>input_sequence_51459
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---------------------------ATGGAGCCGTGGCTGCCGGTGCTCCGCCACCTGCTCGCCTCCTCCGCCCCCAA
CGCCGCCGCCTTCTCGTCCTCGAACAGCAGCCCCTGCTCTCCTCCTCCGGCGGCGGGCCTCCTCCGCTTCCTCCTCTCCC
CGGTGCCCGCGCTCCCCGCCTCCGAACCCACGGCCGTCCTCTTCCAGACCCTCCCGCCCTTGCTTCAGTCCCAGGCGCTC
TCCTTCCTGTCCTCCTCCGCCTCCCTCCTCGACCCGCTCCAGCTCCGCTCCCTCGCCTCTCGCGTCCTTTCCGCCCCGCC
CGGCCGGTGTGATGAATTCTGGGTCCGCCGGGGCGCCCACCACCTGCTCGACGGATTGCCTGACAAAGACGTTCCTGATG
TCCCCTGGGAGTTCAACGAGGAGTTCCACGAGCCGCCCCCGTGGCTTAAAGCAGAGGCGGCTCGGACACAGCCTGTCCTT
CCGTGGCTGCCTCTCGATTGTCGGAGCATGGTGCCGGGTGGGGTCTGTGCCGACCAGGATGGTTTGGATGGAGTTCGGGG
AGTTCGGTTGGAGTCTCTGGGGCTGGAGCAAGACGAGTATTCGTTCATGC---AGGAGGGTGGGCGTGCTCCTTCTCCTC
CGGCTCCTCCACTAGGAAATTCAGTCGTCCATAGGGCTCTAGCTCTGAAGAAGGAAATTGAGATGGCAGAGTCAGTTTTG
GGTGCTCAGCAGGCAGCCAACAATTTGCATGATCTCTGCCTTGAATCCGGGAATGCTGAGGCGGTACTTAGCTTAGTACA
GCCATGGGTAGCTGATGATGACACAGTGAGGGTTCTGCTGTCAAATTTGGTACTCGAGGAAGATGGGATGCATGGAAAAG
GCCCGGCACTTGTGCTGTGTTCTCTTGCCCTACCAAAGTTACTTGACCTTCAAAGTGCAGCTTCATCTGGCCTTCTTTCT
GCTGCATTAGATGTCTGCAAACGCCACCCAGCTGCTGCACTGGAGGCTGTCCTCTTCCCGCTAGTTCTTAGAAAACAAGG
CCTGAATGCTCCTCAGTGCGATGTGCTCACACGGATTGTCAAGGATTGTATGCACCCTTTGCATGTCACCGCCTTCTGTC
ATAGGCTGCTTTCAGGGGAGGAGAGAGAGCGGAAACCGATCTGTATGCCTCAGCATCGGGAAAATATTGGCTGCGATTTG
GTCTGGACAGAATCTCTCTTTGCACTATTCTACAACATTCTCAGTCAAGACATTTGCCTAACACCAAGCACCATCGAGAA
GCTAGTGTCCATTATTGATGATATGGCAATAAAGTTCCCAAAGTCGCTTAAATTTGGCAACTTCTTTCTGTGCTTCGTCT
CGAAGTGTTGGCATGAATGTAAGATCCACAGGGTTTTACTTGAGAGAGCTGCTGAGACAACCAGCACTTTCTTGACTAAA
GCTATATTGGTCAAACTGCGGCCTGCTAATTGA-----------------------------------------------
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>chr7D_1_TraesCS7D01G359400
AATCATGCGTCCAAATCTCGAACCGTTTTCATCATTGGATTCCTCGCGTCGAGATCTTCAAAACGAGATCCCATATTGAT
AGGTTTTGACGAAATTTTTTTCACG---AAAAAA-CCGAAC---AAAAAGCGAACCGGGAGCACGGTTTTTTTTCCTTTT
CGAAAGAGGCACGCCCGTGACTCTCGCGGAAGCACAACCGTGCCTCTCGTGAAAGCAAAACCGTGACTCTCGTGAACGAA
AAAAAA-CG--GAAAACGCGTA-TTTTTT-CCCTTTCC--AA-GA-GGCACGGCCGTGACTCTCGCGAAAGCACAACCAT
GCCTCTCGCGGAAGCAAAACCGTGA-CTCTCGC-GAAAGAAAAAAAAACA--GAAAACATGTTTTGTTTTTCCCTTTCCG
--AGAGGCACGGCCGTGACTCTCACGAAAGTACAACCGTGCCTCTCGCGGAAGCAAA-TCGTGACTCTCGCGAAAGAAAG
AA-------AAAACAGAAAACCCG----TTTTTTCCGTTTTTGAAAGGC---ACCGTGACTCTCGCTAAAGCACAACCGT
GCCTCTCGCGGAAGAAAAA-CCGTGACTTTCG-CG-AAAGAAAAAA-CAACAACGCATTTTTCGCTAAAA-AAAAAATTT
G---------AATTTTTTTACCGAAAAGCTAAGGAAGACCGGGGGAAAA-CCAAAACATCGA---------A-AAAACCG
TTTAAAAGGCCGAAAACGCATGTGAAAAAAT--AAAAATAAAA-TAAAATCCGGAGGGGGCGTCCAGAGCGCGACACGTG
GCGAATGTCTGAGAGCGCGCCAAGTGGCGCTGATCGTTGCGAGGCTCCCAAAGGAGCGCTTG--TTAACTAGTTGCACTC
GCAGAGAGGGTCACATAGGAAGTCCCCTCCCAGAGGGAGTCATTTACTATTAGAGTGGGCTGAACTTGTCCAGTAGGCCC
AACTGGCGCCTCTAAATAAAAAATCGCGGGAATGGCCGGGCTGCTACCAATTTGCAAGAAATTTTCAAAAAGAAAAAGAA
AAACCAATTTGCAAGAGACCACTTCCCATGGAGCCGTGGCTGCCGGTGCTCCGCCACCTGCTCGCCTCCTCCGCCCCCAA
CGCCGCCGCCTTCTCGTCCTCGAACAGCAGCCCCTGCTCTCCTCCTCCGGCGGCGGGCCTCCTCCGCTTCCTCCTCTCCC
CGGTGCCCGCGCTCCCCGCCTCCGAACCCACGGCCGTCCTCTTCCAGACCCTCCCGCCCTTGCTTCAGTCCCAGGCGCTC
TCCTTCCTGTCCTCCTCCGCCTCCCTCCTCGACCCGCTCCAGCTCCGCTCCCTCGCCTCTCGCGTCCTTTCCGCCCCGCC
CGGCCGGTGTGATGAATTCTGGGTCCGCCGGGGCGCCCACCACCTGCTCGACGGATTGCCTGACAAAGACGTTCCTGATG
TCCCCTGGGAGTTCAACGAGGAGTTCCACGAGCCGCCCCCGTGGCTTAAAGCAGAGGCGGCTCGGACACAGCCTGTCCTT
CCGTGGCTGCCTCTCGATTGTCGGAGCATGGTGCCGGGTGGGGTCTGTGCCGACCAGGATGGTTTGGATGGAGTTCGGGG
AGTTCGGTTGGAGTCTCTGGGGCTGGAGCAAGACGAGTATTCGTTCATGC---AGGAGGGTGGGCGTGCTCCTTCTCCTC
CGGCTCCTCCACTAGGAAATTCAGTCGTCCATAGGGCTCTAGCTCTGAAGAAGGAAATTGAGATGGCAGAGTCAGTTTTG
GGTGCTCAGCAGGCAGCCAACAATTTGCATGATCTCTGCCTTGAATCCGGGAATGCTGAGGCGGTACTTAGCTTAGTACA
GCCATGGGTAGCTGATGATGACACAGTGAGGGTTCTGCTGTCAAATTTGGTACTCGAGGAAGATGGGATGCATGGAAAAG
GCCCGGCACTTGTGCTGTGTTCTCTTGCCCTACCAAAGTTACTTGACCTTCAAAGTGCAGCTTCATCTGGCCTTCTTTCT
GCTGCATTAGATGTCTGCAAACGCCACCCAGCTGCTGCACTGGAGGCTGTCCTCTTCCCGCTAGTTCTTAGAAAACAAGG
CCTGAATGCTCCTCAGTGCGATGTGCTCACACGGATTGTCAAGGATTGTATGCACCCTTTGCATGTCACCGCCTTCTGTC
ATAGGCTGCTTTCAGGGGAGGAGAGAGAGCGGAAACCGATCTGTATGCCTCAGCATCGGGAAAATATTGGCTGCGATTTG
GTCTGGACAGAATCTCTCTTTGCACTATTCTACAACATTCTCAGTCAAGACATTTGCCTAACACCAAGCACCATCGAGAA
GCTAGTGTCCATTATTGATGATATGGCAATAAAGTTCCCAAAGTCGCTTAAATTTGGCAACTTCTTTCTGTGCTTCGTCT
CGAAGTGTTGGCATGAATGTAAGATCCACAGGGTTTTACTTGAGAGAGCTGCTGAGACAACCAGCACTTTCTTGACTAAA
GCTATATTGGTCAAACTGCGGCCTGCTAATTGAAGTGATGTCTTGAGTGTTTAAAGATAAGCTCCTGGTGGGCTACTTGC
CATTCAGATTAACCAAGTATGTAACTGCGTGGAAGGATTATTTTGTTTGATTTTAAAAATGGACAGCTTTTGTAGTTCGA
GAAACCATTGCTTCATATATACAGCGTAGCAATCAATTTAATATGAAAATGTTATTAACAAAAGGTACATAATTTTCTTA
TGCATGGCTCAAGTGCAACAAAGTTTGACTTTAG-------TTTATGTTCAG--AAGTATAGGATTTCTATTAAGGGTTG
TCTTTGACTTTTGAAATGGACAGCTTGTGTAGTACCAGAAACAGTTGAACAAC--GATG--------CATATACGCAAAG
TAGCAAGTAATTTACTATTAAAAAGGCATTTATAAAAATATAAAATTTCTGTTATATATGACTCAAATGCAGCAAGATAG
GG-AGATTGTCGTGAAATCCAGGATGTCCAGTGTAAGGAAATAAATAAGCCAG--------TTTAATCTTAACTGTAG--
-----T--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TAACAATTATCCAGTGGTCAATTTCAGTTGTACCTACCC-------------AACACCATA
GGTTTC-ATGTGATATGTATGCATTCGATGCCTTCATGTTAGTTTGTTAAATTGTTATGCTCATATGCATGTGTTTTTCT
ATCAGTGTAGGATTTATTATTAGATCTCTGTTAACCATGATTCTCTGTCATAGGCACACAGATATGCTCCTGGTGCCCAG
CTCATGCG-TTTCAGATTCAGTTAGCTCATGAGTAGGTTCTGCTTTTCTTTTT-CCTCGAACCGAGTAGTTTCTGCTCTT
GAACTAATGAG--------TCGAGGATGGGAGGTGTTTTCTAGT------------------------------------
----------------------------------------------GCATACATGTTTCCTGTTACTGTTTCGTTGCTAC
ACAACTATTCTGAGTCATATTTCACATGGCGTATCATTAGCGCAGTCAGCGTGACTGCCGGTTTAAAATGCAAATAACTT
TACTAAGTTAGTAAGCTCTGGGATAAATTTTGTCTAAAGTGACTTTGTTATATTTCCATAGCATGAA
>chr1A_5
----ATGCGTCCAAATCTCAAACCGTTTTCACCATTGGATTCCTCGCGTCGAGATCTTCAAAACTAGATTCCATGTTGAT
AGGTTTTGATGAACTTTTTTTCACT---AAAAAA-CCGGGCGAAAAAACCCGAACCGGGAACACGGTTTTTTTTCCTTTC
CGAAAGAGGCACGTCCGTGCCTCTCGCGAAATCACACCCGTGCCTCTCGTAGAAACAAAACCGTGACTCTCGTGGAAGGA
AAAAAA-AC--AGAAAACGCGT-ATTTTT-CCGTTTTC--GA-GA-GGCACGGCCGTGACTCTCGCGAAAGCACAACCGT
GCCTCTCGCGGAAGCAAAACCGTGA-CTCTCAC-GAAAGAAAAAA-A-CA--GAAAACACGTTTTGTTTTTCCCTTACTG
--AGAGGCACGGCCGTGACTCTCGCGAAGGCACAACCATACCTCTCGCGGAAGCAAAACCGTGACTCTCGCGAAAGAA--
AG-------AAAAACAGAAAACGT----ATTTTTTCGTTCCCGAAAGGCACGGCTGTGACTCTCGCTAAAGCACAACCGT
GCCTCTCGCGGGA-AAAAA-CCGTGACTTTCG-CG-AAAGGAAAAAAAGAAAATG---TTTTTTCCACGCAAAAAAAAAA
--TC--GA-AATTTTTTTGATCGAAAAGCTTAGGAAGACCGGGGGAAAA-CCAAATTGTCGAAAAAACTGGAAAAAACCG
TTTAAAAAGCCGAAAACGCGTGCGAAAAAAT-----AAAAAA-----AATCCAAAGGGAGCGTCCAGAGCGAGACATGTG
GCGAATGGCTGAGAGCGTGCCAAGTTGCGCTGATCGTTGCGAGGCTCCCGAAGGAGCGCTCG--TTAACTAGTTGC----
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>chr7D_6
-----TGTGTCCAAATCTCAAACCGTTTTCACCATTGGATTCCTCGCGTCGAGATCTTCAAAACTAGATCCAATGTTGAT
AGGTTTTGACGAACTTTTTTTCATG---AAAAAAACCGGACG-AAAAAACCAAACCGGGAGCACGG-TTTTTTCCCTTTC
CGAAAGAGGCACGCCCGTGCCTCTCGCGAAATCACAACCGTGCCTCTTGTGGAAGCAAAACCGTGACTCCCGTGGAAAGA
AAAAAA-AA--CAAAAAACGCG-TTTTTT-CCCTTTCC--GA-AA-GAGGC--------CTCTCGCGAAATCACAACCGT
GCCTCTTGTGGAAGCAAAACCGTGA-CTCCCGTGGAAAGAAAAAAAA-CA--GAAAACGCGTTTT----TTCCCTTTCCA
AAAGAGGCACGCCCGTGACTCTCGCGAAAGCACAACCGTGCCTCTGGCAAAAGCAAAACCGTGACTCTCGCGAAAAAA--
AAT----AGAAAAAG------CAT----ATTTTTCCCTTTTCGAGAGGCACGTTCATGACTCTCGCAAAAGCACAACCGT
GCCTCTCGCGAAAGGAAAAA------------------------------------------------------------
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>chr2D_6
-----TGCGTCCAAATCTCAAACCGTTTTCACCATTGGATTCCTCGCGTCGAGATCTTCAAAACTAGATCCCATGTTGGT
AGGTTTTGACGAACTTTTTTTCATG---AAAAAAACCGGACA-AAAAAACCAAACCAGGAGCATGGTTTTTTTCCCTTTC
TGAAAGAGCCACGCCCATGCCTATCGCGAAATCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTCGTGGAAGGA
AAAAAA-CG-----------CG-TTTTTT-CCCTTTCCGAAA-GA-GGCACGCCCGTGACTCTCGCGAAAGCACAACCGC
GCCTCTGGCGAAAGCAAAACCGTGA-CTCCCGT-GAAAGAAAAAAA---ACAGAAAACGCGTAT--TTTTTCCCTTTCCG
--AGAGGCACGGCCGTGACTCTCACGAAAGCACAACCGTGCCTCTTGCGGAAGCAAAACTGTGACTCTCGCAAAAGAA--
AA-------AAAACAGAAAACGCGTTTTGTTTTTCCCTTTCCGAGAGGCACGGCCGTGACTCTCACGAAAGCACAACCGT
GCCTCTCGCGGAAGTAAAA-CCGTGACTCTCA-CG-AAAGAAAAAAACAGAAACGTGTTTTT------------------
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>chr2D_6
-----TGCGTCCAAATCTCGAACAATTTTCATCATTGGATTCCTCGCGTCGAGATCTTCAAAACTAGATCCTATGTTGAT
AGGTTTTGACGAATTTTTTTTTTCACAAAAAAAA-CCGGCCG-AAAAAACCGAACCGGGAGCACGGTTTTTCCCCCTTTC
CGAAAGAGACACGCCCGTGCCTCTCGCAAAATCACAATCGTGCCTTTCGTGGGAGCAAAACCGTGACTCTCGTGGAAGGA
AAAAAA-AC--AGAAAA-------------------------------------CGTGACTCTCGCGAAAGCACAACCGT
GCCTCTCGCGAAAGCAAAACTGTGA-CTCTCGC-GAAAAAAAACC-A-GA--GAATA--CGTAT--TTTTTCCCTTTCCG
--AGAGGCACGGCCGTGATTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAATCGTGACTTTCGCGAAAGAAAA
AA-------AAAACAGAAAATGCGTTTTGTTTTTCCCTTTCCGAGAGGCACGGCCGTGACTGTCGCGAAAGCACAACCGT
GCCTCTCGCGGAAGCAAAA-CCGTGACTCTCG-TG-AAAAAAACCC-AGAAAACGCGTTTTT------------------
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>chr6B_6
-----TGCATCCAAATCTCGAACCGCTTTTACTGTTGGATTCCTCGCGTCGAGATCTGCAAAACTAGATCCCATGTTGAT
AGGTTTTGATGAACTTTTTTTTCAC---AAAAAAAACGGACG-AAAAAACCCAACCGGGAGCACGGGTTTTTCCCCTTTT
CG-AAGAGGCACGCCCGTGCCTCTCACGAAATCACAACCGTGCCTGTCGTGAAAGCAAAACTGTGACTCTCGCGGAAGGA
AAAAAAGAA--GAGAAAACGCA-TTTTTT-TCGTTTCT--GAGGA-GTCACGGCCGTGACTCTAGCGAAAGCACAACCGT
GCCTCTCGCGGAAGCAAAACCGTGA-CTCTCGC-AAAAGAAAAAAGA-CA--GAAAACGCGTTC--ATTTTCTGTTTTCG
--AGA-GCACGGCCGTGACTCTCGCAAAAGTACAACCGTGCCTCTCACGGAAGCAAAACCGTGACTCTCGTGAAAGGAAA
AA-------AAAATAGAAAACGCGTTTATTTTTTTCGTTTCTGATAGGCACGACCGTGACTCTCACGAAAGCAAAAACGT
GCCTCTCGCGAAAGCAAAA-CCGTGACTCTCG-TG-AAAGAAAAAAAATAACGTG---TTTTTT-GCGC--AAAATAAAA
ATTTGAAA-TTTCATTTTTATCGAAAAGCTAAGGAAGACCGGTGGAAAA-CCAAAACGTCGA---------AAAAAACTG
TTTAAAATGC-AAAAACACGTGCGGAAAAAGT--------AAA-AAAAATTCGGAGGGAGCGCCCAAAGCGCGACACGTG
ACGAATGGCTGAGAGCGCGCCAAGCGGCGCTGATCGTTACGAGGCTCCCGAAGAAGCGCTTG--TTAACTAGTT------
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>chr2A_135
CACGT---------------------------------------------------------------------------
--------------------------------------------------------------------TTTTTTTCGTTT
TC-GAGAGGCACGGCCGTGTCTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTCGTGAAAGAA
AAAAAA-T--AGAAAACGCGTATTTTTTT-CCCTTTCC--GA-GA-GGCACGGCCGTGATTTTCGCGTAAGCACAACCAT
GCCTCTCGCGGAAGCAAAACCGTGA-CTCTCAC-GAAAGAAAAAAAA-TA--GAAAACGCGTTTTGTTTTTCCCTTTCCG
--AGAGGCACGGCCGTGACTCTCGCAAAAGCACAACCGTGCCTCTCGCGGAAGAAAAATCGTGACTCTCGCAAAAGAA--
AA-------AAAAACAGAAAACGC---ATTTTTTTCGTTTCCAAAAGGCACGGCCGTGACTCTCGATAAAGCAAAACCGT
GCCTCTTGCGAAAGAAAAA-CCGTGACTTTTG-CG-AAAGAAAAAAAAGAAAACGCGTTTTTTT-GCGC--AAATTTTTT
TTTC--GA-ATTTTTTTTGATTGAAAAGCTAAGAAAGACCCGGGGAAAA-CCAAAACATTGA---------AAAAAACCA
TTTAAAATGCCGAAAACGCGTGTGGAAAAAT--AA-AAGAAAA-CAAAATCCAAAGGGAGCGTCCAGAGCGCGACACGTG
GCGAATGGTTGAGAGCGCGCCAAGTGGCGCTGATCGTTGCGAGGCTCCCGAAGGAGCGCTCG--TTAACTAGTTGC----
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>chr3A_136
ACGTGT--------------------------------------------------------------------------
-------------------------------------------------------------------TTTTTTTTCGTTT
CT-GAGAGGCACGGCCGTGACTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTCGCGAAAGAG
AAAAA----TAGAAAACGCGTA-TTTTTTCCCCTTTCT--GA-GA-GGCACGGCCGTGACTTTTGCGAAAGCACAATCGT
GCCTCTCGCGGAAGCAAAACCGTGA-CTCTCGC-GAAAGAAAAAAA---A--GAAAACATGTTTTGTTTTTCCCTTTCCG
--AGAGGCACAGCCGTGACTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTCGCGAAACAA--
AGA----AAAAAAACAGAAAACAC---GTTTTTTTCGTTTCCGAAAGGCACGGCCATGACTCTCGCTAAAGCACAACCGT
GCCTCTTGCGAAA---AAAACCGTGACTTTCA-C-----GAAAAAAAAGAAAACGCGTTTTTTTCGCGC--AAAAAAAAT
--TC--G--ATTTTTTTTGATAGAAAAGCTAAGAAAGACCGGGGGAAAA-CCAAAACGTCGA---------AAAGAACCG
TTTAAAAGGCCGAAAACGCGTGCGAAAAA-T-----AAAAAAA-TAAAATCCGAAGGAAGCGTCCAGAATGCGACATGTG
GCGCATGGCTGAGAGCGCGCCAAGTGACGCTGATCGTTGCGAGGCTCCCGAAGGAGCGCTCTATTTAACTAGTT------
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>chr3A_137
CGTTT---------------------------------------------------------------------------
---------------------------------------------------------------------TTTTTTCGTTT
TC-GAGAGGCACCACCGCGACTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCATGACTCTCGTGAAAGAA
AAAACA-AATAGAAAACGCGTA-TTTTTT-CCCTTTCC--GA-GAAGGCACGGCCGTGATTTTCGCGTAAGCACAATCAT
GCCTCTCACGGAAGCAAAACCGTGCTCTCACGA-AAGAAAAAAAAAA-CA--GAAAACACGTTTTGTTTTTCCCTTTCCG
--AGAGGCACGGCCGTGACTCTCGCAAAAGCACAACCGTGTCTCTCGCGGAAGAAAAACCGTGATTCTAGCAAAAGAA--
AAA-AACAGAAAACG------CGT----TTTTTTTCGTTTCCGAAAGGCACGGCCGTGACTCTCGATAAAGCACAACCGT
TCCTCTCGCGGAAGAAAAA-CCGTGACTTTTG-CG-AAAGGAAAAAAAGAAAACGCGTTTTTTC-GCGC--AAAAAAAAA
--TC--GA-AACTTTTTTTATCGAAAAGCTAAGAAAGACCGGGGGAAAA-CCAAAACGTCGCGGG--------AAAAACC
GTTTAAAAGTCGAAAACGCGTGCGAAAAAATTAAA-AAAAAAA-CAAAATCCGAAGGGAGCGTCCAGAGCGCGACACGTG
GCGAATGGCTGAGAGCACGCCAAGTGGCGCTGATCGTTGCGAGGCTCCCAAAGGAGCGCTCG--TTAACTAGTTGC----
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>chr6D_141
--------------------------------------------------------------------------------
-------------------------------------------------------------------TTTTTTCCCTTTC
CGAAAGAGGCACGCCCGTGACTCTCGCGAAAGCACAACCGTGCCTCTGGC--AAGCAAAACCGTGACTCTCGCGAAAGAA
AAAATA-AATAGAAAACGCGTA-TTTTTT-CCCTTTCC--GA-GA-GGCACGGCCGTGACTCTCGCAAAAGCACAACCGT
GCCTCTCGCGGAAGCAAAACCGTGA-CTCTCGC-GAAAGAAAAAAAA-CA--GAAAACGCGTTTTGTTTTTTCCTTTCCG
--AGAGGCACGGTCGTGACTCTCACGAAAGCGCAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTCGCGAAAGAA--
--G------AAAAACAGAAAACGC---GTTTTTTTCGTTTCCGAAAGGCACGGCCGTGACTCTCGTTAAAGCACAACCGT
GCCTCTCGCGAAA---AAGGTGACT--TTTCA-CG-AAAGAAAAAAAAGTAAACGCGTTTTTTC-GCGC--AAAAAAAAA
-TTC--AA-TTTTTCTTTTGTCGAAATGCTAAGGAAGACCGGGGAAAAAACCAAAACGTCGA---------AAAAAACCG
TTTAAAAAGCCGAAAACGCGTGCGAAAAAAT-----AAAAAAAATAAAATCTAAAGGGAGCGTCCAGAGCGCAACACGTG
GCGAATGACT--GAGCGCGCCAAGTGGCGCTGATCGTTGCGAGGCTCC-GAAGGAGCGCTCG--TTAACTAGTTGC----
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>chr6D_141
--------------------------------------------------------------------------------
-------------------------------------------------------------------TTTTTTCCCTTTC
CGAACGAGGCACGCCCGTGACTC--GCGAAAGCACAACCGTTCCTCTGATAAAAGCAAAATCGTGACTCTCGCGAAAGAA
AAAAAA-C--AGAAAACGCGTA-TTTTTT-TCCTTTCC--GA-GA-GGCACGGCCGTGACCCTCGCGAAAGCACAACCGT
GCCTCTCGCGGAAGCAAAACCGTGA-CTCCCGC-GAAAGGAAAAAAA-CA--GAAAACGAGTTTCGTTTTTCCCTTTCCG
--AGAGGCACGGCTGTGACTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGTAAAACTGTGACTGTCGCGAAGAAA--
AAAAAACAGAAAACG------CGT----TTTTTTTCTTTTCCGAAAGGCACGGCCGTGACTCTCGCTAAAGCACAACCGT
GCCTCTCGCGGAAGAAAA--CCGTGACTTTTCGCGAAAGGAAAAAAAAGAAAACAGGTTTTTTC-GCGC--AAAAAAAAA
AATTCAAA-AATTTTTTTGGTCGAAAAACTAAGGAAGACCGGGGGAAAA-CCAAAACGTCGA---------AAAAACCCG
TTTAAAAAGCCGAAAACGCGTGCGGAAAAAT-----AAAAAAA-CAAAATCTAAAGGGAGCGTTCAGAGCGCGACACGTG
GCGAATGGCTGAGAGCGCGCCAAGTGGCGCTGATCGTTGCGAGGCTCCCAA-GGAGCGCTCG--TTAACTAGTTGCTCTC
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>chr6A_141
--------------------------------------------------------------------------------
-------------------------------------------------------------------TTTTTTTCCGTTT
CC-GAGAGGCACGACTGTGACTCTCGTGGAAGCACAACCGTGCCTCTCGCAGAAGCAAACCCGTGACTCTCGCAAAACAA
AAAAAA-AC--AGAAATCGCGT-ATTTTT-CCCTTTCT--AA-GA-GGCACGGCCGTGACTCTCGCGAAAGCACAACCAT
GCCTCTCGCGGAAGCAAAACCGTGA-CTCTCAC-GAAAGAAAAAAAA-CA--GAAAACGCATTTTGTTTTTCCCTTTCCG
--AGACGCACGGCCGTGACTCTCACGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTCGCGAAAGAA--
AAG-----AAAAAACAAAAAACGC---GTTTTTTTCGTTTCTGAAAGGCACGGCCGTGACTCTCGCTAAAGCACAACCGT
GCCTCTCGTAGAAAAAAA--TCGTGACTTTCA-CGAAAGAAAAATAAAGAAAACGCGTTTTTTC-GCGC--AAAAAAATT
G---------ATTTTTTTAATCGAAAAGCTAAGGAAGACCGGGGGAAAA-CTAAAACAT--A---------AAAAAATCG
TTTAAAAGGTCAAAAATGCGTGCAGAAAAAT-----AAAAAAA-CAAAATCTGGAGGGAGCGTCCAGAACGCAACACGTG
GCAAATGGCTGAGAGCGCGCCAAGTGGCGCTGATCGTTGCGAGGCTCCCAAAGAAGCGCTCG--TTAACTAGTT------
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>chr2D_142
--------------------------------------------------------------------------------
--------------------------------------------------------------------TTTTTCCCTTTC
CGAAAGAGGCACGCCCGTGACTCTCGCGAAAGCATAACCGTGTCTCTGGCAAAAGCAAAACCGTGACTCTCCGAAAGAAA
GAAAAA-A--AGAAAACGCGTA-TTTTTT-CCCTTTCC--GA-GA-GGCACGGCCGTGACTCTCGCAAAAGCACAATCGT
GCCTCTCGCGGAAGCAAAACCGTGA-CTCTCGC-CAAAGAAAAAAAA-CT--GAAAACGCGTTTTGTTTTTCCCTTTCCG
--AGAGGCACGGCCGTGACTCTCATGAAAGCACAACCGTGCCTCTCGCGGAAGTAAAACCGTGACTCTCGCGAAAGAA--
AAG------AAAAACAGAAAACGT---GTTTTTTTCGTTTCCGAAAGGCACGGCCGTGACTCTCACTAAAGCACAACCGT
GCCTCTCGCGAAA---AAA-ACGTGACTTTTC-AC-GAAAGAAAAAAAGTAAACGCGTTTTTTC-GCGT--AAAAAAAAT
-TTC--AAATTTTTTTTTTAACGAAACGCTAAGGAAGACCGGGGAAAAA-CCAAAACGTCGA---------AAAAAACCA
TTTAAAAAGCCGAAAACGCGTGCGAAAAAATTTAAAAAAAAAA-CAAAATCTGGAGGGAGCGTCCAAAACGCGACACGTG
ACGAATGGCTGAGAGCGCGCCAAGTGGCGCTGATCGTTGCAAGGCTCCCGAAGGAGCGCTCG--TTAACTAGTTGC----
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>chr7A_975
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-AACCAATTTGCAAGAGACCACTTCCCATGGAGCCGTGGCTGCCGGTGCTCCGCCACATGCTCGCCTCCTCCGCCCCCAA
CGCCGCCGCCTTCTCGTCCTCGAGCAGCAGCCCCTGCTCTGCTCCTCCGGCTGCGGGCCTCCTCCGCATCCTCCTCTCCC
CGGTACCCACGCTCCCCGCCGCCGAGCCCACGGCCGTCCTCTTCCAGACCCTCCCGCCCTTGCTTCAGTCCCAGGCGCTC
TCCTTCCTGTCCTCCTCCGCCTCCCTGCTCGACCCGCTCCAGCTCCGCTCGCTCGCCTCTCGCGTCCTTTCTGCCCCGCC
CGGCCGGTGTGATGAATTCTGGGTCCGCCGGGGCGCCCACCACCTGCTCGACGGATTGCCTGACAAAGACGCTCCTGATG
TCCCCTGGGAGTTTAACGAGGAGTTCCACGAGCCACCGCCGTGGCTTAAAGAAGAGGCGGCGCGGACACCACCTGTCCTT
CCGTGGCTGCCTCTCGATTGCCGGAGCTTGATGCCTGGTGGGGCCCGCGTCGGCGGGGATGGTTTAGAT---------GG
AGTTGGGTTGGAGTCTCTGGGGCTGGAGCAAGATGAGTATTCGTTCATACAGGAGGAGGTTGGGCGTGCTCCTTCTCCTC
CGTCTCCCCCACTTGGAAATTCAGTCGTTCATAAGGCTCTAGCTCTGAAGAAGGAGATTGAGATGTCAGAGTCAATTTTG
GGTGCTCAGCAGGCAGCGAACAATTTGCATGATCTCTGCCTTGAATCCGGGAATGCTGAGGCAGTACTTAGCTTAGTGCA
GCCATGGGAAGCTGATGATGACACAGTGAGGGTTCTGCTTTCAAATGTGGTACTCGAGGAAGATGGGATGCATGGAAAAG
GGCCGGCACTTGTGCTGTGTTCTCTTATCCTACCGAAGTTACTTGACCTTCAAAGAGCAGCTTCATCTGGTCTTCTTTCT
GCAGCATTAGATGTCTGCAAACGTCACCCAGCTGCTGCACTGGAGGCTGTCCTCTTCCCACTAGTTCTTAGAAAACAAGG
CCTGAATGCTCCTCAGTGCGATGTGCTCACACGGATTGTCAGGGACTGCATGCATCCTTTGCATGTCACCGCCTTCTGTC
ATAGGTTGCTTTCAGGGGAGGAGGGAGAGAGGAAACCGATTTGTATGCCTCAGCATCGGGAAAATATTGGCCGCGATTTG
GTCTGGACAGAATCTCTCTTTGCACTATTCTACAACATTCTCAGTCAAGACATTTGCCTAACACCAAGCACCATCGAGAA
GCTAGTGTACATGATTGATGATATGGCAATAAAGTTTCCAAAGTCGCTTAAATTTGGCAACTTTTTCCTGTGCTTCGTCT
CGAAGTGTTGGCATGAATGTAAGATTCACAGGGTTTTACTTGAGACAGCTGCCGAGACAACCAACACTTTTTTGACTAAA
GCTATTCTGGTCAAACTGCGGCCTGCTAATTGAAGTGATGTCTTGAGTGTTTAATGATAAACTCCTGGTGGGCTGCATGC
CATTCAGATTAACCAAGTATGTAATTGTTTGGAACACTG-TTTTGTTTGATTTTTTAAATGGACAGCTTTTGTAGTTCGA
GAAATCATTGCTTCATATATACAGAGTAGCAATT-ATTTACTATGAAAATGTTATTAACACAAAGTACATAATTTTGTTA
TGCACGACTCAAGTGCAACAA---TTGACTTTCGCAATGAATTTATGTTCAGTTAAGTATAGGATTTCTTGTAAGGGCTG
TCTTTGACTTGTGAAATGGACAGCTTCTGTAGTTCCAGAAACAATTGAACAACATGATG--------CATATACACAAAG
TAGCAATTAATTTACTCTCAAAAAGGCATTACCAAAAAAA-------TCTGTTATATATGACTCAAATGCAGCAAGATT-
GG-AGATTGTCATGAAATCTAGGATGTCCAGTATAAGAGAATGATTAAGCCAG--------TTTAATTTTAACCCGAGTG
GTAAAGCTGTTGCCTTGTGACCATGAGGTCACGGGTTCGAGTCCTGGAAACAGCCTCTTGCAGAAATGCAGGGAAAGGCT
GCGTACAAAAGACCCAAAGTGGTCGGACCCTTCCCCGGACCCTGCGCAAGCGGGAGCTACATGCACCGGGCTGCCCTAAT
CTTAACTGGAGTTTAAGTCTAACAATTATCCAATGGTCAATTTCAGTTCTACCTACCC-------------AAGACCATA
GTTCTCGATGTGGTATCTATGCATTTGATGCCTTAATGGTAGTTTGTTAAATTGTTATGCTCATATGA---TGTTTTTCT
ATCAGTGTAGGATTTGTTATTATATCGCTGTTAACCATGATTCTCTATCATAGGCACACAGATATGTTCCTGGTGCCCAG
GTCATGCGTTTTCAGATTCAGTTAGCTCATGAGTAGGTTCCGCTTCTTTCCC--CCTCAAACCGAGTAGTTTTTGCTCTT
GAACTAATCAGCCGTGGTCTCGTGGATTGGAGATATTTTCTAGCA-----------------------------------
-----------------------------------------------CATACATGTTTCCTGTTACTGTTTTGTTGCTAT
ACAAATATTCTGAGTTATATTTGATATGGCTTTTCATTAGCGTAGTCAGCGTGACTGCCAGTTTAAAATGCAAACAACTT
TAC--------TAAGCTCTGGGATACATTGTCTATTGTAGCTTTG---TATATTTCCATAGCATGA-
>chr7B_977
--------------------------------------------------------------------------------
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---CCAATTTGCAAGAGACCAGTTCCCATGGAGCCGTGGTTGCCGGTGCTCCGCCACCTGCTCGCCTCCTCCGCCCCCAA
CGCCGCCGCCTTCTCGTCCTCGAACAGCAGCCCCCGCTCTCCTCCTCCGGCCGCGGGCCTCCTCCGCCTCCTCCTCTCTC
CGGTGCCCACGCTCCCCGCCTCCGAACCCACGGCCGTCCTCTTCCAGACCCTCCCACCCTTGCTTCAGTCCCAGGCGCTT
TCCTTCCTGTCCTCCTCCGCCTCCCTCCTTGACCCGCTCCAGCTCCGCTCACTCGCCTCTCGCGTCCTTTCTGCTCCGCC
GGGCCGGTGTGACGAATTCTGGGTCCGCCGGGGCGCCCACCACCTGCTCGACGGATTGCCTGACAAAGACGTTCCTGATG
TCCCCTGGGAGTTCAACGAGGAGTTCCACGAGCCGCCGCCGTGGCTTAAAGCAGAGGCGGCACGGACACAGCCTGTCCTT
CCGTGGCTGCCTCTCGATTGCTGGAGCATGATGCCGGGTGGGGTCTGTGCCAGCCGGGATGGTTTAGAC---------GG
AGTTTGGTTGGAGTCTCTGGGGCTGGAGCAAGAAGAGTATTCGTTCATGC---AGGAGGTTGGGCGCGCTCCTTCTCCTC
CGGCTCCTCCACTAGGAAATTCAGTTGTCCACAGGGCTCTAGCTCTGAAGAAGGAAATTGAGATGGCAGAGTCAGTTTTG
GGTGCTCAGCAGGCAGCCAACAATTTGCATGATCTCTGCCTTGAATCCGGGAATGCTGAGGCGGTACTTACCTTAGTACA
GCCTTGGGAAGCTGATGATGACACAGTGAGGGTTCTGCTTTCAAATTTGGTACTTGAGGAAGATGCGATGCATGGAAAAG
GCCCGGCACTTGTGCTGTGTTCTCTTGCCCTACCAAAGTTACTTGACCTTCAAAGAGCAGCTTCATCTGGTCTTCTTTCT
GCTGCATTAGATGTCTGCAAACGTCACCCAGCTGCTGCACTGGAGGCTGTCCTCTTCCCACTAGTTCTTAGAAAACAAGG
CCTGAATGCTCCTCAGTGCGATGCGCTCACACGGATTGTCAAGGATTGCATGCATCCTTTGCATGTCACCGCCTTCTGTC
ATAGGTTGCTTTCAGGTGAGGAGAGAGAGCGGAAACCGATCTGTATGCCTCAGCATCGGGAAAATATTGGCTGCGATTTG
GTCTGGACAGAATCTCTCTTTGCACTATTCTACAACATTCTCAGTCAAGACATTTGCCTAACACCAAGCACCATCGAGAG
GCTAGTGTCCATGATTGATGATATGGCAATAAAGTTTCCAAAGTCGCTTAAATTTGGCAACTTTTTTCTGTGCTTCGTCT
CGAAGTGTTGGCATGTATGTAAGATTCACAGGGTTTTACTCGAGAGAGCTGCTGAGACAACCAACACTTTCTTGACTAAA
GCTATATTGGCCAAACTGCGGCCTGCTAATTGAAGTGATGTCTTGAGTGTTCAAAGATAAGCTCCTGGTGGGCTACTTGC
CATTCAGATTAACCAAGTATGTGACTGCATTGAAGGATTATTTTG--------TTTAAATGGACAGCTTTTGTAGTTCGA
GAAACCATTACTTC--ATATACAGCGTAGCAATCAATTTACTATGAAAATGTTATTAAGAAAAGGTACATAATTTTCTTA
TGCATGGCTCAAGTGCAACAAAGTTTGACTTTAGCAATGAATTTATGTTCAGTTAAGTTTACGATTTCTAGTAAGGGTTG
TCTTTGACTTTTAAAATGGACAGCTTGTGTAGTACCAGAAACAATTGAACAAC--GATGCATATAGCCATATACGCAAAG
TAGCAAGTAATTTACTATTAAAAAGGCATTTATAAAAATATAGAATTTCTGTTATATATGACTCAAATGCAGCAAGATT-
GGGAGATTGTCGTGAAATCCAGGATGTCCACAACAACAACAACAACAACAACAACAAGGCCTTTAGTCTTAACTGTAGTT
AACACT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TAACAATTATCCAGTTGTCAATTTCAGTTGTACCTACCCTACCCAAGAGGCCAAGACCATA
GGTTTCAATGTGATATGTATGCATCCGATGCCTTCATGTTAGTTTGTTAAATTGTTATGCTCATATGCATGTGTTTTTCT
ATCAGTGTAGGATTTGTTATTAGATCTCTGTTAACCATGATTCTCTGTCATAGGCACACAGATATGTTCCTGGTGCCCAG
CTCATGCG-TTTCAGATTCAGTTAGCTCATGAGTAGGTTCTGCTTTTCTTTTTTCCTTGAACCGAGTAGTTTCTGCTCTT
GAACAAATGAG--------TCGAGGATGTGAAATGTTTTCTAGTGCATACATGTTTCCTGTTACTGTTTCGTTGCTACAC
AACTATTCTGAGTCATATTTCACATGGCGTATCATTAGCGCAGTCGGCATACATGTTTCCTGTTACTGTTTCGTTGCTAC
ACAACTATTCTGAGTCATATTTCACATGGCGTATCATTAGCGCAGTCGGCGTGACTGCCGGTTTAAAATGCAAATAACTT
TACTAAGCTAGTAAGCTCTGGGATAAATTTTGCCTAAAGTGACTTTGTTATATTTCTATAGCATGAA
>SNPs
---S------------------------------------------------------------S---------S-----
-------------S------------------------S----------S------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------S-----S-----SS-S-SSS----------
-----------S--------S-----------------------------------------------------------
-------------------S------------------S-------------------S---------------------
-------S--------------------------------------------------------------------S---
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S-------------------------------------------------------------------------------
---------------------------------------------------S---------------S------------
--------S-----------------------------------------------------------------------
--------------------------------------------------S--------------------S--------
--------------------------------------------------------------------------------
-------------------------------------S-----------------------S------------------
--------------------S---------S---------------------S--S---------S---SSSSSSSSS--
----S----------------------------S-------------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S------------------------------S----------------------------------------
-------------------------------------------------------S--------------S---------
-----------------------S-----------------------------------S--------------------
------------------------------------------------S-----S-------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-----------------------S--------------------------S----------------
-------------------------S-------------------------------------S----------------
--------------------------------------------------------------------------------
----------------------------S-------------------------SS------------------------
----------------------------------------S---------------------------------------
----------------------------------------------------------------------S---------
-------------------------------------------S------------------------------------
------------------------------------------S-----------------------------------SS
--------------------------------S----S----S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
---------------S--------------------------------------------------S-------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S-----------------------------------------------------------
>forward_952
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------GAGTGGGCTGAACTTGTCCA--------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>reverse_2166
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-----CTGCTTTCAGGGGAGGAGAG-------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>forward_1551
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-----------TCTCGATTGTCGGAGCATGG-------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------
>reverse_2384
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------CTTTCTGTGCTTCGTCT
CGA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------
>forward_1880
--------------------------------------------------------------------------------
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--------------------ACACAGTGAGGGTTCTGCTG----------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>reverse_2959
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AG
GGAGATTGTCGTGAAATCCA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
