>input_sequence_51562
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---CTATAAATTGAAGGTTTGTTTTGGATTTTTTCCAAAAGAAAAACAAGGTCAGCACCCTCCGACAGGAGGTACCGGGC
ACGTAATCGACGTGCGCAGTTTTGCATCGGGAACGCAAAGATGACTGTGTCTTCTGTATTCGGTCGTGCAGTCAAAATCC
TGCGTTAGATCTCCTGGACATTACATGAGCAAAAATGCTACACGTACAGACACATTGTACAGGTTTTTACAGGTTGAGGA
CTGCGCGCTCTTCTAATTGACCCTCGCTTAATTTTCATCGGTGAGCCCGTGCGTCTTAATCAATCCACGGCCAATCAATG
TTAAGCAACCTGTAAAACCCCGTATAACTCCGTACGTCTAGCATACATCAGCGTGCCCGACTTCGCTAGGAAGTTGACTC
AGAGCTTCCTAGAATAAAGAGACAAAATATTACTCCAGTTGAGCCTTGAACACTCTGCGTGCACCAGTTTGACCCCAGCT
GCATGCATCCCTTCCCTTCCCTGGACGCTGAACCGAAACCGACTGTACTGCTGTCTCTGGCT----CAGTCTTCGTCCGC
TTCTTCCACCCCTTCCTCGGCGCGGCGCTGCTTCACAAATCTCGCGTTCGTCCCACTCTCTTTCTTTGCCTTCGTTGGGT
GCCACCGATCTCATCTGCTTCGCCTTCGAGGCCACTCACGA-CTATGGCCCCAATTCGCCGCAACAGGCGGCAGACACAA
GGGAAGGAGGCCCAGTCGGGCTTTGAGGCGCCGTCTCTGCGCGGCGGCAATGTGCCGACCGGCGAGTTCGGCACCTGTCC
CCAGCCGGATCGCACCGTGCACTTTCCCAGGCCCAAGGGGATCGGGCCTGTCGGCGAGTCCAGCTCCAGCAAGCACCGCT
CGCCGCCGCAGGAAGAGGACGTCGAGATGGCGGCCTGGCAGCAGGCGGACCGTCAGCGGCGGAAGTGGAGCGAGTCAACG
GCGGGAGGCGAGCAGGCGAGAGCGCCGCGGCGATGGGCGGCGAGGTACTCGACGTTTCTCATGAAGGACACGCCGTGGCA
CGCGGGAGGGGTCCTCCTCCTCCAGCCCGGTGACAACCCTCGCCTCATCCTTAAGGACAACCGCGGCGTCACCATCGATG
CGCGACTCCTTCGTGATGGCGAATCCGTGTCCTTTGATGACACCATCCTGTTCCCATGCCACCGGGCTATCGTCGGCCAC
GCCCAGGGAGAAGGTGACTCCCGGGTTTGAGTTCGTGGATCTGCGACTGATTGTTCGTACTGCGTCGCTGACGAGGGGAG
GCGCGAACAGGGCCGTGTTTTGAAAATTGGTTTATGAGCCCGGGCTCAAATGTACCGTTATCTTTTCTTGCATCAAATTT
AGAGTTTTTTTATTACTCTATCCAGTTTATATTAATTGTCGCTCAAACAGATGTATGTAGTACTGAAATACATTTAATAT
GGGTTGA-------------------------------------------------------------------------
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>chr5A_1_TraesCS5A01G085400
GTTGAACTTTGAAAACATTTTTTAGGGGCAAACAATTATTGAAAACGTATTTATTTATGAAATCTTTGGACATTCTATAA
AGTGTGATAACTTTTTGAAAATTTCAAACACTTTT-AAAAAATCAACAACTTTGAAAAAG----CACCTTTATAAACA-T
TTTTTGAAACCTGAACAAAATTTTAAAGTGCAAACACTTTTTGAAACATTA--ATTTTTTCTGCAACCTGAACAAAATTT
TAAAGTGCGTGCACTTTTTGATACATAAACATTTTCTGAAACCTGAAAATATTTTGTGACATCTAAAACATATCACAAGT
TTTAAAAATTGTACGGGCCAATCCAAATGTTTATACAATGTATAATAATATTTGTGTGATTCAAAAAAA-TGTTT----T
ATACATTCAAAAAAATGTAACATTTCAAGAATGTTCACGAGTTCCAAAAAATGTGTTTTTGACATTTTCAAAAGGATGTG
TCTACAATGTA-AAA-AAA-TGTTTGTGTGATGTAAAAAAATGTGTCATAACCTGAACAGAATATATGTGGCATGTCCTT
GCAAAAAGCGTATGCAAATATAAAAATGTTGAACCATGTAAAAGAGTGTTCGTGTAGTTTTATAAAAAA--TATTGTCAT
TAAGAAAATGTAAAACATGTAATTGG-AAAAATATTACCATGTGTTCAAAAAGTTTTGAAAACATTTAATTTATAAATGT
ACATAATGTATTTGAAAATATCAAAAATTTATCTAAGAATATTTAATGTGTGTGTTAAAAATGTACATTGGGTACTGAGA
AAAAATAGACATGTGT-GA-AAATGAA-----AAA-GAAAAGAAA-C-----GAAAAAGGAAGAAACTAAG-AAAAA-CC
AGAATAGTGTGCGCGCGC----GAGCAACTGCGCTACTA----GGCCGGCCCAATTCAGCAAATCTCAGCCATGTCCCGT
CAAGGTTTAAAATAGACCGGGATTAAAGAGTTTGGTATGCTGATTTCAGAGATTAAGAGTTTGAGATTTGATTTAGCTTT
CACCTATAAATTGAAGGTTTGTTTTGGATTTTTTCCAAAAGAAAAACAAGGTCAGCACCCTCCGACAGGAGGTACCGGGC
ACGTAATCGACGTGCGCAGTTTTGCATCGGGAACGCAAAGATGACTGTGTCTTCTGTATTCGGTCGTGCAGTCAAAATCC
TGCGTTAGATCTCCTGGACATTACATGAGCAAAAATGCTACACGTACAGACACATTGTACAGGTTTTTACAGGTTGAGGA
CTGCGCGCTCTTCTAATTGACCCTCGCTTAATTTTCATCGGTGAGCCCGTGCGTCTTAATCAATCCACGGCCAATCAATG
TTAAGCAACCTGTAAAACCCCGTATAACTCCGTACGTCTAGCATACATCAGCGTGCCCGACTTCGCTAGGAAGTTGACTC
AGAGCTTCCTAGAATAAAGAGACAAAATATTACTCCAGTTGAGCCTTGAACACTCTGCGTGCACCAGTTTGACCCCAGCT
GCATGCATCCCTTCCCTTCCCTGGACGCTGAACCGAAACCGACTGTACTGCTGTCTCTGGCT----CAGTCTTCGTCCGC
TTCTTCCACCCCTTCCTCGGCGCGGCGCTGCTTCACAAATCTCGCGTTCGTCCCACTCTCTTTCTTTGCCTTCGTTGGGT
GCCACCGATCTCATCTGCTTCGCCTTCGAGGCCACTCACGA-CTATGGCCCCAATTCGCCGCAACAGGCGGCAGACACAA
GGGAAGGAGGCCCAGTCGGGCTTTGAGGCGCCGTCTCTGCGCGGCGGCAATGTGCCGACCGGCGAGTTCGGCACCTGTCC
CCAGCCGGATCGCACCGTGCACTTTCCCAGGCCCAAGGGGATCGGGCCTGTCGGCGAGTCCAGCTCCAGCAAGCACCGCT
CGCCGCCGCAGGAAGAGGACGTCGAGATGGCGGCCTGGCAGCAGGCGGACCGTCAGCGGCGGAAGTGGAGCGAGTCAACG
GCGGGAGGCGAGCAGGCGAGAGCGCCGCGGCGATGGGCGGCGAGGTACTCGACGTTTCTCATGAAGGACACGCCGTGGCA
CGCGGGAGGGGTCCTCCTCCTCCAGCCCGGTGACAACCCTCGCCTCATCCTTAAGGACAACCGCGGCGTCACCATCGATG
CGCGACTCCTTCGTGATGGCGAATCCGTGTCCTTTGATGACACCATCCTGTTCCCATGCCACCGGGCTATCGTCGGCCAC
GCCCAGGGAGAAGGTGACTCCCGGGTTTGAGTTCGTGGATCTGCGACTGATTGTTCGTACTGCGTCGCTGACGAGGGGAG
GCGCGAACAGGGCCGTGTTTTGAAAATTGGTTTATGAGCCCGGGCTCAAATGTACCGTTATCTTTTCTTGCATCAAATTT
AGAGTTTTTTTATTACTCTATCCAGTTTATATTAATTGTCGCTCAAACAGATGTATGTAGTACTGAAATACATTTAATAT
GGGTTGAAGAAAATACTTAATAGCA---ATATGGTTACAATCAGCCAAAAGGCTGTCAACAAGGAAATCACGGCGGGGGA
AGACTTAGACATTTTTGAAGTAGTTAGCTGGGAATTGAGAAACTCCTCAATTTTCTGCAATCTTAAGTTGAGAAGTAATC
AAGTGGGGTTTAGAGTGATTACAGTTTATGGATATGCATATGAGGGGGCCAAAGAGGACTTTCTCTCTGAGCTTCACTCT
GTGTTTTTA-----------------------------------------------------------------------
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---GATTCTAGTACATCCACCCTAATTGGAGGGGATTTTAACCTAGTTAGATACAATAGTGATAAGAGTAATGGAAATAC
TAACCAGAGATGGGCAGATAATTTTAATGCCTGGATTGAGATTTGGAGTTTGTTAGAAATTAAATTTTCCTCCAGAAAAT
ACATTTGGGCAAACAACTAAGCTGACATGATTATGTCTACAATAGATAGAATGTTTTGCAACACTGAGCTAGATGGCATT
TTCCCACTTGCATTTAGCAGTGCTCGCCCCAGATTGGGTAGTAATCATATCCCAATTATTTGGGATTCAGTGATGAATAA
ACAAGCTAAACCTAGTAGTTTTAAATTTGAGAGATGGTGGCTCCTTAGAGAGGACTTCAAAACTCTGGTGGTAGATATTT
GGAATGCACCAGTCTCTGGAAT-ACCTCAATAGATGTGTGGCAAGAGAAAGTTAGGAGATTTATTAGGAAAACCACCAAG
GGGTGGAGTGCCAACATTGAGGCAGATCTAAGAAGAAACAAAAATAAGCTTATGGAAGATTATGATAAATTAGATGTTTT
AGCTGAGAATAGGGAGCTCGGTGAGCAGGAGCAAGATAGTATGAGAGCTATACACCTAGAACTCCAAAGACACTGGTTGA
AGGAGGAGGTGAAAGCTAAACAAAGATCCAAATATAGAGACATTAAGGAGGGAGATAGGAACACTGAATATTTTCATGCA
GTAGCTAACCAGAGGAGGAGGAAGGTCTATATCCACTCACTGGAA
>chr1B_1
GTCGAACTTTGTAAAAATTTTGTAGGGGCAAACAATTATTGAAAACATATTTATTTATGAAATCTTTGAACATTTTATAA
AGTGCGAGAACTTTTTGAAAATGTCGAATACTTTT-AAAAAACTAACAACTTTGAAAAAGCGAACACCTTTATAAATA-T
TTTTTGAAACCTGAACAAAATTTAAAAGTGCAAACACTTTTTGAAACATTA--ATTTTTTCTGCAACCTGAACAAAATTT
TAAAGTACGGACACGTTTTGATACATAAACATTTTCTGAAACCTGGAAATATTTTGTGACATCTAAAAAATATCTCAAGT
TTTATAAAATGTACCGGCCAATCCAAATGTTTATACAATGTATAATAATATTCGTGTGATTCAAAAA-A-TGTTT----T
ATACATTCAAAAAAATGTAACATTTCAAGAATGATCACGAGTTCAAAAAATTGTGTTTGTGACATTTTTAAAAGAATGTG
TTTACAATGTA-AAA-AAA-TGTTTGCGTGATGTAAAAAAATGTGTCATAACCTTAACAGAATATATGTGGCATGTCGTT
GAAAAAAGTGTATGCAAATTTAAAAATGTTGAACCATGTAAA-GAGTGTT-GTGTAGTTTTATAAAATGTTTATTATCAT
TAAGAAAATGTAAAACATGTAGTTGAAAAAAATATTACCATGTAATCAAAAAGTTTTGAAAACATGTAATTTATAAATGT
ACATAATGTATTTGAAAATATCAAAAGTTTATCCAAAAATATTTAATGCGTGTGTTAAAAATGTACATTGGGTACTGAGA
AAAATTAGACATGTGT-AA-AAATGAA-----AAA-GAAAAGAAAAC-----AAAAAAGGAAGAAACTAAG--AAAAACC
AGATTA--GTGCGCGCGCGC--GAGCAACT-CGCTTCTG----GGCCGGCCTAATTTAGCAAATCCCGACTATGTTCTGT
CAAGGTTTAAAATAGGCCGGGATTAGAGAGTTTGGCGTGCTGATTTCAGGGATTGAGAGTTTGGGGTTTGATTTAGCTTT
CGCCTATAAATTGAAGGTTTGTTTTGGACTTTTTTCC-------------------------------------------
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---------------------------------------------
>chr4D_1
GTCGAACTTTGAAAACA-TTTTTAGGGGCAAACAATTATTGATAACGTATTTATTTATGAAATCTTTGAACATTATGTAA
AGTGCGAGAACTTTTTGAAAATTTTGAATACTTTT-AAAAAACCAACAACTTTGAAAAAGCGAACACCTTTATAAACA-T
TTTTTGAAACCTGAACAAAATTTTATAGGGCAAACACTTTTTGAAACATAA--ATTTTTTCTGCAACCAGAATAAAATTT
TAAATTGCGGACACGTTTTGATACATAAACATTTTCTGAAACCTGAAAATATTTTGTGACATCGAAAAAATATCACAAGT
TTTAAAAAATGTACGGGCCAATCCAAATGTTTATACAATGTATAATGATAGTTGTGTGATTCAAAAAAA-TGTTT----T
-TAAATT-CAAAAAAAGTAACCTTTCAAGAATGATCACGAGTTCCAAAAAATGTGTTTGTGACATTTTTAAAAGAATGTG
TTTACAATGTA-AAA-AAA-TGTGTGTGTGATGTAAAAAAATGTGTCTTAACCTTAACAGAATATATGTGGCATGTCCTT
GAAAAAAGTGTATGCAAATTTAAAAATGTTGAACCACGTAAAAGAGTGTT-GTGTAGTTTTATAAATTGTTTGTTGTCAT
TAAGAAAATGTAAAACATGTAGTTGAAAAAA-TATTACCATGTAGTCAAAAAGTTTTGAAAACATGTAATTTATAAATGT
ACATAATTTATTTGAAAATATCAAAAGTTTATCCAAAAATATTTAATGTGTGTTTTAAAAATGTACATTGGGTACCGAGA
AAAATTAGACATGTGC-AA-AAATGAA-----AAAAGAAATGAAAAC-----GAAAAAGGAAGAAACTAAG-AAAAAACC
AGATTA--GTGCGCGCGCGC--GAGCAATGGTGCTACTG----GGCCGGCCCAATTCAGCAAATCCGGACTATATTCTGT
CAAGGTTTAAAATAGACCGGGATTAAAGAGTTTAGTGTGCTGATTTCAGGGATTAAGAGTTTGGGGTTTGATTTAGCTTT
CGCCTATAAATTGAAGGTTTGTTTTGGACTTTTTCC--------------------------------------------
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---------------------------------------------
>chr2D_1
GTCGAACTTTGAAAACA-TTTTTAGGGGCAAACAATTATTGATAGCGTATTTATTTATGAAATCTTTGAACATTTTATAA
AGTGCGAGAACTTTTTGAAAATTTCGAATACTTTTAAAAAAACCAACAACTTTGAAAAAGCGAACACCTTTCTAAACA-T
TTTTTGAAACCTGAACAAAATTTTAAAGTGCAAACACTTTTTGAAACATA-TTTTTTTTTTTGCAACCTGAACAAAATTT
TAAAGTGCGGACACGTTTTGATACATAAACATTTTCTGAAACCTGAAAATATTTTGTGACATCTAAAAAATATCACAAGT
TTTAAAAAATGTACGGGCCAATCCAAATGTTTGTACAATGTATAATAATATTTGTGTGATTCAAAAAAA-TGTTT----T
-TAAATT-AAAAAAATGTAACATTTCAAGAATGATCATGAGTTCCAAAAAATGTGTTTGTGATATTTTTAAAAGAATGTG
TTTAGAATGTA-AAA-AAAATGTTTGTGTGATGT-AAAAAATGTGTCTTAACCTTAACAGAATATATGTGGCATGTCCTT
GAAAAAAATGTATGCAAATTTAAAAATGTTGAACCACGTAAAAGAGTGTT-GTGTAATTTTATAAATTGTTTATTGTCAT
TAAGAAAATGTAAAACGTGTAGTTGAAAAAA-TATTACCATGTATTCAAAAAGTTTTGAAAACATGTAATTTATAAATGT
ACATAATTTATTTGAAAATATCAAAAGTTTATCCAAAAATATTTAATGTGTGCGTTAAAAATGTACATTGGGTATTGAGA
AAAATTAGACATGTGT-AA-AAATGAA-----AAAAGAAA-----AGAAAAAGAAAAAGGAGGAAACTAAG-AAAAAACC
AGATTA--GTGCGCGCGCGCATGAGCAACTGTGCTACTG----GGCGGCCCCAATTCAGCAAATCCCGGCTATGTTCTGT
CAAGGTTTAAAATAGACCGGGATTAAAGAGTTTAGTGTGCTGATTTCAGGAATTGAGAGTTCGGGGTTTGATTTAGCTTT
CGCCTAAAAATTGAAGGTTTGTTTTGGACTTTTTCC--------------------------------------------
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>chr3D_1
GTTGTACTTTGTAAACATTTTTTAGGGGCAAACAATTATTGATAATGTATTTATTTATGAAATCTTTGAACATTTTATAA
AGTGCGAGAACTTTTTGAAAAATTCGAATACTTTTAAAAAA-CCAATAACTTTGAAAAAGCGAACACCTTTATAAACA-T
TTTTTGAAACCTGAACAAAATTTTAAAGTGCAAACACTTATTGAAACATAA--ATTTTTTCTGCAACCTGAACAAAATTT
TAAAGTGCGGACACGTTTTGATACATAAACATTTTCTGAAACCTGAAAATATTTTGTGACATCTAAAAAATATCACAAGT
TTTAAAAAATGTATGGGCCAATCCAAATGTTTATACAATGTGTAATAATATTTGTGTGATTATAAAAA------TGTTTT
-TAAATT-CAAAAAATGTAACATTTCAAGAATGATCACGAGTTCCAAAAAATGTGTTTGTGACATTTTTAAAAGAATGTG
TTTACAATGTA-AAATAAA-TGTTTGCGTGATGTAAAAAAATGTGTCTTAACCTTAACAGAATATATTTGGCATGTCCTT
GAAAAAAGTGTATGCAAATTTTAAAATGTTGAACCACATAAAAGAGTGTT-GTGTAGTTTTATAAATTGTTTATTGTCAT
TAAGAAAATGTAAAACATGTAGTTGAAAAAA-TATTACCATGTATTAATTTTTTTTTGAAAACATGTAATTTATAAATGT
ACAAAATTTATTTGAAAATATCAAAAGTTTATCCAAAAATATTTAATGTGTGCGTT-AAAATGTACATTGGGTACTGAGA
AAAATTAGACATGTGT-AA-AAATGAATAAAGAAAAGAAA-----AC-----GAAAAAATAAGAAACTAAGAAAAAA-CC
AGATTATTGCGCGCGCGC----GAGCAACTGCGCTACTG----GGCCGGCCCAATTCAGCAAATCCCGGCTATGTTCTGT
CAAGGTTTAAAATAGACCGGGATTAAAGAGTTTAGTGTGCTGATTTCAGGGATTGAGAGTTCGGGGTTTGATTTGACTTT
CGCCTATAAATTGAAGGTTTGTTTTGAACTTTTTCC--------------------------------------------
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>chr5D_4
---GAACTTTGAAAACATTTTTTAGGGGCAAACAATTATTGATAACGTATTTATTTATGAAATCTTTGAACATTATGTAA
AGTGCGAAAACTTTTTGAAAATTTTGAATACTTTTAAAAAA-CCAACAACTTTGGAAAAGCGAACACCTTCATAAACA-T
TTTTTGAAACCTGAACAAAATTTTATAGGGCAAACACTTTTTGAAACATAA--ATTTTTTCTGCAACCAGAATAAAATTT
TAAAGTGCGGACACGTTTTGATACATAAACATTTTCTAATACCTGAAAATATTTTGTGACATCTAAAAAATATCACAAGT
TTTAAAAAATGTACGGGCCAATCCAAATGTTTATACAATGTATAATAATATTTGTGTGATTCAAAAAAA-TGTTT----T
-TAAATTCAAAAAAATGTAACTTTTCAAGAATGATCACGAGTTCCAAAAAATGTGTTTGTGACATTTTTAAAAGAATGCG
TTGACAATGTA-AAA-AAA-TGTGTGAGTGATGTAAAAAAATGTGTCTTAACCTTAACAGAATATATGTGGCTTGTCCTT
GAAAAAAGTGTATGCAAATTTTAAAATGTTGAACCACGTAAAAGAGTGTT-GTGTAGTTTTATAAATTGTTTGTTGTCAT
TAAGAAAATGTAAAACATGTAGTTGAAAAAA-TATTACCATGTATTCAAAAAGTTTTGAAAACATGTAATTTATAAACGT
ACATAATTTATTTGAAAATATCAAAAGTTTATCCAAAAATATTTAATGTGTGCGTTAAAAATGTACATTGGGTACTGAGA
AAAATTAGACATGTGC-AA-AAATGAA-----AAAAGAAA-----AC-----GAAAAAGGAAGAAACTAAG-AAAAAACC
AGATTA--GTGCGCGCGC----GAGCAACTGCGCTACTG----GGCCGGCCCAATTCAGCAAATCCCGGCTATATTCTGT
CAAGGTTTAAAATAGACCGGGATTAAAGAGTTTAGTGTGCTGATTTCAGGGATTGAGAGTTCGGGGTTTGATTTAGCTTT
CGCCTACAAATTGAAGGTTTGTTTTGGACTTTTTCCAAGAGCAAAACA--------------------------------
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>chr2B_4
---GAACTTTGAAAACATCTTTTAGGGGTAAACAATTATTGAAAACGTATTTATTTATGAAATCTTTGAACATTTTATAA
AGTGCGAAAACTTTTTGAGAATTTTGAATACTTTT-AAAAAACCAACAACTTTGAAAAAGCGAACACCTTTATAAACA-T
TTTTTGAAACCTGGGCAAAAATTTAAAGAGCAAACAATTTTTGAAACATAATTTTTTTTTCTGCAACCTGAACCAAATTT
TAAAGTGCGGACACGTTTTGATACATAAACATTTTGTGAAACCTGAAAATATTTTGTGACATCTAAAAAAGATCACAAGT
TTTAAAAAATGTACGGGCCAATCCAAATGTTTATACAATGTATAATAATATTTGTGTGATTCAAAAAAAATGTTT----T
ATTCATTCAAAAAAATGTAACATTTCAAGAATGATCACGAGTTCCAAAAATTGTGTTTGTGACATTTTTAAAAGAATGTG
TTTACAATGTA-AAA-AAA-TGTTTGCGTTATGTAAAAAAATGTGTCATAACCTTAACAGAATATATGTGGCATGTCCTT
GAAAAAAGTGTATGCAAGTTTAAAAATGTTGAACCATGTAAAAGAGTGTT-GTGTAGTTTTATAAAAAAATTATTGTCAT
TAAGAAAATGTAAAACATGTAGTTGAAAAAA-TATTACCATGTATTCAAAAAGTTTTGAAAACATGTAATTTATAAATGT
ACATAATGTATTTGAAAATATCAAAAGTTTATCCAAAAATATTTAATGTGTGTGTTAAAAATGTACATTGGGTACTGAGA
AAAATTAGACATGTGT-AA-AGATGAAAAATGAAAAGAAA-----AC-----AAAAAAGGAAGAAACTAAG-AAAAA-CC
AGATTAGTGCGCGCGCCC----GAGCAACTGCGCTACTG----GGCCGGCCCAATTCAGCAAATCCCGACTATGTTCTGT
CAAGGTTTAAAATAGACCGGGATTAGAGAGTTTGGTGTGCTGATTTCAGGGATTGAGAGTTGGGGGTTTGATTTAGCTTT
TACCTACAAATTGAAGGTTTGTTTTGGACTTTTTCCCAAA----------------------------------------
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>chr2B_4
---GAACTTTGAAAACATTTTTTAGGGGCAAACAATTATTGGAAACGTATTTATTTATGAAATCTTTGAACATTTTATAA
AGTGCGAGAACTTTTTGAAAATTTCAAGTACCTTTAAAAAA-CCAACAACTTTGAAAAAGCGAACACCTTTATAAACA-T
TTTTTGAAACCTGAACAAAATTTTAAAGTGCAAACACTTTTTGAAACATAA--ATTTTTTCTGCAACCTGAACAAAATTT
TAAAGTGCGGACACGTTTTGATACATAAACATTTTCTGAAACCTGAAAATATTTTGTGACATCTAAAAAATATCACAAAT
TTTAAAAAATGTACTGGCCAATCCAAATGTTTATACAATGTATAATACTATTTGTGTGATTCAAAAAAA-TGTTT----T
ATACATTCAAAAAGATGTAACACTTCAAGAATGATCGCGAGTTTCAAAAATTGTGTTTGTGACATTTTTAAAAGAATGTG
TTTACAATGCA-AAA-AAA-TGCTTGTGTGATGTAAAAAAATGTGTCATAACCTTAACAGAATATATGTGGAATGTCCTT
GAAAAAAGTGTATGCAAATTTAAGAATGTCGAACCATGTAAAAGAGTGTT-GTGTAATTTTATAAAAAAATTATTGTCAT
TAAGAAAATGTAAAACATGTAGTTGAAAAAA-TATTACCATGTCTTCAAAAAGTTTTGAAAACATGTAATTTATAAATGT
ACATAATGTATTTGAAAATATCAAAAGTTTATCCAAAAATATTTAATGTCTGCGTTAAAAATGTACATTGGGTATTGAGA
AAAATTAGACATGTGT-AAGA-ATGAAAAAAGAAAAGAAA-----AC-----GAAAAAGGAAGAAACTAAG-AAAAA-CC
AGATTAGTGCGCGCGCCC----GAGCAACTGCGCTACTGGGCCGGCCGGCCCAATTCAGCAAATCCCGACTATGTTCTGT
CAAGGTTTAAAATAGACCGGGATTAGAGAATTTGGTGTGCTGATTTCTGGGATTAAAAGTTCAGGGTTTGATTTAGCATT
CGCCTACAAATTGAAGGTTTGTTTTGGACTTTTTCCTCAAAAAAAA----------------------------------
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>chr7B_4
---GAACTTTTAAAACATCTTTTAGGGGCAAACAACTATTGAAAATGTATTTATTTATGAAATCTTTGAACATTTTATAA
AGTGCGAGAACTTTTTGAGAATTTCGAATACTTTTAAAAAA-CCAACAACTTTGAAAAAGCGAACACCTTTATAAACA-T
TTTT-GAAACCTAAACAAAATTTTAAAGTGCAAACACTTTTTGAAACATAA--ATTTTTTCTACAACCTGAACAAAATTT
TAAAGTGCGGACACGTTTTGATACATAAAAATTTTCTGAAACCTGAAAATATTTTGTGAGATCTAAAAAATATCACAAGT
TTTAAAAAATGTACGGGCCAATCCAAATGTTTATACAATGTATAATTATATTTGTATGATTAAAAAAA------T----T
ATACATTCAAAAAAATGTAACATTTCAAGAATGATCTCGAGTTCCAAAAATTGTGTTTGTGACATTTTTAAAAGAATGTG
TTTACAATGTA-AAA-AAA-TGTTTGCGTGATGTAAAAAAATGTGTCATAACCTTAACAGAATATATGTGGCATGTCCTT
GAAAAAAGTGTATGCAAGTTTAAAAATGT-GAACCATGTAAAAGAGTGGT-GTGTAGTTTTATAAAATGTTTATTGTCAT
TAAGAAATTGTAAAACATGTAGTTGAAAAAA-TATTACGATGTATTCAAAAAGTTTTGAAAACATGTAATTTATAAATGT
ACATAATGTATTTGAAAATATCAAAAGTTTATCC-AAAATATTTAATGTGTGCGTTAA-AATGTACATTAGGTACTGAGA
AAAATTAGACATGTGT-AA-A-ATGAAAAAAGAAAAGAAA-----GC-----GAAAAAGGAAGAAACTTAG-AAAAA-CC
AGATTAGTGCGCGCGCCC----GAGCAACTGCGCTACTG----GGCCGGCCCAATTCAGCAAATCCCGTCTATGTTCTGT
CAAGGTTTAAAATTAATCGGGATTAAAGAGTTTGGTGTGCTGATTTCAGGGATTGAGAGTTGGAGGTTTGATTTAGCTTT
CACCTATAAATTGAAGGTTTGTTTTGAACTTTTTCC--------------------------------------------
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>chrUn_4
---GAACTTTGAAAACATTTTTTAGGGGCAAACAATTATTGATAGCGTATTTATTTATGAAATCTTTGAACATTTTATAC
AGTGCGAGAACTTTTTGAAAATTTCGAATACTTTTAAAAAA-CCAACTACTTTGAAAAAGCGAACACCTTTCTAAAATTT
TTTT-GAAACCTGAACAAAATTTTAAAGTGCAAACACTTTTTGAAATATAA--TTTTTTTTTGCAACCTGAACAAAATTT
TAAAGTGCGGACACGTTTTGATACATAAACATTTTCTGAAACCTGAAAATATTTTGTGACATCTAAAAAATATCACAAGT
TTTAAAAAATGTACGGGCCAATCCAAATGTTTATAAAATGTATAATAATATTTGTGTGATTCAAAAAAA-TGTTT----T
-TAAATT-CAAAAAATGTAATATTTCAAGAATGATCATGAGTTCCAAAAAATGTGTTTGTGATATTTTTAAAAGAATGTG
TTTACAATGTAAAAA-AAA-TGTTTGTGTGATGTAAAAAAATGTGTCTTAACCTTAACAGAATATATGTGGCATGTCCTT
GAAAAAAATGTATGCAAATTTAAAAATGTTGAACCACGT-AAAGAGTGTT-GTGTAATTTTATAAATTGTTTATTGTCTT
TAAGAAAATGTAAAACGTGTAGTTGAAAAAA-TATTACCATGTATTCAAAAAGTTTTGAAAACATGTAATTTATAAATGT
ACATAATTTATTTGAAAATATCAAAAGTTTATACAAAAATATTTAATGTGTGCGTTAAAAATGTACATTGGGTATTGAAA
AAAATTAGACATGTGTAAA-A-ATGAAAAAAGAAAAGAAA-----AC-----GAAAAAGGAAGAAACTAAGAAAAAA-CC
AGATTAGTGCGCGCGCGC----GAGCAACTGCGCTACTGGGC----GGCCCCAATTCAGCAAATCCCGGCTATGTTCTAT
CAAGGTTTAAAATAGACCGGGATTAAAGTGTTTAGTGTGCTGATTTCAGGGATTGAGAGTTCGGGGTTTGATTTAGCTTT
CGCCTAAAAATTGAAGGTTTGTTTTGGACTTTTTCC--------------------------------------------
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>chr5D_1361
--------------------------------------------------------------------------------
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-------------------------------------------TACACCAGCGTGCCCGAGTTCGCTAGGAAGTTGACTC
AGAGCTTCCTAGAATAAAGAGACAAAAACTCACTCCAGTTGAGCCTTGAACGCTCTGCATGCACTAGTTTGACCCCAGCT
GCATGCATCCCTTCCCT-----GGACGCTGAACCGAAACCGACTGTTCTGCTGTCGCTGGCTCTCGCAGTCTTCGTCCGC
TTCTTCCACCCCTTCCTCGGCGCGGCGCTGCTTCACAGATCTCGCGTTCGTCCC---CTCTTTATTTGCCTTCGTTGGGT
GCCACCGATCTCATCTGCTTCGCCTTCGACGCCACTCACGA-CTATGGCCCCAATTCGCCGCAACAGGCGACAGGCGCAA
GGGAAGGAGGCCCAGTCGGGCTTTGAGGCGCCGTCTCTGCTCGGCGGCAATGCGCCGACCGGCGAGCTCGGCTCCTGTCC
CCAGCCGGAGTGCACCGTGCACTTGCCAAGGCCCAGGGGAAACGGGCCTGCCGGCGAGTCCAGCTCCAGCAAGCACCGCT
CGCCGCCACGGGAAGAGGACGTCGAGATGGCGGCCTGGCAGCAGACGGACCGTCAGCGGCGGAAGTGGAGCGAGACGGCC
GCGGGAGGCGAGCAAGCGAGGGCGCCGCGGCGATGGGCGGCGAGGTACTCGACGTTTCTCATGAAGGACACGCCGTGGCA
CGAGGGAGGGGTCCTTCTACTCCTGCCCGGTGACAACCCTCACCTCGTCCTCAAGGACGACCGCGGCGTCACCAT-GATG
CGCGGCTCCTTCGCGACGGCGAATCCGTGTCCTTTGATGACACCATCCTGTTCCCATGCCAGCGGGCTATCGTCGGCCAC
GCCCAGGGAGAAGGTGACTCCCGGGTTTGAGTTCGTGGATCTGCGACTGATTGTTCGTCCGGCGTCGCCGACGAGGGGAG
GCGCGAACAGGGTCCTGTTTTGAAAATTGGTTTATGAGCCAGGGCTCACATGTACCGTTATCTTTTCTTGCATCAAATTT
AGAGAA-TTTTATTACTGTTTCCAGTTTATATTAATTGTTGCTCAAACGGATATATGTAGTATTAAAATACATTTAATAT
GGGTCGAAGAAAATACTTGATAATGAT-ATATGGTTACAATGAGGCAAAAGGCTGTCAACAAGGAAATCACTGCGGGGGT
AGACTTAGACATTTTTTAAGTAGTTAGCTGGGAATTGAGAAGCTCCTCAATTTCCTGCAATCTTAAGTTGAGAAGTAACC
AAGTGGGGTTTAGAGTGATTACAGTTTATGGATTTGCATATGAGGGGGGCAAAGAGGACTTTCTCTCTGAGCTTCACTCT
GTGTTTTTA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
---GATTCTAGTACACCCAGCCTGATTGGAGGGGATTTTAACCTAGTTAGATACAGTAGTAATAAGAGTAATGAAAATAT
GAACTACATATGGGCAGATAATTTGAATGCCTGGGTTGAGATTTGGAGTTTGTTAGAAATTAAACTTTTTTCCAAAAAAT
ACATTTGGGCAAACAACCAGGCTGACATGATTATGTCTACAATAGATAGAATATTTTGCAACACTAAGCTAGATGGCATT
TTTCCACTTGCATCTAGCAGTGCTCTCCCTAGATTGGGTAGTGATTATATCCCAATTATTTGGGATTCAGGGATGAATAA
ACAAGCTAAACCTAGTAGTTTTAAATTTGAGAGATGGTGGCTCCTTAGAGAGGACTTCAAAACTCTGGTGGCAGATATTT
GGAATGCACCAGTCTCTGGCAAAACCTCAATAGAGGTGTGGCAAGAGAAAGTTAGGAGATTTA---GGAAAACCACCAAG
AGGTGGAGTGCCAACATTGAGGCAGATCTAAGAAGAAACAAAAAGAAGCTTATGTAAGATTATGATAAATTAGATGTTTT
AGCTGAGAATAGGGAGCTCAATGAGTAGGAGCAAGATAGTATGAGAGCTATACACCTAGAACTCCAAAGATACTGGTTGA
AGGAGGAGGTGAAAGCTAAACAAAGATCTAGAGATAGGTACATTAAGGAGGGAGATAGGAACACTGAATATTTTCATGCA
GTAGCTAACCAGAGGAGGAGGAAGGTCTATATCCACTCACTGGAA
>chr5B_1491
--------------------------------------------------------------------------------
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-------------CCCTTCCCTGGACGCTGAACCGAAAGCAACTTTGCTGCTGTCGCTGGCTCTCGCAGTCTTCGTCCGC
TTCCTACACCCCTTCCTCGGCGCGGCGCT---TCACAAATCTCGCGTTCGTCCCACTCTA--------------------
------------------TTTGCCTTCGAGGCCACTCGCGGCCTATGGCCCCAATTCGCCGCAACAGGCGGCAGGCGCAA
GGGAAGGAGGCCCAGTCGGGCTTTGAAGCGCCGTCTCTGCTCGGCGGCAATGCGCCGACCGGCGAGTTCGGCTCTTGTCC
CCAGCCGGATCGCACCGTGCACTTTCCCAGGCCCAAGGGGAACGGGCCTGCCGGCGAGTCCAGCTCCAGCAAGCATCGCT
CGCCGCCGCGGGAAGAGGACGTCGAGATGGTGGCCTGGCAGCAGACGGACCGTCAGCGGCGGAAGTGGAGCGAGTCGACG
GCGGGAGGCGAGCAAGCGAGGGCGCCGCGGCGATGGGCGGCGAGGTACTCGACCTTTCTCATGAAGGTCACGCCGTGGCA
CGAGGGAGGTGTCCTCCTCCTCCAGCCCGGTGACAACCCTCGCCTCGTCCTCAAGGACGACCGCGGCGTCACCATCGATG
CGCGGCTCCTTCGCGACGGCGAATCCGTGTCCTTTGATGACACCATCCTGTTCCCATGCCACCGGGCTATCGTCGGCGTC
GCCCTGGGAGAAGGTGACTCCCGGGTTTGAGTTCGTGGATCTGCGACTGATTGTTCGTACTGCGTCGCCGACGAGGGGAG
GCGCGAACAGGGCCGTGTTTTGAAAATTGGTTTATGAGCCCGGGCTCAGATGTACCGTTATCTATT-TTCCATCAAATTT
AGAGGA-TTTTATTACTCTCTTCAGTTTATATTAATTGTCGCTCAAACGGATGTATATAGTACTGAAATACAATTAATAT
GGGTCCAAAAAAATACTGCTTGATAGCGATATGGTTACAATAAGGTAAAAAGTTGCCAACAAGGAAATCATGACAGGGAT
AGACTTAGACATTTTTGAAGTAGTTAACTGGGAATTGAGAAACTCCTCAATTTCCTGCAATCTTAAGTTGAGAAGTAATC
AAGTGGGGTTTAGAGTGATTACAGTTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNGATTCTAGTACATCCACTCTGATTGGAGGGGATTTTAACCTAGTTAGAT-CAGTAGTGATAAGAGTAATGAAAATAT
TAACCACATATGGGCAGATAATTTTTATGCCTGGATTGAGATTTGAAGTTTGTTAGAAATTAAACTTTCTTC-AGAAAAT
ACACTTGGGCAAACAACCAGGCTGACATGATTATGTCTACAATAGATAGAATGTTTTGCAACAATGAGCTAGATGGCATT
TTCCCACTTGCATCTAGCAGTGCTCCCCCTAGATATGGTAGTGATCATATCCCAATTATTTGGGATTTAGGGATAAATAA
ACAAGCTAAACCTAGTAGTTTTAAATTTGAGAGATGGTGGCTCCTTAGAGAGGACTTCAAAACTTTGGTGGCGGATATTT
GGAATGCACCAGTCTCTGGCAAAACCTCAATAGAGGTGTGGCAAGAGAAAGTTAGGAGATTTA---GAAAAAACACCAAG
GGGTGGAGTGCCAACATTGAGGCAGATCTAAGAAAAAACAAAAAGAAGCTTATGGAAGCTTATGATAAGTTAGATGTTTT
AGCTAAGAATAGGAAGCTCAATGAGCAGGGGCAAGATAGCATGAGAGCTATACACCTAGAACTCCAAAGACACTGGTTGA
AGGAGGAGGTGAAAGCTAAACAAAGATCCAGAGATAGGGACATTAAAGAGGGAGATAGGAACACTGAAT-----CATGCA
GTAGCTAACCAGAGGAGGAGGAAGGTCTATATCCACTCACTGGAA
>SNPs
--------------------------------------------------------------------S-----S-----
----S--S--------------------S-------------S-------------------------------------
--------------------------------------------------------------------------------
---------SS---S-----------------------------------------------------S-----------
--------S-----------------------------------------------------------------------
---------------------------------S------------------------S---------S-----S-----
-S----------------------------------------------------S-------------------------
-S------S----------S------------------------------S-----------------------------
---------------------S---S-----------------S---------------------S--------------
--------------------------S------S--S-------------------------------------------
----S------------S--------------------------------------------------------------
---S----------------------------------S--------------------------S-S--S----S-S--
------------------------------------S------------S---------------S--------------
----------------------------S-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S------------S-------------------
---------------------------SS-S--------------------S------S-----S---------------
----------------------------------------------S--------S------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------S-S---
----------------------------------------S-----------S-------------------S-------
-----------------------------------------S--------S-----------------------------
---------S----------------------------------S-------------------------------S---
--------------S-----S-----------------------------------------------------------
--S-------------------------------------------S----S------S---------------------
----S--------S--S---------------------------------------------------------------
--------------------------------------------------------------------S-----------
------------------------------------------------S-------------------------------
----SSS------------S----------------------------S-------------------------------
----S-------------S---SS-----------------S--S----------------------------------S
-----------------------------------------------------S--------------------------
---------------------------------S--------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S-------------------------------S-----------------S-----S
------S-S-------------------------------------------------------S----S----------
-----------------S-S------------------------------------------------------------
-------------S-----------S---S------------S---------------------------S---------
-----------------------------------------------------------------------S--------
-------------------S-S------------S----------------------------SSS--------------
--------------------------------------------S-----------------------------------
-------------------SS-----------------------------------------------------------
------------------------------S-S----S------------------------------------------
---------------------------------------------
>forward_958
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----------------------------------------------------------GCAAATCTCAGCCATGTCCC--
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---------------------------------------------
>reverse_2674
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------ATGCATATGAGGGGGCCAAA---------------------------
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---------------------------------------------
