>input_sequence_51555
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------------------------------------------ATGGCGGTCGTCGAGCCGGTGCCCGGGGGCGACGTGAA
GCTATTCAACCGCTGGACCTTCGAGGATGTTCAGGTGAGAATG----------CCCTCCTCCCTTTCCCCACTCCCCCAC
G---GGCGGTGGCCTG-----GGGAGGCGCAGATCTGGGCGGTGGCTGACCGTGGCGGCCGTGTTTTCGCAGGTGAGCGA
CATCTCGCTGAACGACTACCTCGCGGTGACGTCGATGAAGCACTACACCTTCCTGCCGCACTCGGCCGGCCGCTACTCGG
CCAAGCGCTTCCGCAAGGCGCAGTGCCCCATCATCGAGCGCCTCACCAACTCCCTCATGATGCACGGGCGCAACAACGGT
AAGAAGATCATGGCCGTCCGCATCATCAAGCACACCATGGAGATCATCCACCTCCTCACCGACGCCAACCCCATCCAGAT
CATCGTTGACGCCATCATCAACAGGTACCGACCTCCATCTGTTTGTCCTCTCTGCAGTCTTGTCTCTAGGTGATGATAGT
TTTCCGGCAGTGACTAGTATTAGATCCACTTGAGTGAGTGGTGTTGGTAGTCGAATATCATTGTCAGTTTAATTTGTTCA
ACTGAAACTATTGCAGTATCCAGTTTAATGATATGTCTAGTACATCGTAGAATATTAACAGGTTCATCTCTTAGTTGAAA
TCTTGTACTGTGATTCGGATGATAGCCATGTGGTAACCCGCTAGACGGTATTGGCAAATTCCTGCTTCATATTAGGCTCT
ACCAGTTTTACTGTTTTGTTCTAGATGTTTTGGGTAATGAATGATCCGTGTTTGGTTTAACAGACTTGTAAATCTGATAA
ATGGTGAATTCTAGTTTGCTAGCAGTACCTAAAATTTCTTGCCTCAAAATGCTTGATTCTGATAGCACTGCTGAGGAAAT
TCTAGGGAGTGACAGTGTCCATTACCAGTGTTTTCCTAGATACATGCTTATTTAACTGTGACGTCTGTTGATTTTGTTCA
ACTTTGGATACTGTAGTTTCTGACTGAGTGCCTTAACTGTATTTGTGAATTTGTGTTGTATCTGGGCTCTTGATTTCTGT
ATGAACTTTGCTTGATGTGCTATTACCCTGTTGCAGTGGTCCACGTGAGGATGCTACCCGTATTGGGTCTGCTGGTGTTG
TGAGGAGGCAGGCTGTGGATATCTCCCCCCTGAGGAGGGTGAACCAGGCCATCTACCTTCTGACCACTGGTGCCAGGGAG
AGCGCCTTCAGGAATGTCAAGACCATTGCTGAGTGCCTCGCTGATGAGCTGATCAATGCTGCCAAGGGCTCATCCAACAG
GTAATACCATAAACCCTACTTCTCTT---CTTATCTGTCAATTTGAATTGAAGATGAGTG------CTCATGGATGCCTT
-ATCTTGGTTGCAGCTATGCCATCAAGAAGAAGGACGAGATTGAGCGTGTTGCCAAGGCTAACCGTTAA-----------
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---------------------------------------------------
>chr3B_1_TraesCS3B01G100800
GATCTACAGTAAGGCAAAAGCCTTACTGTTTTATGGTCAAAAAAAAGAAAATGGAAAAGTTCACCATGCACACAACATTG
CAATGCTAGGCTCGCATGCTAGTCTCTCGTGAAGCGGTCAATGCATGCAGGTAGCTGTTGCATGCATGTAGCCAGGTAGT
ACGAATTAAATAATTTAGAGGAGCAAGTGTGTCTGTTGTCCAACCCATAGTGGAAAGATCCAGAGTGTGGTCAGATGGTG
GGTCACACGGCGAATTCTAGAAATAGCTGACATAGGTTTGGAGCAGCCACTGTTCATGCGAATCCCACTACTCCCAACCG
TTAGATTGAGAGCACCAACGACCAGGATTGCTGTTCTAGATCCATTCAAAACTCGTACACTATATAGTGGTATAGATATA
GATGTAGTGTGAAATTAAGGTGGTTGTGTTTTCCTTTATTTCTTTTTTTTGAGCATCAGTACAGACACAAGCGCTCATAT
ACACGCGCATACACTCATCCCTATGAACGCACACACGCACACCCTACCCCTATGAGCACCTCCGAGAGACTGAGCCGGCA
TATCATCTTGAGATTTACGAATTAAGGTGGTTGTGTTTTCCTTTATTTCTTTATTAGAGTGCTGGGTTTGGATGGAGTTT
TTGTTTTGAACACATTTTTGGGCCCAACAGAAAAGCATATGCACAAAATTAGGGTGCTGGGTTTGGATGATGTTGTTTTG
GACCCCTAT--TTTGGGCCGAAAAGAAAAACATGTACACCAGTGGGTTCAGCGAAGTCCCCGCAGGAAAAAAAGGAGCGG
GTTCACCGAATCGGATCTCCACCGTCCGTCTGGCCGATGCGCTCGCGCCCCGCCACCGTCAGATCAGAAACCCTAGCCCC
CCAGCTGTATAAAAGAGGATCCCCTCGCACTCATCCCCGCCCCGCGCGCCGATTCCACTAGGTTTTCCAGCTCTCCCGCA
CCCGCCGCCGCCACATCCCCACTCCCCACCACCCCCTCAGCCATGGCGGTCGTCGAGCCGGTGCCCGGGGGCGACGTGAA
GCTATTCAACCGCTGGACCTTCGAGGATGTTCAGGTGAGAATG----------CCCTCCTCCCTTTCCCCACTCCCCCAC
G---GGCGGTGGCCTG-----GGGAGGCGCAGATCTGGGCGGTGGCTGACCGTGGCGGCCGTGTTTTCGCAGGTGAGCGA
CATCTCGCTGAACGACTACCTCGCGGTGACGTCGATGAAGCACTACACCTTCCTGCCGCACTCGGCCGGCCGCTACTCGG
CCAAGCGCTTCCGCAAGGCGCAGTGCCCCATCATCGAGCGCCTCACCAACTCCCTCATGATGCACGGGCGCAACAACGGT
AAGAAGATCATGGCCGTCCGCATCATCAAGCACACCATGGAGATCATCCACCTCCTCACCGACGCCAACCCCATCCAGAT
CATCGTTGACGCCATCATCAACAGGTACCGACCTCCATCTGTTTGTCCTCTCTGCAGTCTTGTCTCTAGGTGATGATAGT
TTTCCGGCAGTGACTAGTATTAGATCCACTTGAGTGAGTGGTGTTGGTAGTCGAATATCATTGTCAGTTTAATTTGTTCA
ACTGAAACTATTGCAGTATCCAGTTTAATGATATGTCTAGTACATCGTAGAATATTAACAGGTTCATCTCTTAGTTGAAA
TCTTGTACTGTGATTCGGATGATAGCCATGTGGTAACCCGCTAGACGGTATTGGCAAATTCCTGCTTCATATTAGGCTCT
ACCAGTTTTACTGTTTTGTTCTAGATGTTTTGGGTAATGAATGATCCGTGTTTGGTTTAACAGACTTGTAAATCTGATAA
ATGGTGAATTCTAGTTTGCTAGCAGTACCTAAAATTTCTTGCCTCAAAATGCTTGATTCTGATAGCACTGCTGAGGAAAT
TCTAGGGAGTGACAGTGTCCATTACCAGTGTTTTCCTAGATACATGCTTATTTAACTGTGACGTCTGTTGATTTTGTTCA
ACTTTGGATACTGTAGTTTCTGACTGAGTGCCTTAACTGTATTTGTGAATTTGTGTTGTATCTGGGCTCTTGATTTCTGT
ATGAACTTTGCTTGATGTGCTATTACCCTGTTGCAGTGGTCCACGTGAGGATGCTACCCGTATTGGGTCTGCTGGTGTTG
TGAGGAGGCAGGCTGTGGATATCTCCCCCCTGAGGAGGGTGAACCAGGCCATCTACCTTCTGACCACTGGTGCCAGGGAG
AGCGCCTTCAGGAATGTCAAGACCATTGCTGAGTGCCTCGCTGATGAGCTGATCAATGCTGCCAAGGGCTCATCCAACAG
GTAATACCATAAACCCTACTTCTCTT---CTTATCTGTCAATTTGAATTGAAGATGAGTG------CTCATGGATGCCTT
-ATCTTGGTTGCAGCTATGCCATCAAGAAGAAGGACGAGATTGAGCGTGTTGCCAAGGCTAACCGTTAAGATGGATGTGC
ATCTGAGGGTCTCATGCTTTTGGCTGGAGATTTTGGACTGAATGTGTTTTACAAGATATCTAGAACTGTTTTAGCTATGC
TTTAAGTTTGTGATGAAAGAACATTTCGATGTAGCGGCAAGGACTTGCCTGTCTT--------TATGAAACCAATTCCTG
TTCAGACAAATTTGGAGATGTTGAATGTGTCGTTGTGTTCTCTCATGATATGTCTTATCTAGTTCCGGGAATGTGTCGTT
GTGTTCTCTCATGATATGTCTTATCTAGTTCCGGGAATGCTTATTTCACTTTGCAATGGTATGC-------TACTATTTC
ATTCTTGTG--CTGTCGTAGTTGTCATTACCACAACTTACTCCTG-----------------------------ACCGTT
TTTGGCTGTGTTTCTCCTTTTGGCTGCCTTTTGTTTCAAACTTTGTAAAACTTTCATCAAAGTAACACAGGCACCACCAA
ATCAGTGCCTTAGCCCCCTGCCTTTTGTGTTTGTGTTTGTCTTGTGAA--------------------------------
-------AGACATCTTTAGGAGGTCAATATCCTTGGAATTATTTATCGCTCAAACATGTAGGCTTCTAAGGTGTAGGCAT
TTATATTTTTATTGTAACAACATTTCTTTTTAGTTCCAAGAAATGCTTCTAAGGTGTAGTGTAGGCATTGATATTAAGTC
AAATGTTGGTACAATAAAAATATAATA------------------------------------------GTAGTGATAAT
GATTTGGTTGTGTAGGCATTGATATTT----TTGTCTATAAACTTGTCAAAGTTAACAACTTG-----------------
--------------------TAGAAGGAATACATGTGCT--------TTTTGCACTGCGGAAATTGTTCTTTGTGCCGCG
TTCAACAAGTAGGCTC---TTTTCAAGAAAATAAACTGACCTGGGCTACAAGGAGTCGAGGAAATA---AGTATAATCGG
GTTTGGGTACTCAAATTATAGTGTTTATTAATCTGGAGTGATTGCTAGCCAAACAGCGGTTCTAGCATGCTCTGTGGCAA
ATCGTTACTCACAATATTCCTCTGGCATTAATTCGTGAATCATATTCAATG
>chr3D_613
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------ATTAGGGTGCTGGGCTTGGATGATGTTT
CTGTTGTGGATACTTTTTTGGGCCCAAAAGAAAAACATACACAGAAAATTA-------GGGTTTGAATGATGCTTTTTTG
GATACTTATTATTTGGGCCGAAAAGAAAAACATGCACACCACTGGGTTCAGCGAAGTCCCCGCAGAAAAAAAAGGAGCGG
ATTCAGCGAATCGGATCCTCACCGTCCGTCTGGCCGATGCGCGAGCGCCCCGCCACCGTCAGATCAGAAACCCTAGCTCC
CCAGCTGTATAAAAGAGGATCCCCTCGCCCTCATCCCCGCCCCGCGCGCCGATTCCACTAGGTTTTCCAACTCCCCTGCA
ACCGCCGCCGCCACCTCCCCTCCCCCCACCACACCCTCAGCCATGGCGGTCGCGGAGCCGGTGCCCGGGGGCGACGTGAA
GCTCTTCAACCGCTGGACCTTCGAGGATGTTCAGGTGAGAACGCCCTCGCAACCCCTCCTCCCTTTCCCA-CGGCCGCCG
CTGCGGCGGCGGCCCGGCAGTGGGAGGCGCAGATCTGGGCGGTGGCTAACCGTGGCGGCCGTG-TTTTGCAGGTGACCGA
CATCTCGCTGAACGACTACCTCGCGGTGACGTCGATGAAGCACTACACTTTCCTGCCGCACTCCGCCGGTCGCTACTCGG
CCAAGCGCTTCCGCAAGGCGCAGTGCCCCATCATCGAGCGCCTCACCAACTCCCTCATGATGCACGGGCGCAACAACGGA
AAGAAGATCATGGCCGTCCGCATCATCAAGCACACCATGGAGATCATCCACCTCCTCACCGACGCCAACCCCATCCAGAT
CATCGTTGATGCCATCATCAACAGGTACCGATCTCCCTCTGCTTATCTTCTATGCAGTATTGTC--TAGGTGATGGTAGT
TTGCCTGCAGTGACTAGTATTAGATCTAGTTGAGTGAGTGGTGTTGGTAGTCGAATATCACTGTCAGTTTAATTTGTTTA
ACTGAAACTATTCCAGTACCCAGTTTAATTATATTGTCTAGTAGTA-TAGAATGTTACCAGGTTCATCTCTTAGTTGAAA
TCTTGTACTATGATTTGGATGATAGCCATGTGGTAATCTGCTAAACGGTTTTGGCAAATTCCTGCTTCATATTAGGCTCT
ACCACTTTTACTGTTTTGCTTTAGGTGTTTGGG-TAATGGATTATCCTTATTAGGTTTAGCGGACTTTTATATCTAATAA
ATGTTGGATGCTAGTTTGCTAGCAGCACCTAAAATTTCTTGCCTTGAAAAGCTCGATTCTGTTAGCAGCGCTGAGGAAAT
TCTAGTGAGTGATAGTGTCCATTCCCAGTGTTTTCCTAGATACATGCTTATTTAACTGTGACGTCTGTTGATTTTGTTCA
AATTTGGATAATGTAGTTTCTCACTGAGTGCCTTAACGGTAATTGTGAATTTGTGTTGTATCTGGGCTCTTGATTTCTGT
ATGAACTTTGCTTCATGTGCTATTACCCTGTTGCAGTGGTCCACGTGAGGATGCTACCCGTATTGGGTCTGCTGGTGTTG
TGAGGAGGCAGGCTGTGGATATCTCCCCCCTGAGGAGGGTGAACCAGGCTATCTACCTTCTGACCACTGGTGCCAGGGAG
AGCGCCTTCAGGAACGTCAAGACCATTGCTGAGTGCCTTGCTGATGAGCTGATCAATGCTGCCAAGGGCTCATCCAACAG
GTA-TACCATAAACCCCATTTCTGTTTGCCTTGTCTGTCAATTTGAATTGAAGATGAGTGTGTGTGCTCATGGATTCCTT
-AACTTGGTTGCAGCTATGCCATCAAGAAGAAGGACGAGATTGAGCGTGTTGCCAAGGCTAACCGTTAAGATGGATGTGC
ATCTGAGGGTCTC--GCTTTTGGCTGGAGATTTTGAAGTGAATGTGTTTTACAAGATATCTAGAACTGTTTTAGCTATGC
GTTAAGTTTTATG-GAATGAACATTTCGATGTAGTGGCAAGAACGTGCCTGATGCTTGTCTTTG-TGAAACCTATTCCTG
TTCAGACATATTTGGATATGTTGAA--TGTCGATGTGTTCTGTCATAATATGTCTTGGTTTG------------------
----------------------ATCTATTCTTGCGAATGCTTATTCCACTTTGCAATAGTGTATGCATGCTTACTATTGC
ATACTTAAGCTCTGTCGTACTTGTCATTACAACAACTTTGGCCGATTCCCTATAGCAGATATGTCATTACCACAACCTTT
TATGACTGTTTTATCATCA-------------------------------------------------------------
---AGTCCATTAGTCACCTGCCTTCTGTGATTCTGTTTAAATTTTGACTTTCGACTGCCTGTTTCTTAGTCTTTTGCAAA
AACTACCAGACATCTTTCTTGAACAAAATTAGGAGGAGGTTAAATATTTGTTTTCTTTGGAGGAGG--AGGTGTAGGAGC
ATCTTAAGTTGCTATAGGAAGTGTTCTAGCAGGACAAAAGTTTTTCAAA--------------------------AAGTC
AAATGTTATAGCAGAATATATGAAGATTTGCAATACTAAATGTATAAAATATCAAAGTATATGGTGAATGTAGTGATAAT
TATTTGGCACTGTAGGCTTTTTGTCTATAAATTGTCTATAAACATGTCAATGTTTGAAGTTTTGACTTTTTGAAAAAATA
ATACACCTTATATTTAGGAATAGAAGGAGTATATATATACATATTAGTTTTGCAATGCAGAAATTGTTCTTTGTGCCGCA
TGCAACAAATCACCAACGGTTTTAAAGAAAATTTACTGACCTGTTCAAGGAGGGAAATAACAGAATTCGAGTATAATTGG
GTTTGTCTCTTGTAAGATGTAAA------------GAGTGATTGCTAGCCAAACAGCGGTTCTAGCATGCTCTGTGGCAA
ACCGTCACTCACCATATTCC-------------------------------
>chr3A_685
--------------------------------------------------------------------------------
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--------------------------------------------AAAATTAGGGTGCTGGATTTGGATGCTGTTTTTTTT
TGGATACTG-ATTTGGGCCGAAAAGAAAAACATGTACACCAGTGGGTTCAGCGAAGTCCCCGCAGGAAAAAAAGGAGCGG
GTTCAGCGAATCGGATCTCCACCGTCCGTCTGGCCGATGCGCGAGCGCCCCGCCACCGTCAGATCAGAAACCCTAGCTCC
CCAGCTGTATAAAACTGGATCCCCTCGCCCCCATCCCCGCCCCGCGCGCCGATTCCACTAGGTTTTCCAACTCTCCTGCA
CCCGCCGCCGCCACCTCCCCTCCCCC-ACCACACCCTCAGCCATGGCGGTCGTGGAGCCGGTGCCCGGGGGCGACGTGAA
GCTCTTCAACCGCTGGACCTTCGAGGATGTTCAGGTGAGAACGCCCTCGCAACCCCTCCTCCCTTTCCCGCCGGCCGCCG
CTCTGGCGGCGGCCGG-----GGGAGGCGCAGATCTGGCCGGTGGCTAACCGTG---------TTTCCGCAGGTGACCGA
CATCTCGCTGAACGACTACCTCGCGGTGACGTCGATGAAGCACTACACGTTCCTGCCGCACTCGGCCGGCCGCTACTCGG
CCAAGCGCTTCCGCAAGGCGCAGTGCCCCATCATCGAGCGCCTCACCAACTCCCTCATGATGCACGGGCGCAACAACGGG
AAGAAGATCATGGCCGTCCGCATCATCAAGCACACCATGGAGATCATCCACCTCCTCACCGACGCCAACCCCATCCAGAT
CATCGTTGATGCCATCATCAACAGGTACCGGTCTCCATCTGTTTCTCCTCTCTGCAGTCTTGTCTCTAGGTGATGGTAGT
TTGCCGGCAGTGACTAGTGTTAGATCCAGTTGAGTGAGTGGTGTTGGTAGTCGAATATCATTGTCAGCTTAATTT-----
----------------------GTTTAATGATATGTCTAGTACATAGTAGAATATTAACAGGTTCATCTCTTAGTTGAAA
TCTTGTACTGTGATTCGGATGATAGCCATGTGGTAGTCCGCTAAACGGTATTGGCAAATTCCTGCTTCATATTAGGCTCT
ACCAGTTTTACTGTTTTCTTCTAGATGTTTTAG-TAATGGATG-TCAGTATTAGGTTTAGCAGACCTGTATATCTGATAA
ATATTGTATACTAGTTTGCTAGCAGCACGTAAAATTTCTTGCCTCAAAATGCTCTATTCTGATAGCAGTGCTGAGGAAAT
TCTAGTGAGTGACAGTGTCCATTCCC----------TAGATACATGCTTTTTTA--------------------------
-----------------------CTGAGTGCCTTAACTGTAATTGTGAATTTGTGTTGTATCTGGGCTCTTGATTTCTGT
ATGAACTTTGCTTGATGTGCTATTACCCTGTTGCAGTGGTCCACGTGAGGATGCTACCCGTATTGGGTCTGCTGGTGTTG
TGAGGAGACAGGCTGTGGATATCTCTCCCCTCAGGAGGGTGAACCAGGCCATCTACCTTCTGACTACTGGTGCCAGGGAG
AGCGCCTTCAGGAACGTCAAGACCATTGCTGAGTGCCTCGCTGATGAGCTGATCAATGCTGCCAAGGGCTCATCCAACAG
GTA-TACCATAAACCCTACCTCTCTTTGCCTTGTCTGTCGATTTGAATTGAAGATA---GTGTGTGCTCATGGATGCCTT
TAACTTGGTTGCAGCTATGCCATCAAGAAGAAGGACGAGATTGAGCGTGTTGCCAAGGCTAACCGTTAAGATGGATGTGC
ATCTGAGGGTCTCGTGCTTTTGGCTGGAGATTTTGGAATGAATGTGTTTTACAAGATATCTAGAACTGTTTTAGCTATGC
TTTAAGTTTGTGATGAAAGAACATTTTGATGTAGCGGCAAGGACTTGCCTGATGCTTGTCTTCTATGAAACCAATTCCTG
TTCAGACAAATTTGGAGATGTTGAATGTGTCGTTCTGTTCTGTCATTATATGTCTTATCTATTACCGGGAATG-------
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---------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S--------S-------SS----
S----S--S-S--S-------------S------S----SS--S------------------------------S-----
--SS-S--------------------------------------------------------------------------
-----S------------------------------------SS---------------------------------S--
----------------------------S----------------------------------------S------S---
--------------S-----S-S---------S--------------------S--------------------------
---S-------------------------------------S---------------------------SS-SS--S-SS
S--------S----S--------------------------------S----------------------------S---
------------------------------------------------S-------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
---------S---------------------S------------S------------------------------S----
--S-------------------------S-------------------------------------------------S-
------------S-----S--------------------------S----------------------------------
------------------------------------S------S------------------------------------
---------------------------------S-----S---------S--S------S----------S---------
---S--S--S---------------S---------------------------S-------------S------------
-----S-----------------S--------------------------------------------------------
-S--------S----------S-------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
---S----------------------------S-----------------------------------------------
--S-----------------------------------------------------------------------------
-------------S-----------------------S------------------------------------------
---------------------------------------------------SSSS-------------------------
-----------------------------------------S----S----------------S---------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSS-----S-SSS-S-----------S-----------S--S-SS--------------S-
--S---SS-----------S----------S-------SSS--SS--------------------------------S--
-S--S----S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS---S-S----S-S--------S----S--S-----SSS--S---S--------------------------------
-----------------SSSSSSSS--SS-SSSS---SS-SSSSSSSSSSSSSS-S-SSSS-SSSSSS---------SSS
S-S-SSSS--SS-S--SS--SSS----SSSSS-SSSS---SSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
-------SSSS--SS-S-S--SS-SSS-----------------------------------------------------
S------SSS-------S--SSSSS-S----------------S------S---SSS-SS--S-----------------
----------------------------S--S--S-SSS---------------S---S--------------------S
-S------S-SSS-SS-------S--------SS---------SS-S-SS---SSSSS-SS-S-SS-----------S--
-----SS-SS-SS--SSSSSSSSSSSSSSSSSSSS---------------------------------------------
-S---S------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_551
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---------------------------------------------------ATGAGCACCTCCGAGAGACT---------
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---------------------------------------------------
>reverse_1450
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---------CGCCATCATCAACAGGTACC---------------------------------------------------
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---------------------------------------------------
>forward_636
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--------------------------------------------------------GAGTGCTGGGTTTGGATGGA----
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---------------------------------------------------
>reverse_1485
--------------------------------------------------------------------------------
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--------------------------------------------GTCCTCTCTGCAGTCTTGTCT---------------
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---------------------------------------------------
>forward_1113
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------------------------------------------------------CCTCCTCCCTTTCCCCACT-------
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---------------------------------------------------
>reverse_2959
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AA
ATCAGTGCCTTAGCCCCC--------------------------------------------------------------
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---------------------------------------------------
