACACGGGCGGTATGGAC---ATCCTCTTAGAGACGACGAGATGGTGAGCCTTGTGTCAGAGT
TCCTCGGCGGGGGCGCGGATACGATCGTGGCCATCATCGAATGGACGCTCGCTCACCTCGTCATCCAGCCAGAGGTCCAA
GGCAAGCTGCGTCGCGAGGTTGACGCCGTGGACACGGTCTCCGTCG---------------ACAAG---AGCCTCCGCAA
GATGCCGTACCTGCACGCGGTCGTGCTGGAGAGCCTCCGGATGCACCCATCGGTGCCGTTCGTCCCACGCCGAGTCCGCG
CCGAGGACGCTACGTTGCTG---G------GCGAAACCA---------CCGTGCCGACC---GGCGACTTCAACGTGCGG
TTTTTTGTGGGGGACATCGGGAGAGACAGGAAGACATGGACGGATCCCGACGAGTTCCAGCCTGAGCGGTTCCTGGCCGG
AGGCGAGGCGGAGGGCGTTGGGCCATCGGCAGGTCCCAAGGAGATGAAGATGATGCCGTTTGGTGCGGGGCATGGGTTCT
GCCCGGGCATGGGTCTGGCCATGGTGAACATCAAGTGCTTCTTGGCAACGCTCGTGCGTGAGTTCGAGTGGGCGCC----
-----GCCGGCGGAGGGCGGCGGCGGGGTCGACATGAATGACCCCAACGTGTTCTTCAAGGTGATGAAGAAGCCACTTTC
CACCCGTGT-----------------------------------------------------------------------
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>chr2B_1700
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-------------------------------------------TACGTGGACTCGCTGCTCGATCTCCGCGTTCCCG---
------------CCGACGACGGCGATGCC--CGGC---GCGCGCTCCGGGAGACCGAGCTGGTCGGGCTCTTGTTCGAGT
TCCTCGGCGCAGGCACAGGGTCGGTGGTGACCTGCGCCGAGTGGGCCCTCGCCCACCTCATCGACCAGCCGGAGGTCCAG
GACAAGCTGCGCCGCGAGATCAATGACGACGCAGATG---CCGGCG---------------GCAAGAGCCTGCGCACGGG
CATGCCGTACCTGAACGCCGTGGTGCTGGAGAGCCTCCGCATGCACCCACCGGTGCCGATCATCTTGCGAGCCGCCCACG
GCGAGGGCGCCAGGGCAGTT---G------GTGGCGCCGCCACCGTGTCCGTGCCAGCC---AGCGGCTTGAGAGTGATG
TTCAACCTAGGCCACATTGGACGAGACAGGAAGATGTGGGCCGACCCCGGCGAGTTCCGGCCAGAGCGGTTCCTTGCCGG
AGGGGAGGCGGAGGACGTCGGGCCGACGCCGGGGTCCAAGGAGATAAGGATGATGCCGTTCGGTGCGGGGAGCAGGCACT
GCCCTGGCGTGGGCATGGGGATGATGCTCATCAAGTGCTTCCTCGCCGCGCTTGTCCGCGAGTTCGAGTGGGCGCC----
-----G------GACTGCAGCGGCCGCGTCGACATGACGGAGCTCGACGGCTTCCTAAAGATGATGAAGAAGCCACTCTC
AGCGCGTGTCAAGCAAC---------------------------------------------------------------
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>chr2D_1751
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----------------------------------CGGCGCGCTCTTAGAGACGACGAGATGTGGAGCCTTGTGTCAGAGT
TCCTCGGCGGCGGCGCGGATACGATCGTGGCGATCATCGAATGGACACTCGCTCACCTCGTCATCCAGCCAGAGGTCCAA
AGCGAGCTGCGTCGCGAGGTTGACGCCGTGGACGCGGCCTC---CG---------------ACAAG---AGCCTCCGCAA
GATGCCGTACCTGCACGCGGTCGTGCTGGAGAGCCTCCGGATGCACCCGTCGGTGCCGTTCGTCCCACACCGAGTGCGGG
CCGAGGACGCTACGTTGCTG---G------GCGAAACCA---------CCGTACCGGCC---GGCGACTTCAACGTGCGG
TTTGTCGTGGGGGACATCGGGAGAGACAGCAAGGCGTGGACGGATCCTGACGAGTTCCAACCCGAGCGGTACCTGGCTGG
AGGCGAGGCGGAGGGCGTCGGGCCATCGGCAGGTCCCAAGGAGATGAAGATGATGCCGTTTGGTGCGGGGCATAGGTTCT
GCCCGGGCATGGGTATGGCCGTGGTGAACATCAAGTGCTTCTTGGCCGCGCTCGTGCGCGAGTTCGAGTGGGCGCC----
-----GCCGGTGGAGGGCGGCGGCGGGGTCGACATGACTGACCTCAACGTCTTCTTCAAGGTGATGAAGAAGCCACTTTC
CACCCGTGTCACACGACG--------------------------------------------------------------
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>SNPs
--------------------------------------------------------------------------------
---------------------S-----------------------------------S---------S------------
---S---------------------------------S--------S-----------SS--------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------S-----------------
-----------------------------------------------S------------S-----S-------------
--------------------------------------------------------------------------------
--------------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-
-----SSS-------------------S-----SSS----S-----SS-S---S-S-----S--S--S-------S----
--------------S-----S--S-SSS-S-SS-S-SSSSS-SSSS-S--SSSS-S-SSSSSSSSSS----S---S--S-
S-S-SSS--S-S----S-S---S-------SS-------------S-----------SSS-SS----SSSS------S-S
--SS-S---S----S-S--S---S---SS----------S--S-SSSS-S--------SSS---SS--S--S--S--S--
S-----SS---SSS----S---SS---SSSS---SSS-----SSSSS-S------SS--S--S-----S--SS-------
SS-SSS-----S-S---SSSSSS------------S-S----------------------------------S-------
-------------------S-------------------S--------------------S---S-------S-------
--------------S----------------------S-----------S---------------S-S------------
---------------------------S----------S----S-------------S---S------------------
---------------------------S--------S------------S---S---------S--------SS------
-S--S--S---S-------------------------------------S-----S-S-SSS----------S-----S-
-----------------------S-----------------------------------S--------------------
------------------S--------------S---------S--------S-----------SSS-------------
---------S----S-S-----------SS----------------------------S---------------SSSSSS
-SSSSS-S-S-SSS--SS-----S--S-----------------------------------------------------
---S-------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_947
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TCCATCGCCACTGCTTAGTG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>reverse_2662
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TCCAGCGCGTAAGTCAAAGT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
